BLASTN 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2486118.2.1
         (635 letters)

Database: Sorghum_nucl_with_EST.fasta 
           832,831 sequences; 491,359,669 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AW285511.1|AW285511  LG1_241_E06.g1_A002 Light Grown 1 (L...   513   e-144
gb|BE363123.1|BE363123  DG1_9_B09.g1_A002 Dark Grown 1 (DG1)...   513   e-144
gb|BG103495.1|BG103495  RHIZ2_37_C06.g1_A003 Rhizome2 (RHIZ2...   402   e-110
gb|CF071040.1|CF071040  FE1_15_B03.b1_A002 Iron-deficient se...   307   7e-082
gb|CW026623.1|CW026623  104_252_10498051_116_30520 Sorghum m...   168   4e-040
gb|CW039030.1|CW039030  104_271_10505258_114_30387 Sorghum m...   163   2e-038
gb|CL190999.1|CL190999  104_409_10906474_116_32497_037 Sorgh...   155   6e-036
gb|CW411521.1|CW411521  fsbb001f106l17k0 Sorghum methylation...   155   6e-036
gb|CW464011.1|CW464011  fsbb001f213a09f0 Sorghum methylation...   155   6e-036
gb|BZ332309.1|BZ332309  hx26h05.b1 WGS-SbicolorF (JM107 adap...   147   1e-033
gb|CW056868.1|CW056868  104_298_10517912_115_30157 Sorghum m...   143   2e-032
gb|AW283377.1|AW283377  LG1_223_D12.g1_A002 Light Grown 1 (L...    50   3e-004
gb|AW565409.1|AW565409  LG1_343_G07.g1_A002 Light Grown 1 (L...    50   3e-004
gb|BG947765.1|BG947765  IP1_8_G12.g1_A002 Immature pannicle ...    50   3e-004
gb|BG948058.1|BG948058  IP1_8_G12.b1_A002 Immature pannicle ...    50   3e-004
gb|BI074550.1|BI074550  IP1_16_A11.g1_A002 Immature pannicle...    50   3e-004
gb|CW235147.1|CW235147  104_690_11214827_148_37411_042 Sorgh...    48   0.001
gb|CW025732.1|CW025732  104_227_10488364_114_30506 Sorghum m...    44   0.015
gb|CW411352.1|CW411352  fsbb001f106h21f0 Sorghum methylation...    44   0.015
gb|CF072959.1|CF072959  FE1_27_D01.b1_A002 Iron-deficient se...    42   0.061
gb|CX608205.1|CX608205  ANR1_37_F12.b1_A002 Anaerobic roots ...    42   0.061
>gb|AW285511.1|AW285511 LG1_241_E06.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
           sequence
          Length = 620

 Score =  513 bits (259), Expect = e-144
 Identities = 333/358 (93%)
 Strand = Plus / Plus

                                                                       
Query: 5   ggcgacgacgtggacgacgagttcncggacctgtacatcgtcaagtggacgtcgctgatg 64
           |||||||||||||||||||||||  | ||||||||||||||||||||||| |||||||||
Sbjct: 71  ggcgacgacgtggacgacgagtttgcagacctgtacatcgtcaagtggacatcgctgatg 130

                                                                       
Query: 65  atcccgcccatcgtgatcatgatggtgaacctgatcggcatcgcggtcgggttcagccgc 124
           ||||||||||||||||||||||||||||||||||||||||| || || || |||||||||
Sbjct: 131 atcccgcccatcgtgatcatgatggtgaacctgatcggcattgccgtgggcttcagccgc 190

                                                                       
Query: 125 accatctacagcgagatcccgcagtggagcaagctgctgggcggcgtcttcttcagcttc 184
           ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 191 accatctacagcgagatcccgcagtggagcaagctgctgggtggtgtcttcttcagcttc 250

                                                                       
Query: 185 tgggtgctggcgcacctgtacccgttcgccaagggcctgatggggcggaggggccgcacg 244
           |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 251 tgggtgctggcgcacctgtacccgttcgccaagggcctgatggggcggagagggcgcacg 310

                                                                       
Query: 245 ccgaccatcgtcttcgtctgggcgggcctcctctccatcaccatctcgctgctgtgggtg 304
           || |||||||||||||||||||| || |||||||||||||||||||| ||||||||||| 
Sbjct: 311 cccaccatcgtcttcgtctgggcaggactcctctccatcaccatctccctgctgtgggtc 370

                                                                     
Query: 305 gccatcaacccgccgtcccagaaccagcagattggtgggtcgttcacattcccgtgaa 362
           |||||||||||||| ||   |||||||||||||||||| || ||||| ||||| ||||
Sbjct: 371 gccatcaacccgccatctgggaaccagcagattggtggatccttcaccttcccctgaa 428

 Score = 42.1 bits (21), Expect = 0.061
 Identities = 38/43 (88%), Gaps = 3/43 (6%)
 Strand = Plus / Plus

                                                      
Query: 533 atactcttatgatgagctatagtagtagttcttttgttctttt 575
           ||||| ||||||||||||| ||||   ||||||||||||||||
Sbjct: 581 atactgttatgatgagctaaagta---gttcttttgttctttt 620
>gb|BE363123.1|BE363123 DG1_9_B09.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
           sequence
          Length = 560

 Score =  513 bits (259), Expect = e-144
 Identities = 333/358 (93%)
 Strand = Plus / Plus

                                                                       
Query: 5   ggcgacgacgtggacgacgagttcncggacctgtacatcgtcaagtggacgtcgctgatg 64
           |||||||||||||||||||||||  | ||||||||||||||||||||||| |||||||||
Sbjct: 30  ggcgacgacgtggacgacgagtttgcagacctgtacatcgtcaagtggacatcgctgatg 89

                                                                       
Query: 65  atcccgcccatcgtgatcatgatggtgaacctgatcggcatcgcggtcgggttcagccgc 124
           ||||||||||||||||||||||||||||||||||||||||| || || || |||||||||
Sbjct: 90  atcccgcccatcgtgatcatgatggtgaacctgatcggcattgccgtgggcttcagccgc 149

                                                                       
Query: 125 accatctacagcgagatcccgcagtggagcaagctgctgggcggcgtcttcttcagcttc 184
           ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 150 accatctacagcgagatcccgcagtggagcaagctgctgggtggtgtcttcttcagcttc 209

                                                                       
Query: 185 tgggtgctggcgcacctgtacccgttcgccaagggcctgatggggcggaggggccgcacg 244
           |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 210 tgggtgctggcgcacctgtacccgttcgccaagggcctgatggggcggagagggcgcacg 269

                                                                       
Query: 245 ccgaccatcgtcttcgtctgggcgggcctcctctccatcaccatctcgctgctgtgggtg 304
           || |||||||||||||||||||| || |||||||||||||||||||| ||||||||||| 
Sbjct: 270 cccaccatcgtcttcgtctgggcaggactcctctccatcaccatctccctgctgtgggtc 329

                                                                     
Query: 305 gccatcaacccgccgtcccagaaccagcagattggtgggtcgttcacattcccgtgaa 362
           |||||||||||||| ||   |||||||||||||||||| || ||||| ||||| ||||
Sbjct: 330 gccatcaacccgccatctgggaaccagcagattggtggatccttcaccttcccctgaa 387
>gb|BG103495.1|BG103495 RHIZ2_37_C06.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
           sequence
          Length = 380

 Score =  402 bits (203), Expect = e-110
 Identities = 269/291 (92%)
 Strand = Plus / Plus

                                                                       
Query: 72  ccatcgtgatcatgatggtgaacctgatcggcatcgcggtcgggttcagccgcaccatct 131
           |||| ||||||||||||||||||||||||||||| || || || ||||||||||||||||
Sbjct: 1   ccattgtgatcatgatggtgaacctgatcggcattgccgtgggcttcagccgcaccatct 60

                                                                       
Query: 132 acagcgagatcccgcagtggagcaagctgctgggcggcgtcttcttcagcttctgggtgc 191
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 61  acagcgagatcccgcagtggagcaagctgctgggcggtgtcttcttcagcttctgggtgc 120

                                                                       
Query: 192 tggcgcacctgtacccgttcgccaagggcctgatggggcggaggggccgcacgccgacca 251
           |||||||||||||||| |||||||||||||||||||||||||| || |||||||| ||||
Sbjct: 121 tggcgcacctgtacccattcgccaagggcctgatggggcggagagggcgcacgcccacca 180

                                                                       
Query: 252 tcgtcttcgtctgggcgggcctcctctccatcaccatctcgctgctgtgggtggccatca 311
           |||||||||||||||| || |||||||||||||||||||| ||||||||||| |||||||
Sbjct: 181 tcgtcttcgtctgggcaggactcctctccatcaccatctccctgctgtgggtcgccatca 240

                                                              
Query: 312 acccgccgtcccagaaccagcagattggtgggtcgttcacattcccgtgaa 362
           ||||||| ||   |||||||||||||||||| || ||||| ||||| ||||
Sbjct: 241 acccgccatctgggaaccagcagattggtggatccttcaccttcccctgaa 291
>gb|CF071040.1|CF071040 FE1_15_B03.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
           clone FE1_15_B03_A002 3', mRNA sequence
          Length = 505

 Score =  307 bits (155), Expect = 7e-082
 Identities = 197/211 (93%)
 Strand = Plus / Plus

                                                                       
Query: 132 acagcgagatcccgcagtggagcaagctgctgggcggcgtcttcttcagcttctgggtgc 191
           |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 1   acagcgagatcccgcagtggagcaagctgctgggtggtgtcttcttcagcttctgggtgc 60

                                                                       
Query: 192 tggcgcacctgtacccgttcgccaagggcctgatggggcggaggggccgcacgccgacca 251
           ||||||||||||||||||||||||||| ||||||||||||||| || |||||||| ||||
Sbjct: 61  tggcgcacctgtacccgttcgccaaggccctgatggggcggagagggcgcacgcccacca 120

                                                                       
Query: 252 tcgtcttcgtctgggcgggcctcctctccatcaccatctcgctgctgtgggtggccatca 311
           |||||||||||||||| || |||||||||||||||||||| ||||||||||| |||||||
Sbjct: 121 tcgtcttcgtctgggcaggactcctctccatcaccatctccctgctgtgggtcgccatca 180

                                          
Query: 312 acccgccgtcccagaaccagcagattggtgg 342
           ||||||| ||   ||||||||||||||||||
Sbjct: 181 acccgccatctgggaaccagcagattggtgg 211

 Score = 48.1 bits (24), Expect = 0.001
 Identities = 44/50 (88%), Gaps = 3/50 (6%)
 Strand = Plus / Plus

                                                             
Query: 533 atactcttatgatgagctatagtagtagttcttttgttcttttgtttttg 582
           ||||| ||||||||||||| |||||   ||||||||||||||| ||||||
Sbjct: 384 atactgttatgatgagctaaagtag---ttcttttgttcttttatttttg 430
>gb|CW026623.1|CW026623 104_252_10498051_116_30520 Sorghum methylation filtered library
           (LibID: 104) Sorghum bicolor genomic clone 10498051, DNA
           sequence
          Length = 650

 Score =  168 bits (85), Expect = 4e-040
 Identities = 151/173 (87%)
 Strand = Plus / Plus

                                                                       
Query: 131 tacagcgagatcccgcagtggagcaagctgctgggcggcgtcttcttcagcttctgggtg 190
           ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 62  tacagcgagttcccgcagtggagcaagctgctgggcggcgccttcttcagcttctgggtg 121

                                                                       
Query: 191 ctggcgcacctgtacccgttcgccaagggcctgatggggcggaggggccgcacgccgacc 250
           |||   ||||| ||||||||||||||||| ||  |||| ||  | |||||   |||||||
Sbjct: 122 ctgtgccacctctacccgttcgccaagggactcctgggccgccgcggccgtgtgccgacc 181

                                                                
Query: 251 atcgtcttcgtctgggcgggcctcctctccatcaccatctcgctgctgtgggt 303
           ||||| ||||||||| |||| ||| ||||||| |||||||||||||| |||||
Sbjct: 182 atcgtgttcgtctggtcggggctcatctccatgaccatctcgctgctctgggt 234
>gb|CW039030.1|CW039030 104_271_10505258_114_30387 Sorghum methylation filtered library
           (LibID: 104) Sorghum bicolor genomic clone 10505258, DNA
           sequence
          Length = 675

 Score =  163 bits (82), Expect = 2e-038
 Identities = 157/182 (86%)
 Strand = Plus / Plus

                                                                       
Query: 137 gagatcccgcagtggagcaagctgctgggcggcgtcttcttcagcttctgggtgctggcg 196
           |||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 305 gagatcccgcagtacagcaagctgctgggcggcggcttcttcagcttctgggtgctggcg 364

                                                                       
Query: 197 cacctgtacccgttcgccaagggcctgatggggcggaggggccgcacgccgaccatcgtc 256
           |||   ||||||||||||||||| || ||||| ||  | || ||||| |||||| |||||
Sbjct: 365 cactactacccgttcgccaaggggctcatgggccgccgcggacgcacaccgaccctcgtc 424

                                                                       
Query: 257 ttcgtctgggcgggcctcctctccatcaccatctcgctgctgtgggtggccatcaacccg 316
           | |||||||||||| ||| ||||||||||| |||| ||||| ||| |  |||||| ||||
Sbjct: 425 tacgtctgggcggggctcatctccatcaccgtctccctgctctggatcaccatcagcccg 484

             
Query: 317 cc 318
           ||
Sbjct: 485 cc 486

 Score = 40.1 bits (20), Expect = 0.24
 Identities = 31/35 (88%)
 Strand = Plus / Plus

                                              
Query: 26  ttcncggacctgtacatcgtcaagtggacgtcgct 60
           ||| |||| |||||| |||| ||||||||||||||
Sbjct: 194 ttcgcggagctgtacctcgtgaagtggacgtcgct 228
>gb|CL190999.1|CL190999 104_409_10906474_116_32497_037 Sorghum methylation-filtered library
           (LibID: 104) Sorghum bicolor genomic clone 10906474, DNA
           sequence
          Length = 770

 Score =  155 bits (78), Expect = 6e-036
 Identities = 168/198 (84%)
 Strand = Plus / Minus

                                                                       
Query: 122 cgcaccatctacagcgagatcccgcagtggagcaagctgctgggcggcgtcttcttcagc 181
           |||||| |||||||||| | |||||  ||| ||||| |  | ||||||| ||||||||||
Sbjct: 502 cgcaccgtctacagcgacaacccgcgctggggcaagttcatcggcggcggcttcttcagc 443

                                                                       
Query: 182 ttctgggtgctggcgcacctgtacccgttcgccaagggcctgatggggcggaggggccgc 241
           |||||||||||||||||||| ||||| |||||||||||||| ||||| ||  | |||   
Sbjct: 442 ttctgggtgctggcgcacctctaccccttcgccaagggcctcatgggccgccgcggcaag 383

                                                                       
Query: 242 acgccgaccatcgtcttcgtctgggcgggcctcctctccatcaccatctcgctgctgtgg 301
           ||||| |||||||||||||| ||| |||| ||| |||||||||||||||| ||||| |||
Sbjct: 382 acgcccaccatcgtcttcgtttggtcgggactcatctccatcaccatctccctgctctgg 323

                             
Query: 302 gtggccatcaacccgccg 319
           || ||||||| |||||||
Sbjct: 322 gttgccatcagcccgccg 305
>gb|CW411521.1|CW411521 fsbb001f106l17k0 Sorghum methylation filtered library (LibID: 104)
           Sorghum bicolor genomic clone fsbb001f106l17, DNA
           sequence
          Length = 677

 Score =  155 bits (78), Expect = 6e-036
 Identities = 168/198 (84%)
 Strand = Plus / Minus

                                                                       
Query: 122 cgcaccatctacagcgagatcccgcagtggagcaagctgctgggcggcgtcttcttcagc 181
           |||||| |||||||||| | |||||  ||| ||||| |  | ||||||| ||||||||||
Sbjct: 321 cgcaccgtctacagcgacaacccgcgctggggcaagttcatcggcggcggcttcttcagc 262

                                                                       
Query: 182 ttctgggtgctggcgcacctgtacccgttcgccaagggcctgatggggcggaggggccgc 241
           |||||||||||||||||||| ||||| |||||||||||||| ||||| ||  | |||   
Sbjct: 261 ttctgggtgctggcgcacctctaccccttcgccaagggcctcatgggccgccgcggcaag 202

                                                                       
Query: 242 acgccgaccatcgtcttcgtctgggcgggcctcctctccatcaccatctcgctgctgtgg 301
           ||||| |||||||||||||| ||| |||| ||| |||||||||||||||| ||||| |||
Sbjct: 201 acgcccaccatcgtcttcgtttggtcgggactcatctccatcaccatctccctgctctgg 142

                             
Query: 302 gtggccatcaacccgccg 319
           || ||||||| |||||||
Sbjct: 141 gttgccatcagcccgccg 124
>gb|CW464011.1|CW464011 fsbb001f213a09f0 Sorghum methylation filtered library (LibID: 104)
           Sorghum bicolor genomic clone fsbb001f213a09, DNA
           sequence
          Length = 634

 Score =  155 bits (78), Expect = 6e-036
 Identities = 168/198 (84%)
 Strand = Plus / Minus

                                                                       
Query: 122 cgcaccatctacagcgagatcccgcagtggagcaagctgctgggcggcgtcttcttcagc 181
           |||||| |||||||||| | |||||  ||| ||||| |  | ||||||| ||||||||||
Sbjct: 543 cgcaccgtctacagcgacaacccgcgctggggcaagttcatcggcggcggcttcttcagc 484

                                                                       
Query: 182 ttctgggtgctggcgcacctgtacccgttcgccaagggcctgatggggcggaggggccgc 241
           |||||||||||||||||||| ||||| |||||||||||||| ||||| ||  | |||   
Sbjct: 483 ttctgggtgctggcgcacctctaccccttcgccaagggcctcatgggccgccgcggcaag 424

                                                                       
Query: 242 acgccgaccatcgtcttcgtctgggcgggcctcctctccatcaccatctcgctgctgtgg 301
           ||||| |||||||||||||| ||| |||| ||| |||||||||||||||| ||||| |||
Sbjct: 423 acgcccaccatcgtcttcgtttggtcgggactcatctccatcaccatctccctgctctgg 364

                             
Query: 302 gtggccatcaacccgccg 319
           || ||||||| |||||||
Sbjct: 363 gttgccatcagcccgccg 346
>gb|BZ332309.1|BZ332309 hx26h05.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
           bicolor genomic clone hx26h05 5', DNA sequence
          Length = 649

 Score =  147 bits (74), Expect = 1e-033
 Identities = 150/174 (86%), Gaps = 1/174 (0%)
 Strand = Plus / Minus

                                                                       
Query: 131 tacagcgagatcccgcagtggagcaagctgctgggcggcgtcttcttcagcttctgggtg 190
           ||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 628 tacagcgagttcccgcagtggagcaagctgctgggcggcgccttcttcagcttttgggtg 569

                                                                       
Query: 191 ctggcgcacctgtacccg-ttcgccaagggcctgatggggcggaggggccgcacgccgac 249
           |||   ||||| |||||| ||||||||||| ||  |||| ||  | |||||   ||||||
Sbjct: 568 ctgtgccacctctacccgtttcgccaagggactcctgggccgccgcggccgtgtgccgac 509

                                                                 
Query: 250 catcgtcttcgtctgggcgggcctcctctccatcaccatctcgctgctgtgggt 303
           |||||| ||||||||| |||| ||| ||||||| |||||||||||||| |||||
Sbjct: 508 catcgtgttcgtctggtcggggctcatctccatgaccatctcgctgctctgggt 455
>gb|CW056868.1|CW056868 104_298_10517912_115_30157 Sorghum methylation filtered library
           (LibID: 104) Sorghum bicolor genomic clone 10517912, DNA
           sequence
          Length = 446

 Score =  143 bits (72), Expect = 2e-032
 Identities = 129/148 (87%)
 Strand = Plus / Plus

                                                                       
Query: 172 cttcttcagcttctgggtgctggcgcacctgtacccgttcgccaagggcctgatggggcg 231
           |||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||| ||
Sbjct: 3   cttcttcagcttctgggtgctggcgcacctctaccccttcgccaagggcctcatgggccg 62

                                                                       
Query: 232 gaggggccgcacgccgaccatcgtcttcgtctgggcgggcctcctctccatcaccatctc 291
             | |||   ||||| |||||||||||||| ||| |||| ||| ||||||||||||||||
Sbjct: 63  ccgcggcaagacgcccaccatcgtcttcgtttggtcgggactcatctccatcaccatctc 122

                                       
Query: 292 gctgctgtgggtggccatcaacccgccg 319
            ||||| ||||| ||||||| |||||||
Sbjct: 123 cctgctctgggttgccatcagcccgccg 150
>gb|AW283377.1|AW283377 LG1_223_D12.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
           sequence
          Length = 574

 Score = 50.1 bits (25), Expect = 3e-004
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 197 cacctgtacccgttcgccaagggcctgatgggg 229
           |||||||||||||||  ||||||||||||||||
Sbjct: 180 cacctgtacccgttcctcaagggcctgatgggg 212
>gb|AW565409.1|AW565409 LG1_343_G07.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
           sequence
          Length = 646

 Score = 50.1 bits (25), Expect = 3e-004
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 182 ttctgggtgctggcgcacctgtacccgttcgccaagggcct 222
           ||||||||||||   ||||| ||||||||||||||||||||
Sbjct: 1   ttctgggtgctgttccacctctacccgttcgccaagggcct 41
>gb|BG947765.1|BG947765 IP1_8_G12.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
           mRNA sequence
          Length = 597

 Score = 50.1 bits (25), Expect = 3e-004
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 197 cacctgtacccgttcgccaagggcctgatgggg 229
           |||||||||||||||  ||||||||||||||||
Sbjct: 195 cacctgtacccgttcctcaagggcctgatgggg 227
>gb|BG948058.1|BG948058 IP1_8_G12.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
           mRNA sequence
          Length = 597

 Score = 50.1 bits (25), Expect = 3e-004
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 197 cacctgtacccgttcgccaagggcctgatgggg 229
           |||||||||||||||  ||||||||||||||||
Sbjct: 473 cacctgtacccgttcctcaagggcctgatgggg 505
>gb|BI074550.1|BI074550 IP1_16_A11.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
           mRNA sequence
          Length = 599

 Score = 50.1 bits (25), Expect = 3e-004
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 197 cacctgtacccgttcgccaagggcctgatgggg 229
           |||||||||||||||  ||||||||||||||||
Sbjct: 197 cacctgtacccgttcctcaagggcctgatgggg 229
>gb|CW235147.1|CW235147 104_690_11214827_148_37411_042 Sorghum methylation filtered library
           (LibID: 104) Sorghum bicolor genomic clone 11214827, DNA
           sequence
          Length = 651

 Score = 48.1 bits (24), Expect = 0.001
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 149 tggagcaagctgctgggcggcgtcttcttcagcttctgggtgct 192
           |||||||||||||| || || || || |||||||||||||||||
Sbjct: 55  tggagcaagctgcttgggggagtgtttttcagcttctgggtgct 12
>gb|CW025732.1|CW025732 104_227_10488364_114_30506 Sorghum methylation filtered library
           (LibID: 104) Sorghum bicolor genomic clone 10488364, DNA
           sequence
          Length = 759

 Score = 44.1 bits (22), Expect = 0.015
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 561 ttcttttgttcttttgtttttg 582
           ||||||||||||||||||||||
Sbjct: 81  ttcttttgttcttttgtttttg 60
>gb|CW411352.1|CW411352 fsbb001f106h21f0 Sorghum methylation filtered library (LibID: 104)
           Sorghum bicolor genomic clone fsbb001f106h21, DNA
           sequence
          Length = 750

 Score = 44.1 bits (22), Expect = 0.015
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 561 ttcttttgttcttttgtttttg 582
           ||||||||||||||||||||||
Sbjct: 575 ttcttttgttcttttgtttttg 554
>gb|CF072959.1|CF072959 FE1_27_D01.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
           clone FE1_27_D01_A002 3', mRNA sequence
          Length = 574

 Score = 42.1 bits (21), Expect = 0.061
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 197 cacctgtacccgttcgccaagggcctgatgggg 229
           |||||||||||||||  ||||| ||||||||||
Sbjct: 191 cacctgtacccgttcctcaaggccctgatgggg 223
>gb|CX608205.1|CX608205 ANR1_37_F12.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
           ANR1_37_F12_A002 3', mRNA sequence
          Length = 528

 Score = 42.1 bits (21), Expect = 0.061
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 197 cacctgtacccgttcgccaagggcctgatgggg 229
           |||||||||||||||  ||||| ||||||||||
Sbjct: 121 cacctgtacccgttcctcaaggccctgatgggg 153
  Database: Sorghum_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:54 PM
  Number of letters in database: 491,359,669
  Number of sequences in database:  832,831
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 213,261
Number of Sequences: 832831
Number of extensions: 213261
Number of successful extensions: 61745
Number of sequences better than  0.5: 21
Number of HSP's better than  0.5 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61697
Number of HSP's gapped (non-prelim): 42
length of query: 635
length of database: 491,359,669
effective HSP length: 19
effective length of query: 616
effective length of database: 475,535,880
effective search space: 292930102080
effective search space used: 292930102080
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)