BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2493944.2.1
(2055 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CX611907.1|CX611907 ANR1_27_H10.b1_A002 Anaerobic roots ... 837 0.0
gb|CL159656.1|CL159656 104_349_10804417_116_31382_241 Sorgh... 569 e-160
gb|CW276976.1|CW276976 104_750_11405776_148_35399_050 Sorgh... 569 e-160
gb|CW439175.1|CW439175 fsbb001f157d01k0 Sorghum methylation... 418 e-115
gb|CW033209.1|CW033209 104_262_10501822_115_30362 Sorghum m... 391 e-106
gb|CW457841.1|CW457841 fsbb001f203n07f0 Sorghum methylation... 333 4e-089
gb|CW276975.1|CW276975 104_750_11405776_116_35395_050 Sorgh... 329 6e-088
gb|CW262736.1|CW262736 104_730_11230244_116_35224_072 Sorgh... 325 9e-087
gb|CW262737.1|CW262737 104_730_11230244_148_35220_072 Sorgh... 325 9e-087
gb|CW400388.1|CW400388 fsbb001f090k19f0 Sorghum methylation... 325 9e-087
gb|CW457045.1|CW457045 fsbb001f202l01f0 Sorghum methylation... 321 1e-085
gb|CW449570.1|CW449570 fsbb001f183m13f0 Sorghum methylation... 301 1e-079
gb|CW469126.1|CW469126 fsbb001f221l01f0 Sorghum methylation... 299 5e-079
gb|CW498973.1|CW498973 fsbb001f293i01f0 Sorghum methylation... 274 3e-071
gb|CW050896.1|CW050896 104_291_10514924_114_30192 Sorghum m... 258 2e-066
gb|CL181798.1|CL181798 104_392_10896983_148_31925_359 Sorgh... 256 7e-066
gb|CW306883.1|CW306883 104_792_11467079_148_35713_084 Sorgh... 256 7e-066
gb|CW231621.1|CW231621 104_681_11211220_116_37346_016 Sorgh... 238 2e-060
gb|CW231622.1|CW231622 104_681_11211220_148_37350_016 Sorgh... 238 2e-060
gb|CW457046.1|CW457046 fsbb001f202l01k0 Sorghum methylation... 238 2e-060
gb|CW498974.1|CW498974 fsbb001f293i01k0 Sorghum methylation... 238 2e-060
gb|CW156831.1|CW156831 104_560_11146901_148_36380_031 Sorgh... 230 4e-058
gb|CW449571.1|CW449571 fsbb001f183m13k0 Sorghum methylation... 224 3e-056
gb|CW156830.1|CW156830 104_560_11146901_116_36379_031 Sorgh... 218 2e-054
gb|CW151042.1|CW151042 104_551_11143730_148_36309_003 Sorgh... 216 6e-054
gb|CW400389.1|CW400389 fsbb001f090k19k0 Sorghum methylation... 216 6e-054
gb|CW065110.1|CW065110 104_311_10522954_115_30121 Sorghum m... 210 4e-052
gb|CD227732.1|CD227732 CCC1_53_H10.g1_A007 Callus culture/c... 206 6e-051
gb|CD228117.1|CD228117 CCC1_5_A09.g1_A007 Callus culture/ce... 202 9e-050
gb|CW022071.1|CW022071 104_161_10431625_1_30006 Sorghum met... 198 1e-048
gb|CD222254.1|CD222254 CCC1_2_E04.g1_A007 Callus culture/ce... 198 1e-048
gb|CD227907.1|CD227907 CCC1_56_C12.g1_A007 Callus culture/c... 198 1e-048
gb|CF074446.1|CF074446 FE1_24_E03.g1_A002 Iron-deficient se... 198 1e-048
gb|CN127871.1|CN127871 RHOH1_25_C09.g1_A002 Acid- and alkal... 198 1e-048
gb|CW022072.1|CW022072 104_161_10431625_5_30007 Sorghum met... 190 4e-046
gb|CF071286.1|CF071286 FE1_16_A06.g1_A002 Iron-deficient se... 190 4e-046
gb|BG560224.1|BG560224 RHIZ2_71_F04.b1_A003 Rhizome2 (RHIZ2... 188 1e-045
gb|CD204377.1|CD204377 HS1_7_F03.g1_A012 Heat-shocked seedl... 188 1e-045
gb|CD222241.1|CD222241 CCC1_2_D02.g1_A007 Callus culture/ce... 188 1e-045
gb|CW073779.1|CW073779 104_339_10781480_114_31371_344 Sorgh... 184 2e-044
gb|CX618822.1|CX618822 GABR1_41_H05.g1_A002 GA- or brassino... 178 1e-042
gb|CW023223.1|CW023223 104_163_10432326_1_30001 Sorghum met... 165 2e-038
gb|CL181797.1|CL181797 104_392_10896983_116_31926_359 Sorgh... 161 3e-037
gb|CW042642.1|CW042642 104_276_10507205_114_30482 Sorghum m... 161 3e-037
gb|CW050897.1|CW050897 104_291_10514924_115_30196 Sorghum m... 161 3e-037
gb|CW065109.1|CW065109 104_311_10522954_114_30122 Sorghum m... 161 3e-037
gb|CW385193.1|CW385193 fsbb001f068j07f0 Sorghum methylation... 161 3e-037
gb|CW385194.1|CW385194 fsbb001f068j07k0 Sorghum methylation... 161 3e-037
gb|CW427480.1|CW427480 fsbb001f139i05k0 Sorghum methylation... 161 3e-037
gb|BE595814.1|BE595814 PI1_54_D08.b1_A002 Pathogen induced ... 155 2e-035
gb|CN135740.1|CN135740 OX1_38_E07.g1_A002 Oxidatively-stres... 155 2e-035
gb|CW265997.1|CW265997 104_735_11232189_116_35271_087 Sorgh... 147 5e-033
gb|CF484409.1|CF484409 POL1_25_D08.b1_A002 Pollen Sorghum b... 147 5e-033
gb|CF480551.1|CF480551 POL1_66_A09.g1_A002 Pollen Sorghum b... 143 7e-032
gb|CF480720.1|CF480720 POL1_67_B04.g1_A002 Pollen Sorghum b... 143 7e-032
gb|CF480721.1|CF480721 POL1_67_B05.g1_A002 Pollen Sorghum b... 143 7e-032
gb|CF481221.1|CF481221 POL1_70_E03.g1_A002 Pollen Sorghum b... 143 7e-032
gb|CF481558.1|CF481558 POL1_72_E04.g1_A002 Pollen Sorghum b... 143 7e-032
gb|CF482541.1|CF482541 POL1_7_C12.g1_A002 Pollen Sorghum bi... 143 7e-032
gb|CF483034.1|CF483034 POL1_10_G04.g1_A002 Pollen Sorghum b... 143 7e-032
gb|CF483368.1|CF483368 POL1_21_F08.g1_A002 Pollen Sorghum b... 143 7e-032
gb|CF483384.1|CF483384 POL1_21_H05.g1_A002 Pollen Sorghum b... 143 7e-032
gb|CF483505.1|CF483505 POL1_22_E10.g1_A002 Pollen Sorghum b... 143 7e-032
gb|CF484492.1|CF484492 POL1_25_D08.g1_A002 Pollen Sorghum b... 143 7e-032
gb|CF485659.1|CF485659 POL1_32_G08.g1_A002 Pollen Sorghum b... 143 7e-032
gb|CF486075.1|CF486075 POL1_35_C03.g1_A002 Pollen Sorghum b... 143 7e-032
gb|CF486748.1|CF486748 POL1_39_B11.g1_A002 Pollen Sorghum b... 143 7e-032
gb|CF486935.1|CF486935 POL1_40_F03.g1_A002 Pollen Sorghum b... 143 7e-032
gb|CF487273.1|CF487273 POL1_42_F11.g1_A002 Pollen Sorghum b... 143 7e-032
gb|CF488213.1|CF488213 POL1_48_A10.g1_A002 Pollen Sorghum b... 143 7e-032
gb|CW162564.1|CW162564 104_569_11151007_148_36439_018 Sorgh... 135 2e-029
gb|CW194596.1|CW194596 104_617_11180180_148_36790_066 Sorgh... 135 2e-029
gb|CW199055.1|CW199055 104_624_11183306_148_36855_015 Sorgh... 135 2e-029
gb|CF480611.1|CF480611 POL1_66_G02.g1_A002 Pollen Sorghum b... 135 2e-029
gb|CD204267.1|CD204267 HS1_4_A06.g1_A012 Heat-shocked seedl... 125 2e-026
gb|CW298321.1|CW298321 104_780_11462518_116_35647_081 Sorgh... 119 1e-024
gb|CW394782.1|CW394782 fsbb001f082i17f0 Sorghum methylation... 119 1e-024
gb|CF483263.1|CF483263 POL1_21_B02.b1_A002 Pollen Sorghum b... 115 2e-023
gb|CC059780.1|CC059780 ii28f12.b1 WGS-SbicolorF (DH5a methy... 113 7e-023
gb|CW164970.1|CW164970 104_573_11152260_148_36476_046 Sorgh... 113 7e-023
gb|CW265998.1|CW265998 104_735_11232189_148_35267_087 Sorgh... 113 7e-023
gb|CF483326.1|CF483326 POL1_21_B02.g1_A002 Pollen Sorghum b... 113 7e-023
gb|CF485817.1|CF485817 POL1_33_G12.g1_A002 Pollen Sorghum b... 109 1e-021
gb|CF485961.1|CF485961 POL1_34_G06.g1_A002 Pollen Sorghum b... 107 4e-021
gb|CW100262.1|CW100262 104_467_11004005_116_34388_021 Sorgh... 105 2e-020
gb|CL154537.1|CL154537 104_339_10781480_116_31372_344 Sorgh... 92 2e-016
gb|CW199054.1|CW199054 104_624_11183306_116_36856_015 Sorgh... 92 2e-016
gb|CW025295.1|CW025295 104_226_10488107_114_30497 Sorghum m... 86 2e-014
gb|CW130478.1|CW130478 104_513_11115136_116_34781_064 Sorgh... 86 2e-014
gb|CW498599.1|CW498599 fsbb001f291o14f0 Sorghum methylation... 86 2e-014
gb|CN127791.1|CN127791 RHOH1_25_C09.b1_A002 Acid- and alkal... 86 2e-014
gb|CW107380.1|CW107380 104_477_11096552_116_34475_022 Sorgh... 84 6e-014
gb|CW225943.1|CW225943 104_663_11204625_148_37212_035 Sorgh... 84 6e-014
gb|CW269967.1|CW269967 104_741_11402135_148_35326_090 Sorgh... 84 6e-014
gb|CW283796.1|CW283796 104_760_11409436_116_35484_010 Sorgh... 84 6e-014
gb|CW283797.1|CW283797 104_760_11409436_148_35488_010 Sorgh... 84 6e-014
gb|CW415441.1|CW415441 fsbb001f115i18f0 Sorghum methylation... 84 6e-014
gb|CW097767.1|CW097767 104_464_11002644_116_34363_048 Sorgh... 82 2e-013
gb|CW198338.1|CW198338 104_623_11182923_116_36845_016 Sorgh... 82 2e-013
gb|CW200271.1|CW200271 104_625_11183974_116_36860_083 Sorgh... 82 2e-013
gb|CW244061.1|CW244061 104_704_11220385_116_37577_001 Sorgh... 82 2e-013
gb|CW311778.1|CW311778 104_801_11470408_116_36284_058 Sorgh... 82 2e-013
gb|CW500596.1|CW500596 fsbb001f295p19f0 Sorghum methylation... 82 2e-013
gb|CW500597.1|CW500597 fsbb001f295p19k0 Sorghum methylation... 82 2e-013
gb|CW070613.1|CW070613 104_321_10526871_1_30090 Sorghum met... 80 9e-013
gb|CX607759.1|CX607759 ANR1_30_C08.g1_A002 Anaerobic roots ... 80 9e-013
gb|CD204160.1|CD204160 HS1_4_A06.b1_A012 Heat-shocked seedl... 78 4e-012
gb|CD204280.1|CD204280 HS1_7_F03.b1_A012 Heat-shocked seedl... 78 4e-012
gb|CD222171.1|CD222171 CCC1_2_E04.b1_A007 Callus culture/ce... 78 4e-012
gb|CF770834.1|CF770834 DSBF1_10_C07.g1_A010 Drought-stresse... 78 4e-012
gb|CX607675.1|CX607675 ANR1_30_C08.b1_A002 Anaerobic roots ... 78 4e-012
gb|CX618736.1|CX618736 GABR1_41_H05.b1_A002 GA- or brassino... 78 4e-012
gb|BH245821.1|BH245821 pSB1394.2 S. bicolor BTx623 PstI-dig... 76 1e-011
gb|CL159655.1|CL159655 104_349_10804417_114_31381_241 Sorgh... 76 1e-011
gb|CW070614.1|CW070614 104_321_10526871_5_30098 Sorghum met... 76 1e-011
gb|CW130479.1|CW130479 104_513_11115136_148_34777_064 Sorgh... 76 1e-011
gb|CW370574.1|CW370574 fsbb001f045j06f0 Sorghum methylation... 76 1e-011
gb|CW498600.1|CW498600 fsbb001f291o14k0 Sorghum methylation... 76 1e-011
gb|CF489464.1|CF489464 POL1_57_F01.g1_A002 Pollen Sorghum b... 76 1e-011
gb|CL172973.1|CL172973 104_376_10890553_116_31795_073 Sorgh... 72 2e-010
gb|CL172974.1|CL172974 104_376_10890553_148_31794_073 Sorgh... 72 2e-010
gb|CL176293.1|CL176293 104_382_10893039_116_31763_255 Sorgh... 72 2e-010
gb|CL176294.1|CL176294 104_382_10893039_148_31762_255 Sorgh... 72 2e-010
gb|CW163223.1|CW163223 104_570_11151351_116_36449_052 Sorgh... 72 2e-010
gb|CW174586.1|CW174586 104_586_11157486_116_36565_019 Sorgh... 72 2e-010
gb|CW198339.1|CW198339 104_623_11182923_148_37057_016 Sorgh... 72 2e-010
gb|CW305209.1|CW305209 104_790_11466195_116_35700_008 Sorgh... 72 2e-010
gb|CF483429.1|CF483429 POL1_22_E10.b1_A002 Pollen Sorghum b... 72 2e-010
gb|CW107381.1|CW107381 104_477_11096552_148_34471_022 Sorgh... 70 9e-010
gb|CW269966.1|CW269966 104_741_11402135_116_35322_090 Sorgh... 70 9e-010
gb|CW300032.1|CW300032 104_783_11463432_148_36247_092 Sorgh... 70 9e-010
gb|BE595751.1|BE595751 PI1_54_D08.g1_A002 Pathogen induced ... 70 9e-010
gb|BG465260.1|BG465260 EM1_74_A05.g1_A002 Embryo 1 (EM1) So... 70 9e-010
gb|CD222173.1|CD222173 CCC1_2_D02.b1_A007 Callus culture/ce... 70 9e-010
gb|CD227690.1|CD227690 CCC1_53_F01.b1_A007 Callus culture/c... 70 9e-010
gb|CD227870.1|CD227870 CCC1_56_A03.b1_A007 Callus culture/c... 70 9e-010
gb|CD228008.1|CD228008 CCC1_5_A09.b1_A007 Callus culture/ce... 70 9e-010
gb|CF071235.1|CF071235 FE1_16_A06.b1_A002 Iron-deficient se... 70 9e-010
gb|CN135656.1|CN135656 OX1_38_E07.b1_A002 Oxidatively-stres... 70 9e-010
gb|BZ781398.1|BZ781398 ii28f12.g1 WGS-SbicolorF (DH5a methy... 68 4e-009
gb|CW084528.1|CW084528 104_427_10945847_116_32509_090 Sorgh... 68 4e-009
gb|CW051351.1|CW051351 104_291_10515200_115_30196 Sorghum m... 66 1e-008
gb|CD425117.1|CD425117 SA1_10_D06.g1_A002 Salicylic acid-tr... 66 1e-008
gb|CN132843.1|CN132843 OX1_8_C05.g1_A002 Oxidatively-stress... 66 1e-008
gb|CW200491.1|CW200491 104_626_11184087_116_36869_064 Sorgh... 64 6e-008
gb|CW257600.1|CW257600 104_723_11227424_148_35157_030 Sorgh... 64 6e-008
gb|CW394783.1|CW394783 fsbb001f082i17k0 Sorghum methylation... 64 6e-008
gb|CL196964.1|CL196964 104_423_10943421_114_32327_087 Sorgh... 60 9e-007
gb|CW024038.1|CW024038 104_164_10434722_1_30002 Sorghum met... 60 9e-007
gb|CW157593.1|CW157593 104_561_11147606_116_36394_063 Sorgh... 60 9e-007
gb|CW342649.1|CW342649 104_844_11486992_116_36176_054 Sorgh... 60 9e-007
gb|CW342650.1|CW342650 104_844_11486992_148_36175_054 Sorgh... 60 9e-007
gb|CW384314.1|CW384314 fsbb001f067e16k0 Sorghum methylation... 60 9e-007
gb|CW423655.1|CW423655 fsbb001f133j04f0 Sorghum methylation... 60 9e-007
gb|CW451016.1|CW451016 fsbb001f189o15f0 Sorghum methylation... 60 9e-007
gb|CW172359.1|CW172359 104_583_11156250_116_36540_071 Sorgh... 58 3e-006
gb|CW176524.1|CW176524 104_589_11158533_148_36583_087 Sorgh... 58 3e-006
gb|CW221655.1|CW221655 104_656_11198025_148_37167_033 Sorgh... 58 3e-006
gb|CB925835.1|CB925835 ABA1_23_E07.g1_A012 Abscisic acid-tr... 58 3e-006
gb|CD226421.1|CD226421 CCC1_45_B12.g1_A007 Callus culture/c... 58 3e-006
gb|CF073131.1|CF073131 FE1_28_G09.b1_A002 Iron-deficient se... 58 3e-006
gb|CX615540.1|CX615540 GABR1_20_F03.g1_A002 GA- or brassino... 58 3e-006
gb|CX616053.1|CX616053 GABR1_25_C07.g1_A002 GA- or brassino... 58 3e-006
gb|CW298322.1|CW298322 104_780_11462518_148_35651_081 Sorgh... 56 1e-005
gb|CW352129.1|CW352129 fsbb001f014e01f0 Sorghum methylation... 56 1e-005
gb|CW479546.1|CW479546 fsbb001f238c01k0 Sorghum methylation... 56 1e-005
gb|CD220374.1|CD220374 CCC1_66_C08.g1_A007 Callus culture/c... 56 1e-005
gb|CW492384.1|CW492384 fsbb001f282k08f0 Sorghum methylation... 54 5e-005
gb|BE361549.1|BE361549 DG1_81_H04.b1_A002 Dark Grown 1 (DG1... 54 5e-005
gb|BG559635.1|BG559635 RHIZ2_71_F04.g1_A003 Rhizome2 (RHIZ2... 54 5e-005
gb|CW046110.1|CW046110 104_283_10509970_114_30137 Sorghum m... 52 2e-004
gb|CW200492.1|CW200492 104_626_11184087_148_36870_064 Sorgh... 52 2e-004
gb|CW025299.1|CW025299 104_226_10488109_116_30526 Sorghum m... 48 0.003
gb|AI724130.1|AI724130 RHIZ1_7_B04.y2_A001 Rhizome1 (RHIZ1)... 48 0.003
gb|CF480707.1|CF480707 POL1_67_A02.g1_A002 Pollen Sorghum b... 48 0.003
gb|CW108548.1|CW108548 104_480_11097587_116_34495_044 Sorgh... 46 0.013
gb|CW108549.1|CW108549 104_480_11097587_148_34499_044 Sorgh... 46 0.013
gb|CW117841.1|CW117841 104_494_11107877_116_34682_029 Sorgh... 46 0.013
gb|CW162181.1|CW162181 104_569_11150809_116_36440_009 Sorgh... 46 0.013
gb|CW162182.1|CW162182 104_569_11150809_148_36439_009 Sorgh... 46 0.013
gb|CW162685.1|CW162685 104_570_11151068_116_36452_080 Sorgh... 46 0.013
gb|CW169907.1|CW169907 104_580_11154918_148_36511_029 Sorgh... 46 0.013
gb|CW257599.1|CW257599 104_723_11227424_116_35161_030 Sorgh... 46 0.013
gb|CW273339.1|CW273339 104_745_11403844_148_35359_002 Sorgh... 46 0.013
gb|CW273340.1|CW273340 104_745_11403844_148_35717_002 Sorgh... 46 0.013
gb|CW274995.1|CW274995 104_748_11404723_148_35382_078 Sorgh... 46 0.013
gb|CW311562.1|CW311562 104_801_11470297_116_36281_013 Sorgh... 46 0.013
gb|CW407993.1|CW407993 fsbb001f101l05f0 Sorghum methylation... 46 0.013
gb|CW453451.1|CW453451 fsbb001f197h09f0 Sorghum methylation... 46 0.013
gb|CW476975.1|CW476975 fsbb001f234b10f0 Sorghum methylation... 46 0.013
gb|CW494425.1|CW494425 fsbb001f285l05k0 Sorghum methylation... 46 0.013
gb|AW286079.2|AW286079 LG1_261_B06.b1_A002 Light Grown 1 (L... 46 0.013
gb|CW068267.1|CW068267 104_317_10525032_115_30116 Sorghum m... 44 0.051
gb|CW221654.1|CW221654 104_656_11198025_116_37168_033 Sorgh... 44 0.051
gb|CW367113.1|CW367113 fsbb001f040g23f0 Sorghum methylation... 44 0.051
gb|CW449283.1|CW449283 fsbb001f183f13k0 Sorghum methylation... 44 0.051
gb|CL151747.1|CL151747 104_334_10779469_116_31362_253 Sorgh... 42 0.20
gb|CL181180.1|CL181180 104_391_10896560_148_31927_320 Sorgh... 42 0.20
gb|CW042089.1|CW042089 104_275_10506931_115_30285 Sorghum m... 42 0.20
gb|CW056289.1|CW056289 104_298_10517604_114_30156 Sorghum m... 42 0.20
gb|CW262446.1|CW262446 104_730_11230070_116_35227_063 Sorgh... 42 0.20
gb|CW311563.1|CW311563 104_801_11470297_148_36282_013 Sorgh... 42 0.20
gb|CW473333.1|CW473333 fsbb001f228k15k0 Sorghum methylation... 42 0.20
>gb|CX611907.1|CX611907 ANR1_27_H10.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_27_H10_A002 3', mRNA sequence
Length = 834
Score = 837 bits (422), Expect = 0.0
Identities = 637/710 (89%), Gaps = 9/710 (1%)
Strand = Plus / Minus
Query: 236 ttcatgaccggcttcttcatctcccacgcggtgagacgggacaccttgacgtgcgccctc 295
||||||| ||||||||||||||||| || ||||||||||||||| |||||| |||| ||
Sbjct: 714 ttcatgagtggcttcttcatctcccatgcagtgagacgggacaccctgacgtccgccttc 655
Query: 296 ccgttgttgaacacgtagaggcgagcgtccttgccgatggccagcgacgggtagaccctg 355
||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 654 ccgttgttgaacacgtagaggcgcgcgttgttgccgatggcgagcgacgggtagaccctg 595
Query: 356 gagaggatgcaggtcttgcccccggctccgaagctctcaacgaccgaccggtcgatcagg 415
|| |||||||| ||||||||||||||||| |||||||| || ||||| |||||||||| |
Sbjct: 594 gacaggatgcacgtcttgcccccggctccaaagctctccaccaccgagcggtcgatcaag 535
Query: 416 cttctcagggatatcttgccgttcgagatgtccgtgtcgacaaatcctgcaaatgtcggg 475
|||||||| |||||||| || || || ||||||||||| ||||| || ||||||||||||
Sbjct: 534 cttctcagcgatatcttcccatttgaaatgtccgtgtcaacaaaaccggcaaatgtcggg 475
Query: 476 cggtacaggttcgggttcagggacgacttggtagggtcggtgcacatgagcaccacgggc 535
||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 474 cggtacaggtttgggttcagagacgacttggtagggtcggtgcacatgagcacgacgggc 415
Query: 536 ttgtcg---------ccggcggcgggcttgaacaccctgaagaacaccgcggttctctcc 586
|||| | |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 414 ttgttgttgctgctgccggcggcggccttgaacaccctgaagaacaccgcggttctctcc 355
Query: 587 ttgcggttggcggaggccagcacccacagcccgaacggccccacgccgcccctcacgtcc 646
||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 354 ttgaggttggcggaggccagcacccacagcccgaacggacccacgccgcccttcacgtcg 295
Query: 647 gcgcgcttcacgccgcacagcctctccgcgtcgtaggccagcgccgggtccagcgtctcg 706
|||||||| ||||||||||||||||| ||||||| ||| ||||||||||||||| |||
Sbjct: 294 gcgcgcttgacgccgcacagcctctcggcgtcgtcggcgagcgccgggtccagccgctcc 235
Query: 707 gcaccggccagggccgccggcgacacttcgaagctcacctccacgtcagcctgtgccgtt 766
|| || |||||||||| ||||||| | ||||||||||||||||||||||||||||| |||
Sbjct: 234 gctcccgccagggccgacggcgacgcctcgaagctcacctccacgtcagcctgtgctgtt 175
Query: 767 tgtatcccggtcacctcgacgtgatgtcctgccttgattaccctgttcctgagagtgacc 826
||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||
Sbjct: 174 tgtatcccggtcacctcgacgtgctgtcctggcttgattaccctgttcttgagagtgacc 115
Query: 827 gactttgctctcagcgcctccacctcctcgataggccactgcagcagctgcttcccactg 886
| ||| |||| |||||||| |||||||||| ||||||||||||||||||||||| |||
Sbjct: 114 gccttgcctctgagcgcctctacctcctcgacgggccactgcagcagctgcttcccgctg 55
Query: 887 gggtccagccacaccgtccttggaatcgcctggattccagcccagccttt 936
|||||||||||||||||||| ||||||||||| || || ||||| |||||
Sbjct: 54 gggtccagccacaccgtcctcggaatcgcctgaatcccggcccacccttt 5
>gb|CL159656.1|CL159656 104_349_10804417_116_31382_241 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10804417, DNA
sequence
Length = 659
Score = 569 bits (287), Expect = e-160
Identities = 421/467 (90%), Gaps = 9/467 (1%)
Strand = Plus / Plus
Query: 756 cctgtgccgtttgtatcccggtcacctcgacgtgatgtcctgccttgattaccctgttcc 815
||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 78 cctgtgctgtttgtatcccggtcacctcgacgtgctgtcctggcttgattaccctgttct 137
Query: 816 tgagagtgaccgactttgctctcagcgcctccacctcctcgataggccactgcagcagct 875
|||||||||||| ||| |||| |||||||| |||||||||| ||||||||||||||||
Sbjct: 138 tgagagtgaccgccttgcctctgagcgcctctacctcctcgacgggccactgcagcagct 197
Query: 876 gcttcccactggggtccagccacaccgtccttggaatcgcctggattccagcccagcctt 935
||||||| ||||||||||||||||||||||| ||||||||||| || || ||||| ||||
Sbjct: 198 gcttcccgctggggtccagccacaccgtcctcggaatcgcctgaatcccggcccaccctt 257
Query: 936 tagccacatcgtcggcggcggtgtcggactcgttagcccagccccacaggatgcggcgcc 995
| || ||||||||||||||||||||||||||||| ||||||||||||||||| || ||||
Sbjct: 258 tggcgacatcgtcggcggcggtgtcggactcgttggcccagccccacaggatccgccgcc 317
Query: 996 gcttggccgggtcgtagaacgtcttggacgcgtagaagttgccgtagtcgtagcgcaggc 1055
|||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 318 gcttcgccgggtcgtagaacgtcttggacgcgtagaagttgccgtagtcgtaccgcaggc 377
Query: 1056 ggtgc---------tcgtcgccggcggggtcgtccggcacgtaccgctcggccctcgggt 1106
|| || |||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 378 ggcgctcgccgtcgtcgtcgccggcggggtcgtccggcacgtaccgctcggcgtcccggt 437
Query: 1107 ggtacgtgcccacggtgtagtagtcgtaccgccggaggtcgaggctgttcttgagcacgt 1166
||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 438 cgtacgtgccgacggtgtagtagtcgtaccgccgcaggtcgaggctgttcttgagcacgt 497
Query: 1167 gcttgacccttgggccgggcggcacggacgtctcgagccccgcgcgc 1213
|||| ||||||| ||| | |||||||||||||||||||||| |||||
Sbjct: 498 gcttcacccttgcgcccgacggcacggacgtctcgagccccacgcgc 544
Score = 137 bits (69), Expect = 5e-030
Identities = 87/93 (93%)
Strand = Plus / Plus
Query: 1227 tgctcaccgggtagaagtcagggcactcccacatccccgtgggcgccgagtgcagcggcc 1286
||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||
Sbjct: 567 tgctcaccgggtagaagtccgggcactcccacatccccgtcgccgccgagtgcagcggcc 626
Query: 1287 gccgcacccgcctccaccgccggaagtcgcggc 1319
|||| |||||| ||||||||| |||||||||||
Sbjct: 627 gccggacccgcgtccaccgcctgaagtcgcggc 659
>gb|CW276976.1|CW276976 104_750_11405776_148_35399_050 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11405776, DNA
sequence
Length = 530
Score = 569 bits (287), Expect = e-160
Identities = 421/467 (90%), Gaps = 9/467 (1%)
Strand = Plus / Plus
Query: 756 cctgtgccgtttgtatcccggtcacctcgacgtgatgtcctgccttgattaccctgttcc 815
||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 14 cctgtgctgtttgtatcccggtcacctcgacgtgctgtcctggcttgattaccctgttct 73
Query: 816 tgagagtgaccgactttgctctcagcgcctccacctcctcgataggccactgcagcagct 875
|||||||||||| ||| |||| |||||||| |||||||||| ||||||||||||||||
Sbjct: 74 tgagagtgaccgccttgcctctgagcgcctctacctcctcgacgggccactgcagcagct 133
Query: 876 gcttcccactggggtccagccacaccgtccttggaatcgcctggattccagcccagcctt 935
||||||| ||||||||||||||||||||||| ||||||||||| || || ||||| ||||
Sbjct: 134 gcttcccgctggggtccagccacaccgtcctcggaatcgcctgaatcccggcccaccctt 193
Query: 936 tagccacatcgtcggcggcggtgtcggactcgttagcccagccccacaggatgcggcgcc 995
| || ||||||||||||||||||||||||||||| ||||||||||||||||| || ||||
Sbjct: 194 tggcgacatcgtcggcggcggtgtcggactcgttggcccagccccacaggatccgccgcc 253
Query: 996 gcttggccgggtcgtagaacgtcttggacgcgtagaagttgccgtagtcgtagcgcaggc 1055
|||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 254 gcttcgccgggtcgtagaacgtcttggacgcgtagaagttgccgtagtcgtaccgcaggc 313
Query: 1056 ggtgc---------tcgtcgccggcggggtcgtccggcacgtaccgctcggccctcgggt 1106
|| || |||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 314 ggcgctcgccgtcgtcgtcgccggcggggtcgtccggcacgtaccgctcggcgtcccggt 373
Query: 1107 ggtacgtgcccacggtgtagtagtcgtaccgccggaggtcgaggctgttcttgagcacgt 1166
||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 374 cgtacgtgccgacggtgtagtagtcgtaccgccgcaggtcgaggctgttcttgagcacgt 433
Query: 1167 gcttgacccttgggccgggcggcacggacgtctcgagccccgcgcgc 1213
|||| ||||||| ||| | |||||||||||||||||||||| |||||
Sbjct: 434 gcttcacccttgcgcccgacggcacggacgtctcgagccccacgcgc 480
Score = 48.1 bits (24), Expect = 0.003
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1227 tgctcaccgggtagaagtcagggcactc 1254
||||||||||||||||||| ||||||||
Sbjct: 503 tgctcaccgggtagaagtccgggcactc 530
>gb|CW439175.1|CW439175 fsbb001f157d01k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f157d01, DNA
sequence
Length = 456
Score = 418 bits (211), Expect = e-115
Identities = 336/379 (88%), Gaps = 9/379 (2%)
Strand = Plus / Plus
Query: 756 cctgtgccgtttgtatcccggtcacctcgacgtgatgtcctgccttgattaccctgttcc 815
||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 78 cctgtgctgtttgtatcccggtcacctcgacgtgctgtcctggcttgattaccctgttct 137
Query: 816 tgagagtgaccgactttgctctcagcgcctccacctcctcgataggccactgcagcagct 875
|||||||||||| ||| |||| |||||||| |||||||||| ||||||||||||||||
Sbjct: 138 tgagagtgaccgccttgcctctgagcgcctctacctcctcgacgggccactgcagcagct 197
Query: 876 gcttcccactggggtccagccacaccgtccttggaatcgcctggattccagcccagcctt 935
||||||| ||||||||||||||||||||||| | | || |||| || || ||||| ||||
Sbjct: 198 gcttcccgctggggtccagccacaccgtcctcgtattctcctgaatcccggcccaccctt 257
Query: 936 tagccacatcgtcggcggcggtgtcggactcgttagcccagccccacaggatgcggcgcc 995
| || ||||||||||||||||||||||||||||| ||||||||||||||||| || ||||
Sbjct: 258 tggcgacatcgtcggcggcggtgtcggactcgttggcccagccccacaggatccgccgcc 317
Query: 996 gcttggccgggtcgtagaacgtcttggacgcgtagaagttgccgtagtcgtagcgcaggc 1055
|||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 318 gcttcgccgggtcgtagaacgtcttggacgcgtagaagttgccgtagtcgtaccgcaggc 377
Query: 1056 ggtgc---------tcgtcgccggcggggtcgtccggcacgtaccgctcggccctcgggt 1106
|| || |||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 378 ggcgctcgccgtcgtcgtcgccggcggggtcgtccggcacgtaccgctcggcgtcccggt 437
Query: 1107 ggtacgtgcccacggtgta 1125
||||||||| ||||||||
Sbjct: 438 cgtacgtgccgacggtgta 456
>gb|CW033209.1|CW033209 104_262_10501822_115_30362 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10501822, DNA
sequence
Length = 424
Score = 391 bits (197), Expect = e-106
Identities = 298/333 (89%), Gaps = 9/333 (2%)
Strand = Plus / Minus
Query: 890 tccagccacaccgtccttggaatcgcctggattccagcccagcctttagccacatcgtcg 949
||||||||||||||||| ||||||||||| || | ||||| ||||| || |||||||||
Sbjct: 424 tccagccacaccgtcctcggaatcgcctgaatcacggcccaccctttggcgacatcgtcg 365
Query: 950 gcggcggtgtcggactcgttagcccagccccacaggatgcggcgccgcttggccgggtcg 1009
|||||||||||||||||||| ||||||||||||||||| || |||||||| |||||||||
Sbjct: 364 gcggcggtgtcggactcgttggcccagccccacaggatccgccgccgcttcgccgggtcg 305
Query: 1010 tagaacgtcttggacgcgtagaagttgccgtagtcgtagcgcaggcggtgc--------- 1060
|||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 304 tagaacgtcttggacgcgtagaagttgccgtagtcgtaccgcaggcggcgctcgccgtcg 245
Query: 1061 tcgtcgccggcggggtcgtccggcacgtaccgctcggccctcgggtggtacgtgcccacg 1120
|||||||||||||||||||||||||||||||||||||| | ||| ||||||||| |||
Sbjct: 244 tcgtcgccggcggggtcgtccggcacgtaccgctcggcgtcccggtcgtacgtgccgacg 185
Query: 1121 gtgtagtagtcgtaccgccggaggtcgaggctgttcttgagcacgtgcttgacccttggg 1180
|||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |
Sbjct: 184 gtgtagtagtcgtaccgccgcaggtcgaggctgttcttgagcacgtgcttcacccttgcg 125
Query: 1181 ccgggcggcacggacgtctcgagccccgcgcgc 1213
|| | |||||||||||||||||||||| |||||
Sbjct: 124 cccgacggcacggacgtctcgagccccacgcgc 92
Score = 91.7 bits (46), Expect = 2e-016
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 1227 tgctcaccgggtagaagtcagggcactcccacatccccgtgggcgccgagtgcagcgg 1284
||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||
Sbjct: 69 tgctcaccgggtagaagtccgggcactcccacatccccgtcgccgccgagtgcagcgg 12
>gb|CW457841.1|CW457841 fsbb001f203n07f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f203n07, DNA
sequence
Length = 700
Score = 333 bits (168), Expect = 4e-089
Identities = 328/379 (86%), Gaps = 3/379 (0%)
Strand = Plus / Plus
Query: 1412 gccgtggtcgggtcgcggaactgcgtcacgttgatgccgccctcggggacgatgacgggg 1471
|||||||| ||||| |||||||||||| |||||| |||| ||| ||||||||||| |||
Sbjct: 4 gccgtggtggggtcccggaactgcgtcgcgttgacgccggccttggggacgatgatcggg 63
Query: 1472 ttgtgcgagggcttcacccactcccggagcagcgggtccgacacgttcttcgggtacgcc 1531
|||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 64 ttgtgcgagggcttcacccactcccggagcagcgggtccgacttgttccgagggtacgcg 123
Query: 1532 acgttccggacctggtagttgatgtccgggtggtccacgcccgtgtacatgatcaccggg 1591
| |||| | ||||||||||| | ||| || ||| ||||||||||||||||||| ||||
Sbjct: 124 atgttctgcacctggtagttcacgtcgggacggttcacgcccgtgtacatgatcgccgg- 182
Query: 1592 ccgccgccgtcgggcagcaccgtcgccgacccggaccagcagccgtacctgtcgcccggg 1651
|| ||||||||| ||| ||||||||||| ||||||||||||||| ||||| ||||
Sbjct: 183 -cgt-gccgtcggggagcgtggtcgccgaccctgaccagcagccgtacttgtcggacggg 240
Query: 1652 atgcttggtctgagcgccggctctagcgccacccagttgatgaggtctcgcgacaccgag 1711
||||| || || |||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 241 atgctgggctcgatcgccggcttcagggccacccagttgatgaggtctcgcgacaccgag 300
Query: 1712 tgcgcccacacgatgttgccccatacggcgcccttgggattgtattggtagaagaaatgg 1771
|| ||||||||||||||||||| |||||||| ||||| |||||||||||||||| |||
Sbjct: 301 tggccccacacgatgttgccccacacggcgcctttggggttgtattggtagaagatgtgg 360
Query: 1772 taccaccccttgtagtaca 1790
|||||||||||||||||||
Sbjct: 361 taccaccccttgtagtaca 379
>gb|CW276975.1|CW276975 104_750_11405776_116_35395_050 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11405776, DNA
sequence
Length = 599
Score = 329 bits (166), Expect = 6e-088
Identities = 332/385 (86%), Gaps = 3/385 (0%)
Strand = Plus / Minus
Query: 1404 cgcgccaggccgtggtcgggtcgcggaactgcgtcacgttgatgccgccctcggggacga 1463
||||||||||||||||||||||||||||||||||| ||||||||||||| || || ||||
Sbjct: 438 cgcgccaggccgtggtcgggtcgcggaactgcgtcgcgttgatgccgccttccggcacga 379
Query: 1464 tgacggggttgtgcgagggcttcacccactcccggagcagcgggtccgacacgttcttcg 1523
|||| ||||||| || ||||||||||||||||||||||||||||| ||| |||| |
Sbjct: 378 tgaccgggttgtaggacggcttcacccactcccggagcagcgggtcggacttgttccgag 319
Query: 1524 ggtacgccacgttccggacctggtagttgatgtccgggtggtccacgcccgtgtacatga 1583
|||| || |||||| |||||||||||||| ||| ||| |||| | ||| ||||||||||
Sbjct: 318 ggtaggcgacgttctggacctggtagttggtgttggggcggtcgatgccggtgtacatga 259
Query: 1584 tcaccgggccgccgccgtcgggcagcaccgtcgccgacccggaccagcagccgtacctgt 1643
||||||| || ||||||||||| ||||||||| || ||||||||||||||| |||
Sbjct: 258 tcaccgg--cgt-gccgtcgggcatggtcgtcgccgagcccgaccagcagccgtacttgt 202
Query: 1644 cgcccgggatgcttggtctgagcgccggctctagcgccacccagttgatgaggtctcgcg 1703
|| |||||||| || ||| ||||||||||| |||| ||||||||||||||| || |
Sbjct: 201 cggaggggatgctgggcttgatcgccggctctaatgccatccagttgatgaggtcgcgtg 142
Query: 1704 acaccgagtgcgcccacacgatgttgccccatacggcgcccttgggattgtattggtaga 1763
| |||||||||||||| ||||||||||||||||| ||||| ||||| ||||| |||||||
Sbjct: 141 agaccgagtgcgcccatacgatgttgccccatacagcgcctttggggttgtactggtaga 82
Query: 1764 agaaatggtaccaccccttgtagta 1788
|||||||||||||||||||||||||
Sbjct: 81 agaaatggtaccaccccttgtagta 57
Score = 117 bits (59), Expect = 4e-024
Identities = 77/83 (92%)
Strand = Plus / Minus
Query: 1270 cgccgagtgcagcggccgccgcacccgcctccaccgccggaagtcgcggctacggtacac 1329
||||||||||||||||||||| |||||| ||||||||| |||||||||||| ||||||||
Sbjct: 596 cgccgagtgcagcggccgccggacccgcgtccaccgcctgaagtcgcggctccggtacac 537
Query: 1330 gtacgccacgccgcggggcggcg 1352
||||||||||| ||||||||||
Sbjct: 536 atacgccacgccccggggcggcg 514
>gb|CW262736.1|CW262736 104_730_11230244_116_35224_072 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11230244, DNA
sequence
Length = 654
Score = 325 bits (164), Expect = 9e-087
Identities = 241/268 (89%), Gaps = 9/268 (3%)
Strand = Plus / Minus
Query: 501 acttggtagggtcggtgcacatgagcaccacgggcttgtcg---------ccggcggcgg 551
|||||||||||||||||||||||||||| |||||||||| | ||||||||||
Sbjct: 568 acttggtagggtcggtgcacatgagcacgacgggcttgttgttgctgctgccggcggcgg 509
Query: 552 gcttgaacaccctgaagaacaccgcggttctctccttgcggttggcggaggccagcaccc 611
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 508 ccttgaacaccctgaagaacaccgcggttctctccttgaggttggcggaggccagcaccc 449
Query: 612 acagcccgaacggccccacgccgcccctcacgtccgcgcgcttcacgccgcacagcctct 671
||||||||||||| |||||||||||| ||||||| |||||||| ||||||||||||||||
Sbjct: 448 acagcccgaacggacccacgccgcccttcacgtcggcgcgcttgacgccgcacagcctct 389
Query: 672 ccgcgtcgtaggccagcgccgggtccagcgtctcggcaccggccagggccgccggcgaca 731
| ||||||| ||| ||||||||||||||| ||| || || |||||||||| ||||||||
Sbjct: 388 cggcgtcgtcggcgagcgccgggtccagccgctccgctcccgccagggccgacggcgaca 329
Query: 732 cttcgaagctcacctccacgtcagcctg 759
| ||||||||||||||||||||||||||
Sbjct: 328 cctcgaagctcacctccacgtcagcctg 301
>gb|CW262737.1|CW262737 104_730_11230244_148_35220_072 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11230244, DNA
sequence
Length = 638
Score = 325 bits (164), Expect = 9e-087
Identities = 241/268 (89%), Gaps = 9/268 (3%)
Strand = Plus / Plus
Query: 501 acttggtagggtcggtgcacatgagcaccacgggcttgtcg---------ccggcggcgg 551
|||||||||||||||||||||||||||| |||||||||| | ||||||||||
Sbjct: 251 acttggtagggtcggtgcacatgagcacgacgggcttgttgttgctgctgccggcggcgg 310
Query: 552 gcttgaacaccctgaagaacaccgcggttctctccttgcggttggcggaggccagcaccc 611
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 311 ccttgaacaccctgaagaacaccgcggttctctccttgaggttggcggaggccagcaccc 370
Query: 612 acagcccgaacggccccacgccgcccctcacgtccgcgcgcttcacgccgcacagcctct 671
||||||||||||| |||||||||||| ||||||| |||||||| ||||||||||||||||
Sbjct: 371 acagcccgaacggacccacgccgcccttcacgtcggcgcgcttgacgccgcacagcctct 430
Query: 672 ccgcgtcgtaggccagcgccgggtccagcgtctcggcaccggccagggccgccggcgaca 731
| ||||||| ||| ||||||||||||||| ||| || || |||||||||| ||||||||
Sbjct: 431 cggcgtcgtcggcgagcgccgggtccagccgctccgctcccgccagggccgacggcgaca 490
Query: 732 cttcgaagctcacctccacgtcagcctg 759
| ||||||||||||||||||||||||||
Sbjct: 491 cctcgaagctcacctccacgtcagcctg 518
Score = 95.6 bits (48), Expect = 2e-017
Identities = 78/88 (88%)
Strand = Plus / Plus
Query: 415 gcttctcagggatatcttgccgttcgagatgtccgtgtcgacaaatcctgcaaatgtcgg 474
||||||||| |||||||| || || || ||||||||||| ||||| || |||||||||||
Sbjct: 68 gcttctcagcgatatcttcccatttgaaatgtccgtgtcaacaaaaccggcaaatgtcgg 127
Query: 475 gcggtacaggttcgggttcagggacgac 502
|||||||||||| |||||||| ||||||
Sbjct: 128 gcggtacaggtttgggttcagagacgac 155
>gb|CW400388.1|CW400388 fsbb001f090k19f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f090k19, DNA
sequence
Length = 663
Score = 325 bits (164), Expect = 9e-087
Identities = 241/268 (89%), Gaps = 9/268 (3%)
Strand = Plus / Minus
Query: 501 acttggtagggtcggtgcacatgagcaccacgggcttgtcg---------ccggcggcgg 551
|||||||||||||||||||||||||||| |||||||||| | ||||||||||
Sbjct: 519 acttggtagggtcggtgcacatgagcacgacgggcttgttgttgctgctgccggcggcgg 460
Query: 552 gcttgaacaccctgaagaacaccgcggttctctccttgcggttggcggaggccagcaccc 611
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 459 ccttgaacaccctgaagaacaccgcggttctctccttgaggttggcggaggccagcaccc 400
Query: 612 acagcccgaacggccccacgccgcccctcacgtccgcgcgcttcacgccgcacagcctct 671
||||||||||||| |||||||||||| ||||||| |||||||| ||||||||||||||||
Sbjct: 399 acagcccgaacggacccacgccgcccttcacgtcggcgcgcttgacgccgcacagcctct 340
Query: 672 ccgcgtcgtaggccagcgccgggtccagcgtctcggcaccggccagggccgccggcgaca 731
| ||||||| ||| ||||||||||||||| ||| || || |||||||||| ||||||||
Sbjct: 339 cggcgtcgtcggcgagcgccgggtccagccgctccgctcccgccagggccgacggcgaca 280
Query: 732 cttcgaagctcacctccacgtcagcctg 759
| ||||||||||||||||||||||||||
Sbjct: 279 cctcgaagctcacctccacgtcagcctg 252
Score = 63.9 bits (32), Expect = 6e-008
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 455 acaaatcctgcaaatgtcgggcggtacaggttcgggttcagggacgac 502
||||| || ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 662 acaaaaccggcaaatgtcgggcggtacaggtttgggttcagagacgac 615
>gb|CW457045.1|CW457045 fsbb001f202l01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f202l01, DNA
sequence
Length = 288
Score = 321 bits (162), Expect = 1e-085
Identities = 239/265 (90%), Gaps = 6/265 (2%)
Strand = Plus / Minus
Query: 501 acttggtagggtcggtgcacatgagcaccacgggcttgtcgc------cggcggcgggct 554
|||||||||||||||||||||||||||| ||| |||||| || ||||||||| ||
Sbjct: 270 acttggtagggtcggtgcacatgagcacgacgtgcttgttgctgctgccggcggcggcct 211
Query: 555 tgaacaccctgaagaacaccgcggttctctccttgcggttggcggaggccagcacccaca 614
||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 210 tgaacaccctgaagaacaccgcggtcctctccttgaggttggcggaggccagcacccaca 151
Query: 615 gcccgaacggccccacgccgcccctcacgtccgcgcgcttcacgccgcacagcctctccg 674
|||||||||| |||||||||||| ||||||| |||||||| ||||||||||||||||| |
Sbjct: 150 gcccgaacggacccacgccgcccttcacgtcggcgcgcttgacgccgcacagcctctcgg 91
Query: 675 cgtcgtaggccagcgccgggtccagcgtctcggcaccggccagggccgccggcgacactt 734
|||||| ||| ||||||||||||||| ||| || || |||||||||| ||||||||| |
Sbjct: 90 cgtcgtcggcgagcgccgggtccagccgctccgctcccgccagggccgacggcgacacct 31
Query: 735 cgaagctcacctccacgtcagcctg 759
|||||||||||||||||||||||||
Sbjct: 30 cgaagctcacctccacgtcagcctg 6
>gb|CW449570.1|CW449570 fsbb001f183m13f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f183m13, DNA
sequence
Length = 602
Score = 301 bits (152), Expect = 1e-079
Identities = 321/375 (85%), Gaps = 3/375 (0%)
Strand = Plus / Minus
Query: 1414 cgtggtcgggtcgcggaactgcgtcacgttgatgccgccctcggggacgatgacggggtt 1473
||||||||||||||||||||||||| ||||||||||||| || || |||||||| |||||
Sbjct: 602 cgtggtcgggtcgcggaactgcgtcgcgttgatgccgccttccggcacgatgaccgggtt 543
Query: 1474 gtgcgagggcttcacccactcccggagcagcgggtccgacacgttcttcgggtacgccac 1533
|| || |||||||| |||||||||||||||||||| ||| |||| ||||| || ||
Sbjct: 542 gtaggacggcttcacacactcccggagcagcgggtcggacttgttccgagggtaggcgac 483
Query: 1534 gttccggacctggtagttgatgtccgggtggtccacgcccgtgtacatgatcaccgggcc 1593
|||| |||||||||||||| ||| ||| |||| | ||| ||||||||||||||||| |
Sbjct: 482 gttctggacctggtagttggtgttggggcggtcgatgccggtgtacatgatcaccgg--c 425
Query: 1594 gccgccgtcgggcagcaccgtcgccgacccggaccagcagccgtacctgtcgcccgggat 1653
| ||||||||||| ||||||||| || ||||||||||||||| ||||| |||||
Sbjct: 424 gt-gccgtcgggcatggtcgtcgccgagcccgaccagcagccgtacttgtcggaggggat 366
Query: 1654 gcttggtctgagcgccggctctagcgccacccagttgatgaggtctcgcgacaccgagtg 1713
||| || ||| ||||||||||| |||| ||||||||||||||| || || ||||||||
Sbjct: 365 gctgggcttgatcgccggctctaatgccatccagttgatgaggtcgcgtgagaccgagtg 306
Query: 1714 cgcccacacgatgttgccccatacggcgcccttgggattgtattggtagaagaaatggta 1773
|||||| ||||||||||||||||| ||||| ||||| ||||| |||||||||||||||||
Sbjct: 305 cgcccatacgatgttgccccatacagcgcctttggggttgtactggtagaagaaatggta 246
Query: 1774 ccaccccttgtagta 1788
|||||||||||||||
Sbjct: 245 ccaccccttgtagta 231
>gb|CW469126.1|CW469126 fsbb001f221l01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f221l01, DNA
sequence
Length = 270
Score = 299 bits (151), Expect = 5e-079
Identities = 202/219 (92%)
Strand = Plus / Minus
Query: 541 gccggcggcgggcttgaacaccctgaagaacaccgcggttctctccttgcggttggcgga 600
||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 236 gccggcggcggccttgaacaccctgaagaacaccgcggtcctctccttgaggttggcgga 177
Query: 601 ggccagcacccacagcccgaacggccccacgccgcccctcacgtccgcgcgcttcacgcc 660
|||||||||||||||||||||||| |||||||||||| ||||||| |||||||| |||||
Sbjct: 176 ggccagcacccacagcccgaacggacccacgccgcccttcacgtcggcgcgcttgacgcc 117
Query: 661 gcacagcctctccgcgtcgtaggccagcgccgggtccagcgtctcggcaccggccagggc 720
|||||||||||| ||||||| ||| ||||||||||||||| ||| || || ||||||||
Sbjct: 116 gcacagcctctcggcgtcgtcggcgagcgccgggtccagccgctccgctcccgccagggc 57
Query: 721 cgccggcgacacttcgaagctcacctccacgtcagcctg 759
|| ||||||||| ||||||||||||||||||||||||||
Sbjct: 56 cgacggcgacacctcgaagctcacctccacgtcagcctg 18
>gb|CW498973.1|CW498973 fsbb001f293i01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f293i01, DNA
sequence
Length = 595
Score = 274 bits (138), Expect = 3e-071
Identities = 212/237 (89%), Gaps = 6/237 (2%)
Strand = Plus / Minus
Query: 501 acttggtagggtcggtgcacatgagcaccacgggcttgtcgc------cggcggcgggct 554
|||||||||||||||||||||||||||| ||| |||||| || ||||||||| ||
Sbjct: 237 acttggtagggtcggtgcacatgagcacgacgtgcttgttgctgctgccggcggcggcct 178
Query: 555 tgaacaccctgaagaacaccgcggttctctccttgcggttggcggaggccagcacccaca 614
||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 177 tgaacaccctgaagaacaccgcggtcctctccttgaggttggcggaggccagcacccaca 118
Query: 615 gcccgaacggccccacgccgcccctcacgtccgcgcgcttcacgccgcacagcctctccg 674
|||||||||| |||||||||||| ||||||| |||||||| ||||||||||||||||| |
Sbjct: 117 gcccgaacggacccacgccgcccttcacgtcggcgcgcttgacgccgcacagcctctcgg 58
Query: 675 cgtcgtaggccagcgccgggtccagcgtctcggcaccggccagggccgccggcgaca 731
|||||| ||| ||||||||||||||| ||| || || |||||||||| ||||||||
Sbjct: 57 cgtcgtcggcgagcgccgggtccagccgctccgctcccgccagggccgacggcgaca 1
Score = 91.7 bits (46), Expect = 2e-016
Identities = 76/86 (88%)
Strand = Plus / Minus
Query: 417 ttctcagggatatcttgccgttcgagatgtccgtgtcgacaaatcctgcaaatgtcgggc 476
||||||| |||||||| || || || ||||||||||| ||||| |||||||| |||||||
Sbjct: 504 ttctcagcgatatcttcccatttgaaatgtccgtgtcaacaaaacctgcaaacgtcgggc 445
Query: 477 ggtacaggttcgggttcagggacgac 502
|||||||||| |||||||| ||||||
Sbjct: 444 ggtacaggtttgggttcagagacgac 419
>gb|CW050896.1|CW050896 104_291_10514924_114_30192 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10514924, DNA
sequence
Length = 308
Score = 258 bits (130), Expect = 2e-066
Identities = 178/194 (91%)
Strand = Plus / Minus
Query: 978 cccacaggatgcggcgccgcttggccgggtcgtagaacgtcttggacgcgtagaagttgc 1037
|||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 308 cccacaggatccgccgccgcttcgccgggtcgtagaacgtcttggacgcgtagaagttgc 249
Query: 1038 cgtagtcgtagcgcaggcggtgctcgtcgccggcggggtcgtccggcacgtaccgctcgg 1097
|||||||||| |||||| || ||||||||||||||||||||||||||||||||||||| |
Sbjct: 248 cgtagtcgtaccgcaggtggcgctcgtcgccggcggggtcgtccggcacgtaccgctccg 189
Query: 1098 ccctcgggtggtacgtgcccacggtgtagtagtcgtaccgccggaggtcgaggctgttct 1157
|| ||||| ||||||||| | ||||||||||||||||||||| ||||| ||||||||||
Sbjct: 188 ccgccgggtcgtacgtgccgatggtgtagtagtcgtaccgccgcaggtccaggctgttct 129
Query: 1158 tgagcacgtgcttg 1171
| ||||||| ||||
Sbjct: 128 tcagcacgtacttg 115
Score = 54.0 bits (27), Expect = 5e-005
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 1234 cgggtagaagtcagggcactcccacatcccc 1264
|||||||||||| ||||||||||||||||||
Sbjct: 31 cgggtagaagtccgggcactcccacatcccc 1
>gb|CL181798.1|CL181798 104_392_10896983_148_31925_359 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10896983, DNA
sequence
Length = 684
Score = 256 bits (129), Expect = 7e-066
Identities = 165/177 (93%)
Strand = Plus / Plus
Query: 236 ttcatgaccggcttcttcatctcccacgcggtgagacgggacaccttgacgtgcgccctc 295
||||||| ||||||||||||||||| |||||||||| |||||||||||||| |||| ||
Sbjct: 101 ttcatgagtggcttcttcatctcccatgcggtgagactggacaccttgacgtccgccttc 160
Query: 296 ccgttgttgaacacgtagaggcgagcgtccttgccgatggccagcgacgggtagaccctg 355
||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||
Sbjct: 161 ccgttgttgaacacgtagaggcgggcgttcttgccgatggcgagcgacgggtagaccctg 220
Query: 356 gagaggatgcaggtcttgcccccggctccgaagctctcaacgaccgaccggtcgatc 412
||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 221 gagaggatgcacgtcttgcccccggctccaaagctctcaacaaccgaccggtcgatc 277
Score = 65.9 bits (33), Expect = 1e-008
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 415 gcttctcagggatatcttgccgttcgagatgtccgtgtcgacaaatcctgcaaatgtcgg 474
||||||||| || ||||||||||| || ||||| ||| | ||||| |||||||| |||||
Sbjct: 390 gcttctcagagagatcttgccgttagaaatgtctgtgaccacaaaacctgcaaacgtcgg 449
Query: 475 gcggtacaggttcgggt 491
|||||||||||||||
Sbjct: 450 ctggtacaggttcgggt 466
>gb|CW306883.1|CW306883 104_792_11467079_148_35713_084 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11467079, DNA
sequence
Length = 624
Score = 256 bits (129), Expect = 7e-066
Identities = 165/177 (93%)
Strand = Plus / Minus
Query: 236 ttcatgaccggcttcttcatctcccacgcggtgagacgggacaccttgacgtgcgccctc 295
||||||| ||||||||||||||||| |||||||||| |||||||||||||| |||| ||
Sbjct: 284 ttcatgagtggcttcttcatctcccatgcggtgagactggacaccttgacgtccgccttc 225
Query: 296 ccgttgttgaacacgtagaggcgagcgtccttgccgatggccagcgacgggtagaccctg 355
||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||
Sbjct: 224 ccgttgttgaacacgtagaggcgggcgttcttgccgatggcgagcgacgggtagaccctg 165
Query: 356 gagaggatgcaggtcttgcccccggctccgaagctctcaacgaccgaccggtcgatc 412
||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 164 gagaggatgcacgtcttgcccccggctccaaagctctcaacaaccgaccggtcgatc 108
>gb|CW231621.1|CW231621 104_681_11211220_116_37346_016 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11211220, DNA
sequence
Length = 633
Score = 238 bits (120), Expect = 2e-060
Identities = 168/184 (91%)
Strand = Plus / Plus
Query: 229 ggccccgttcatgaccggcttcttcatctcccacgcggtgagacgggacaccttgacgtg 288
||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 159 ggccccgttcatgaccggcttcttcatctcccatgcgatgagacgggacaccttgacgtc 218
Query: 289 cgccctcccgttgttgaacacgtagaggcgagcgtccttgccgatggccagcgacgggta 348
|||||||||||||||||||||||||||| |||| | ||||||||||| |||||||||||
Sbjct: 219 cgccctcccgttgttgaacacgtagaggtgagccttgttgccgatggcaagcgacgggta 278
Query: 349 gaccctggagaggatgcaggtcttgcccccggctccgaagctctcaacgaccgaccggtc 408
||||||||||||||||| || ||||| || ||||| ||||||||||| ||||||| |||
Sbjct: 279 caccctggagaggatgcacgttttgcctccagctccaaagctctcaacaaccgacctgtc 338
Query: 409 gatc 412
||||
Sbjct: 339 gatc 342
Score = 91.7 bits (46), Expect = 2e-016
Identities = 76/86 (88%)
Strand = Plus / Plus
Query: 417 ttctcagggatatcttgccgttcgagatgtccgtgtcgacaaatcctgcaaatgtcgggc 476
||||||| |||||||| || || || ||||||||||| ||||| |||||||| |||||||
Sbjct: 447 ttctcagcgatatcttcccatttgaaatgtccgtgtcaacaaaacctgcaaacgtcgggc 506
Query: 477 ggtacaggttcgggttcagggacgac 502
|||||||||| |||||||| ||||||
Sbjct: 507 ggtacaggtttgggttcagagacgac 532
>gb|CW231622.1|CW231622 104_681_11211220_148_37350_016 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11211220, DNA
sequence
Length = 688
Score = 238 bits (120), Expect = 2e-060
Identities = 168/184 (91%)
Strand = Plus / Minus
Query: 229 ggccccgttcatgaccggcttcttcatctcccacgcggtgagacgggacaccttgacgtg 288
||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 553 ggccccgttcatgaccggcttcttcatctcccatgcgatgagacgggacaccttgacgtc 494
Query: 289 cgccctcccgttgttgaacacgtagaggcgagcgtccttgccgatggccagcgacgggta 348
|||||||||||||||||||||||||||| |||| | ||||||||||| |||||||||||
Sbjct: 493 cgccctcccgttgttgaacacgtagaggtgagccttgttgccgatggcaagcgacgggta 434
Query: 349 gaccctggagaggatgcaggtcttgcccccggctccgaagctctcaacgaccgaccggtc 408
||||||||||||||||| || ||||| || ||||| ||||||||||| ||||||| |||
Sbjct: 433 caccctggagaggatgcacgttttgcctccagctccaaagctctcaacaaccgacctgtc 374
Query: 409 gatc 412
||||
Sbjct: 373 gatc 370
Score = 91.7 bits (46), Expect = 2e-016
Identities = 76/86 (88%)
Strand = Plus / Minus
Query: 417 ttctcagggatatcttgccgttcgagatgtccgtgtcgacaaatcctgcaaatgtcgggc 476
||||||| |||||||| || || || ||||||||||| ||||| |||||||| |||||||
Sbjct: 265 ttctcagcgatatcttcccatttgaaatgtccgtgtcaacaaaacctgcaaacgtcgggc 206
Query: 477 ggtacaggttcgggttcagggacgac 502
|||||||||| |||||||| ||||||
Sbjct: 205 ggtacaggtttgggttcagagacgac 180
>gb|CW457046.1|CW457046 fsbb001f202l01k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f202l01, DNA
sequence
Length = 775
Score = 238 bits (120), Expect = 2e-060
Identities = 168/184 (91%)
Strand = Plus / Plus
Query: 229 ggccccgttcatgaccggcttcttcatctcccacgcggtgagacgggacaccttgacgtg 288
||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 430 ggccccgttcatgaccggcttcttcatctcccatgcgatgagacgggacaccttgacgtc 489
Query: 289 cgccctcccgttgttgaacacgtagaggcgagcgtccttgccgatggccagcgacgggta 348
|||||||||||||||||||||||||||| |||| | ||||||||||| |||||||||||
Sbjct: 490 cgccctcccgttgttgaacacgtagaggtgagccttgttgccgatggcaagcgacgggta 549
Query: 349 gaccctggagaggatgcaggtcttgcccccggctccgaagctctcaacgaccgaccggtc 408
||||||||||||||||| || ||||| || ||||| ||||||||||| ||||||| |||
Sbjct: 550 caccctggagaggatgcacgttttgcctccagctccaaagctctcaacaaccgacctgtc 609
Query: 409 gatc 412
||||
Sbjct: 610 gatc 613
>gb|CW498974.1|CW498974 fsbb001f293i01k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f293i01, DNA
sequence
Length = 659
Score = 238 bits (120), Expect = 2e-060
Identities = 168/184 (91%)
Strand = Plus / Plus
Query: 229 ggccccgttcatgaccggcttcttcatctcccacgcggtgagacgggacaccttgacgtg 288
||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 344 ggccccgttcatgaccggcttcttcatctcccatgcgatgagacgggacaccttgacgtc 403
Query: 289 cgccctcccgttgttgaacacgtagaggcgagcgtccttgccgatggccagcgacgggta 348
|||||||||||||||||||||||||||| |||| | ||||||||||| |||||||||||
Sbjct: 404 cgccctcccgttgttgaacacgtagaggtgagccttgttgccgatggcaagcgacgggta 463
Query: 349 gaccctggagaggatgcaggtcttgcccccggctccgaagctctcaacgaccgaccggtc 408
||||||||||||||||| || ||||| || ||||| ||||||||||| ||||||| |||
Sbjct: 464 caccctggagaggatgcacgttttgcctccagctccaaagctctcaacaaccgacctgtc 523
Query: 409 gatc 412
||||
Sbjct: 524 gatc 527
>gb|CW156831.1|CW156831 104_560_11146901_148_36380_031 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11146901, DNA
sequence
Length = 712
Score = 230 bits (116), Expect = 4e-058
Identities = 161/176 (91%)
Strand = Plus / Plus
Query: 584 tccttgcggttggcggaggccagcacccacagcccgaacggccccacgccgcccctcacg 643
|||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 1 tccttgaggttggcggaggccagcacccacagcccgaacggacccacgccgcccttcacg 60
Query: 644 tccgcgcgcttcacgccgcacagcctctccgcgtcgtaggccagcgccgggtccagcgtc 703
|| |||||||| ||||||||||||||||| ||||||| ||| ||||||||||||||| |
Sbjct: 61 tcggcgcgcttgacgccgcacagcctctcggcgtcgtcggcgagcgccgggtccagccgc 120
Query: 704 tcggcaccggccagggccgccggcgacacttcgaagctcacctccacgtcagcctg 759
|| || || |||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 121 tccgctcccgccagggccgacggcgacacctcgaagctcacctccacgtcagcctg 176
Score = 73.8 bits (37), Expect = 6e-011
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 756 cctgtgccgtttgtatcccggtcacctcgacgtgatgtcctgccttgat 804
||||||| |||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 664 cctgtgctgtttgtatcccggtcacctcgacgtgctgtcctggcttgat 712
>gb|CW449571.1|CW449571 fsbb001f183m13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f183m13, DNA
sequence
Length = 499
Score = 224 bits (113), Expect = 3e-056
Identities = 164/181 (90%)
Strand = Plus / Plus
Query: 756 cctgtgccgtttgtatcccggtcacctcgacgtgatgtcctgccttgattaccctgttcc 815
||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 311 cctgtgctgtttgtatcccggtcacctcgacgtgctgtcctggcttgattaccctgttct 370
Query: 816 tgagagtgaccgactttgctctcagcgcctccacctcctcgataggccactgcagcagct 875
|||||||||||| ||| |||| |||||||| |||||||||| ||||||||||||||||
Sbjct: 371 tgagagtgaccgccttgcctctgagcgcctctacctcctcgacgggccactgcagcagct 430
Query: 876 gcttcccactggggtccagccacaccgtccttggaatcgcctggattccagcccagcctt 935
||||||| ||||||||||||||||||||||| ||||||||||| || || ||||| ||||
Sbjct: 431 gcttcccgctggggtccagccacaccgtcctcggaatcgcctgaatcccggcccaccctt 490
Query: 936 t 936
|
Sbjct: 491 t 491
>gb|CW156830.1|CW156830 104_560_11146901_116_36379_031 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11146901, DNA
sequence
Length = 693
Score = 218 bits (110), Expect = 2e-054
Identities = 176/198 (88%)
Strand = Plus / Minus
Query: 756 cctgtgccgtttgtatcccggtcacctcgacgtgatgtcctgccttgattaccctgttcc 815
||||||| ||||||||||||||||||| |||||| ||||||| ||||||||||||||||
Sbjct: 198 cctgtgctgtttgtatcccggtcacctagacgtgctgtcctggcttgattaccctgttct 139
Query: 816 tgagagtgaccgactttgctctcagcgcctccacctcctcgataggccactgcagcagct 875
|||||||||||| ||| |||| |||||||| |||||||||| ||||||||||||||||
Sbjct: 138 tgagagtgaccgccttgcctctgagcgcctctacctcctcgacgggccactgcagcagct 79
Query: 876 gcttcccactggggtccagccacaccgtccttggaatcgcctggattccagcccagcctt 935
||||||| ||||||||||||||||||||||| ||||||||||| || || ||||| | ||
Sbjct: 78 gcttcccgctggggtccagccacaccgtcctcggaatcgcctgaatcccggcccaccatt 19
Query: 936 tagccacatcgtcggcgg 953
|| |||||||||||||
Sbjct: 18 gggcgacatcgtcggcgg 1
>gb|CW151042.1|CW151042 104_551_11143730_148_36309_003 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11143730, DNA
sequence
Length = 554
Score = 216 bits (109), Expect = 6e-054
Identities = 160/177 (90%)
Strand = Plus / Plus
Query: 236 ttcatgaccggcttcttcatctcccacgcggtgagacgggacaccttgacgtgcgccctc 295
||||||| ||||||||||||||||| || ||||||||||||||| |||||| |||| ||
Sbjct: 202 ttcatgagtggcttcttcatctcccatgcagtgagacgggacaccctgacgtccgccttc 261
Query: 296 ccgttgttgaacacgtagaggcgagcgtccttgccgatggccagcgacgggtagaccctg 355
||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 262 ccgttgttgaacacgtagaggcgcgcgttgttgccgatggcgagcgacgggtagaccctg 321
Query: 356 gagaggatgcaggtcttgcccccggctccgaagctctcaacgaccgaccggtcgatc 412
|| |||||||| ||||||||||||||||| |||||||| || ||||| |||||||||
Sbjct: 322 gacaggatgcacgtcttgcccccggctccaaagctctccaccaccgagcggtcgatc 378
Score = 83.8 bits (42), Expect = 6e-014
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 415 gcttctcagggatatcttgccgttcgagatgtccgtgtcgacaaatcctgcaaatgtcgg 474
||||||||| |||||||| || || || ||||||||||| ||||| || |||||||||||
Sbjct: 477 gcttctcagcgatatcttcccatttgaaatgtccgtgtcaacaaaaccggcaaatgtcgg 536
Query: 475 gcggtacaggttcgggtt 492
|||||||||||| |||||
Sbjct: 537 gcggtacaggtttgggtt 554
>gb|CW400389.1|CW400389 fsbb001f090k19k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f090k19, DNA
sequence
Length = 753
Score = 216 bits (109), Expect = 6e-054
Identities = 160/177 (90%)
Strand = Plus / Plus
Query: 236 ttcatgaccggcttcttcatctcccacgcggtgagacgggacaccttgacgtgcgccctc 295
||||||| ||||||||||||||||| || ||||||||||||||| |||||| |||| ||
Sbjct: 452 ttcatgagtggcttcttcatctcccatgcagtgagacgggacaccctgacgtccgccttc 511
Query: 296 ccgttgttgaacacgtagaggcgagcgtccttgccgatggccagcgacgggtagaccctg 355
||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 512 ccgttgttgaacacgtagaggcgcgcgttgttgccgatggcgagcgacgggtagaccctg 571
Query: 356 gagaggatgcaggtcttgcccccggctccgaagctctcaacgaccgaccggtcgatc 412
|| |||||||| ||||||||||||||||| |||||||| || ||||| |||||||||
Sbjct: 572 gacaggatgcacgtcttgcccccggctccaaagctctccaccaccgagcggtcgatc 628
>gb|CW065110.1|CW065110 104_311_10522954_115_30121 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10522954, DNA
sequence
Length = 583
Score = 210 bits (106), Expect = 4e-052
Identities = 136/146 (93%)
Strand = Plus / Plus
Query: 236 ttcatgaccggcttcttcatctcccacgcggtgagacgggacaccttgacgtgcgccctc 295
||||||| ||||||||||||||||| |||||||||| |||||||||||||| |||| ||
Sbjct: 438 ttcatgagtggcttcttcatctcccatgcggtgagactggacaccttgacgtccgccttc 497
Query: 296 ccgttgttgaacacgtagaggcgagcgtccttgccgatggccagcgacgggtagaccctg 355
||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||
Sbjct: 498 ccgttgttgaacacgtagaggcgggcgttcttgccgatggcgagcgacgggtagaccctg 557
Query: 356 gagaggatgcaggtcttgcccccggc 381
||||||||||| ||||||||||||||
Sbjct: 558 gagaggatgcacgtcttgcccccggc 583
>gb|CD227732.1|CD227732 CCC1_53_H10.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_53_H10_A007 5', mRNA sequence
Length = 640
Score = 206 bits (104), Expect = 6e-051
Identities = 327/399 (81%), Gaps = 3/399 (0%)
Strand = Plus / Minus
Query: 1481 ggcttcacccactcccggagcagcgggtccgacacgttcttcgggtacgccacgttccgg 1540
|||||| |||||||||||||||||||||||||| ||||||| ||| | || | | |
Sbjct: 581 ggcttctcccactcccggagcagcgggtccgacgcgttcttggggaaggcgagcacctgc 522
Query: 1541 acctggtagttgatgtccgggtggtccacgcccgtgtacatgatcaccgggccgccgccg 1600
||||||||||||||||||||| ||| | || ||||| | |||| |||| || ||||
Sbjct: 521 acctggtagttgatgtccgggcggttgatcccagtgtagaggatcgccgg--cgt-gccg 465
Query: 1601 tcgggcagcaccgtcgccgacccggaccagcagccgtacctgtcgcccgggatgcttggt 1660
|| |||||| ||||||||| || ||||||||||||||| |||| |||||||| ||
Sbjct: 464 tcttgcagcatcgtcgccgagcccgaccagcagccgtactggtcggaggggatgctcggg 405
Query: 1661 ctgagcgccggctctagcgccacccagttgatgaggtctcgcgacaccgagtgcgcccac 1720
|| || ||||| ||||| | ||||||||||||||| || || | ||||| ||||||
Sbjct: 404 tagatggcgggctccagcgcgatccagttgatgaggtcgcgtgatatggagtgagcccac 345
Query: 1721 acgatgttgccccatacggcgcccttgggattgtattggtagaagaaatggtaccacccc 1780
||||||||||||||||| ||||||||||| ||||| |||||||| | || ||||| |||
Sbjct: 344 acgatgttgccccatactgcgcccttggggttgtactggtagaacaggtgataccatccc 285
Query: 1781 ttgtagtacatgggcgcgttgggatcattgatccagttcttggggggctggaagtggtac 1840
||||||||||| || |||||||| || |||||||||||| | || |||||||| ||||||
Sbjct: 284 ttgtagtacatcggagcgttggggtcgttgatccagttcattggtggctggaaatggtac 225
Query: 1841 cccgtcctgagcagggggttgacgatggacggcggcacc 1879
|| ||||||||||||||| |||| ||||| | |||||||
Sbjct: 224 cctgtcctgagcagggggctgacaatggaggccggcacc 186
Score = 50.1 bits (25), Expect = 8e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1425 cgcggaactgcgtcacgttgatgccgccc 1453
|||||||||||||| ||||||||||||||
Sbjct: 640 cgcggaactgcgtcgcgttgatgccgccc 612
>gb|CD228117.1|CD228117 CCC1_5_A09.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_5_A09_A007 5', mRNA sequence
Length = 608
Score = 202 bits (102), Expect = 9e-050
Identities = 319/389 (82%), Gaps = 3/389 (0%)
Strand = Plus / Minus
Query: 1481 ggcttcacccactcccggagcagcgggtccgacacgttcttcgggtacgccacgttccgg 1540
|||||| |||||||||||||||||||||||||| ||||||| ||| | || | | |
Sbjct: 400 ggcttctcccactcccggagcagcgggtccgacgcgttcttggggaaggcgagcacctgc 341
Query: 1541 acctggtagttgatgtccgggtggtccacgcccgtgtacatgatcaccgggccgccgccg 1600
||||||||||||||||||||| ||| | || ||||| | |||| |||| || ||||
Sbjct: 340 acctggtagttgatgtccgggcggttgatcccagtgtagaggatcgccgg--cgt-gccg 284
Query: 1601 tcgggcagcaccgtcgccgacccggaccagcagccgtacctgtcgcccgggatgcttggt 1660
|| |||||| ||||||||| || ||||||||||||||| |||| |||||||| ||
Sbjct: 283 tcttgcagcatcgtcgccgagcccgaccagcagccgtactggtcggaggggatgctcggg 224
Query: 1661 ctgagcgccggctctagcgccacccagttgatgaggtctcgcgacaccgagtgcgcccac 1720
|| || ||||| ||||| | ||||||||||||||| || || | ||||| ||||||
Sbjct: 223 tagatggcgggctccagcgcgatccagttgatgaggtcgcgtgatatggagtgagcccac 164
Query: 1721 acgatgttgccccatacggcgcccttgggattgtattggtagaagaaatggtaccacccc 1780
||||||||||||||||| ||||||||||| ||||| |||||||| | || ||||| |||
Sbjct: 163 acgatgttgccccatactgcgcccttggggttgtactggtagaacaggtgataccatccc 104
Query: 1781 ttgtagtacatgggcgcgttgggatcattgatccagttcttggggggctggaagtggtac 1840
||||||||||| || |||||||| || |||||||||||| | || |||||||| ||||||
Sbjct: 103 ttgtagtacatcggagcgttggggtcgttgatccagttcattggtggctggaaatggtac 44
Query: 1841 cccgtcctgagcagggggttgacgatgga 1869
|| ||||||||||||||| |||| |||||
Sbjct: 43 cctgtcctgagcagggggctgacaatgga 15
Score = 67.9 bits (34), Expect = 4e-009
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 1412 gccgtggtcgggtcgcggaactgcgtcacgttgatgccgccc 1453
||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 472 gccgtcgtcgggtcgcggaactgcgtcgcgttgatgccgccc 431
>gb|CW022071.1|CW022071 104_161_10431625_1_30006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10431625, DNA
sequence
Length = 365
Score = 198 bits (100), Expect = 1e-048
Identities = 160/180 (88%)
Strand = Plus / Minus
Query: 756 cctgtgccgtttgtatcccggtcacctcgacgtgatgtcctgccttgattaccctgttcc 815
|||||||||| |||||||||||||||| ||| || || ||||||||||||| | | ||||
Sbjct: 183 cctgtgccgtctgtatcccggtcaccttgacatggtgccctgccttgattatcgtcttcc 124
Query: 816 tgagagtgaccgactttgctctcagcgcctccacctcctcgataggccactgcagcagct 875
||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 123 cgagagtgaccgccttgcttctgagcgcctccacctcctcgataggccactgcagcagct 64
Query: 876 gcttcccactggggtccagccacaccgtccttggaatcgcctggattccagcccagcctt 935
||||||| ||||||||||||||||||||||| ||||||||||| || || ||||| ||||
Sbjct: 63 gcttcccgctggggtccagccacaccgtcctcggaatcgcctgaatcccggcccaccctt 4
>gb|CD222254.1|CD222254 CCC1_2_E04.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_2_E04_A007 5', mRNA sequence
Length = 626
Score = 198 bits (100), Expect = 1e-048
Identities = 326/399 (81%), Gaps = 3/399 (0%)
Strand = Plus / Minus
Query: 1481 ggcttcacccactcccggagcagcgggtccgacacgttcttcgggtacgccacgttccgg 1540
|||||| |||||||||||||||||||||||||| ||||||| ||| | || | | |
Sbjct: 578 ggcttctcccactcccggagcagcgggtccgacgcgttcttggggaaggcgagcacctgc 519
Query: 1541 acctggtagttgatgtccgggtggtccacgcccgtgtacatgatcaccgggccgccgccg 1600
||||||||||||||||||||| ||| | || ||||| | |||| |||| || ||||
Sbjct: 518 acctggtagttgatgtccgggcggttgatcccagtgtagaggatcgccgg--cgt-gccg 462
Query: 1601 tcgggcagcaccgtcgccgacccggaccagcagccgtacctgtcgcccgggatgcttggt 1660
|| |||||| ||||||||| || ||||||||||||||| |||| |||||||| ||
Sbjct: 461 tcttgcagcatcgtcgccgagcccgaccagcagccgtactggtcggaggggatgctcggg 402
Query: 1661 ctgagcgccggctctagcgccacccagttgatgaggtctcgcgacaccgagtgcgcccac 1720
|| || ||||| ||||| | ||||||||||||||| || || | ||||| ||||||
Sbjct: 401 tagatggcgggctccagcgcgatccagttgatgaggtcgcgtgatatggagtgagcccac 342
Query: 1721 acgatgttgccccatacggcgcccttgggattgtattggtagaagaaatggtaccacccc 1780
||||||||||||||||| |||||| |||| ||||| |||||||| | || ||||| |||
Sbjct: 341 acgatgttgccccatactgcgcccctggggttgtactggtagaacaggtgataccatccc 282
Query: 1781 ttgtagtacatgggcgcgttgggatcattgatccagttcttggggggctggaagtggtac 1840
||||||||||| || |||||||| || |||||||||||| | || |||||||| ||||||
Sbjct: 281 ttgtagtacatcggagcgttggggtcgttgatccagttcattggtggctggaaatggtac 222
Query: 1841 cccgtcctgagcagggggttgacgatggacggcggcacc 1879
|| ||||||||||||||| |||| ||||| | |||||||
Sbjct: 221 cctgtcctgagcagggggctgacaatggaggccggcacc 183
>gb|CD227907.1|CD227907 CCC1_56_C12.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_56_C12_A007 5', mRNA sequence
Length = 640
Score = 198 bits (100), Expect = 1e-048
Identities = 326/399 (81%), Gaps = 3/399 (0%)
Strand = Plus / Minus
Query: 1481 ggcttcacccactcccggagcagcgggtccgacacgttcttcgggtacgccacgttccgg 1540
|||||| |||||||||||||||||||||||||| ||||||| ||| | || | | |
Sbjct: 581 ggcttctcccactcccggagcagcgggtccgacgcgttcttggggaaggcgagcacctgc 522
Query: 1541 acctggtagttgatgtccgggtggtccacgcccgtgtacatgatcaccgggccgccgccg 1600
||||||||||||||||||||| ||| | || ||||| | |||| |||| || ||||
Sbjct: 521 acctggtagttgatgtccgggcggttgatcccagtgtagaggatcgccgg--cgt-gccg 465
Query: 1601 tcgggcagcaccgtcgccgacccggaccagcagccgtacctgtcgcccgggatgcttggt 1660
|| |||||| ||||||||| || ||||||||||||||| |||| |||||||| ||
Sbjct: 464 tcttgcagcatcgtcgccgagcccgaccagcagccgtactggtcggaggggatgctcggg 405
Query: 1661 ctgagcgccggctctagcgccacccagttgatgaggtctcgcgacaccgagtgcgcccac 1720
|| || ||||| ||||| | ||||||||||||||| || || | ||||| ||||||
Sbjct: 404 tagatggcgggctccagcgcgatccagttgatgaggtcgcgtgatatggagtgagcccac 345
Query: 1721 acgatgttgccccatacggcgcccttgggattgtattggtagaagaaatggtaccacccc 1780
||||||||||||||||| ||||||| ||| ||||| |||||||| | || ||||| |||
Sbjct: 344 acgatgttgccccatactgcgccctcggggttgtactggtagaacaggtgataccatccc 285
Query: 1781 ttgtagtacatgggcgcgttgggatcattgatccagttcttggggggctggaagtggtac 1840
||||||||||| || |||||||| || |||||||||||| | || |||||||| ||||||
Sbjct: 284 ttgtagtacatcggagcgttggggtcgttgatccagttcattggtggctggaaatggtac 225
Query: 1841 cccgtcctgagcagggggttgacgatggacggcggcacc 1879
|| ||||||||||||||| |||| ||||| | |||||||
Sbjct: 224 cctgtcctgagcagggggctgacaatggaggccggcacc 186
Score = 50.1 bits (25), Expect = 8e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1425 cgcggaactgcgtcacgttgatgccgccc 1453
|||||||||||||| ||||||||||||||
Sbjct: 640 cgcggaactgcgtcgcgttgatgccgccc 612
>gb|CF074446.1|CF074446 FE1_24_E03.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_24_E03_A002 5', mRNA sequence
Length = 643
Score = 198 bits (100), Expect = 1e-048
Identities = 326/399 (81%), Gaps = 3/399 (0%)
Strand = Plus / Minus
Query: 1481 ggcttcacccactcccggagcagcgggtccgacacgttcttcgggtacgccacgttccgg 1540
|||||| |||||||||||||||||||||| ||| ||||||| ||| | || | | |
Sbjct: 586 ggcttctcccactcccggagcagcgggtcagacgcgttcttggggaaggcgagcacctgc 527
Query: 1541 acctggtagttgatgtccgggtggtccacgcccgtgtacatgatcaccgggccgccgccg 1600
||||||||||||||||||||| ||| | || ||||| | |||| |||| || ||||
Sbjct: 526 acctggtagttgatgtccgggcggttgatcccagtgtagaggatcgccgg--cgt-gccg 470
Query: 1601 tcgggcagcaccgtcgccgacccggaccagcagccgtacctgtcgcccgggatgcttggt 1660
|| |||||| ||||||||| || ||||||||||||||| |||| |||||||| ||
Sbjct: 469 tcttgcagcatcgtcgccgagcccgaccagcagccgtactggtcggaggggatgctcggg 410
Query: 1661 ctgagcgccggctctagcgccacccagttgatgaggtctcgcgacaccgagtgcgcccac 1720
|| || ||||| ||||| | ||||||||||||||| || || | ||||| ||||||
Sbjct: 409 tagatggcgggctccagcgcgatccagttgatgaggtcgcgtgatatggagtgagcccac 350
Query: 1721 acgatgttgccccatacggcgcccttgggattgtattggtagaagaaatggtaccacccc 1780
||||||||||||||||| ||||||||||| ||||| |||||||| | || ||||| |||
Sbjct: 349 acgatgttgccccatactgcgcccttggggttgtactggtagaacaggtgataccatccc 290
Query: 1781 ttgtagtacatgggcgcgttgggatcattgatccagttcttggggggctggaagtggtac 1840
||||||||||| || |||||||| || |||||||||||| | || |||||||| ||||||
Sbjct: 289 ttgtagtacatcggagcgttggggtcgttgatccagttcattggcggctggaaatggtac 230
Query: 1841 cccgtcctgagcagggggttgacgatggacggcggcacc 1879
|| ||||||||||||||| |||| ||||| | |||||||
Sbjct: 229 cctgtcctgagcagggggctgacaatggaggccggcacc 191
Score = 46.1 bits (23), Expect = 0.013
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1427 cggaactgcgtcacgttgatgccgccc 1453
|||||||||||| ||||||||||||||
Sbjct: 643 cggaactgcgtcgcgttgatgccgccc 617
>gb|CN127871.1|CN127871 RHOH1_25_C09.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_25_C09_A002 5', mRNA sequence
Length = 744
Score = 198 bits (100), Expect = 1e-048
Identities = 326/399 (81%), Gaps = 3/399 (0%)
Strand = Plus / Minus
Query: 1481 ggcttcacccactcccggagcagcgggtccgacacgttcttcgggtacgccacgttccgg 1540
|||||| |||||||||||||||||||||||||| ||||||| ||| | || | | |
Sbjct: 559 ggcttctcccactcccggagcagcgggtccgacgcgttcttggggaaggcgagcacctgc 500
Query: 1541 acctggtagttgatgtccgggtggtccacgcccgtgtacatgatcaccgggccgccgccg 1600
||||||||||||||||||||| ||| | || ||||| | |||| |||| || ||||
Sbjct: 499 acctggtagttgatgtccgggcggttgatcccagtgtagaggatcgccgg--cgt-gccg 443
Query: 1601 tcgggcagcaccgtcgccgacccggaccagcagccgtacctgtcgcccgggatgcttggt 1660
|| |||||| ||||||||| || ||||||||||||||| |||| |||||||| ||
Sbjct: 442 tcttgcagcatcgtcgccgagcccgaccagcagccgtactggtcggaggggatgctcggg 383
Query: 1661 ctgagcgccggctctagcgccacccagttgatgaggtctcgcgacaccgagtgcgcccac 1720
|| || ||||| ||||| | ||||||||||||||| || || | ||||| ||||||
Sbjct: 382 tagatggcgggctccagcgcgatccagttgatgaggtcgcgtgatatggagtgagcccac 323
Query: 1721 acgatgttgccccatacggcgcccttgggattgtattggtagaagaaatggtaccacccc 1780
| ||||||||||||||| ||||||||||| ||||| |||||||| | || ||||| |||
Sbjct: 322 atgatgttgccccatactgcgcccttggggttgtactggtagaacaggtgataccatccc 263
Query: 1781 ttgtagtacatgggcgcgttgggatcattgatccagttcttggggggctggaagtggtac 1840
||||||||||| || |||||||| || |||||||||||| | || |||||||| ||||||
Sbjct: 262 ttgtagtacatcggagcgttggggtcgttgatccagttcattggcggctggaaatggtac 203
Query: 1841 cccgtcctgagcagggggttgacgatggacggcggcacc 1879
|| ||||||||||||||| |||| ||||| | |||||||
Sbjct: 202 cctgtcctgagcagggggctgacaatggaggccggcacc 164
Score = 67.9 bits (34), Expect = 4e-009
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 1412 gccgtggtcgggtcgcggaactgcgtcacgttgatgccgccc 1453
||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 631 gccgtcgtcgggtcgcggaactgcgtcgcgttgatgccgccc 590
>gb|CW022072.1|CW022072 104_161_10431625_5_30007 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10431625, DNA
sequence
Length = 405
Score = 190 bits (96), Expect = 4e-046
Identities = 137/151 (90%), Gaps = 6/151 (3%)
Strand = Plus / Plus
Query: 501 acttggtagggtcggtgcacatgagcaccacgggcttgtcgc------cggcggcgggct 554
|||||||||||||||||||||||||||| ||| |||||| || ||||||||| ||
Sbjct: 254 acttggtagggtcggtgcacatgagcacgacgtgcttgttgctgctgccggcggcggcct 313
Query: 555 tgaacaccctgaagaacaccgcggttctctccttgcggttggcggaggccagcacccaca 614
||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 314 tgaacaccctgaagaacaccgcggtcctctccttgaggttggcggaggccagcacccaca 373
Query: 615 gcccgaacggccccacgccgcccctcacgtc 645
|||||||||| |||||||||||| |||||||
Sbjct: 374 gcccgaacggacccacgccgcccttcacgtc 404
>gb|CF071286.1|CF071286 FE1_16_A06.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_16_A06_A002 5', mRNA sequence
Length = 579
Score = 190 bits (96), Expect = 4e-046
Identities = 316/387 (81%), Gaps = 3/387 (0%)
Strand = Plus / Minus
Query: 1493 tcccggagcagcgggtccgacacgttcttcgggtacgccacgttccggacctggtagttg 1552
||||||||||||||||||||| ||||||| ||| | || | | | ||||||||||||
Sbjct: 579 tcccggagcagcgggtccgacgcgttcttggggaaggcgagcacctgcacctggtagttg 520
Query: 1553 atgtccgggtggtccacgcccgtgtacatgatcaccgggccgccgccgtcgggcagcacc 1612
||||||||| ||| | || ||||| | |||| |||| || |||||| |||||| |
Sbjct: 519 atgtccgggcggttgatcccagtgtagaggatcgccgg--cgt-gccgtcttgcagcatc 463
Query: 1613 gtcgccgacccggaccagcagccgtacctgtcgcccgggatgcttggtctgagcgccggc 1672
|||||||| || ||||||||||||||| |||| |||||||| || || || |||
Sbjct: 462 gtcgccgagcccgaccagcagccgtactggtcggaggggatgctcgggtagatggcgggc 403
Query: 1673 tctagcgccacccagttgatgaggtctcgcgacaccgagtgcgcccacacgatgttgccc 1732
|| ||||| | ||||||||||||||| || || | ||||| ||||||||||||||||||
Sbjct: 402 tccagcgcgatccagttgatgaggtcgcgtgatatggagtgagcccacacgatgttgccc 343
Query: 1733 catacggcgcccttgggattgtattggtagaagaaatggtaccaccccttgtagtacatg 1792
||||| ||||||||||| ||||| |||||||| | || ||||| ||||||||||||||
Sbjct: 342 catactgcgcccttggggttgtactggtagaacaggtgataccatcccttgtagtacatc 283
Query: 1793 ggcgcgttgggatcattgatccagttcttggggggctggaagtggtaccccgtcctgagc 1852
|| |||||||| || |||||||||||| | || |||||||| |||||||| |||||||||
Sbjct: 282 ggagcgttggggtcgttgatccagttcattggcggctggaaatggtaccctgtcctgagc 223
Query: 1853 agggggttgacgatggacggcggcacc 1879
|||||| |||| ||||| | |||||||
Sbjct: 222 agggggctgacaatggaggccggcacc 196
>gb|BG560224.1|BG560224 RHIZ2_71_F04.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 494
Score = 188 bits (95), Expect = 1e-045
Identities = 230/275 (83%)
Strand = Plus / Minus
Query: 1605 gcagcaccgtcgccgacccggaccagcagccgtacctgtcgcccgggatgcttggtctga 1664
|||||| ||||||||| || ||||||||||||||| |||| |||||||| || ||
Sbjct: 446 gcagcatcgtcgccgagcccgaccagcagccgtactggtcggaggggatgctcgggtaga 387
Query: 1665 gcgccggctctagcgccacccagttgatgaggtctcgcgacaccgagtgcgcccacacga 1724
|| ||||| ||||| | ||||||||||||||| || || | ||||| ||||||||||
Sbjct: 386 tggcgggctccagcgcgatccagttgatgaggtcgcgtgatatggagtgagcccacacga 327
Query: 1725 tgttgccccatacggcgcccttgggattgtattggtagaagaaatggtaccaccccttgt 1784
||||||||||||| ||||||||||| ||||| |||||||| | || ||||| |||||||
Sbjct: 326 tgttgccccatactgcgcccttggggttgtactggtagaacaggtgataccatcccttgt 267
Query: 1785 agtacatgggcgcgttgggatcattgatccagttcttggggggctggaagtggtaccccg 1844
||||||| || |||||||| || |||||||||||| | || |||||||| |||||||| |
Sbjct: 266 agtacatcggagcgttggggtcgttgatccagttcattggcggctggaaatggtaccctg 207
Query: 1845 tcctgagcagggggttgacgatggacggcggcacc 1879
|||||||||||||| |||| ||||| | |||||||
Sbjct: 206 tcctgagcagggggctgacaatggaggccggcacc 172
>gb|CD204377.1|CD204377 HS1_7_F03.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_7_F03_A012 5', mRNA sequence
Length = 602
Score = 188 bits (95), Expect = 1e-045
Identities = 315/386 (81%), Gaps = 3/386 (0%)
Strand = Plus / Minus
Query: 1494 cccggagcagcgggtccgacacgttcttcgggtacgccacgttccggacctggtagttga 1553
|||||||||||||||||||| ||||||| ||| | || | | | |||||||||||||
Sbjct: 602 cccggagcagcgggtccgacgcgttcttggggaaggcgagcacctgcacctggtagttga 543
Query: 1554 tgtccgggtggtccacgcccgtgtacatgatcaccgggccgccgccgtcgggcagcaccg 1613
|||||||| ||| | || ||||| | |||| |||| || |||||| |||||| ||
Sbjct: 542 tgtccgggcggttgatcccagtgtagaggatcgccgg--cg-tgccgtcttgcagcatcg 486
Query: 1614 tcgccgacccggaccagcagccgtacctgtcgcccgggatgcttggtctgagcgccggct 1673
||||||| || ||||||||||||||| |||| |||||||| || || || ||||
Sbjct: 485 tcgccgagcccgaccagcagccgtactggtcggaggggatgctcgggtagatggcgggct 426
Query: 1674 ctagcgccacccagttgatgaggtctcgcgacaccgagtgcgcccacacgatgttgcccc 1733
| ||||| | ||||||||||||||| || || | ||||| |||||||||||||||||||
Sbjct: 425 ccagcgcgatccagttgatgaggtcgcgtgatatggagtgagcccacacgatgttgcccc 366
Query: 1734 atacggcgcccttgggattgtattggtagaagaaatggtaccaccccttgtagtacatgg 1793
|||| ||||||||||| ||||| |||||||| | || ||||| |||||||||||||| |
Sbjct: 365 atactgcgcccttggggttgtactggtagaacaggtgataccatcccttgtagtacatcg 306
Query: 1794 gcgcgttgggatcattgatccagttcttggggggctggaagtggtaccccgtcctgagca 1853
| |||||||| || |||||||||||| | || |||||||| |||||||| ||||||||||
Sbjct: 305 gagcgttggggtcgttgatccagttcattggtggctggaaatggtaccctgtcctgagca 246
Query: 1854 gggggttgacgatggacggcggcacc 1879
||||| |||| ||||| | |||||||
Sbjct: 245 gggggctgacaatggaggccggcacc 220
>gb|CD222241.1|CD222241 CCC1_2_D02.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_2_D02_A007 5', mRNA sequence
Length = 534
Score = 188 bits (95), Expect = 1e-045
Identities = 230/275 (83%)
Strand = Plus / Minus
Query: 1605 gcagcaccgtcgccgacccggaccagcagccgtacctgtcgcccgggatgcttggtctga 1664
|||||| ||||||||| || ||||||||||||||| |||| |||||||| || ||
Sbjct: 444 gcagcatcgtcgccgagcccgaccagcagccgtactggtcggaggggatgctcgggtaga 385
Query: 1665 gcgccggctctagcgccacccagttgatgaggtctcgcgacaccgagtgcgcccacacga 1724
|| ||||| ||||| | ||||||||||||||| || || | ||||| ||||||||||
Sbjct: 384 tggcgggctccagcgcgatccagttgatgaggtcgcgtgatatggagtgagcccacacga 325
Query: 1725 tgttgccccatacggcgcccttgggattgtattggtagaagaaatggtaccaccccttgt 1784
||||||||||||| ||||||||||| ||||| |||||||| | || ||||| |||||||
Sbjct: 324 tgttgccccatactgcgcccttggggttgtactggtagaacaggtgataccatcccttgt 265
Query: 1785 agtacatgggcgcgttgggatcattgatccagttcttggggggctggaagtggtaccccg 1844
||||||| || |||||||| || |||||||||||| | || |||||||| |||||||| |
Sbjct: 264 agtacatcggagcgttggggtcgttgatccagttcattggtggctggaaatggtaccctg 205
Query: 1845 tcctgagcagggggttgacgatggacggcggcacc 1879
|||||||||||||| |||| ||||| | |||||||
Sbjct: 204 tcctgagcagggggctgacaatggaggccggcacc 170
>gb|CW073779.1|CW073779 104_339_10781480_114_31371_344 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10781480, DNA
sequence
Length = 699
Score = 184 bits (93), Expect = 2e-044
Identities = 156/177 (88%)
Strand = Plus / Plus
Query: 1612 cgtcgccgacccggaccagcagccgtacctgtcgcccgggatgcttggtctgagcgccgg 1671
||||||||| || ||||||||||||||| ||||| |||||||| || ||| ||||||
Sbjct: 18 cgtcgccgagcccgaccagcagccgtacttgtcggaggggatgctgggcttgatcgccgg 77
Query: 1672 ctctagcgccacccagttgatgaggtctcgcgacaccgagtgcgcccacacgatgttgcc 1731
||||| |||| ||||||||||||||| || || |||||||||||||| |||||||||||
Sbjct: 78 ctctaatgccatccagttgatgaggtcgcgtgagaccgagtgcgcccatacgatgttgcc 137
Query: 1732 ccatacggcgcccttgggattgtattggtagaagaaatggtaccaccccttgtagta 1788
|||||| ||||| ||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 138 ccatacagcgcctttggggttgtactggtagaagaaatggtaccaccccttgtagta 194
>gb|CX618822.1|CX618822 GABR1_41_H05.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_41_H05_A002 5', mRNA sequence
Length = 411
Score = 178 bits (90), Expect = 1e-042
Identities = 180/210 (85%)
Strand = Plus / Minus
Query: 1670 ggctctagcgccacccagttgatgaggtctcgcgacaccgagtgcgcccacacgatgttg 1729
||||| ||||| | ||||||||||||||| || || | ||||| |||||||||||||||
Sbjct: 392 ggctccagcgcgatccagttgatgaggtcgcgtgatatggagtgagcccacacgatgttg 333
Query: 1730 ccccatacggcgcccttgggattgtattggtagaagaaatggtaccaccccttgtagtac 1789
|||||||| ||||||||||| ||||| |||||||| | || ||||| ||||||||||||
Sbjct: 332 ccccatactgcgcccttggggttgtactggtagaacaggtgataccatcccttgtagtac 273
Query: 1790 atgggcgcgttgggatcattgatccagttcttggggggctggaagtggtaccccgtcctg 1849
|| || |||||||| || |||||||||||| | || |||||||| |||||||| ||||||
Sbjct: 272 atcggagcgttggggtcgttgatccagttcattggcggctggaaatggtaccctgtcctg 213
Query: 1850 agcagggggttgacgatggacggcggcacc 1879
||||||||| |||| ||||| | |||||||
Sbjct: 212 agcagggggctgacaatggaggccggcacc 183
>gb|CW023223.1|CW023223 104_163_10432326_1_30001 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10432326, DNA
sequence
Length = 253
Score = 165 bits (83), Expect = 2e-038
Identities = 110/119 (92%)
Strand = Plus / Plus
Query: 294 tcccgttgttgaacacgtagaggcgagcgtccttgccgatggccagcgacgggtagaccc 353
||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||
Sbjct: 1 tcccgttgttgaacacgtagaggcgggcgttcttgccgatggttttcgacgggtagaccc 60
Query: 354 tggagaggatgcaggtcttgcccccggctccgaagctctcaacgaccgaccggtcgatc 412
||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 61 tggagaggatgcacgtcttgcccccggctccaaagctctcaacaaccgaccggtcgatc 119
>gb|CL181797.1|CL181797 104_392_10896983_116_31926_359 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10896983, DNA
sequence
Length = 649
Score = 161 bits (81), Expect = 3e-037
Identities = 164/191 (85%), Gaps = 3/191 (1%)
Strand = Plus / Minus
Query: 509 gggtcggtgcacatgagcaccacgggcttgtcgccggcg---gcgggcttgaacaccctg 565
||||||||||||||||||||||| |||||| ||||| || |||||| |||||||||||
Sbjct: 468 gggtcggtgcacatgagcaccaccggcttgccgccgccgcgcgcgggcctgaacaccctg 409
Query: 566 aagaacaccgcggttctctccttgcggttggcggaggccagcacccacagcccgaacggc 625
|||||||| ||||| ||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 408 aagaacacggcggtcctctcctcccggttggcggaggccagcacccagagcccgaacggt 349
Query: 626 cccacgccgcccctcacgtccgcgcgcttcacgccgcacagcctctccgcgtcgtaggcc 685
|| ||||||||| |||| | |||| | | |||||||||||| || ||||||| |||
Sbjct: 348 ccgacgccgccctccacggcggcgcccctggcgccgcacagccgctgcgcgtcgccggcg 289
Query: 686 agcgccgggtc 696
|||||||||||
Sbjct: 288 agcgccgggtc 278
Score = 52.0 bits (26), Expect = 2e-004
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 734 tcgaagctcacctccacgtcagcctg 759
||||||||||||||||||||||||||
Sbjct: 243 tcgaagctcacctccacgtcagcctg 218
>gb|CW042642.1|CW042642 104_276_10507205_114_30482 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10507205, DNA
sequence
Length = 611
Score = 161 bits (81), Expect = 3e-037
Identities = 164/191 (85%), Gaps = 3/191 (1%)
Strand = Plus / Minus
Query: 509 gggtcggtgcacatgagcaccacgggcttgtcgccggcg---gcgggcttgaacaccctg 565
||||||||||||||||||||||| |||||| ||||| || |||||| |||||||||||
Sbjct: 495 gggtcggtgcacatgagcaccaccggcttgccgccgccgcgcgcgggcctgaacaccctg 436
Query: 566 aagaacaccgcggttctctccttgcggttggcggaggccagcacccacagcccgaacggc 625
|||||||| ||||| ||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 435 aagaacacggcggtcctctcctcccggttggcggaggccagcacccagagcccgaacggt 376
Query: 626 cccacgccgcccctcacgtccgcgcgcttcacgccgcacagcctctccgcgtcgtaggcc 685
|| ||||||||| |||| | |||| | | |||||||||||| || ||||||| |||
Sbjct: 375 ccgacgccgccctccacggcggcgcccctggcgccgcacagccgctgcgcgtcgccggcg 316
Query: 686 agcgccgggtc 696
|||||||||||
Sbjct: 315 agcgccgggtc 305
Score = 52.0 bits (26), Expect = 2e-004
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 734 tcgaagctcacctccacgtcagcctg 759
||||||||||||||||||||||||||
Sbjct: 270 tcgaagctcacctccacgtcagcctg 245
>gb|CW050897.1|CW050897 104_291_10514924_115_30196 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10514924, DNA
sequence
Length = 338
Score = 161 bits (81), Expect = 3e-037
Identities = 164/191 (85%), Gaps = 3/191 (1%)
Strand = Plus / Plus
Query: 509 gggtcggtgcacatgagcaccacgggcttgtcgccggcg---gcgggcttgaacaccctg 565
||||||||||||||||||||||| |||||| ||||| || |||||| |||||||||||
Sbjct: 111 gggtcggtgcacatgagcaccaccggcttgccgccgccgcgcgcgggcctgaacaccctg 170
Query: 566 aagaacaccgcggttctctccttgcggttggcggaggccagcacccacagcccgaacggc 625
|||||||| ||||| ||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 171 aagaacacggcggtcctctcctcccggttggcggaggccagcacccagagcccgaacggt 230
Query: 626 cccacgccgcccctcacgtccgcgcgcttcacgccgcacagcctctccgcgtcgtaggcc 685
|| ||||||||| |||| | |||| | | |||||||||||| || ||||||| |||
Sbjct: 231 ccgacgccgccctccacggcggcgcccctggcgccgcacagccgctgcgcgtcgccggcg 290
Query: 686 agcgccgggtc 696
|||||||||||
Sbjct: 291 agcgccgggtc 301
>gb|CW065109.1|CW065109 104_311_10522954_114_30122 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10522954, DNA
sequence
Length = 388
Score = 161 bits (81), Expect = 3e-037
Identities = 164/191 (85%), Gaps = 3/191 (1%)
Strand = Plus / Minus
Query: 509 gggtcggtgcacatgagcaccacgggcttgtcgccggcg---gcgggcttgaacaccctg 565
||||||||||||||||||||||| |||||| ||||| || |||||| |||||||||||
Sbjct: 283 gggtcggtgcacatgagcaccaccggcttgccgccgccgcgcgcgggcctgaacaccctg 224
Query: 566 aagaacaccgcggttctctccttgcggttggcggaggccagcacccacagcccgaacggc 625
|||||||| ||||| ||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 223 aagaacacggcggtcctctcctcccggttggcggaggccagcacccagagcccgaacggt 164
Query: 626 cccacgccgcccctcacgtccgcgcgcttcacgccgcacagcctctccgcgtcgtaggcc 685
|| ||||||||| |||| | |||| | | |||||||||||| || ||||||| |||
Sbjct: 163 ccgacgccgccctccacggcggcgcccctggcgccgcacagccgctgcgcgtcgccggcg 104
Query: 686 agcgccgggtc 696
|||||||||||
Sbjct: 103 agcgccgggtc 93
Score = 52.0 bits (26), Expect = 2e-004
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 734 tcgaagctcacctccacgtcagcctg 759
||||||||||||||||||||||||||
Sbjct: 58 tcgaagctcacctccacgtcagcctg 33
>gb|CW385193.1|CW385193 fsbb001f068j07f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f068j07, DNA
sequence
Length = 710
Score = 161 bits (81), Expect = 3e-037
Identities = 164/191 (85%), Gaps = 3/191 (1%)
Strand = Plus / Minus
Query: 509 gggtcggtgcacatgagcaccacgggcttgtcgccggcg---gcgggcttgaacaccctg 565
||||||||||||||||||||||| |||||| ||||| || |||||| |||||||||||
Sbjct: 473 gggtcggtgcacatgagcaccaccggcttgccgccgccgcgcgcgggcctgaacaccctg 414
Query: 566 aagaacaccgcggttctctccttgcggttggcggaggccagcacccacagcccgaacggc 625
|||||||| ||||| ||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 413 aagaacacggcggtcctctcctcccggttggcggaggccagcacccagagcccgaacggt 354
Query: 626 cccacgccgcccctcacgtccgcgcgcttcacgccgcacagcctctccgcgtcgtaggcc 685
|| ||||||||| |||| | |||| | | |||||||||||| || ||||||| |||
Sbjct: 353 ccgacgccgccctccacggcggcgcccctggcgccgcacagccgctgcgcgtcgccggcg 294
Query: 686 agcgccgggtc 696
|||||||||||
Sbjct: 293 agcgccgggtc 283
Score = 52.0 bits (26), Expect = 2e-004
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 734 tcgaagctcacctccacgtcagcctg 759
||||||||||||||||||||||||||
Sbjct: 248 tcgaagctcacctccacgtcagcctg 223
>gb|CW385194.1|CW385194 fsbb001f068j07k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f068j07, DNA
sequence
Length = 706
Score = 161 bits (81), Expect = 3e-037
Identities = 164/191 (85%), Gaps = 3/191 (1%)
Strand = Plus / Plus
Query: 509 gggtcggtgcacatgagcaccacgggcttgtcgccggcg---gcgggcttgaacaccctg 565
||||||||||||||||||||||| |||||| ||||| || |||||| |||||||||||
Sbjct: 492 gggtcggtgcacatgagcaccaccggcttgccgccgccgcgcgcgggcctgaacaccctg 551
Query: 566 aagaacaccgcggttctctccttgcggttggcggaggccagcacccacagcccgaacggc 625
|||||||| ||||| ||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 552 aagaacacggcggtcctctcctcccggttggcggaggccagcacccagagcccgaacggt 611
Query: 626 cccacgccgcccctcacgtccgcgcgcttcacgccgcacagcctctccgcgtcgtaggcc 685
|| ||||||||| |||| | |||| | | |||||||||||| || ||||||| |||
Sbjct: 612 ccgacgccgccctccacggcggcgcccctggcgccgcacagccgctgcgcgtcgccggcg 671
Query: 686 agcgccgggtc 696
|||||||||||
Sbjct: 672 agcgccgggtc 682
Score = 127 bits (64), Expect = 4e-027
Identities = 80/84 (95%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 329 ccgatggccagcgacgggtagaccctggagaggatgcaggtcttgcccccggctccgaag 388
|||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 10 ccgatggcgagcgacgggtagaccctggagaggatgcacgtcttgcccccggctcc-aag 68
Query: 389 ctctcaacgaccgaccggtcgatc 412
|||||||| |||||||||||||||
Sbjct: 69 ctctcaacaaccgaccggtcgatc 92
Score = 79.8 bits (40), Expect = 9e-013
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 412 caggcttctcagggatatcttgccgttcgagatgtccgtgtcgacaaatcctgcaaatgt 471
|||||||||||| || ||||||||||| || ||||| ||||| ||||| |||||||| ||
Sbjct: 202 caggcttctcagagagatcttgccgttagaaatgtctgtgtccacaaaacctgcaaacgt 261
Query: 472 cgggcggtacaggttcgggt 491
||| |||||||||||||||
Sbjct: 262 cggctggtacaggttcgggt 281
>gb|CW427480.1|CW427480 fsbb001f139i05k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f139i05, DNA
sequence
Length = 610
Score = 161 bits (81), Expect = 3e-037
Identities = 164/191 (85%), Gaps = 3/191 (1%)
Strand = Plus / Minus
Query: 509 gggtcggtgcacatgagcaccacgggcttgtcgccggcg---gcgggcttgaacaccctg 565
||||||||||||||||||||||| |||||| ||||| || |||||| |||||||||||
Sbjct: 339 gggtcggtgcacatgagcaccaccggcttgccgccgccgcgcgcgggcctgaacaccctg 280
Query: 566 aagaacaccgcggttctctccttgcggttggcggaggccagcacccacagcccgaacggc 625
|||||||| ||||| ||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 279 aagaacacggcggtcctctcctcccggttggcggaggccagcacccagagcccgaacggt 220
Query: 626 cccacgccgcccctcacgtccgcgcgcttcacgccgcacagcctctccgcgtcgtaggcc 685
|| ||||||||| |||| | |||| | | |||||||||||| || ||||||| |||
Sbjct: 219 ccgacgccgccctccacggcggcgcccctggcgccgcacagccgctgcgcgtcgccggcg 160
Query: 686 agcgccgggtc 696
|||||||||||
Sbjct: 159 agcgccgggtc 149
Score = 52.0 bits (26), Expect = 2e-004
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 734 tcgaagctcacctccacgtcagcctg 759
||||||||||||||||||||||||||
Sbjct: 114 tcgaagctcacctccacgtcagcctg 89
>gb|BE595814.1|BE595814 PI1_54_D08.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 474
Score = 155 bits (78), Expect = 2e-035
Identities = 186/222 (83%)
Strand = Plus / Minus
Query: 848 acctcctcgataggccactgcagcagctgcttcccactggggtccagccacaccgtcctt 907
||||||||||| ||||||||||||||||||||||| ||||| |||||||| | | |||||
Sbjct: 299 acctcctcgatgggccactgcagcagctgcttcccgctgggatccagccagatcttcctt 240
Query: 908 ggaatcgcctggattccagcccagcctttagccacatcgtcggcggcggtgtcggactcg 967
|| ||||| ||||| || ||||| || || ||| ||||||| | || |||||||||||
Sbjct: 239 gggatcgcatggatgccggcccatcccttggccttgtcgtcggggacgctgtcggactcg 180
Query: 968 ttagcccagccccacaggatgcggcgccgcttggccgggtcgtagaacgtcttggacgcg 1027
|||||||| || || | || |||||||| ||||| || ||||||||||||||||||
Sbjct: 179 ttagcccacccgaggagcacccgccgccgcttcgccggatcatagaacgtcttggacgcg 120
Query: 1028 tagaagttgccgtagtcgtagcgcaggcggtgctcgtcgccg 1069
|||||||||||||||||||| || || ||||| | |||||||
Sbjct: 119 tagaagttgccgtagtcgtaccggagccggtggtagtcgccg 78
Score = 44.1 bits (22), Expect = 0.051
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 734 tcgaagctcacctccacgtcagcctg 759
||||||||||||||||| ||||||||
Sbjct: 413 tcgaagctcacctccacatcagcctg 388
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 701,940
Number of Sequences: 832831
Number of extensions: 701940
Number of successful extensions: 209236
Number of sequences better than 0.5: 203
Number of HSP's better than 0.5 without gapping: 202
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 208567
Number of HSP's gapped (non-prelim): 646
length of query: 2055
length of database: 491,359,669
effective HSP length: 20
effective length of query: 2035
effective length of database: 474,703,049
effective search space: 966020704715
effective search space used: 966020704715
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)