BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2521353.2.1
(1279 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF588070.1|BF588070 FM1_37_C12.b1_A003 Floral-Induced Me... 950 0.0
gb|BI246029.1|BI246029 IP1_66_G09.b1_A002 Immature pannicle... 638 0.0
gb|CX615573.1|CX615573 GABR1_21_A01.b1_A002 GA- or brassino... 565 e-159
gb|BF587512.1|BF587512 FM1_37_C12.g1_A003 Floral-Induced Me... 454 e-126
gb|CD222877.1|CD222877 CCC1_24_C07.g1_A007 Callus culture/c... 428 e-118
gb|BG158765.1|BG158765 RHIZ2_44_A05.b1_A003 Rhizome2 (RHIZ2... 404 e-111
gb|BI245542.1|BI245542 IP1_66_G09.g1_A002 Immature pannicle... 361 1e-097
gb|CF489987.1|CF489987 POL1_61_G01.g1_A002 Pollen Sorghum b... 345 6e-093
gb|BG357722.1|BG357722 OV2_29_E09.b1_A002 Ovary 2 (OV2) Sor... 280 3e-073
gb|CW142191.1|CW142191 104_533_11136722_148_34941_007 Sorgh... 224 2e-056
gb|CW378949.1|CW378949 fsbb001f057p05k0 Sorghum methylation... 216 4e-054
gb|CW142190.1|CW142190 104_533_11136722_116_34937_007 Sorgh... 208 9e-052
gb|CB925815.1|CB925815 ABA1_23_D08.g1_A012 Abscisic acid-tr... 200 2e-049
gb|CF485313.1|CF485313 POL1_30_F07.g1_A002 Pollen Sorghum b... 200 2e-049
gb|CB927535.1|CB927535 ABA1_26_H06.g1_A012 Abscisic acid-tr... 188 9e-046
gb|CW203847.1|CW203847 104_631_11186229_116_37092_085 Sorgh... 119 7e-025
gb|CW232895.1|CW232895 104_685_11213064_148_37363_084 Sorgh... 119 7e-025
gb|CW276614.1|CW276614 104_750_11405585_148_35398_073 Sorgh... 119 7e-025
gb|CW491852.1|CW491852 fsbb001f281o10f0 Sorghum methylation... 117 3e-024
gb|CW203848.1|CW203848 104_631_11186229_148_37093_085 Sorgh... 111 2e-022
gb|BG158692.1|BG158692 RHIZ2_44_A05.g1_A003 Rhizome2 (RHIZ2... 98 2e-018
gb|BG273430.1|BG273430 OV2_25_F02.b1_A002 Ovary 2 (OV2) Sor... 96 1e-017
gb|CW446397.1|CW446397 fsbb001f179a13k0 Sorghum methylation... 80 6e-013
gb|BG273295.1|BG273295 OV2_25_F02.g1_A002 Ovary 2 (OV2) Sor... 76 9e-012
gb|BG357409.1|BG357409 OV2_29_E09.g1_A002 Ovary 2 (OV2) Sor... 74 4e-011
gb|CW270755.1|CW270755 104_742_11402613_148_35334_085 Sorgh... 42 0.12
gb|CW268040.1|CW268040 104_738_11401067_116_35301_038 Sorgh... 40 0.49
gb|AW284046.1|AW284046 LG1_267_B04.g1_A002 Light Grown 1 (L... 40 0.49
gb|AW286428.1|AW286428 LG1_332_F05.g1_A002 Light Grown 1 (L... 40 0.49
gb|AW563298.1|AW563298 LG1_228_E05.g1_A002 Light Grown 1 (L... 40 0.49
gb|AW565359.1|AW565359 LG1_343_B11.g1_A002 Light Grown 1 (L... 40 0.49
gb|AW565417.1|AW565417 LG1_343_B07.g1_A002 Light Grown 1 (L... 40 0.49
gb|AW745289.1|AW745289 LG1_387_G04.g1_A002 Light Grown 1 (L... 40 0.49
gb|BE363908.1|BE363908 PI1_10_G02.b1_A002 Pathogen induced ... 40 0.49
gb|BE365371.1|BE365371 PI1_26_C09.g1_A002 Pathogen induced ... 40 0.49
gb|BE365921.1|BE365921 PI1_2_A05.g1_A002 Pathogen induced 1... 40 0.49
gb|BE365942.1|BE365942 PI1_2_C12.g1_A002 Pathogen induced 1... 40 0.49
gb|BE366584.1|BE366584 PI1_35_A05.g1_A002 Pathogen induced ... 40 0.49
gb|BE367385.1|BE367385 PI1_4_G12.g1_A002 Pathogen induced 1... 40 0.49
gb|BE367500.1|BE367500 PI1_8_B07.g1_A002 Pathogen induced 1... 40 0.49
gb|BE596491.1|BE596491 PI1_57_H09.g1_A002 Pathogen induced ... 40 0.49
gb|BE596604.1|BE596604 PI1_58_C09.g1_A002 Pathogen induced ... 40 0.49
gb|BE597247.1|BE597247 PI1_69_H10.g1_A002 Pathogen induced ... 40 0.49
gb|BE598524.1|BE598524 PI1_83_E02.g1_A002 Pathogen induced ... 40 0.49
gb|BE598595.1|BE598595 PI1_84_F03.g1_A002 Pathogen induced ... 40 0.49
gb|BE599014.1|BE599014 PI1_86_D02.g1_A002 Pathogen induced ... 40 0.49
gb|BE600300.1|BE600300 PI1_94_G01.g1_A002 Pathogen induced ... 40 0.49
gb|BE600359.1|BE600359 PI1_95_D09.g1_A002 Pathogen induced ... 40 0.49
gb|BE601223.1|BE601223 PI1_90_D11.g1_A002 Pathogen induced ... 40 0.49
gb|BE601376.1|BE601376 PI1_92_C02.g1_A002 Pathogen induced ... 40 0.49
gb|BM317995.1|BM317995 PI1_36_G09.g9_A002 Pathogen induced ... 40 0.49
gb|BM317997.1|BM317997 PI1_36_G11.g9_A002 Pathogen induced ... 40 0.49
gb|BM318085.1|BM318085 PI1_78_D01.g9_A002 Pathogen induced ... 40 0.49
gb|BM318308.1|BM318308 PI1_77_A09.g9_A002 Pathogen induced ... 40 0.49
gb|BM318339.1|BM318339 PI1_77_D12.g9_A002 Pathogen induced ... 40 0.49
gb|BM328076.1|BM328076 PIC1_20_H02.g1_A002 Pathogen-infecte... 40 0.49
gb|BM328503.1|BM328503 PIC1_30_A04.g1_A002 Pathogen-infecte... 40 0.49
gb|BM329094.1|BM329094 PIC1_33_C12.g1_A002 Pathogen-infecte... 40 0.49
gb|BM329290.1|BM329290 PIC1_35_G10.g1_A002 Pathogen-infecte... 40 0.49
gb|BM329575.1|BM329575 PIC1_40_G03.g1_A002 Pathogen-infecte... 40 0.49
gb|BM330228.1|BM330228 PIC1_48_H09.g1_A002 Pathogen-infecte... 40 0.49
gb|BM331030.1|BM331030 PIC1_68_G03.g1_A002 Pathogen-infecte... 40 0.49
gb|BM331691.1|BM331691 PIC1_59_A09.g1_A002 Pathogen-infecte... 40 0.49
gb|CD426350.1|CD426350 SA1_20_E08.b1_A002 Salicylic acid-tr... 40 0.49
gb|CD426788.1|CD426788 SA1_25_G05.b1_A002 Salicylic acid-tr... 40 0.49
gb|CD431288.1|CD431288 ETH1_8_D03.b1_A002 Ethylene-treated ... 40 0.49
gb|CF072317.1|CF072317 FE1_2_E11.b1_A002 Iron-deficient see... 40 0.49
gb|CF426857.1|CF426857 PH1_2_H06.b1_A002 Phosphorous-defici... 40 0.49
gb|CF428834.1|CF428834 PH1_18_A11.b1_A002 Phosphorous-defic... 40 0.49
gb|CF430441.1|CF430441 PH1_28_G11.b1_A002 Phosphorous-defic... 40 0.49
gb|CF430727.1|CF430727 NIT1_2_G09.b1_A002 Nitrogen-deficien... 40 0.49
gb|CF432081.1|CF432081 NIT1_14_H10.b1_A002 Nitrogen-deficie... 40 0.49
gb|CN123813.1|CN123813 RHOH1_1_A03.b1_A002 Acid- and alkali... 40 0.49
gb|CN123837.1|CN123837 RHOH1_1_C04.b1_A002 Acid- and alkali... 40 0.49
gb|CN135654.1|CN135654 OX1_38_E05.b1_A002 Oxidatively-stres... 40 0.49
gb|CN138925.1|CN138925 OX1_15_B01.b1_A002 Oxidatively-stres... 40 0.49
gb|CN145899.1|CN145899 WOUND1_36_C02.b1_A002 Wounded leaves... 40 0.49
gb|CX606122.1|CX606122 ANR1_1_F08.b1_A002 Anaerobic roots S... 40 0.49
gb|CX606605.1|CX606605 ANR1_4_A11.b1_A002 Anaerobic roots S... 40 0.49
gb|CX607395.1|CX607395 ANR1_8_H07.b1_A002 Anaerobic roots S... 40 0.49
gb|CX608213.1|CX608213 ANR1_37_G09.b1_A002 Anaerobic roots ... 40 0.49
gb|CX609657.1|CX609657 ANR1_14_A09.b1_A002 Anaerobic roots ... 40 0.49
gb|CX609666.1|CX609666 ANR1_14_B07.b1_A002 Anaerobic roots ... 40 0.49
gb|CX611328.1|CX611328 ANR1_24_B08.b1_A002 Anaerobic roots ... 40 0.49
gb|CX611562.1|CX611562 ANR1_25_H08.b1_A002 Anaerobic roots ... 40 0.49
gb|CX616322.1|CX616322 GABR1_27_F03.b1_A002 GA- or brassino... 40 0.49
gb|CX617998.1|CX617998 GABR1_37_D04.b1_A002 GA- or brassino... 40 0.49
gb|CX618903.1|CX618903 GABR1_42_H03.b1_A002 GA- or brassino... 40 0.49
gb|CX619838.1|CX619838 GABR1_48_D12.b1_A002 GA- or brassino... 40 0.49
gb|CX620022.1|CX620022 GABR1_49_H07.b1_A002 GA- or brassino... 40 0.49
gb|CX620946.1|CX620946 GABR1_55_B11.b1_A002 GA- or brassino... 40 0.49
gb|CX621485.1|CX621485 GABR1_58_H08.b1_A002 GA- or brassino... 40 0.49
gb|CX622084.1|CX622084 GABR1_62_A02.b2_A002 GA- or brassino... 40 0.49
>gb|BF588070.1|BF588070 FM1_37_C12.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 594
Score = 950 bits (479), Expect = 0.0
Identities = 554/579 (95%)
Strand = Plus / Minus
Query: 652 ctgtcaaacttgtatccatggagtagggactctgccaagatggtctttgtagacgtagcc 711
|||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 594 ctgtcaaatttgtatccatggagcagggactctgccaagatggtctttgtagatgtagcc 535
Query: 712 aggcagccaaccatggcagcacagaaaccgaaaatgttgaagctaagctctgtcaccgaa 771
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 534 aggcagccaaccatggcagcacaaaaaccaaaaatgttgaagctaagctctgtcaccgaa 475
Query: 772 gtcaggagtattccgccaactatagggaccagcgaagcccatatgcgccactcgaaatgc 831
|||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 474 gtcaggagtattcccccaactatggggacgagcgaagcccatatgcgccactcgaaatgc 415
Query: 832 ttgctccagactagccactgcagaataactgtggttgcaggagtgaaagatttgattgtc 891
|| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 ttattccagactagccattgcagaataactgtggttgcaggagtgaaagatttgattgtc 355
Query: 892 tgcatgaaggagactgggatgtagcgcaagctgacatttcccagcacaatgtttatgcag 951
||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 354 tgcatgaaggagactggaatgtagcgcaggctcacatttcccagcacaatgtttatgcag 295
Query: 952 aagacgaaggacattggaaatatccttttccagcggtcctccggttcaacttgaatcagg 1011
|||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 294 aagacgaacgacattggaaatatccgcttccagcggtcctccggttcaacttgaatcagc 235
Query: 1012 ggtttcgccttgaggacatggattgcaatgtaagctccaatggaagagcagatgaagtgg 1071
||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 234 ggtttcgccttaagcacatggattgcaatgtaagctccaattgaagagcagatgaagtgg 175
Query: 1072 acgcaggacacggtgagagggaacttgaaatccagtttctggaagatccacttgttcatg 1131
|| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 174 acacaggacacggtgagaggaaacttgaaatccagtttctggaagatccacttgttcatg 115
Query: 1132 atgatgacagtgacgttgaagccccaccactggaggatggcgagcaccgcgcgcagggtg 1191
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 atgatgacggtgacgttgaagccccaccactggaggatggcgagcaccgcgcgcagggtg 55
Query: 1192 cccaggccggccggcgccttgccgccgtcctccatctct 1230
||||||| |||||||||||||||||||||||||||||||
Sbjct: 54 cccaggctggccggcgccttgccgccgtcctccatctct 16
>gb|BI246029.1|BI246029 IP1_66_G09.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 500
Score = 638 bits (322), Expect = 0.0
Identities = 364/378 (96%)
Strand = Plus / Minus
Query: 853 agaataactgtggttgcaggagtgaaagatttgattgtctgcatgaaggagactgggatg 912
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 500 agaataactgtggttgcaggagtgaaagatttgattgtctgcatgaaggagactggaatg 441
Query: 913 tagcgcaagctgacatttcccagcacaatgtttatgcagaagacgaaggacattggaaat 972
||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 440 tagcgcaggctcacatttcccagcacaatgtttatgcagaagacgaacgacattggaaat 381
Query: 973 atccttttccagcggtcctccggttcaacttgaatcaggggtttcgccttgaggacatgg 1032
|||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 380 atccgcttccagcggtcctccggttcaacttgaatcagcggtttcgccttaagcacatgg 321
Query: 1033 attgcaatgtaagctccaatggaagagcagatgaagtggacgcaggacacggtgagaggg 1092
|||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 320 attgcaatgtaagctccaattgaagagcagatgaagtggacacaggacacggtgagagga 261
Query: 1093 aacttgaaatccagtttctggaagatccacttgttcatgatgatgacagtgacgttgaag 1152
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 260 aacttgaaatccagtttctggaagatccacttgttcatgatgatgacggtgacgttgaag 201
Query: 1153 ccccaccactggaggatggcgagcaccgcgcgcagggtgcccaggccggccggcgccttg 1212
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 200 ccccaccactggaggatggcgagcaccgcgcgcagggtgcccaggctggccggcgccttg 141
Query: 1213 ccgccgtcctccatctct 1230
||||||||||||||||||
Sbjct: 140 ccgccgtcctccatctct 123
>gb|CX615573.1|CX615573 GABR1_21_A01.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_21_A01_A002 3', mRNA sequence
Length = 709
Score = 565 bits (285), Expect = e-159
Identities = 357/381 (93%)
Strand = Plus / Minus
Query: 254 gcgctgttcctagactccctggggctgcagcctggcgctgcgagatcagatgcctcacat 313
||||||||||| |||||||||||||||||||||| || || ||||||||||||||||| |
Sbjct: 381 gcgctgttcctggactccctggggctgcagcctgccgttgtgagatcagatgcctcacgt 322
Query: 314 agccatagaaagtgcaaccaaccagggtgattccacacccgattgcattcattgcagaga 373
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 321 agccatagaaagtgcaaccaaccagggtgattccacatccaattgcattcattgcagaga 262
Query: 374 ttggattccggaagatcgaccacgacactaacactgccaccgcgactttaaggttgcctg 433
||||||||||||||||| |||| ||||||||||| |||||||| |||||||||||||| |
Sbjct: 261 ttggattccggaagatcaaccatgacactaacacagccaccgcaactttaaggttgccag 202
Query: 434 caacgttgaacgtcactgctgttgttgaatggatgacgtagaagatggagaagttaaggc 493
|||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 201 caacgttgaaagtcactgctgtcgttgaatggatgacatagaagatggagaagttaaggc 142
Query: 494 agaacgcaagcacccccgaacctaggatgatagtcagcgcaggaacgatggaatcatgtg 553
| |||||||||||||| ||||||||||||||| ||| ||||| |||||||||||||||||
Sbjct: 141 aaaacgcaagcacccctgaacctaggatgataatcaacgcagaaacgatggaatcatgtg 82
Query: 554 tgtagaaccagttcattacacctcctccttcaagcaccatcgctggtagagccagtatca 613
||||||||||||| |||||||| ||||||||||||| ||| |||||||||||||||||||
Sbjct: 81 tgtagaaccagttgattacaccacctccttcaagcaacattgctggtagagccagtatca 22
Query: 614 tggtggcaaagggtgccatgt 634
|||||||||||||||||||||
Sbjct: 21 tggtggcaaagggtgccatgt 1
Score = 69.9 bits (35), Expect = 6e-010
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 131 cacgcacgagtacatatataattctctcttcaacaagtgaaga 173
|||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 615 cacgcatgagtacatatataattctctcttcaagaagtgaaga 573
Score = 56.0 bits (28), Expect = 8e-006
Identities = 54/62 (87%), Gaps = 3/62 (4%)
Strand = Plus / Minus
Query: 189 ttgctaaaccttttcttgcttctcgtccacaacaaggggaagcatctccgtctgattcct 248
||||||||||||||||||||| | |||| |||||||||||||| ||| ||||||| ||
Sbjct: 452 ttgctaaaccttttcttgcttgttgtcc---acaaggggaagcatttccatctgatttct 396
Query: 249 tg 250
||
Sbjct: 395 tg 394
Score = 54.0 bits (27), Expect = 3e-005
Identities = 61/71 (85%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 45 attctgatgctggcgattagtgtcacaaatggaaggaggaaacgatgcttgtacgaagtt 104
|||||||| |||| || || | |||||||||||||||||||| ||||| | || ||||||
Sbjct: 707 attctgatactggagactaatatcacaaatggaaggaggaaaagatgc-tataagaagtt 649
Query: 105 ccagtttacta 115
||| |||||||
Sbjct: 648 ccaatttacta 638
>gb|BF587512.1|BF587512 FM1_37_C12.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 644
Score = 454 bits (229), Expect = e-126
Identities = 286/305 (93%)
Strand = Plus / Minus
Query: 254 gcgctgttcctagactccctggggctgcagcctggcgctgcgagatcagatgcctcacat 313
||||||||||| |||||||||||||||||||||| || || ||||||||||||||||| |
Sbjct: 305 gcgctgttcctggactccctggggctgcagcctgccgttgtgagatcagatgcctcacgt 246
Query: 314 agccatagaaagtgcaaccaaccagggtgattccacacccgattgcattcattgcagaga 373
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 245 agccatagaaagtgcaaccaaccagggtgattccacatccaattgcattcattgcagaga 186
Query: 374 ttggattccggaagatcgaccacgacactaacactgccaccgcgactttaaggttgcctg 433
||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||| |
Sbjct: 185 ttggattccggaagatcaaccatgacactaacacagccaccgcgactttaaggttgccag 126
Query: 434 caacgttgaacgtcactgctgttgttgaatggatgacgtagaagatggagaagttaaggc 493
|||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 125 caacgttgaaagtcactgctgtcgttgaatggatgacatagaagatggagaagttaaggc 66
Query: 494 agaacgcaagcacccccgaacctaggatgatagtcagcgcaggaacgatggaatcatgtg 553
| |||||||||||||| ||||||||||||||| ||| ||||| |||||||||||||||||
Sbjct: 65 aaaacgcaagcacccctgaacctaggatgataatcaacgcagaaacgatggaatcatgtg 6
Query: 554 tgtag 558
|||||
Sbjct: 5 tgtag 1
Score = 63.9 bits (32), Expect = 3e-008
Identities = 55/62 (88%), Gaps = 3/62 (4%)
Strand = Plus / Minus
Query: 189 ttgctaaaccttttcttgcttctcgtccacaacaaggggaagcatctccgtctgattcct 248
||||||||||||||||||||| |||||| |||||||||||||| ||| ||||||| ||
Sbjct: 376 ttgctaaaccttttcttgcttgtcgtcc---acaaggggaagcatttccatctgatttct 320
Query: 249 tg 250
||
Sbjct: 319 tg 318
Score = 61.9 bits (31), Expect = 1e-007
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 139 agtacatatataattctctcttcaacaagtgaaga 173
||||||||||||||||||||||||| |||||||||
Sbjct: 532 agtacatatataattctctcttcaagaagtgaaga 498
Score = 42.1 bits (21), Expect = 0.12
Identities = 40/45 (88%), Gaps = 1/45 (2%)
Strand = Plus / Minus
Query: 71 aaatggaaggaggaaacgatgcttgtacgaagttccagtttacta 115
|||||||||||||||| ||||| | || ||||||||| |||||||
Sbjct: 606 aaatggaaggaggaaaagatgc-tataagaagttccaatttacta 563
>gb|CD222877.1|CD222877 CCC1_24_C07.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_24_C07_A007 5', mRNA sequence
Length = 663
Score = 428 bits (216), Expect = e-118
Identities = 447/524 (85%)
Strand = Plus / Minus
Query: 661 ttgtatccatggagtagggactctgccaagatggtctttgtagacgtagccaggcagcca 720
|||||||||||||| || ||||||||||| ||||||||||| || || |||||||||||
Sbjct: 658 ttgtatccatggagcagtgactctgccaaaatggtctttgtggatgtggccaggcagccc 599
Query: 721 accatggcagcacagaaaccgaaaatgttgaagctaagctctgtcaccgaagtcaggagt 780
|||||||| || ||||| || || |||||||||| ||||| || ||||||||||| ||
Sbjct: 598 accatggcggcgcagaagccaaacgtgttgaagctcagctcagttaccgaagtcagaaga 539
Query: 781 attccgccaactatagggaccagcgaagcccatatgcgccactcgaaatgcttgctccag 840
|| || || || ||||||| || |||||||| |||||||| ||||| | || |||||
Sbjct: 538 atgcctcccacaatagggatcaaagaagcccagatgcgccattcgaagtatttcctccac 479
Query: 841 actagccactgcagaataactgtggttgcaggagtgaaagatttgattgtctgcatgaag 900
|| | |||||| ||||| |||||||||||||||||||||||||| | ||||||||||||
Sbjct: 478 accaaccactgaagaatcactgtggttgcaggagtgaaagattttacggtctgcatgaag 419
Query: 901 gagactgggatgtagcgcaagctgacatttcccagcacaatgtttatgcagaagacgaag 960
||||| || ||||| |||||||| ||||| ||||||||||||||||||||||| |||||
Sbjct: 418 gagaccggaatgtaccgcaagctcacattccccagcacaatgtttatgcagaacacgaat 359
Query: 961 gacattggaaatatccttttccagcggtcctccggttcaacttgaatcaggggtttcgcc 1020
|||||||| ||||||||| |||| |||||||||| |||| | ||||| || || |
Sbjct: 358 gacattgggaatatccttctccatcggtcctccgtggcaacctcgatcagtggctttgtt 299
Query: 1021 ttgaggacatggattgcaatgtaagctccaatggaagagcagatgaagtggacgcaggac 1080
|| || || | |||||| ||||| ||||| || |||||||| |||||||||||||| |||
Sbjct: 298 ttcagaactttgattgcgatgtaggctccgatagaagagcatatgaagtggacgcacgac 239
Query: 1081 acggtgagagggaacttgaaatccagtttctggaagatccacttgttcatgatgatgaca 1140
|| || |||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 238 accgtcagagggaacttgaactccagtttctggaagatccacttgttgatgatgatgacg 179
Query: 1141 gtgacgttgaagccccaccactggaggatggcgagcaccgcgcg 1184
||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 178 gtgacgttgaatccccaccactggaggatggcgagcacggcgcg 135
>gb|BG158765.1|BG158765 RHIZ2_44_A05.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 376
Score = 404 bits (204), Expect = e-111
Identities = 231/240 (96%)
Strand = Plus / Minus
Query: 991 tccggttcaacttgaatcaggggtttcgccttgaggacatggattgcaatgtaagctcca 1050
|||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||
Sbjct: 376 tccggttcaacttgaatcagcggtttcgccttaagcacatggattgcaatgtaagctcca 317
Query: 1051 atggaagagcagatgaagtggacgcaggacacggtgagagggaacttgaaatccagtttc 1110
|| ||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||
Sbjct: 316 attgaagagcagatgaagtgcacacaggacacggtgagaggaaacttgaaatccagtttc 257
Query: 1111 tggaagatccacttgttcatgatgatgacagtgacgttgaagccccaccactggaggatg 1170
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 256 tggaagatccacttgttcatgatgatgacggtgacgttgaagccccaccactggaggatg 197
Query: 1171 gcgagcaccgcgcgcagggtgcccaggccggccggcgccttgccgccgtcctccatctct 1230
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 196 gcgagcaccgcgcgcagggtgcccaggctggccggcgccttgccgccgtcctccatctct 137
>gb|BI245542.1|BI245542 IP1_66_G09.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 622
Score = 361 bits (182), Expect = 1e-097
Identities = 230/246 (93%)
Strand = Plus / Minus
Query: 254 gcgctgttcctagactccctggggctgcagcctggcgctgcgagatcagatgcctcacat 313
||||||||||| |||||||||||||||||||||| || || ||||||||||||||||| |
Sbjct: 246 gcgctgttcctggactccctggggctgcagcctgccgttgtgagatcagatgcctcacgt 187
Query: 314 agccatagaaagtgcaaccaaccagggtgattccacacccgattgcattcattgcagaga 373
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 186 agccatagaaagtgcaaccaaccagggtgattccacatccaattgcattcattgcagaga 127
Query: 374 ttggattccggaagatcgaccacgacactaacactgccaccgcgactttaaggttgcctg 433
||||||||||||||||| |||| ||||||||||| |||||||| |||||||||||||| |
Sbjct: 126 ttggattccggaagatcaaccatgacactaacacagccaccgcaactttaaggttgccag 67
Query: 434 caacgttgaacgtcactgctgttgttgaatggatgacgtagaagatggagaagttaaggc 493
|||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 66 caacgttgaaagtcactgctgtcgttgaatggatgacatagaagatggagaagttaaggc 7
Query: 494 agaacg 499
| ||||
Sbjct: 6 aaaacg 1
Score = 69.9 bits (35), Expect = 6e-010
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 131 cacgcacgagtacatatataattctctcttcaacaagtgaaga 173
|||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 480 cacgcatgagtacatatataattctctcttcaagaagtgaaga 438
Score = 56.0 bits (28), Expect = 8e-006
Identities = 54/62 (87%), Gaps = 3/62 (4%)
Strand = Plus / Minus
Query: 189 ttgctaaaccttttcttgcttctcgtccacaacaaggggaagcatctccgtctgattcct 248
||||||||||||||||||||| | |||| |||||||||||||| ||| ||||||| ||
Sbjct: 317 ttgctaaaccttttcttgcttgttgtcc---acaaggggaagcatttccatctgatttct 261
Query: 249 tg 250
||
Sbjct: 260 tg 259
Score = 54.0 bits (27), Expect = 3e-005
Identities = 61/71 (85%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 45 attctgatgctggcgattagtgtcacaaatggaaggaggaaacgatgcttgtacgaagtt 104
|||||||| |||| || || | |||||||||||||||||||| ||||| | || ||||||
Sbjct: 572 attctgatactggagactaatatcacaaatggaaggaggaaaagatgc-tataagaagtt 514
Query: 105 ccagtttacta 115
||| |||||||
Sbjct: 513 ccaatttacta 503
>gb|CF489987.1|CF489987 POL1_61_G01.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_61_G01_A002 5', mRNA sequence
Length = 592
Score = 345 bits (174), Expect = 6e-093
Identities = 375/441 (85%), Gaps = 2/441 (0%)
Strand = Plus / Minus
Query: 746 tgttgaagctaagctctgtcaccgaagtcaggagtattccgccaactatagggaccagcg 805
|||||||||| ||||| || ||||||||||| || || || || || ||||||| || |
Sbjct: 577 tgttgaagctcagctcagttaccgaagtcagaagaatgccacccacaatagggatcaaag 518
Query: 806 aagcccatatgcgccactcgaaatgcttgctccaga--ctagccactgcagaataactgt 863
||||||| |||||||| ||||| | || ||||| | | |||||| ||||| |||||
Sbjct: 517 aagcccagatgcgccattcgaagtatttcctccaccaccaacccactgaagaatcactgt 458
Query: 864 ggttgcaggagtgaaagatttgattgtctgcatgaaggagactgggatgtagcgcaagct 923
||||||||||||||||||||| || ||||||||||||||||| || ||||| ||||||||
Sbjct: 457 ggttgcaggagtgaaagattttatggtctgcatgaaggagaccggaatgtaccgcaagct 398
Query: 924 gacatttcccagcacaatgtttatgcagaagacgaaggacattggaaatatccttttcca 983
||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||| ||||
Sbjct: 397 cacattccccagcacaatgtttatgcagaacacgaatgacattgggaatatccttctcca 338
Query: 984 gcggtcctccggttcaacttgaatcaggggtttcgccttgaggacatggattgcaatgta 1043
|||||||||| |||| | ||||| || || | || || || | |||||| |||||
Sbjct: 337 tcggtcctccgtggcaacctcgatcagtggctttgttttcagaactttgattgcgatgta 278
Query: 1044 agctccaatggaagagcagatgaagtggacgcaggacacggtgagagggaacttgaaatc 1103
||||| || |||||||| |||||||||||||| ||||| || |||||||||||||| ||
Sbjct: 277 ggctccgatagaagagcatatgaagtggacgcacgacaccgtcagagggaacttgaactc 218
Query: 1104 cagtttctggaagatccacttgttcatgatgatgacagtgacgttgaagccccaccactg 1163
|||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||
Sbjct: 217 cagtttctggaagatccacttgttgatgatgatgacggtgacgttgaatccccaccactg 158
Query: 1164 gaggatggcgagcaccgcgcg 1184
||||||||||||||| |||||
Sbjct: 157 gaggatggcgagcacggcgcg 137
>gb|BG357722.1|BG357722 OV2_29_E09.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 602
Score = 280 bits (141), Expect = 3e-073
Identities = 255/293 (87%)
Strand = Plus / Minus
Query: 892 tgcatgaaggagactgggatgtagcgcaagctgacatttcccagcacaatgtttatgcag 951
|||||||||||||| || ||||| |||||||| ||||| |||||||||||||||||||||
Sbjct: 602 tgcatgaaggagaccggaatgtaccgcaagctcacattccccagcacaatgtttatgcag 543
Query: 952 aagacgaaggacattggaaatatccttttccagcggtcctccggttcaacttgaatcagg 1011
|| ||||| |||||||| ||||||||| |||| |||||||||| |||| | |||||
Sbjct: 542 aacacgaatgacattgggaatatccttctccatcggtcctccgtggcaacctcgatcagt 483
Query: 1012 ggtttcgccttgaggacatggattgcaatgtaagctccaatggaagagcagatgaagtgg 1071
|| || | || || || | |||||| ||||| ||||| || |||||||| |||||||||
Sbjct: 482 ggctttgttttcagaactttgattgcgatgtaggctccgatagaagagcatatgaagtgg 423
Query: 1072 acgcaggacacggtgagagggaacttgaaatccagtttctggaagatccacttgttcatg 1131
||||| ||||| || |||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 422 acgcacgacaccgtcagagggaacttgaactccagtttctggaagatccacttgttgatg 363
Query: 1132 atgatgacagtgacgttgaagccccaccactggaggatggcgagcaccgcgcg 1184
|||||||| ||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 362 atgatgacggtgacgttgaatccccaccactggaggatggcgagcacggcgcg 310
>gb|CW142191.1|CW142191 104_533_11136722_148_34941_007 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11136722, DNA
sequence
Length = 712
Score = 224 bits (113), Expect = 2e-056
Identities = 119/121 (98%)
Strand = Plus / Plus
Query: 1110 ctggaagatccacttgttcatgatgatgacagtgacgttgaagccccaccactggaggat 1169
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 229 ctggaagatccacttgttcatgatgatgacggtgacgttgaagccccaccactggaggat 288
Query: 1170 ggcgagcaccgcgcgcagggtgcccaggccggccggcgccttgccgccgtcctccatctc 1229
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 289 ggcgagcaccgcgcgcagggtgcccaggctggccggcgccttgccgccgtcctccatctc 348
Query: 1230 t 1230
|
Sbjct: 349 t 349
>gb|CW378949.1|CW378949 fsbb001f057p05k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f057p05, DNA
sequence
Length = 769
Score = 216 bits (109), Expect = 4e-054
Identities = 217/253 (85%)
Strand = Plus / Plus
Query: 860 ctgtggttgcaggagtgaaagatttgattgtctgcatgaaggagactgggatgtagcgca 919
||||||||||||||||||||||||| || ||||||||||||||||| || ||||| ||||
Sbjct: 406 ctgtggttgcaggagtgaaagattttatggtctgcatgaaggagaccggaatgtaccgca 465
Query: 920 agctgacatttcccagcacaatgtttatgcagaagacgaaggacattggaaatatccttt 979
|||| ||||| ||||||||||||||||||||||| ||||| |||||||| |||||||||
Sbjct: 466 agctcacattccccagcacaatgtttatgcagaacacgaatgacattgggaatatccttc 525
Query: 980 tccagcggtcctccggttcaacttgaatcaggggtttcgccttgaggacatggattgcaa 1039
|||| |||||||||| |||| | ||||| || || | || || || | |||||| |
Sbjct: 526 tccatcggtcctccgtggcaacctcgatcagtggctttgttttcagaactttgattgcga 585
Query: 1040 tgtaagctccaatggaagagcagatgaagtggacgcaggacacggtgagagggaacttga 1099
|||| ||||| || |||||||| |||||||||||||| ||||| || |||||||||||||
Sbjct: 586 tgtaggctccgatagaagagcatatgaagtggacgcacgacaccgtcagagggaacttga 645
Query: 1100 aatccagtttctg 1112
| |||||||||||
Sbjct: 646 actccagtttctg 658
Score = 119 bits (60), Expect = 7e-025
Identities = 147/176 (83%)
Strand = Plus / Plus
Query: 652 ctgtcaaacttgtatccatggagtagggactctgccaagatggtctttgtagacgtagcc 711
||||| || |||||||||||||| || ||||||||||| ||||||||||| || || |||
Sbjct: 83 ctgtcgaatttgtatccatggagcagtgactctgccaaaatggtctttgtggatgtggcc 142
Query: 712 aggcagccaaccatggcagcacagaaaccgaaaatgttgaagctaagctctgtcaccgaa 771
|||||||| |||||||| || ||||| || || |||||||||| ||||| || ||||||
Sbjct: 143 aggcagcccaccatggcggcgcagaagccaaacgtgttgaagctcagctcagttaccgaa 202
Query: 772 gtcaggagtattccgccaactatagggaccagcgaagcccatatgcgccactcgaa 827
||||| || || || || || ||||||| || |||||||| |||||||| |||||
Sbjct: 203 gtcagaagaatgcctcccacaatagggatcaaagaagcccagatgcgccattcgaa 258
>gb|CW142190.1|CW142190 104_533_11136722_116_34937_007 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11136722, DNA
sequence
Length = 692
Score = 208 bits (105), Expect = 9e-052
Identities = 117/121 (96%)
Strand = Plus / Minus
Query: 1110 ctggaagatccacttgttcatgatgatgacagtgacgttgaagccccaccactggaggat 1169
|||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 687 ctggaagatccactgtttcatgatgatgacggtgacgttgaagccccaccactggaggat 628
Query: 1170 ggcgagcaccgcgcgcagggtgcccaggccggccggcgccttgccgccgtcctccatctc 1229
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 627 ggcgagcaccgcgcgcagggtgcccaggctggccggcgccttgccgccgtcctccatctc 568
Query: 1230 t 1230
|
Sbjct: 567 t 567
>gb|CB925815.1|CB925815 ABA1_23_D08.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_23_D08_A012 5', mRNA sequence
Length = 610
Score = 200 bits (101), Expect = 2e-049
Identities = 140/153 (91%)
Strand = Plus / Minus
Query: 1032 gattgcaatgtaagctccaatggaagagcagatgaagtggacgcaggacacggtgagagg 1091
|||||| ||||| ||||| || |||||||| |||||||||||||| ||||| || |||||
Sbjct: 572 gattgcgatgtaggctccgatagaagagcatatgaagtggacgcacgacaccgtcagagg 513
Query: 1092 gaacttgaaatccagtttctggaagatccacttgttcatgatgatgacagtgacgttgaa 1151
||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 512 gaacttgaactccagtttctggaagatccacttgttgatgatgatgacggtgacgttgaa 453
Query: 1152 gccccaccactggaggatggcgagcaccgcgcg 1184
|||||||||||||||||||||||||| |||||
Sbjct: 452 tccccaccactggaggatggcgagcacggcgcg 420
>gb|CF485313.1|CF485313 POL1_30_F07.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_30_F07_A002 5', mRNA sequence
Length = 647
Score = 200 bits (101), Expect = 2e-049
Identities = 140/153 (91%)
Strand = Plus / Minus
Query: 1032 gattgcaatgtaagctccaatggaagagcagatgaagtggacgcaggacacggtgagagg 1091
|||||| ||||| ||||| || |||||||| |||||||||||||| ||||| || |||||
Sbjct: 510 gattgcgatgtaggctccgatagaagagcatatgaagtggacgcacgacaccgtcagagg 451
Query: 1092 gaacttgaaatccagtttctggaagatccacttgttcatgatgatgacagtgacgttgaa 1151
||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 450 gaacttgaactccagtttctggaagatccacttgttgatgatgatgacggtgacgttgaa 391
Query: 1152 gccccaccactggaggatggcgagcaccgcgcg 1184
|||||||||||||||||||||||||| |||||
Sbjct: 390 tccccaccactggaggatggcgagcacggcgcg 358
Score = 119 bits (60), Expect = 7e-025
Identities = 90/100 (90%)
Strand = Plus / Minus
Query: 895 atgaaggagactgggatgtagcgcaagctgacatttcccagcacaatgtttatgcagaag 954
||||||||||| || ||||| |||||||| ||||| |||||||||||||||||||||||
Sbjct: 647 atgaaggagaccggaatgtaccgcaagctcacattccccagcacaatgtttatgcagaac 588
Query: 955 acgaaggacattggaaatatccttttccagcggtcctccg 994
||||| |||||||| ||||||||| |||| ||||||||||
Sbjct: 587 acgaatgacattgggaatatccttctccatcggtcctccg 548
>gb|CB927535.1|CB927535 ABA1_26_H06.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_26_H06_A012 5', mRNA sequence
Length = 624
Score = 188 bits (95), Expect = 9e-046
Identities = 122/131 (93%)
Strand = Plus / Minus
Query: 1054 gaagagcagatgaagtggacgcaggacacggtgagagggaacttgaaatccagtttctgg 1113
|||||||| |||||||||||||| ||||| || |||||||||||||| ||||||||||||
Sbjct: 621 gaagagcatatgaagtggacgcacgacaccgtcagagggaacttgaactccagtttctgg 562
Query: 1114 aagatccacttgttcatgatgatgacagtgacgttgaagccccaccactggaggatggcg 1173
|||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 561 aagatccacttgttgatgatgatgacggtgacgttgaatccccaccactggaggatggcg 502
Query: 1174 agcaccgcgcg 1184
||||| |||||
Sbjct: 501 agcacggcgcg 491
>gb|CW203847.1|CW203847 104_631_11186229_116_37092_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11186229, DNA
sequence
Length = 671
Score = 119 bits (60), Expect = 7e-025
Identities = 147/176 (83%)
Strand = Plus / Minus
Query: 652 ctgtcaaacttgtatccatggagtagggactctgccaagatggtctttgtagacgtagcc 711
||||| || |||||||||||||| || ||||||||||| ||||||||||| || || |||
Sbjct: 226 ctgtcgaatttgtatccatggagcagtgactctgccaaaatggtctttgtggatgtggcc 167
Query: 712 aggcagccaaccatggcagcacagaaaccgaaaatgttgaagctaagctctgtcaccgaa 771
|||||||| |||||||| || ||||| || || |||||||||| ||||| || ||||||
Sbjct: 166 aggcagcccaccatggcggcgcagaagccaaacgtgttgaagctcagctcagttaccgaa 107
Query: 772 gtcaggagtattccgccaactatagggaccagcgaagcccatatgcgccactcgaa 827
||||| || || || || || ||||||| || |||||||| |||||||| |||||
Sbjct: 106 gtcagaagaatgcctcccacaatagggatcaaagaagcccagatgcgccattcgaa 51
Score = 111 bits (56), Expect = 2e-022
Identities = 128/152 (84%)
Strand = Plus / Minus
Query: 361 ttcattgcagagattggattccggaagatcgaccacgacactaacactgccaccgcgact 420
||||| || ||||| || |||||||||||| ||||||||| | ||| ||||| || ||
Sbjct: 637 ttcatggccgagatggggttccggaagatcatccacgacaccagcaccgccacggccacc 578
Query: 421 ttaaggttgcctgcaacgttgaacgtcactgctgttgttgaatggatgacgtagaagatg 480
|| |||||||| || |||||||||||||| || || || || ||||| ||||||||||||
Sbjct: 577 ttgaggttgccggccacgttgaacgtcacggccgtcgtcgagtggatcacgtagaagatg 518
Query: 481 gagaagttaaggcagaacgcaagcacccccga 512
|||||||| |||||||| || |||||||||||
Sbjct: 517 gagaagttgaggcagaaggccagcacccccga 486
Score = 58.0 bits (29), Expect = 2e-006
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 610 atcatggtggcaaagggtgccatgtagtacaccgtgttaatgctg 654
||||| || |||||||| |||||||||||||||||||| ||||||
Sbjct: 388 atcatcgtcgcaaagggagccatgtagtacaccgtgttgatgctg 344
>gb|CW232895.1|CW232895 104_685_11213064_148_37363_084 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11213064, DNA
sequence
Length = 642
Score = 119 bits (60), Expect = 7e-025
Identities = 147/176 (83%)
Strand = Plus / Minus
Query: 652 ctgtcaaacttgtatccatggagtagggactctgccaagatggtctttgtagacgtagcc 711
||||| || |||||||||||||| || ||||||||||| ||||||||||| || || |||
Sbjct: 256 ctgtcgaatttgtatccatggagcagtgactctgccaaaatggtctttgtggatgtggcc 197
Query: 712 aggcagccaaccatggcagcacagaaaccgaaaatgttgaagctaagctctgtcaccgaa 771
|||||||| |||||||| || ||||| || || |||||||||| ||||| || ||||||
Sbjct: 196 aggcagcccaccatggcggcgcagaagccaaacgtgttgaagctcagctcagttaccgaa 137
Query: 772 gtcaggagtattccgccaactatagggaccagcgaagcccatatgcgccactcgaa 827
||||| || || || || || ||||||| || |||||||| |||||||| |||||
Sbjct: 136 gtcagaagaatgcctcccacaatagggatcaaagaagcccagatgcgccattcgaa 81
Score = 95.6 bits (48), Expect = 1e-017
Identities = 102/120 (85%)
Strand = Plus / Minus
Query: 393 ccacgacactaacactgccaccgcgactttaaggttgcctgcaacgttgaacgtcactgc 452
||||||||| | ||| ||||| || || || |||||||| || |||||||||||||| ||
Sbjct: 635 ccacgacaccagcaccgccacggccaccttgaggttgccggccacgttgaacgtcacggc 576
Query: 453 tgttgttgaatggatgacgtagaagatggagaagttaaggcagaacgcaagcacccccga 512
|| || || ||||| |||||||||||||||||||| |||||||| || |||||||||||
Sbjct: 575 cgtcgtcgagtggatcacgtagaagatggagaagttgaggcagaaggccagcacccccga 516
Score = 58.0 bits (29), Expect = 2e-006
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 610 atcatggtggcaaagggtgccatgtagtacaccgtgttaatgctg 654
||||| || |||||||| |||||||||||||||||||| ||||||
Sbjct: 418 atcatcgtcgcaaagggagccatgtagtacaccgtgttgatgctg 374
>gb|CW276614.1|CW276614 104_750_11405585_148_35398_073 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11405585, DNA
sequence
Length = 693
Score = 119 bits (60), Expect = 7e-025
Identities = 147/176 (83%)
Strand = Plus / Minus
Query: 652 ctgtcaaacttgtatccatggagtagggactctgccaagatggtctttgtagacgtagcc 711
||||| || |||||||||||||| || ||||||||||| ||||||||||| || || |||
Sbjct: 190 ctgtcgaatttgtatccatggagcagtgactctgccaaaatggtctttgtggatgtggcc 131
Query: 712 aggcagccaaccatggcagcacagaaaccgaaaatgttgaagctaagctctgtcaccgaa 771
|||||||| |||||||| || ||||| || || |||||||||| ||||| || ||||||
Sbjct: 130 aggcagcccaccatggcggcgcagaagccaaacgtgttgaagctcagctcagttaccgaa 71
Query: 772 gtcaggagtattccgccaactatagggaccagcgaagcccatatgcgccactcgaa 827
||||| || || || || || ||||||| || |||||||| |||||||| |||||
Sbjct: 70 gtcagaagaatgcctcccacaatagggatcaaagaagcccagatgcgccattcgaa 15
Score = 117 bits (59), Expect = 3e-024
Identities = 182/223 (81%)
Strand = Plus / Minus
Query: 290 gctgcgagatcagatgcctcacatagccatagaaagtgcaaccaaccagggtgattccac 349
|||||||||| || |||||||| ||||| ||||| ||||| || || || |||| | |
Sbjct: 672 gctgcgagatgaggtgcctcacgtagccgtagaaggtgcagccgacgagcgtgacagcgc 613
Query: 350 acccgattgcattcattgcagagattggattccggaagatcgaccacgacactaacactg 409
| |||| || ||||| || ||||| || |||||||||||| ||||||||| | ||| |
Sbjct: 612 agccgacggcgttcatggccgagatggggttccggaagatcatccacgacaccagcaccg 553
Query: 410 ccaccgcgactttaaggttgcctgcaacgttgaacgtcactgctgttgttgaatggatga 469
|||| || || || |||||||| || |||||||||||||| || || || || ||||| |
Sbjct: 552 ccacggccaccttgaggttgccggccacgttgaacgtcacggccgtcgtcgagtggatca 493
Query: 470 cgtagaagatggagaagttaaggcagaacgcaagcacccccga 512
||||||||||||||||||| |||||||| || |||||||||||
Sbjct: 492 cgtagaagatggagaagttgaggcagaaggccagcacccccga 450
Score = 58.0 bits (29), Expect = 2e-006
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 610 atcatggtggcaaagggtgccatgtagtacaccgtgttaatgctg 654
||||| || |||||||| |||||||||||||||||||| ||||||
Sbjct: 352 atcatcgtcgcaaagggagccatgtagtacaccgtgttgatgctg 308
>gb|CW491852.1|CW491852 fsbb001f281o10f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f281o10, DNA
sequence
Length = 733
Score = 117 bits (59), Expect = 3e-024
Identities = 71/75 (94%)
Strand = Plus / Minus
Query: 1110 ctggaagatccacttgttcatgatgatgacagtgacgttgaagccccaccactggaggat 1169
|||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 279 ctggaagatccacttgttgatgatgatgacggtgacgttgaatccccaccactggaggat 220
Query: 1170 ggcgagcaccgcgcg 1184
||||||||| |||||
Sbjct: 219 ggcgagcacggcgcg 205
>gb|CW203848.1|CW203848 104_631_11186229_148_37093_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11186229, DNA
sequence
Length = 676
Score = 111 bits (56), Expect = 2e-022
Identities = 128/152 (84%)
Strand = Plus / Plus
Query: 361 ttcattgcagagattggattccggaagatcgaccacgacactaacactgccaccgcgact 420
||||| || ||||| || |||||||||||| ||||||||| | ||| ||||| || ||
Sbjct: 423 ttcatggccgagatggggttccggaagatcatccacgacaccagcaccgccacggccacc 482
Query: 421 ttaaggttgcctgcaacgttgaacgtcactgctgttgttgaatggatgacgtagaagatg 480
|| |||||||| || |||||||||||||| || || || || ||||| ||||||||||||
Sbjct: 483 ttgaggttgccggccacgttgaacgtcacggccgtcgtcgagtggatcacgtagaagatg 542
Query: 481 gagaagttaaggcagaacgcaagcacccccga 512
|||||||| |||||||| || |||||||||||
Sbjct: 543 gagaagttgaggcagaaggccagcacccccga 574
>gb|BG158692.1|BG158692 RHIZ2_44_A05.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 478
Score = 97.6 bits (49), Expect = 2e-018
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 254 gcgctgttcctagactccctggggctgcagcctggcgctgcgagatcagatgcctcacat 313
||||||||||| |||||||||||||||||||||| || || ||||||||||||||||| |
Sbjct: 73 gcgctgttcctggactccctggggctgcagcctgccgttgtgagatcagatgcctcacgt 14
Query: 314 agccataga 322
|||||||||
Sbjct: 13 agccataga 5
Score = 63.9 bits (32), Expect = 3e-008
Identities = 55/62 (88%), Gaps = 3/62 (4%)
Strand = Plus / Minus
Query: 189 ttgctaaaccttttcttgcttctcgtccacaacaaggggaagcatctccgtctgattcct 248
||||||||||||||||||||| |||||| |||||||||||||| ||| ||||||| ||
Sbjct: 144 ttgctaaaccttttcttgcttgtcgtcc---acaaggggaagcatttccatctgatttct 88
Query: 249 tg 250
||
Sbjct: 87 tg 86
Score = 61.9 bits (31), Expect = 1e-007
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 139 agtacatatataattctctcttcaacaagtgaaga 173
||||||||||||||||||||||||| |||||||||
Sbjct: 300 agtacatatataattctctcttcaagaagtgaaga 266
Score = 46.1 bits (23), Expect = 0.008
Identities = 60/71 (84%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 45 attctgatgctggcgattagtgtcacaaatggaaggaggaaacgatgcttgtacgaagtt 104
|||||||| |||| || || | ||| |||||||||||||||| ||||| | || ||||||
Sbjct: 400 attctgatactggagactaatatcaaaaatggaaggaggaaaagatgc-tataagaagtt 342
Query: 105 ccagtttacta 115
||| |||||||
Sbjct: 341 ccaatttacta 331
>gb|BG273430.1|BG273430 OV2_25_F02.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 203
Score = 95.6 bits (48), Expect = 1e-017
Identities = 51/52 (98%)
Strand = Plus / Minus
Query: 1179 cgcgcgcagggtgcccaggccggccggcgccttgccgccgtcctccatctct 1230
|||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 203 cgcgcgcagggtgcccaggctggccggcgccttgccgccgtcctccatctct 152
>gb|CW446397.1|CW446397 fsbb001f179a13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f179a13, DNA
sequence
Length = 611
Score = 79.8 bits (40), Expect = 6e-013
Identities = 154/192 (80%)
Strand = Plus / Minus
Query: 290 gctgcgagatcagatgcctcacatagccatagaaagtgcaaccaaccagggtgattccac 349
|||||||||| || |||||||| ||||| ||||| ||||| || || || |||| | |
Sbjct: 192 gctgcgagatgaggtgcctcacgtagccgtagaaggtgcagccgacgagcgtgacagcgc 133
Query: 350 acccgattgcattcattgcagagattggattccggaagatcgaccacgacactaacactg 409
| |||| || ||||| || ||||| || |||||||||||| ||||||||| | ||| |
Sbjct: 132 agccgacggcgttcatggccgagatggggttccggaagatcatccacgacaccagcaccg 73
Query: 410 ccaccgcgactttaaggttgcctgcaacgttgaacgtcactgctgttgttgaatggatga 469
|||| || || || |||||||| || |||||||||||||| || || || || ||||| |
Sbjct: 72 ccacggccaccttgaggttgccggccacgttgaacgtcacggccgtcgtcgagtggatca 13
Query: 470 cgtagaagatgg 481
||||||||||||
Sbjct: 12 cgtagaagatgg 1
>gb|BG273295.1|BG273295 OV2_25_F02.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 381
Score = 75.8 bits (38), Expect = 9e-012
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 367 gcagagattggattccggaagatcgaccacgacactaacactgccaccgc 416
|||||||||||||||||||||||| |||| ||||||||||| ||||||||
Sbjct: 52 gcagagattggattccggaagatcaaccatgacactaacacagccaccgc 3
Score = 69.9 bits (35), Expect = 6e-010
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 131 cacgcacgagtacatatataattctctcttcaacaagtgaaga 173
|||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 282 cacgcatgagtacatatataattctctcttcaagaagtgaaga 240
Score = 56.0 bits (28), Expect = 8e-006
Identities = 54/62 (87%), Gaps = 3/62 (4%)
Strand = Plus / Minus
Query: 189 ttgctaaaccttttcttgcttctcgtccacaacaaggggaagcatctccgtctgattcct 248
||||||||||||||||||||| | |||| |||||||||||||| ||| ||||||| ||
Sbjct: 119 ttgctaaaccttttcttgcttgttgtcc---acaaggggaagcatttccatctgatttct 63
Query: 249 tg 250
||
Sbjct: 62 tg 61
Score = 54.0 bits (27), Expect = 3e-005
Identities = 61/71 (85%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 45 attctgatgctggcgattagtgtcacaaatggaaggaggaaacgatgcttgtacgaagtt 104
|||||||| |||| || || | |||||||||||||||||||| ||||| | || ||||||
Sbjct: 374 attctgatactggagactaatatcacaaatggaaggaggaaaagatgc-tataagaagtt 316
Query: 105 ccagtttacta 115
||| |||||||
Sbjct: 315 ccaatttacta 305
>gb|BG357409.1|BG357409 OV2_29_E09.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 561
Score = 73.8 bits (37), Expect = 4e-011
Identities = 151/189 (79%)
Strand = Plus / Minus
Query: 290 gctgcgagatcagatgcctcacatagccatagaaagtgcaaccaaccagggtgattccac 349
|||||||||| || |||||||| ||||| ||||| ||||| || || || |||| | |
Sbjct: 189 gctgcgagatgaggtgcctcacgtagccgtagaaggtgcagccgacgagcgtgacagcgc 130
Query: 350 acccgattgcattcattgcagagattggattccggaagatcgaccacgacactaacactg 409
| |||| || ||||| || ||||| || |||||||||||| ||||||||| | ||| |
Sbjct: 129 agccgacggcgttcatggccgagatggggttccggaagatcatccacgacaccagcaccg 70
Query: 410 ccaccgcgactttaaggttgcctgcaacgttgaacgtcactgctgttgttgaatggatga 469
|||| || || || |||||||| || |||||||||||||| || || || || ||||| |
Sbjct: 69 ccacggccaccttgaggttgccggccacgttgaacgtcacggccgtcgtcgagtggatca 10
Query: 470 cgtagaaga 478
|||||||||
Sbjct: 9 cgtagaaga 1
>gb|CW270755.1|CW270755 104_742_11402613_148_35334_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11402613, DNA
sequence
Length = 249
Score = 42.1 bits (21), Expect = 0.12
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1084 gtgagagggaacttgaaatccagtttctg 1112
|||||||| ||||||||||||| ||||||
Sbjct: 1 gtgagaggaaacttgaaatccattttctg 29
>gb|CW268040.1|CW268040 104_738_11401067_116_35301_038 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11401067, DNA
sequence
Length = 661
Score = 40.1 bits (20), Expect = 0.49
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 434 caacgttgaacgtcactgct 453
||||||||||||||||||||
Sbjct: 190 caacgttgaacgtcactgct 171
>gb|AW284046.1|AW284046 LG1_267_B04.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 485
Score = 40.1 bits (20), Expect = 0.49
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 434 caacgttgaacgtcactgct 453
||||||||||||||||||||
Sbjct: 422 caacgttgaacgtcactgct 441
>gb|AW286428.1|AW286428 LG1_332_F05.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 503
Score = 40.1 bits (20), Expect = 0.49
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 434 caacgttgaacgtcactgct 453
||||||||||||||||||||
Sbjct: 460 caacgttgaacgtcactgct 479
>gb|AW563298.1|AW563298 LG1_228_E05.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 274
Score = 40.1 bits (20), Expect = 0.49
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 434 caacgttgaacgtcactgct 453
||||||||||||||||||||
Sbjct: 249 caacgttgaacgtcactgct 268
>gb|AW565359.1|AW565359 LG1_343_B11.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 654
Score = 40.1 bits (20), Expect = 0.49
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 434 caacgttgaacgtcactgct 453
||||||||||||||||||||
Sbjct: 611 caacgttgaacgtcactgct 630
>gb|AW565417.1|AW565417 LG1_343_B07.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 596
Score = 40.1 bits (20), Expect = 0.49
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 434 caacgttgaacgtcactgct 453
||||||||||||||||||||
Sbjct: 553 caacgttgaacgtcactgct 572
>gb|AW745289.1|AW745289 LG1_387_G04.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 554
Score = 40.1 bits (20), Expect = 0.49
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 434 caacgttgaacgtcactgct 453
||||||||||||||||||||
Sbjct: 507 caacgttgaacgtcactgct 526
>gb|BE363908.1|BE363908 PI1_10_G02.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 397
Score = 40.1 bits (20), Expect = 0.49
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 434 caacgttgaacgtcactgct 453
||||||||||||||||||||
Sbjct: 346 caacgttgaacgtcactgct 365
>gb|BE365371.1|BE365371 PI1_26_C09.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 563
Score = 40.1 bits (20), Expect = 0.49
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 434 caacgttgaacgtcactgct 453
||||||||||||||||||||
Sbjct: 520 caacgttgaacgtcactgct 539
>gb|BE365921.1|BE365921 PI1_2_A05.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 639
Score = 40.1 bits (20), Expect = 0.49
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 434 caacgttgaacgtcactgct 453
||||||||||||||||||||
Sbjct: 596 caacgttgaacgtcactgct 615
>gb|BE365942.1|BE365942 PI1_2_C12.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 636
Score = 40.1 bits (20), Expect = 0.49
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 434 caacgttgaacgtcactgct 453
||||||||||||||||||||
Sbjct: 593 caacgttgaacgtcactgct 612
>gb|BE366584.1|BE366584 PI1_35_A05.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 593
Score = 40.1 bits (20), Expect = 0.49
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 434 caacgttgaacgtcactgct 453
||||||||||||||||||||
Sbjct: 510 caacgttgaacgtcactgct 529
>gb|BE367385.1|BE367385 PI1_4_G12.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 643
Score = 40.1 bits (20), Expect = 0.49
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 434 caacgttgaacgtcactgct 453
||||||||||||||||||||
Sbjct: 600 caacgttgaacgtcactgct 619
>gb|BE367500.1|BE367500 PI1_8_B07.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 508
Score = 40.1 bits (20), Expect = 0.49
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 434 caacgttgaacgtcactgct 453
||||||||||||||||||||
Sbjct: 461 caacgttgaacgtcactgct 480
>gb|BE596491.1|BE596491 PI1_57_H09.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 654
Score = 40.1 bits (20), Expect = 0.49
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 434 caacgttgaacgtcactgct 453
||||||||||||||||||||
Sbjct: 614 caacgttgaacgtcactgct 633
>gb|BE596604.1|BE596604 PI1_58_C09.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 658
Score = 40.1 bits (20), Expect = 0.49
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 434 caacgttgaacgtcactgct 453
||||||||||||||||||||
Sbjct: 630 caacgttgaacgtcactgct 649
>gb|BE597247.1|BE597247 PI1_69_H10.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 595
Score = 40.1 bits (20), Expect = 0.49
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 434 caacgttgaacgtcactgct 453
||||||||||||||||||||
Sbjct: 553 caacgttgaacgtcactgct 572
>gb|BE598524.1|BE598524 PI1_83_E02.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 702
Score = 40.1 bits (20), Expect = 0.49
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 434 caacgttgaacgtcactgct 453
||||||||||||||||||||
Sbjct: 657 caacgttgaacgtcactgct 676
>gb|BE598595.1|BE598595 PI1_84_F03.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 608
Score = 40.1 bits (20), Expect = 0.49
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 434 caacgttgaacgtcactgct 453
||||||||||||||||||||
Sbjct: 573 caacgttgaacgtcactgct 592
>gb|BE599014.1|BE599014 PI1_86_D02.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 652
Score = 40.1 bits (20), Expect = 0.49
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 434 caacgttgaacgtcactgct 453
||||||||||||||||||||
Sbjct: 614 caacgttgaacgtcactgct 633
>gb|BE600300.1|BE600300 PI1_94_G01.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 650
Score = 40.1 bits (20), Expect = 0.49
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 434 caacgttgaacgtcactgct 453
||||||||||||||||||||
Sbjct: 612 caacgttgaacgtcactgct 631
>gb|BE600359.1|BE600359 PI1_95_D09.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 646
Score = 40.1 bits (20), Expect = 0.49
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 434 caacgttgaacgtcactgct 453
||||||||||||||||||||
Sbjct: 612 caacgttgaacgtcactgct 631
>gb|BE601223.1|BE601223 PI1_90_D11.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 640
Score = 40.1 bits (20), Expect = 0.49
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 434 caacgttgaacgtcactgct 453
||||||||||||||||||||
Sbjct: 606 caacgttgaacgtcactgct 625
>gb|BE601376.1|BE601376 PI1_92_C02.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 621
Score = 40.1 bits (20), Expect = 0.49
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 434 caacgttgaacgtcactgct 453
||||||||||||||||||||
Sbjct: 599 caacgttgaacgtcactgct 618
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 340,157
Number of Sequences: 832831
Number of extensions: 340157
Number of successful extensions: 93523
Number of sequences better than 0.5: 94
Number of HSP's better than 0.5 without gapping: 94
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93381
Number of HSP's gapped (non-prelim): 137
length of query: 1279
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1259
effective length of database: 474,703,049
effective search space: 597651138691
effective search space used: 597651138691
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)