BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2485885.2.1
(1063 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW462705.1|CW462705 fsbb001f210p13k0 Sorghum methylation... 870 0.0
gb|CW462704.1|CW462704 fsbb001f210p13f0 Sorghum methylation... 446 e-123
gb|CW468073.1|CW468073 fsbb001f220a14k0 Sorghum methylation... 295 4e-078
gb|CW388737.1|CW388737 fsbb001f073k02k0 Sorghum methylation... 293 2e-077
gb|CW057284.1|CW057284 104_299_10518136_115_30171 Sorghum m... 232 5e-059
gb|CW069511.1|CW069511 104_319_10525937_1_30093 Sorghum met... 232 5e-059
gb|CW334933.1|CW334933 104_833_11482765_148_36071_053 Sorgh... 232 5e-059
gb|CW439239.1|CW439239 fsbb001f157e12k0 Sorghum methylation... 232 5e-059
gb|CW412501.1|CW412501 fsbb001f108c15f0 Sorghum methylation... 228 8e-058
gb|CW106991.1|CW106991 104_476_11096301_116_34468_081 Sorgh... 220 2e-055
gb|CW223772.1|CW223772 104_659_11203093_148_37190_051 Sorgh... 216 3e-054
gb|CW326640.1|CW326640 104_822_11478325_148_35966_063 Sorgh... 190 2e-046
gb|CW338052.1|CW338052 104_838_11484537_148_36123_043 Sorgh... 190 2e-046
gb|CW084531.1|CW084531 104_427_10945849_116_32511_009 Sorgh... 186 3e-045
gb|CW387989.1|CW387989 fsbb001f072j01k0 Sorghum methylation... 178 7e-043
gb|CW387988.1|CW387988 fsbb001f072j01f0 Sorghum methylation... 155 1e-035
gb|CD233295.1|CD233295 SS1_13_C04.b1_A012 Salt-stressed see... 137 2e-030
gb|CF427347.1|CF427347 PH1_1_C12.b1_A002 Phosphorous-defici... 137 2e-030
gb|CN145147.1|CN145147 WOUND1_27_C09.b2_A002 Wounded leaves... 137 2e-030
gb|CX619395.1|CX619395 GABR1_45_E08.b1_A002 GA- or brassino... 137 2e-030
gb|CW183911.1|CW183911 104_600_11164869_116_36681_095 Sorgh... 129 6e-028
gb|CF426997.1|CF426997 PH1_3_C05.b1_A002 Phosphorous-defici... 129 6e-028
gb|CN149641.1|CN149641 WOUND1_64_B10.b1_A002 Wounded leaves... 129 6e-028
gb|CN150564.1|CN150564 WOUND1_70_B11.b1_A002 Wounded leaves... 129 6e-028
gb|CW311619.1|CW311619 104_801_11470327_148_36278_028 Sorgh... 127 2e-027
gb|CW326639.1|CW326639 104_822_11478325_116_35967_063 Sorgh... 127 2e-027
gb|CW106992.1|CW106992 104_476_11096301_148_34464_081 Sorgh... 123 4e-026
gb|CW312716.1|CW312716 104_802_11470908_148_35777_036 Sorgh... 123 4e-026
gb|CL159037.1|CL159037 104_348_10803969_116_31380_177 Sorgh... 119 6e-025
gb|CL187943.1|CL187943 104_404_10901247_114_32442_064 Sorgh... 119 6e-025
gb|CL187944.1|CL187944 104_404_10901247_116_32446_064 Sorgh... 119 6e-025
gb|CW089827.1|CW089827 104_435_10948933_116_32594_057 Sorgh... 119 6e-025
gb|CW171881.1|CW171881 104_582_11155977_148_36526_033 Sorgh... 119 6e-025
gb|CW255117.1|CW255117 104_719_11226054_116_35123_021 Sorgh... 117 2e-024
gb|CF433267.1|CF433267 NIT1_26_H04.b1_A002 Nitrogen-deficie... 111 1e-022
gb|CX623211.1|CX623211 GABR1_68_H03.b1_A002 GA- or brassino... 111 1e-022
gb|CW338051.1|CW338051 104_838_11484537_116_36122_043 Sorgh... 109 5e-022
gb|CL154940.1|CL154940 104_340_10781755_116_31470_235 Sorgh... 98 2e-018
gb|BZ348795.1|BZ348795 hp61d04.g2 WGS-SbicolorF (JM107 adap... 90 5e-016
gb|CW032833.1|CW032833 104_262_10501615_115_30362 Sorghum m... 90 5e-016
gb|CW093428.1|CW093428 104_456_10999770_148_37471_071 Sorgh... 90 5e-016
gb|CW388736.1|CW388736 fsbb001f073k02f0 Sorghum methylation... 84 3e-014
gb|CW491158.1|CW491158 fsbb001f280o13k0 Sorghum methylation... 82 1e-013
gb|CW176402.1|CW176402 104_589_11158468_148_36680_010 Sorgh... 80 5e-013
gb|CW491157.1|CW491157 fsbb001f280o13f0 Sorghum methylation... 78 2e-012
gb|BE355206.1|BE355206 DG1_10_G03.g1_A002 Dark Grown 1 (DG1... 70 5e-010
gb|BE593270.1|BE593270 WS1_99_F12.g1_A002 Water-stressed 1 ... 70 5e-010
gb|CB925243.1|CB925243 ABA1_32_F05.b1_A012 Abscisic acid-tr... 70 5e-010
gb|CF429042.1|CF429042 PH1_19_F01.b1_A002 Phosphorous-defic... 70 5e-010
gb|CN142613.1|CN142613 WOUND1_11_C11.b1_A002 Wounded leaves... 70 5e-010
gb|CW024022.1|CW024022 104_164_10434714_1_30002 Sorghum met... 68 2e-009
gb|CN141745.1|CN141745 WOUND1_1_C12.g1_A002 Wounded leaves ... 68 2e-009
gb|CN144845.1|CN144845 WOUND1_25_G01.b2_A002 Wounded leaves... 68 2e-009
gb|CW312715.1|CW312715 104_802_11470908_116_35781_036 Sorgh... 66 7e-009
gb|CL147634.1|CL147634 104_327_10592526_116_31781_034 Sorgh... 64 3e-008
gb|CW412502.1|CW412502 fsbb001f108c15k0 Sorghum methylation... 64 3e-008
gb|CW142907.1|CW142907 104_534_11137119_116_34948_056 Sorgh... 60 4e-007
gb|CW142908.1|CW142908 104_534_11137119_148_34944_056 Sorgh... 60 4e-007
gb|CW233503.1|CW233503 104_686_11213464_116_37376_052 Sorgh... 60 4e-007
gb|CW233504.1|CW233504 104_686_11213464_148_37375_052 Sorgh... 60 4e-007
gb|CW236611.1|CW236611 104_692_11215707_148_37500_006 Sorgh... 60 4e-007
gb|CW261570.1|CW261570 104_728_11229584_148_35173_020 Sorgh... 60 4e-007
gb|CW264925.1|CW264925 104_734_11231579_116_35257_048 Sorgh... 60 4e-007
gb|CW264926.1|CW264926 104_734_11231579_148_35261_048 Sorgh... 60 4e-007
gb|CW277522.1|CW277522 104_751_11406073_148_35415_005 Sorgh... 60 4e-007
gb|CW467620.1|CW467620 fsbb001f219g07f0 Sorghum methylation... 60 4e-007
gb|CF486816.1|CF486816 POL1_39_H12.g1_A002 Pollen Sorghum b... 60 4e-007
gb|CX614480.1|CX614480 GABR1_14_G09.b1_A002 GA- or brassino... 60 4e-007
gb|CW209554.1|CW209554 104_639_11189310_116_36992_021 Sorgh... 56 7e-006
gb|CW219041.1|CW219041 104_652_11196508_148_37533_002 Sorgh... 56 7e-006
gb|CW344135.1|CW344135 104_846_11487797_116_36189_019 Sorgh... 56 7e-006
gb|CW028818.1|CW028818 104_256_10499320_116_30400 Sorghum m... 54 3e-005
gb|CW263776.1|CW263776 104_732_11230904_148_35236_028 Sorgh... 54 3e-005
gb|CW358431.1|CW358431 fsbb001f025j05k0 Sorghum methylation... 54 3e-005
gb|CW167896.1|CW167896 104_577_11153849_148_36496_075 Sorgh... 52 1e-004
gb|CW236610.1|CW236610 104_692_11215707_116_37501_006 Sorgh... 52 1e-004
gb|CW277521.1|CW277521 104_751_11406073_116_35411_005 Sorgh... 52 1e-004
gb|CW303081.1|CW303081 104_787_11465053_148_35670_055 Sorgh... 52 1e-004
gb|CW315654.1|CW315654 104_806_11472478_116_35826_083 Sorgh... 52 1e-004
gb|CW409198.1|CW409198 fsbb001f103g14f0 Sorghum methylation... 52 1e-004
gb|BE363468.1|BE363468 WS1_63_B06.g1_A002 Water-stressed 1 ... 52 1e-004
gb|CW029447.1|CW029447 104_257_10499681_116_30402 Sorghum m... 50 4e-004
gb|CW051896.1|CW051896 104_292_10515394_115_30190 Sorghum m... 50 4e-004
gb|CW051897.1|CW051897 104_292_10515394_115_30287 Sorghum m... 50 4e-004
gb|CW162435.1|CW162435 104_569_11150941_148_36443_051 Sorgh... 50 4e-004
gb|CW203946.1|CW203946 104_631_11186281_148_36907_003 Sorgh... 50 4e-004
gb|CW447301.1|CW447301 fsbb001f180f18k0 Sorghum methylation... 50 4e-004
gb|BG411388.1|BG411388 EM1_57_E10.g1_A002 Embryo 1 (EM1) So... 50 4e-004
gb|CL185025.1|CL185025 104_398_10899248_114_32369_020 Sorgh... 48 0.002
gb|CL190425.1|CL190425 104_408_10906074_116_32504_071 Sorgh... 48 0.002
gb|CW061720.1|CW061720 104_305_10520553_114_30152 Sorghum m... 48 0.002
gb|CW162434.1|CW162434 104_569_11150941_116_36444_051 Sorgh... 48 0.002
gb|CW187148.1|CW187148 104_605_11166940_116_36720_010 Sorgh... 48 0.002
gb|CX606668.1|CX606668 ANR1_4_G07.b1_A002 Anaerobic roots S... 48 0.002
gb|CL169524.1|CL169524 104_368_10812693_148_31808_165 Sorgh... 46 0.007
gb|CL190026.1|CL190026 104_407_10905785_116_32481_067 Sorgh... 46 0.007
gb|CL192577.1|CL192577 104_415_10940344_116_32263_056 Sorgh... 46 0.007
gb|CW220432.1|CW220432 104_655_11197347_116_37153_014 Sorgh... 46 0.007
gb|CW220433.1|CW220433 104_655_11197347_148_37154_014 Sorgh... 46 0.007
gb|CW365814.1|CW365814 fsbb001f038i09f0 Sorghum methylation... 46 0.007
gb|CW365815.1|CW365815 fsbb001f038i09k0 Sorghum methylation... 46 0.007
gb|CW437515.1|CW437515 fsbb001f154k21f0 Sorghum methylation... 46 0.007
gb|CW471505.1|CW471505 fsbb001f225h10f0 Sorghum methylation... 46 0.007
gb|CW475797.1|CW475797 fsbb001f232f15f0 Sorghum methylation... 46 0.007
gb|BE357034.1|BE357034 DG1_146_G10.b1_A002 Dark Grown 1 (DG... 46 0.007
gb|BE357084.1|BE357084 DG1_146_G10.g1_A002 Dark Grown 1 (DG... 46 0.007
gb|BE357349.1|BE357349 DG1_148_C05.g1_A002 Dark Grown 1 (DG... 46 0.007
gb|CD231094.1|CD231094 SS1_8_E05.b1_A012 Salt-stressed seed... 46 0.007
gb|CD235990.1|CD235990 SS1_25_B04.b1_A012 Salt-stressed see... 46 0.007
gb|CW024950.1|CW024950 104_226_10487876_116_30523 Sorghum m... 44 0.026
gb|CW277776.1|CW277776 104_752_11406206_148_35418_063 Sorgh... 44 0.026
gb|CW449893.1|CW449893 fsbb001f188e03k0 Sorghum methylation... 44 0.026
gb|CB926347.1|CB926347 ABA1_8_G03.b1_A012 Abscisic acid-tre... 44 0.026
gb|CB926950.1|CB926950 ABA1_11_B02.b1_A012 Abscisic acid-tr... 44 0.026
gb|CD426207.1|CD426207 SA1_19_E09.b1_A002 Salicylic acid-tr... 44 0.026
gb|CF073799.1|CF073799 FE1_12_E11.b1_A002 Iron-deficient se... 44 0.026
gb|CN138029.1|CN138029 OX1_61_F11.b1_A002 Oxidatively-stres... 44 0.026
gb|CN138113.1|CN138113 OX1_61_F11.g1_A002 Oxidatively-stres... 44 0.026
gb|CL149078.1|CL149078 104_329_10593534_148_31784_274 Sorgh... 42 0.10
gb|CL185830.1|CL185830 104_400_10899807_114_32398_060 Sorgh... 42 0.10
gb|CL194299.1|CL194299 104_418_10941524_116_32288_070 Sorgh... 42 0.10
gb|CW166555.1|CW166555 104_575_11153116_116_36765_010 Sorgh... 42 0.10
gb|CW208733.1|CW208733 104_638_11188843_148_36982_074 Sorgh... 42 0.10
gb|CW232538.1|CW232538 104_685_11212872_148_37363_092 Sorgh... 42 0.10
gb|CW239896.1|CW239896 104_698_11217909_116_37504_089 Sorgh... 42 0.10
gb|CW239897.1|CW239897 104_698_11217909_148_37505_089 Sorgh... 42 0.10
gb|CW251982.1|CW251982 104_714_11224241_116_35066_065 Sorgh... 42 0.10
gb|CW254593.1|CW254593 104_718_11225758_148_35117_083 Sorgh... 42 0.10
gb|CW302989.1|CW302989 104_787_11465006_148_35671_057 Sorgh... 42 0.10
gb|CW307346.1|CW307346 104_795_11468092_116_35729_010 Sorgh... 42 0.10
gb|CW307347.1|CW307347 104_795_11468092_148_35737_010 Sorgh... 42 0.10
gb|CW313572.1|CW313572 104_803_11471355_116_35786_002 Sorgh... 42 0.10
gb|CW313573.1|CW313573 104_803_11471355_148_35790_002 Sorgh... 42 0.10
gb|CW411820.1|CW411820 fsbb001f107c15k0 Sorghum methylation... 42 0.10
gb|CW437963.1|CW437963 fsbb001f155f12f0 Sorghum methylation... 42 0.10
gb|CW438119.1|CW438119 fsbb001f155j05f0 Sorghum methylation... 42 0.10
gb|CW451432.1|CW451432 fsbb001f191i03f0 Sorghum methylation... 42 0.10
gb|CW452216.1|CW452216 fsbb001f192k08k0 Sorghum methylation... 42 0.10
gb|CW496055.1|CW496055 fsbb001f288b11k0 Sorghum methylation... 42 0.10
gb|AW671465.1|AW671465 LG1_347_B06.b1_A002 Light Grown 1 (L... 42 0.10
gb|AW923519.1|AW923519 DG1_52_C12.g1_A002 Dark Grown 1 (DG1... 42 0.10
gb|BE355004.1|BE355004 DG1_10_G03.b1_A002 Dark Grown 1 (DG1... 42 0.10
gb|BE593687.1|BE593687 WS1_99_F12.b1_A002 Water-stressed 1 ... 42 0.10
gb|BG241163.1|BG241163 OV1_39_A04.b1_A002 Ovary 1 (OV1) Sor... 42 0.10
gb|BE364586.2|BE364586 PI1_15_G08.g1_A002 Pathogen induced ... 42 0.10
gb|CF487063.1|CF487063 POL1_41_B10.g1_A002 Pollen Sorghum b... 42 0.10
gb|CL163087.1|CL163087 104_356_10806883_116_31811_019 Sorgh... 40 0.41
gb|CW091182.1|CW091182 104_453_10998407_114_33028_096 Sorgh... 40 0.41
gb|CW091183.1|CW091183 104_453_10998407_116_33032_096 Sorgh... 40 0.41
gb|CW169998.1|CW169998 104_580_11154972_116_36512_044 Sorgh... 40 0.41
gb|CW177288.1|CW177288 104_590_11158945_116_36590_005 Sorgh... 40 0.41
gb|CW179130.1|CW179130 104_593_11159937_148_36629_045 Sorgh... 40 0.41
gb|CW217040.1|CW217040 104_650_11195443_148_37130_078 Sorgh... 40 0.41
gb|CW223771.1|CW223771 104_659_11203093_116_37189_051 Sorgh... 40 0.41
gb|CW249523.1|CW249523 104_711_11222896_116_35042_058 Sorgh... 40 0.41
gb|CW249524.1|CW249524 104_711_11222896_148_35046_058 Sorgh... 40 0.41
gb|CW255118.1|CW255118 104_719_11226054_148_35127_021 Sorgh... 40 0.41
gb|CW298408.1|CW298408 104_781_11462563_116_35658_080 Sorgh... 40 0.41
gb|CW310548.1|CW310548 104_799_11469772_116_35746_004 Sorgh... 40 0.41
gb|CW323782.1|CW323782 104_818_11476813_116_35902_061 Sorgh... 40 0.41
gb|CW346601.1|CW346601 fsbb001f006d02f0 Sorghum methylation... 40 0.41
gb|CW412401.1|CW412401 fsbb001f108a11f0 Sorghum methylation... 40 0.41
gb|CW412589.1|CW412589 fsbb001f108e18f0 Sorghum methylation... 40 0.41
gb|CW412590.1|CW412590 fsbb001f108e18k0 Sorghum methylation... 40 0.41
gb|CW431475.1|CW431475 fsbb001f145l06f0 Sorghum methylation... 40 0.41
gb|CW460141.1|CW460141 fsbb001f207d15f0 Sorghum methylation... 40 0.41
gb|CW461886.1|CW461886 fsbb001f209m04f0 Sorghum methylation... 40 0.41
gb|CW475053.1|CW475053 fsbb001f231d17k0 Sorghum methylation... 40 0.41
gb|CW477959.1|CW477959 fsbb001f235j04f0 Sorghum methylation... 40 0.41
gb|AW284606.1|AW284606 LG1_271_C02.g1_A002 Light Grown 1 (L... 40 0.41
gb|AW679122.1|AW679122 WS1_22_E08.g1_A002 Water-stressed 1 ... 40 0.41
gb|BE360432.1|BE360432 DG1_63_A06.g1_A002 Dark Grown 1 (DG1... 40 0.41
gb|BE361351.1|BE361351 DG1_71_C04.g1_A002 Dark Grown 1 (DG1... 40 0.41
gb|BE362158.1|BE362158 DG1_84_E06.g1_A002 Dark Grown 1 (DG1... 40 0.41
gb|CB925266.1|CB925266 ABA1_32_F07.b1_A012 Abscisic acid-tr... 40 0.41
gb|CB927624.1|CB927624 ABA1_27_F06.b1_A012 Abscisic acid-tr... 40 0.41
gb|CD223127.1|CD223127 CCC1_26_D11.b1_A007 Callus culture/c... 40 0.41
gb|CD225266.1|CD225266 CCC1_39_E05.b1_A007 Callus culture/c... 40 0.41
gb|CD229006.1|CD229006 CCC1_11_D05.b1_A007 Callus culture/c... 40 0.41
gb|CF434115.1|CF434115 NIT1_32_A09.b1_A002 Nitrogen-deficie... 40 0.41
gb|CX622089.1|CX622089 GABR1_62_A08.b2_A002 GA- or brassino... 40 0.41
gb|AF199453.1|AF199453 Sorghum bicolor UDP-glucose glucosyl... 40 0.41
emb|AX163853.1| Sequence 2 from Patent WO0140491 40 0.41
>gb|CW462705.1|CW462705 fsbb001f210p13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f210p13, DNA
sequence
Length = 646
Score = 870 bits (439), Expect = 0.0
Identities = 568/611 (92%)
Strand = Plus / Plus
Query: 172 ggctgcttcacggcgccccaagcgcacgagatagcgcacggcctggaccgcagcgggcat 231
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct: 34 ggctgcttcacggcgccgcaagcgcacgagatagcgcacggcctggaccgcagcgggcgt 93
Query: 232 cgattcctgtgggtgctgcgcgggacgccggagcccggcacgaagttgccctcggacggg 291
|||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||
Sbjct: 94 cgattcctgtgggtgctgcgcgggctgccggagcccggcacgaagatgcccgcggacggg 153
Query: 292 aacctcgcggagctgcttccggcggatttcttggcgaggacgaaggatagagggctcgtg 351
||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||||||||
Sbjct: 154 aacctcgcggagctgcttccggcggggttcttggagaggacaaaggacagagggctcgtg 213
Query: 352 tggcctaccaaggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtc 411
||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 214 tggcccaccaaggcgccgcagaaggagatactcgcccacgccgccgtgggaggtttcgtc 273
Query: 412 acgcactgtggctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgcca 471
|||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct: 274 acgcacggtggctggaactcaatcctcgagagcctctggcatggcgtgccgatggttccg 333
Query: 472 tggccgcttggcgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtc 531
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tggccgctcggcgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtc 393
Query: 532 gccgtggcgctgaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggag 591
||||||||| || ||||||||||||||||| || ||||||| |||| |||||||||||
Sbjct: 394 gccgtggcgatgggcgtggaaaggaagaggagcaacttcgtggcggcggccgagctggag 453
Query: 592 cgagcggttaaagctctgatgtgcgacggcgagacagcgaggaaggttagggacaaggtc 651
|||||||| |||||||| ||| ||||||||||||| | ||||||||||||||||||||||
Sbjct: 454 cgagcggtcaaagctctcatgggcgacggcgagacggtgaggaaggttagggacaaggtc 513
Query: 652 atggagataaaagccgcgtgccggaaggcaatggaggagggcggatcatcgaacatgtcg 711
| |||||| ||||||||||||||||||||| |||||||||| |||||||| ||| |||||
Sbjct: 514 acggagatgaaagccgcgtgccggaaggcagtggaggagggaggatcatccaacgtgtcg 573
Query: 712 ttgcagaggctctgtgatgcgctcgtcgaaggcgcggtgcacccgggaaagtgatgccca 771
|||||||||||||||||||||||||| | ||||||||||||||| |||||||||||| |
Sbjct: 574 ctgcagaggctctgtgatgcgctcgtcaagggcgcggtgcacccgagaaagtgatgccga 633
Query: 772 cagagttcaat 782
|||||||||||
Sbjct: 634 cagagttcaat 644
>gb|CW462704.1|CW462704 fsbb001f210p13f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f210p13, DNA
sequence
Length = 683
Score = 446 bits (225), Expect = e-123
Identities = 306/333 (91%)
Strand = Plus / Minus
Query: 450 gcatggcgtgccgatggtgccatggccgcttggcgccgagcagcactacaacgcgttcac 509
|||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||
Sbjct: 683 gcatggcgtgccgatggttccgtggccgctcggcgccgagcagcactacaacgcgttcac 624
Query: 510 gctggtggccgacatgggcgtcgccgtggcgctgaacgtggaaaggaagaggaagaattt 569
||||||||||||||||||||||||||||||| || ||||||||||||||||| || ||
Sbjct: 623 gctggtggccgacatgggcgtcgccgtggcgatgggcgtggaaaggaagaggagcaactt 564
Query: 570 cgtggaggcgaccgagctggagcgagcggttaaagctctgatgtgcgacggcgagacagc 629
||||| |||| ||||||||||||||||||| |||||||| ||| ||||||||||||| |
Sbjct: 563 cgtggcggcggccgagctggagcgagcggtcaaagctctcatgggcgacggcgagacggt 504
Query: 630 gaggaaggttagggacaaggtcatggagataaaagccgcgtgccggaaggcaatggagga 689
||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||
Sbjct: 503 gaggaaggttagggacaaggtcacggagatgaaagccgcgtgccggaaggcagtggagga 444
Query: 690 gggcggatcatcgaacatgtcgttgcagaggctctgtgatgcgctcgtcgaaggcgcggt 749
||| |||||||| ||| ||||| |||||||||||||||||||||||||| | ||||||||
Sbjct: 443 gggaggatcatccaacgtgtcgctgcagaggctctgtgatgcgctcgtcaagggcgcggt 384
Query: 750 gcacccgggaaagtgatgcccacagagttcaat 782
||||||| |||||||||||| ||||||||||||
Sbjct: 383 gcacccgagaaagtgatgccgacagagttcaat 351
>gb|CW468073.1|CW468073 fsbb001f220a14k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f220a14, DNA
sequence
Length = 477
Score = 295 bits (149), Expect = 4e-078
Identities = 240/269 (89%), Gaps = 1/269 (0%)
Strand = Plus / Minus
Query: 515 tggccgacatgggcgtcgccgtggcgctgaacgtggaaaggaagaggaagaatttcgtgg 574
||||||||||||||||| |||||||| || ||||||||||||||||| || |||||||
Sbjct: 477 tggccgacatgggcgtccccgtggcgatgggcgtggaaaggaagaggagcaacttcgtgg 418
Query: 575 aggcgacc-gagctggagcgagcggttaaagctctgatgtgcgacggcgagacagcgagg 633
|||| || ||||||||||||||||| |||||||| ||| ||||||||||||| | ||||
Sbjct: 417 cggcggcccgagctggagcgagcggtcaaagctctcatgggcgacggcgagacggtgagg 358
Query: 634 aaggttagggacaaggtcatggagataaaagccgcgtgccggaaggcaatggaggagggc 693
|||||||||| |||||||| |||||| |||||||||||||||||| || ||||||||||
Sbjct: 357 aaggttagggccaaggtcacggagatgaaagccgcgtgccggaagccagtggaggaggga 298
Query: 694 ggatcatcgaacatgtcgttgcagaggctctgtgatgcgctcgtcgaaggcgcggtgcac 753
|||||||| ||| ||||| |||||||||||||||||||||||||| | ||||||||||||
Sbjct: 297 ggatcatccaacgtgtcgctgcagaggctctgtgatgcgctcgtcaagggcgcggtgcac 238
Query: 754 ccgggaaagtgatgcccacagagttcaat 782
||| |||||||||||| |||||||||||
Sbjct: 237 ccgagaaagtgatgccgccagagttcaat 209
>gb|CW388737.1|CW388737 fsbb001f073k02k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f073k02, DNA
sequence
Length = 456
Score = 293 bits (148), Expect = 2e-077
Identities = 286/332 (86%)
Strand = Plus / Plus
Query: 205 gcgcacggcctggaccgcagcgggcatcgattcctgtgggtgctgcgcgggacgccggag 264
||||||| ||||||||||||||| || || ||||||||||||||||||||| ||||||||
Sbjct: 46 gcgcacgccctggaccgcagcggccaccgcttcctgtgggtgctgcgcgggccgccggag 105
Query: 265 cccggcacgaagttgccctcggacgggaacctcgcggagctgcttccggcggatttcttg 324
| ||| |||||| || ||||||||||| |||| || |||||||| ||| ||| ||||||
Sbjct: 106 cacgggacgaagctgtcctcggacggggacctggccgagctgctcccgccggggttcttg 165
Query: 325 gcgaggacgaaggatagagggctcgtgtggcctaccaaggcgccgcagaaggagatactc 384
| ||||||||| | || |||||||||||||| | |||||||||||||||||| ||
Sbjct: 166 gagaggacgaaaggcagggggctcgtgtggccgaagtgggcgccgcagaaggagatcctg 225
Query: 385 gcccacgccgccgtgggaggcttcgtcacgcactgtggctggaactcggtcctcgagagc 444
|| ||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 226 gcgcacgccgccgtcggaggcttcgtcacgcactgcggctggaactcggtgctcgagagc 285
Query: 445 ctctggcatggcgtgccgatggtgccatggccgcttggcgccgagcagcactacaacgcg 504
|| ||| |||||||| ||| |||| |||||| | |||||||||||||||||||||
Sbjct: 286 ctgtggttcggcgtgcccatgctgccgtggccgtgggccgccgagcagcactacaacgcc 345
Query: 505 ttcacgctggtggccgacatgggcgtcgccgt 536
|||||||||||||||| |||||| ||||||||
Sbjct: 346 ttcacgctggtggccggcatgggggtcgccgt 377
>gb|CW057284.1|CW057284 104_299_10518136_115_30171 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10518136, DNA
sequence
Length = 572
Score = 232 bits (117), Expect = 5e-059
Identities = 294/353 (83%)
Strand = Plus / Minus
Query: 349 gtgtggcctaccaaggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttc 408
|||||||| || |||||||| || || |||||||| |||||||||||| |||| || |||
Sbjct: 402 gtgtggccgacgaaggcgccacaaaaagagatactagcccacgccgccatgggtggtttc 343
Query: 409 gtcacgcactgtggctggaactcggtcctcgagagcctctggcatggcgtgccgatggtg 468
|| || ||| | |||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 342 gtgacacacggcggctggaactcggtcctcgagagcctgtggtttggcgtgccgatggca 283
Query: 469 ccatggccgcttggcgccgagcagcactacaacgcgttcacgctggtggccgacatgggc 528
|| |||||||| ||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 282 ccgtggccgctgtacgccgagcagcacctgaacgcgttcacgctggtggcctacatgggc 223
Query: 529 gtcgccgtggcgctgaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctg 588
|||||||||||| |||| ||||| ||||||||||| ||||||||||| || | ||||||
Sbjct: 222 gtcgccgtggcgatgaaggtggacaggaagaggaacaatttcgtggatgccgcggagctg 163
Query: 589 gagcgagcggttaaagctctgatgtgcgacggcgagacagcgaggaaggttagggacaag 648
||||||||||| || | |||||| ||| |||||| | |||||||| ||||| |||
Sbjct: 162 gagcgagcggtgaaggagctgatgggcggtggcgaggaggggaggaaggcgagggagaag 103
Query: 649 gtcatggagataaaagccgcgtgccggaaggcaatggaggagggcggatcatc 701
| ||||||||| || ||||| | | |||| || |||||||||| || |||||
Sbjct: 102 gccatggagatgaaggccgccttcaggaacgccgtggaggagggtggctcatc 50
Score = 79.8 bits (40), Expect = 5e-013
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 179 tcacggcgccccaagcgcacgagatagcgcacggcctggaccgcagcgggcatcgattcc 238
|||| ||||| || ||||||||||| |||||||||||||| |||||||| || || ||||
Sbjct: 572 tcactgcgccacaggcgcacgagatcgcgcacggcctggagcgcagcggccaccgcttcc 513
Query: 239 tgtgggtgctgcgcgg 254
| ||||||||||||||
Sbjct: 512 tctgggtgctgcgcgg 497
>gb|CW069511.1|CW069511 104_319_10525937_1_30093 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10525937, DNA
sequence
Length = 609
Score = 232 bits (117), Expect = 5e-059
Identities = 342/417 (82%)
Strand = Plus / Minus
Query: 208 cacggcctggaccgcagcgggcatcgattcctgtgggtgctgcgcgggacgccggagccc 267
||||||||||| ||||||||||| || ||||| |||||||||||||| | |||| ||||
Sbjct: 603 cacggcctggagcgcagcgggcaccggttcctctgggtgctgcgcggcgcaccggcgccc 544
Query: 268 ggcacgaagttgccctcggacgggaacctcgcggagctgcttccggcggatttcttggcg 327
| ||||| | ||| |||||| | |||| ||||||||||| |||| || ||| | | |
Sbjct: 543 gacacgaggagccccacggacgcggacctggcggagctgctcccggagggcttcgtcgag 484
Query: 328 aggacgaaggatagagggctcgtgtggcctaccaaggcgccgcagaaggagatactcgcc 387
|||||| | | || |||||||||||||| || | ||||||||||||||| |||||
Sbjct: 483 cggacgaggaacagggggctcgtgtggccgacggcagtgccgcagaaggagatcctcgcg 424
Query: 388 cacgccgccgtgggaggcttcgtcacgcactgtggctggaactcggtcctcgagagcctc 447
||||| |||||||| |||||||| |||||||| || |||||||| ||||| ||||||||
Sbjct: 423 cacgcggccgtgggcggcttcgtgacgcactgcgggtggaactcagtcctggagagcctg 364
Query: 448 tggcatggcgtgccgatggtgccatggccgcttggcgccgagcagcactacaacgcgttc 507
||| |||||||| |||| ||| |||||||| ||||||||||||| |||||||||
Sbjct: 363 tggttcggcgtgcccatggcgccgtggccgctgtacgccgagcagcacctgaacgcgttc 304
Query: 508 acgctggtggccgacatgggcgtcgccgtggcgctgaacgtggaaaggaagaggaagaat 567
|||||||||||| ||||||||||||||||||| || | ||||| ||||||||| | ||
Sbjct: 303 gcgctggtggccgccatgggcgtcgccgtggcgatggaggtggacaggaagagggacaac 244
Query: 568 ttcgtggaggcgaccgagctggagcgagcggttaaagctctgatgtgcgacggcgag 624
|||||||||||| | ||||||||||| || || || || |||||| | |||||||||
Sbjct: 243 ttcgtggaggcggcggagctggagcgggctgtgaaggcgctgatgggtgacggcgag 187
>gb|CW334933.1|CW334933 104_833_11482765_148_36071_053 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11482765, DNA
sequence
Length = 692
Score = 232 bits (117), Expect = 5e-059
Identities = 294/353 (83%)
Strand = Plus / Plus
Query: 349 gtgtggcctaccaaggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttc 408
|||||||| || |||||||| || || |||||||| |||||||||||| |||| || |||
Sbjct: 220 gtgtggccgacgaaggcgccacaaaaagagatactagcccacgccgccatgggtggtttc 279
Query: 409 gtcacgcactgtggctggaactcggtcctcgagagcctctggcatggcgtgccgatggtg 468
|| || ||| | |||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 280 gtgacacacggcggctggaactcggtcctcgagagcctgtggtttggcgtgccgatggca 339
Query: 469 ccatggccgcttggcgccgagcagcactacaacgcgttcacgctggtggccgacatgggc 528
|| |||||||| ||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 340 ccgtggccgctgtacgccgagcagcacctgaacgcgttcacgctggtggcctacatgggc 399
Query: 529 gtcgccgtggcgctgaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctg 588
|||||||||||| |||| ||||| ||||||||||| ||||||||||| || | ||||||
Sbjct: 400 gtcgccgtggcgatgaaggtggacaggaagaggaacaatttcgtggatgccgcggagctg 459
Query: 589 gagcgagcggttaaagctctgatgtgcgacggcgagacagcgaggaaggttagggacaag 648
||||||||||| || | |||||| ||| |||||| | |||||||| ||||| |||
Sbjct: 460 gagcgagcggtgaaggagctgatgggcggtggcgaggaggggaggaaggcgagggagaag 519
Query: 649 gtcatggagataaaagccgcgtgccggaaggcaatggaggagggcggatcatc 701
| ||||||||| || ||||| | | |||| || |||||||||| || |||||
Sbjct: 520 gccatggagatgaaggccgccttcaggaacgccgtggaggagggtggctcatc 572
Score = 85.7 bits (43), Expect = 8e-015
Identities = 98/115 (85%), Gaps = 1/115 (0%)
Strand = Plus / Plus
Query: 141 ctccgtggtgttc-ctatgcttcggcagcggtggctgcttcacggcgccccaagcgcacg 199
|||||||||| || || |||||||| ||||| || | |||||| ||||| || |||||||
Sbjct: 11 ctccgtggtgctctctctgcttcgggagcggagggttcttcactgcgccacaggcgcacg 70
Query: 200 agatagcgcacggcctggaccgcagcgggcatcgattcctgtgggtgctgcgcgg 254
|||| |||||||||||||| ||||| || || || ||||| ||||||||||||||
Sbjct: 71 agatcgcgcacggcctggagcgcagtggccaccgcttcctctgggtgctgcgcgg 125
>gb|CW439239.1|CW439239 fsbb001f157e12k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f157e12, DNA
sequence
Length = 764
Score = 232 bits (117), Expect = 5e-059
Identities = 294/353 (83%)
Strand = Plus / Minus
Query: 349 gtgtggcctaccaaggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttc 408
|||||||| || |||||||| || || |||||||| |||||||||||| |||| || |||
Sbjct: 511 gtgtggccgacgaaggcgccacaaaaagagatactagcccacgccgccatgggtggtttc 452
Query: 409 gtcacgcactgtggctggaactcggtcctcgagagcctctggcatggcgtgccgatggtg 468
|| || ||| | |||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 451 gtgacacacggcggctggaactcggtcctcgagagcctgtggtttggcgtgccgatggca 392
Query: 469 ccatggccgcttggcgccgagcagcactacaacgcgttcacgctggtggccgacatgggc 528
|| |||||||| ||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 391 ccgtggccgctgtacgccgagcagcacctgaacgcgttcacgctggtggcctacatgggc 332
Query: 529 gtcgccgtggcgctgaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctg 588
|||||||||||| |||| ||||| ||||||||||| ||||||||||| || | ||||||
Sbjct: 331 gtcgccgtggcgatgaaggtggacaggaagaggaacaatttcgtggatgccgcggagctg 272
Query: 589 gagcgagcggttaaagctctgatgtgcgacggcgagacagcgaggaaggttagggacaag 648
||||||||||| || | |||||| ||| |||||| | |||||||| ||||| |||
Sbjct: 271 gagcgagcggtgaaggagctgatgggcggtggcgaggaggggaggaaggcgagggagaag 212
Query: 649 gtcatggagataaaagccgcgtgccggaaggcaatggaggagggcggatcatc 701
| ||||||||| || ||||| | | |||| || |||||||||| || |||||
Sbjct: 211 gccatggagatgaaggccgccttcaggaacgccgtggaggagggtggctcatc 159
Score = 123 bits (62), Expect = 4e-026
Identities = 129/150 (86%), Gaps = 1/150 (0%)
Strand = Plus / Minus
Query: 106 gagtgcgtgcgctggctcgactcgcagcctccgagc-tccgtggtgttcctatgcttcgg 164
|||||||||| ||||||||| ||||||| ||| || ||||||||| |||| ||||||||
Sbjct: 755 gagtgcgtgcagtggctcgacacgcagcccccgggcctccgtggtgctcctctgcttcgg 696
Query: 165 cagcggtggctgcttcacggcgccccaagcgcacgagatagcgcacggcctggaccgcag 224
||||| || | |||||| ||||| || ||||||||||| |||||||||||||| |||||
Sbjct: 695 gagcggagggttcttcactgcgccacaggcgcacgagatcgcgcacggcctggagcgcag 636
Query: 225 cgggcatcgattcctgtgggtgctgcgcgg 254
||| || || ||||| ||||||||||||||
Sbjct: 635 cggccaccgcttcctctgggtgctgcgcgg 606
>gb|CW412501.1|CW412501 fsbb001f108c15f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f108c15, DNA
sequence
Length = 618
Score = 228 bits (115), Expect = 8e-058
Identities = 217/251 (86%)
Strand = Plus / Plus
Query: 349 gtgtggcctaccaaggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttc 408
|||||||| || |||||||| || || |||||||| |||||||||||| |||| || |||
Sbjct: 347 gtgtggccgacgaaggcgccacaaaaagagatactagcccacgccgccatgggtggtttc 406
Query: 409 gtcacgcactgtggctggaactcggtcctcgagagcctctggcatggcgtgccgatggtg 468
|| || ||| | |||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 407 gtgacacacggcggctggaactcggtcctcgagagcctgtggtttggcgtgccgatggca 466
Query: 469 ccatggccgcttggcgccgagcagcactacaacgcgttcacgctggtggccgacatgggc 528
|| |||||||| ||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 467 ccgtggccgctgtacgccgagcagcacctgaacgcgttcacgctggtggcctacatgggc 526
Query: 529 gtcgccgtggcgctgaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctg 588
|||||||||||| |||| ||||| ||||||||||| ||||||||||| || | ||||||
Sbjct: 527 gtcgccgtggcgatgaaggtggacaggaagaggaacaatttcgtggatgccgcggagctg 586
Query: 589 gagcgagcggt 599
|||||||||||
Sbjct: 587 gagcgagcggt 597
Score = 129 bits (65), Expect = 6e-028
Identities = 128/149 (85%)
Strand = Plus / Plus
Query: 106 gagtgcgtgcgctggctcgactcgcagcctccgagctccgtggtgttcctatgcttcggc 165
|||||||||| ||||||||| ||||||| ||| |||||||||| |||| ||||||||
Sbjct: 104 gagtgcgtgcagtggctcgacacgcagcccccggcctccgtggtgctcctctgcttcggg 163
Query: 166 agcggtggctgcttcacggcgccccaagcgcacgagatagcgcacggcctggaccgcagc 225
||||| || | |||||| ||||| || ||||||||||| |||||||||||||| ||||||
Sbjct: 164 agcggagggttcttcactgcgccacaggcgcacgagatcgcgcacggcctggagcgcagc 223
Query: 226 gggcatcgattcctgtgggtgctgcgcgg 254
|| || || ||||| ||||||||||||||
Sbjct: 224 ggccaccgcttcctctgggtgctgcgcgg 252
Score = 54.0 bits (27), Expect = 3e-005
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 4 gccatcgccgacgggcggtgcacgcgtggtg 34
|||||||||||||||||||||||||| ||||
Sbjct: 2 gccatcgccgacgggcggtgcacgcgcggtg 32
>gb|CW106991.1|CW106991 104_476_11096301_116_34468_081 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11096301, DNA
sequence
Length = 577
Score = 220 bits (111), Expect = 2e-055
Identities = 309/375 (82%)
Strand = Plus / Minus
Query: 327 gaggacgaaggatagagggctcgtgtggcctaccaaggcgccgcagaaggagatactcgc 386
|||||| |||| ||||| || |||||||| || |||||||||||||| ||| |||| ||
Sbjct: 434 gaggaccaagggcagaggcctggtgtggccgacgaaggcgccgcagaaagaggtacttgc 375
Query: 387 ccacgccgccgtgggaggcttcgtcacgcactgtggctggaactcggtcctcgagagcct 446
||||||||| |||| || ||||| || ||| | ||||||||||||||||||||||||||
Sbjct: 374 gcacgccgccatgggtggtttcgtgacacacggcggctggaactcggtcctcgagagcct 315
Query: 447 ctggcatggcgtgccgatggtgccatggccgcttggcgccgagcagcactacaacgcgtt 506
||| |||||||| |||| || |||||||| ||||||||||||| ||||||||
Sbjct: 314 gtggttcggcgtgccaatggcaccgtggccgctgtacgccgagcagcacctgaacgcgtt 255
Query: 507 cacgctggtggccgacatgggcgtcgccgtggcgctgaacgtggaaaggaagaggaagaa 566
||||||||||||| |||||||||||||||||||| |||| ||||| ||||||||||| ||
Sbjct: 254 cacgctggtggcctacatgggcgtcgccgtggcgatgaaggtggacaggaagaggaacaa 195
Query: 567 tttcgtggaggcgaccgagctggagcgagcggttaaagctctgatgtgcgacggcgagac 626
|||||| ||||| | ||||||||||||||||| || | |||||| ||| ||||||
Sbjct: 194 tttcgttgaggccgcggagctggagcgagcggtgaaggagctgatgggcggtggcgagga 135
Query: 627 agcgaggaaggttagggacaaggtcatggagataaaagccgcgtgccggaaggcaatgga 686
| |||||||| ||||| |||| ||||||||| || ||||| | | |||| || ||||
Sbjct: 134 ggggaggaaggcgagggagaaggccatggagatgaaggccgccttcaggaacgccgtgga 75
Query: 687 ggagggcggatcatc 701
|||||| || |||||
Sbjct: 74 ggagggtggctcatc 60
Score = 77.8 bits (39), Expect = 2e-012
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 184 gcgccccaagcgcacgagatagcgcacggcctggaccgcagcgggcatcgattcctgtgg 243
||||| || ||||||||| | |||||||||||||| |||||||| ||||| ||||| |||
Sbjct: 577 gcgccacaggcgcacgagctcgcgcacggcctggagcgcagcggccatcgcttcctctgg 518
Query: 244 gtgctgcgcgg 254
|||||||||||
Sbjct: 517 gtgctgcgcgg 507
>gb|CW223772.1|CW223772 104_659_11203093_148_37190_051 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11203093, DNA
sequence
Length = 626
Score = 216 bits (109), Expect = 3e-054
Identities = 232/273 (84%)
Strand = Plus / Plus
Query: 327 gaggacgaaggatagagggctcgtgtggcctaccaaggcgccgcagaaggagatactcgc 386
|||||| |||| ||||| || |||||||| || |||||||||||||| ||| |||| ||
Sbjct: 353 gaggaccaagggcagaggcctggtgtggccgacgaaggcgccgcagaaagaggtacttgc 412
Query: 387 ccacgccgccgtgggaggcttcgtcacgcactgtggctggaactcggtcctcgagagcct 446
||||||||| |||| || ||||| || ||| | ||||||||||||||||||||||||||
Sbjct: 413 gcacgccgccatgggtggtttcgtgacacacggcggctggaactcggtcctcgagagcct 472
Query: 447 ctggcatggcgtgccgatggtgccatggccgcttggcgccgagcagcactacaacgcgtt 506
||| |||||||| |||| || |||||||| ||||||||||||| ||||||||
Sbjct: 473 gtggttcggcgtgccaatggcaccgtggccgctgtacgccgagcagcacctgaacgcgtt 532
Query: 507 cacgctggtggccgacatgggcgtcgccgtggcgctgaacgtggaaaggaagaggaagaa 566
||||||||||||| |||||||||||||||||||| |||| ||||| ||||||||||| ||
Sbjct: 533 cacgctggtggcctacatgggcgtcgccgtggcgatgaaggtggacaggaagaggaacaa 592
Query: 567 tttcgtggaggcgaccgagctggagcgagcggt 599
|||||| ||||| | |||||||||||||||||
Sbjct: 593 tttcgttgaggccgcggagctggagcgagcggt 625
Score = 123 bits (62), Expect = 4e-026
Identities = 204/251 (81%), Gaps = 3/251 (1%)
Strand = Plus / Plus
Query: 4 gccatcgccgacgggcggtgcacgcgtggtgtcccggcacctccggtgtactcgatcggg 63
||||||||||||||||||||||||| ||||||| || || |||| || | || ||
Sbjct: 33 gccatcgccgacgggcggtgcacgcccggtgtccgtgccccgacggtctatccaattggc 92
Query: 64 ccggtgatcccctccacnccgcccgccgagcagcaggcgcaggagtgcgtgcgctggctc 123
||||||||| | | ||| |||||||| ||| ||| | || ||||||||||| ||||||
Sbjct: 93 ccggtgatctcgttcaccccgcccgctgaggagc---cacacgagtgcgtgcggtggctc 149
Query: 124 gactcgcagcctccgagctccgtggtgttcctatgcttcggcagcggtggctgcttcacg 183
||| ||||||| | |||||||||| |||| |||||||| |||| || | ||||||
Sbjct: 150 gacacgcagccggtggcctccgtggtgctcctctgcttcgggagcgtgggattcttcacc 209
Query: 184 gcgccccaagcgcacgagatagcgcacggcctggaccgcagcgggcatcgattcctgtgg 243
||||| || ||||||||| | |||||||||||||| |||||||| ||||| ||||| |||
Sbjct: 210 gcgccacaggcgcacgagctcgcgcacggcctggagcgcagcggccatcgcttcctctgg 269
Query: 244 gtgctgcgcgg 254
|||||||||||
Sbjct: 270 gtgctgcgcgg 280
>gb|CW326640.1|CW326640 104_822_11478325_148_35966_063 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11478325, DNA
sequence
Length = 589
Score = 190 bits (96), Expect = 2e-046
Identities = 207/244 (84%)
Strand = Plus / Minus
Query: 327 gaggacgaaggatagagggctcgtgtggcctaccaaggcgccgcagaaggagatactcgc 386
|||||| |||| ||||| || |||||||| || |||||||||||||| ||| |||| ||
Sbjct: 244 gaggaccaagggcagaggcctggtgtggccgacgaaggcgccgcagaaagaggtacttgc 185
Query: 387 ccacgccgccgtgggaggcttcgtcacgcactgtggctggaactcggtcctcgagagcct 446
||||||||| |||| || ||||| || ||| | ||||||||||||||||||||||||||
Sbjct: 184 gcacgccgccatgggtggtttcgtgacacacggcggctggaactcggtcctcgagagcct 125
Query: 447 ctggcatggcgtgccgatggtgccatggccgcttggcgccgagcagcactacaacgcgtt 506
||| |||||||| |||| || |||||||| ||||||||||||| ||||||||
Sbjct: 124 gtggttcggcgtgccaatggcaccgtggccgctgtacgccgagcagcacctgaacgcgtt 65
Query: 507 cacgctggtggccgacatgggcgtcgccgtggcgctgaacgtggaaaggaagaggaagaa 566
||||||||||||| |||||||||||||||||||| |||| ||||| ||||||||||| ||
Sbjct: 64 cacgctggtggcctacatgggcgtcgccgtggcgatgaaggtggacaggaagaggaacaa 5
Query: 567 tttc 570
||||
Sbjct: 4 tttc 1
Score = 123 bits (62), Expect = 4e-026
Identities = 204/251 (81%), Gaps = 3/251 (1%)
Strand = Plus / Minus
Query: 4 gccatcgccgacgggcggtgcacgcgtggtgtcccggcacctccggtgtactcgatcggg 63
||||||||||||||||||||||||| ||||||| || || |||| || | || ||
Sbjct: 564 gccatcgccgacgggcggtgcacgcccggtgtccgtgccccgacggtctatccaattggc 505
Query: 64 ccggtgatcccctccacnccgcccgccgagcagcaggcgcaggagtgcgtgcgctggctc 123
||||||||| | | ||| |||||||| ||| ||| | || ||||||||||| ||||||
Sbjct: 504 ccggtgatctcgttcaccccgcccgctgaggagc---cacacgagtgcgtgcggtggctc 448
Query: 124 gactcgcagcctccgagctccgtggtgttcctatgcttcggcagcggtggctgcttcacg 183
||| ||||||| | |||||||||| |||| |||||||| |||| || | ||||||
Sbjct: 447 gacacgcagccggtggcctccgtggtgctcctctgcttcgggagcgtgggattcttcacc 388
Query: 184 gcgccccaagcgcacgagatagcgcacggcctggaccgcagcgggcatcgattcctgtgg 243
||||| || ||||||||| | |||||||||||||| |||||||| ||||| ||||| |||
Sbjct: 387 gcgccacaggcgcacgagctcgcgcacggcctggagcgcagcggccatcgcttcctctgg 328
Query: 244 gtgctgcgcgg 254
|||||||||||
Sbjct: 327 gtgctgcgcgg 317
>gb|CW338052.1|CW338052 104_838_11484537_148_36123_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11484537, DNA
sequence
Length = 673
Score = 190 bits (96), Expect = 2e-046
Identities = 216/256 (84%)
Strand = Plus / Plus
Query: 369 gcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtggctggaa 428
|||||||||||| ||||| ||||| |||||||| |||||||| |||||||| || |||||
Sbjct: 1 gcagaaggagatcctcgcgcacgcggccgtgggcggcttcgtgacgcactgcgggtggaa 60
Query: 429 ctcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttggcgccga 488
||| ||||| |||||||| ||| |||||||| |||| ||| |||||||| ||||||
Sbjct: 61 ctcagtcctggagagcctgtggttcggcgtgcccatggcgccgtggccgctgtacgccga 120
Query: 489 gcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgctgaacgt 548
||||||| ||||||||| |||||||||||| ||||||||||||||||||| || | ||
Sbjct: 121 gcagcacctgaacgcgttcgcgctggtggccgccatgggcgtcgccgtggcgatggaggt 180
Query: 549 ggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggttaaagctct 608
||| ||||||||| | || |||||||||||| | ||||||||||| || || || || ||
Sbjct: 181 ggacaggaagagggacaacttcgtggaggcggcggagctggagcgggctgtgaaggcgct 240
Query: 609 gatgtgcgacggcgag 624
|||| | |||||||||
Sbjct: 241 gatgggtgacggcgag 256
>gb|CW084531.1|CW084531 104_427_10945849_116_32511_009 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10945849, DNA
sequence
Length = 544
Score = 186 bits (94), Expect = 3e-045
Identities = 169/194 (87%)
Strand = Plus / Minus
Query: 343 gggctcgtgtggcctaccaaggcgccgcagaaggagatactcgcccacgccgccgtggga 402
|||||||||||||| | |||||||||||||||||| || || ||||||||||| |||
Sbjct: 533 gggctcgtgtggccgaagtgggcgccgcagaaggagatcctggcgcacgccgccgtcgga 474
Query: 403 ggcttcgtcacgcactgtggctggaactcggtcctcgagagcctctggcatggcgtgccg 462
||||||||||||||||| |||||||||||||| ||||||||||| ||| ||||||||
Sbjct: 473 ggcttcgtcacgcactgcggctggaactcggtgctcgagagcctgtggttcggcgtgccc 414
Query: 463 atggtgccatggccgcttggcgccgagcagcactacaacgcgttcacgctggtggccgac 522
||| |||| |||||| | ||||||||||||||||||||| |||||||||||||||| |
Sbjct: 413 atgctgccgtggccgtgggccgccgagcagcactacaacgccttcacgctggtggccggc 354
Query: 523 atgggcgtcgccgt 536
||||| ||||||||
Sbjct: 353 atgggggtcgccgt 340
>gb|CW387989.1|CW387989 fsbb001f072j01k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f072j01, DNA
sequence
Length = 733
Score = 178 bits (90), Expect = 7e-043
Identities = 235/282 (83%), Gaps = 1/282 (0%)
Strand = Plus / Minus
Query: 421 ggctggaact-cggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgct 479
|||||||||| |||||||||||||||| ||| |||||||||||||| || ||||||||
Sbjct: 731 ggctggaacttcggtcctcgagagcctgtggtttggcgtgccgatggcaccgtggccgct 672
Query: 480 tggcgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggc 539
||||||||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 671 gtacgccgagcagcacctgaacgcgttcacgctggtggcctacatgggcgtcgccgtggc 612
Query: 540 gctgaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
| |||| ||||| ||||||||||| ||||||||||| || | |||||||||||||||||
Sbjct: 611 gatgaaggtggacaggaagaggaacaatttcgtggatgccgcggagctggagcgagcggt 552
Query: 600 taaagctctgatgtgcgacggcgagacagcgaggaaggttagggacaaggtcatggagat 659
|| | |||||| ||| |||||| | |||||||| ||||| |||| |||||||||
Sbjct: 551 gaaggagctgatgggcggtggcgaggaggggaggaaggcgagggagaaggccatggagat 492
Query: 660 aaaagccgcgtgccggaaggcaatggaggagggcggatcatc 701
|| ||||| | | |||| || |||||||||| || |||||
Sbjct: 491 gaaggccgccttcaggaacgccgtggaggagggtggctcatc 450
>gb|CW387988.1|CW387988 fsbb001f072j01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f072j01, DNA
sequence
Length = 621
Score = 155 bits (78), Expect = 1e-035
Identities = 156/182 (85%)
Strand = Plus / Plus
Query: 349 gtgtggcctaccaaggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttc 408
|||||||| || |||||||| || || |||||||| |||||||||||| |||| || |||
Sbjct: 440 gtgtggccgacgaaggcgccacaaaaagagatactagcccacgccgccatgggtggtttc 499
Query: 409 gtcacgcactgtggctggaactcggtcctcgagagcctctggcatggcgtgccgatggtg 468
|| || ||| | |||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 500 gtgacacacggcggctggaactcggtcctcgagagcctgtggtttggcgtgccgatggca 559
Query: 469 ccatggccgcttggcgccgagcagcactacaacgcgttcacgctggtggccgacatgggc 528
|| |||||||| ||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 560 ccgtggccgctgtacgccgagcagcacctgaacgcgttcacgctggtggcctacatgggc 619
Query: 529 gt 530
||
Sbjct: 620 gt 621
Score = 129 bits (65), Expect = 6e-028
Identities = 128/149 (85%)
Strand = Plus / Plus
Query: 106 gagtgcgtgcgctggctcgactcgcagcctccgagctccgtggtgttcctatgcttcggc 165
|||||||||| ||||||||| ||||||| ||| |||||||||| |||| ||||||||
Sbjct: 197 gagtgcgtgcagtggctcgacacgcagcccccggcctccgtggtgctcctctgcttcggg 256
Query: 166 agcggtggctgcttcacggcgccccaagcgcacgagatagcgcacggcctggaccgcagc 225
||||| || | |||||| ||||| || ||||||||||| |||||||||||||| ||||||
Sbjct: 257 agcggagggttcttcactgcgccacaggcgcacgagatcgcgcacggcctggagcgcagc 316
Query: 226 gggcatcgattcctgtgggtgctgcgcgg 254
|| || || ||||| ||||||||||||||
Sbjct: 317 ggccaccgcttcctctgggtgctgcgcgg 345
Score = 54.0 bits (27), Expect = 3e-005
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 4 gccatcgccgacgggcggtgcacgcgtggtg 34
|||||||||||||||||||||||||| ||||
Sbjct: 95 gccatcgccgacgggcggtgcacgcgcggtg 125
>gb|CD233295.1|CD233295 SS1_13_C04.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_13_C04_A012 3', mRNA sequence
Length = 641
Score = 137 bits (69), Expect = 2e-030
Identities = 195/237 (82%)
Strand = Plus / Plus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
||||||||||||||| || || || ||| |||||||||| |||||||| |||||| | ||
Sbjct: 106 ggcgccgcagaaggacatcctggcgcaccccgccgtgggcggcttcgtgacgcacggcgg 165
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||||||||| || |||||||| ||||| ||||||||| ||||||| ||||||||
Sbjct: 166 atggaactcggtgctggagagcctgtggcacggcgtgccggtggtgccgtggccgctgta 225
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||| ||||||||| |||||| | |||||||||||| |||||||| |||||| ||||
Sbjct: 226 cgcggagcagcacctgaacgcgctggagctggtggccgatatgggcgtggccgtgccgct 285
Query: 543 gaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
|| ||||| |||||| || | || ||||||||||| | ||||| ||||| |||||
Sbjct: 286 caaggtggacaggaagcgggacaacttcgtggaggccgcggagctcgagcgcgcggt 342
Score = 40.1 bits (20), Expect = 0.41
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 664 gccgcgtgccggaaggcaatggaggagggcgg 695
|||| |||||||||||| |||||||||||||
Sbjct: 410 gccgtgtgccggaaggccgtggaggagggcgg 441
>gb|CF427347.1|CF427347 PH1_1_C12.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_1_C12_A002 3', mRNA sequence
Length = 552
Score = 137 bits (69), Expect = 2e-030
Identities = 195/237 (82%)
Strand = Plus / Plus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
||||||||||||||| || || || ||| |||||||||| |||||||| |||||| | ||
Sbjct: 42 ggcgccgcagaaggacatcctggcgcaccccgccgtgggcggcttcgtgacgcacggcgg 101
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||||||||| || |||||||| ||||| ||||||||| ||||||| ||||||||
Sbjct: 102 atggaactcggtgctggagagcctgtggcacggcgtgccggtggtgccgtggccgctgta 161
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||| ||||||||| |||||| | |||||||||||| |||||||| |||||| ||||
Sbjct: 162 cgcggagcagcacctgaacgcgctggagctggtggccgatatgggcgtggccgtgccgct 221
Query: 543 gaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
|| ||||| |||||| || | || ||||||||||| | ||||| ||||| |||||
Sbjct: 222 caaggtggacaggaagcgggacaacttcgtggaggccgcggagctcgagcgcgcggt 278
Score = 40.1 bits (20), Expect = 0.41
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 664 gccgcgtgccggaaggcaatggaggagggcgg 695
|||| |||||||||||| |||||||||||||
Sbjct: 346 gccgtgtgccggaaggccgtggaggagggcgg 377
>gb|CN145147.1|CN145147 WOUND1_27_C09.b2_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_27_C09_A002 3', mRNA sequence
Length = 706
Score = 137 bits (69), Expect = 2e-030
Identities = 195/237 (82%)
Strand = Plus / Plus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
||||||||||||||| || || || ||| |||||||||| |||||||| |||||| | ||
Sbjct: 197 ggcgccgcagaaggacatcctggcgcaccccgccgtgggcggcttcgtgacgcacggcgg 256
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||||||||| || |||||||| ||||| ||||||||| ||||||| ||||||||
Sbjct: 257 atggaactcggtgctggagagcctgtggcacggcgtgccggtggtgccgtggccgctgta 316
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||| ||||||||| |||||| | |||||||||||| |||||||| |||||| ||||
Sbjct: 317 cgcggagcagcacctgaacgcgctggagctggtggccgatatgggcgtggccgtgccgct 376
Query: 543 gaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
|| ||||| |||||| || | || ||||||||||| | ||||| ||||| |||||
Sbjct: 377 caaggtggacaggaagcgggacaacttcgtggaggccgcggagctcgagcgcgcggt 433
Score = 40.1 bits (20), Expect = 0.41
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 664 gccgcgtgccggaaggcaatggaggagggcgg 695
|||| |||||||||||| |||||||||||||
Sbjct: 501 gccgtgtgccggaaggccgtggaggagggcgg 532
>gb|CX619395.1|CX619395 GABR1_45_E08.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_45_E08_A002 3', mRNA sequence
Length = 574
Score = 137 bits (69), Expect = 2e-030
Identities = 195/237 (82%)
Strand = Plus / Plus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
||||||||||||||| || || || ||| |||||||||| |||||||| |||||| | ||
Sbjct: 65 ggcgccgcagaaggacatcctggcgcaccccgccgtgggcggcttcgtgacgcacggcgg 124
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||||||||| || |||||||| ||||| ||||||||| ||||||| ||||||||
Sbjct: 125 atggaactcggtgctggagagcctgtggcacggcgtgccggtggtgccgtggccgctgta 184
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||| ||||||||| |||||| | |||||||||||| |||||||| |||||| ||||
Sbjct: 185 cgcggagcagcacctgaacgcgctggagctggtggccgatatgggcgtggccgtgccgct 244
Query: 543 gaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
|| ||||| |||||| || | || ||||||||||| | ||||| ||||| |||||
Sbjct: 245 caaggtggacaggaagcgggacaacttcgtggaggccgcggagctcgagcgcgcggt 301
Score = 40.1 bits (20), Expect = 0.41
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 664 gccgcgtgccggaaggcaatggaggagggcgg 695
|||| |||||||||||| |||||||||||||
Sbjct: 369 gccgtgtgccggaaggccgtggaggagggcgg 400
>gb|CW183911.1|CW183911 104_600_11164869_116_36681_095 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11164869, DNA
sequence
Length = 563
Score = 129 bits (65), Expect = 6e-028
Identities = 128/149 (85%)
Strand = Plus / Minus
Query: 106 gagtgcgtgcgctggctcgactcgcagcctccgagctccgtggtgttcctatgcttcggc 165
|||||||||| ||||||||| ||||||| ||| |||||||||| |||| ||||||||
Sbjct: 312 gagtgcgtgcagtggctcgacacgcagcccccggcctccgtggtgctcctctgcttcggg 253
Query: 166 agcggtggctgcttcacggcgccccaagcgcacgagatagcgcacggcctggaccgcagc 225
||||| || | |||||| ||||| || ||||||||||| |||||||||||||| ||||||
Sbjct: 252 agcggagggttcttcactgcgccacaggcgcacgagatcgcgcacggcctggagcgcagc 193
Query: 226 gggcatcgattcctgtgggtgctgcgcgg 254
|| || || ||||| ||||||||||||||
Sbjct: 192 ggccaccgcttcctctgggtgctgcgcgg 164
Score = 54.0 bits (27), Expect = 3e-005
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 4 gccatcgccgacgggcggtgcacgcgtggtg 34
|||||||||||||||||||||||||| ||||
Sbjct: 414 gccatcgccgacgggcggtgcacgcgcggtg 384
Score = 52.0 bits (26), Expect = 1e-004
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 349 gtgtggcctaccaaggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttc 408
|||||||| || |||||||| || || |||||||| |||||||||||| |||| || |||
Sbjct: 69 gtgtggccgacgaaggcgccacaaaaagagatactagcccacgccgccatgggtggtttc 10
Query: 409 gt 410
||
Sbjct: 9 gt 8
>gb|CF426997.1|CF426997 PH1_3_C05.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_3_C05_A002 3', mRNA sequence
Length = 640
Score = 129 bits (65), Expect = 6e-028
Identities = 194/237 (81%)
Strand = Plus / Plus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
||||||||||||||| || || || ||| |||||||||| |||||||| |||| | | ||
Sbjct: 129 ggcgccgcagaaggacatcctggcgcaccccgccgtgggcggcttcgtgacgcgcggcgg 188
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||||||||| || |||||||| ||||| ||||||||| ||||||| ||||||||
Sbjct: 189 atggaactcggtgctggagagcctgtggcacggcgtgccggtggtgccgtggccgctgta 248
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||| ||||||||| |||||| | |||||||||||| |||||||| |||||| ||||
Sbjct: 249 cgcggagcagcacctgaacgcgctggagctggtggccgatatgggcgtggccgtgccgct 308
Query: 543 gaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
|| ||||| |||||| || | || ||||||||||| | ||||| ||||| |||||
Sbjct: 309 caaggtggacaggaagcgggacaacttcgtggaggccgcggagctcgagcgcgcggt 365
Score = 40.1 bits (20), Expect = 0.41
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 664 gccgcgtgccggaaggcaatggaggagggcgg 695
|||| |||||||||||| |||||||||||||
Sbjct: 433 gccgtgtgccggaaggccgtggaggagggcgg 464
>gb|CN149641.1|CN149641 WOUND1_64_B10.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_64_B10_A002 3', mRNA sequence
Length = 684
Score = 129 bits (65), Expect = 6e-028
Identities = 194/237 (81%)
Strand = Plus / Plus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
||||||||||||||| || || || ||| || ||||||| |||||||| |||||| | ||
Sbjct: 184 ggcgccgcagaaggacatcctggcgcacccccccgtgggcggcttcgtgacgcacggcgg 243
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||||||||| || |||||||| ||||| ||||||||| ||||||| ||||||||
Sbjct: 244 atggaactcggtgctggagagcctgtggcacggcgtgccggtggtgccgtggccgctgta 303
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||| ||||||||| |||||| | |||||||||||| |||||||| |||||| ||||
Sbjct: 304 cgcggagcagcacctgaacgcgctggagctggtggccgatatgggcgtggccgtgccgct 363
Query: 543 gaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
|| ||||| |||||| || | || ||||||||||| | ||||| ||||| |||||
Sbjct: 364 caaggtggacaggaagcgggacaacttcgtggaggccgcggagctcgagcgcgcggt 420
Score = 40.1 bits (20), Expect = 0.41
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 664 gccgcgtgccggaaggcaatggaggagggcgg 695
|||| |||||||||||| |||||||||||||
Sbjct: 488 gccgtgtgccggaaggccgtggaggagggcgg 519
>gb|CN150564.1|CN150564 WOUND1_70_B11.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_70_B11_A002 3', mRNA sequence
Length = 654
Score = 129 bits (65), Expect = 6e-028
Identities = 194/237 (81%)
Strand = Plus / Plus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
||||||||||||||| || || || ||| |||||||||| |||||||| |||||| | ||
Sbjct: 113 ggcgccgcagaaggacatcctggcgcaccccgccgtgggcggcttcgtgacgcacggcgg 172
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||||||||| || |||| ||| ||||| ||||||||| ||||||| ||||||||
Sbjct: 173 atggaactcggtgctggagaccctgtggcacggcgtgccggtggtgccgtggccgctgta 232
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||| ||||||||| |||||| | |||||||||||| |||||||| |||||| ||||
Sbjct: 233 cgcggagcagcacctgaacgcgctggagctggtggccgatatgggcgtggccgtgccgct 292
Query: 543 gaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
|| ||||| |||||| || | || ||||||||||| | ||||| ||||| |||||
Sbjct: 293 caaggtggacaggaagcgggacaacttcgtggaggccgcggagctcgagcgcgcggt 349
>gb|CW311619.1|CW311619 104_801_11470327_148_36278_028 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11470327, DNA
sequence
Length = 742
Score = 127 bits (64), Expect = 2e-027
Identities = 170/204 (83%), Gaps = 1/204 (0%)
Strand = Plus / Plus
Query: 327 gaggacgaaggatagagggctcgtgtggcctaccaaggcgccgcagaaggagatactcgc 386
|||||| |||| ||||| || |||||||| || |||||||||||||| ||| |||| ||
Sbjct: 540 gaggaccaagggcagaggcctggtgtggccgacgaaggcgccgcagaaagaggtacttgc 599
Query: 387 ccacgccgccgtgggaggcttcgtcacgcactgtggctggaactcggtcctcgagagcct 446
||||||||| |||| || ||||| || ||| | ||||||||||||||||||||||||||
Sbjct: 600 gcacgccgccatgggtggtttcgtgacacacggcggctggaactcggtcctcgagagcct 659
Query: 447 ctggcatggcgtgccgatggtgccatggccgcttggcgccgagcagcactacaacgcgtt 506
||| |||||||| |||| || |||||||| ||||||||||||| ||||||||
Sbjct: 660 gtgggtcggcgtgccaatggcaccgtggccgctgtacgccgagcagcacctgaacgcgtt 719
Query: 507 cacgctggtggccgacatgggcgt 530
||||||||| ||| ||||||||||
Sbjct: 720 cacgctggt-gcctacatgggcgt 742
Score = 123 bits (62), Expect = 4e-026
Identities = 204/251 (81%), Gaps = 3/251 (1%)
Strand = Plus / Plus
Query: 4 gccatcgccgacgggcggtgcacgcgtggtgtcccggcacctccggtgtactcgatcggg 63
||||||||||||||||||||||||| ||||||| || || |||| || | || ||
Sbjct: 220 gccatcgccgacgggcggtgcacgcccggtgtccgtgccccgacggtctatccaattggc 279
Query: 64 ccggtgatcccctccacnccgcccgccgagcagcaggcgcaggagtgcgtgcgctggctc 123
||||||||| | | ||| |||||||| ||| ||| | || ||||||||||| ||||||
Sbjct: 280 ccggtgatctcgttcaccccgcccgctgaggagc---cacacgagtgcgtgcggtggctc 336
Query: 124 gactcgcagcctccgagctccgtggtgttcctatgcttcggcagcggtggctgcttcacg 183
||| ||||||| | |||||||||| |||| |||||||| |||| || | ||||||
Sbjct: 337 gacacgcagccggtggcctccgtggtgctcctctgcttcgggagcgtgggattcttcacc 396
Query: 184 gcgccccaagcgcacgagatagcgcacggcctggaccgcagcgggcatcgattcctgtgg 243
||||| || ||||||||| | |||||||||||||| |||||||| ||||| ||||| |||
Sbjct: 397 gcgccacaggcgcacgagctcgcgcacggcctggagcgcagcggccatcgcttcctctgg 456
Query: 244 gtgctgcgcgg 254
|||||||||||
Sbjct: 457 gtgctgcgcgg 467
>gb|CW326639.1|CW326639 104_822_11478325_116_35967_063 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11478325, DNA
sequence
Length = 477
Score = 127 bits (64), Expect = 2e-027
Identities = 203/249 (81%), Gaps = 3/249 (1%)
Strand = Plus / Plus
Query: 4 gccatcgccgacgggcggtgcacgcgtggtgtcccggcacctccggtgtactcgatcggg 63
||||||||||||||||||||||||| ||||||| || || |||| || | || ||
Sbjct: 232 gccatcgccgacgggcggtgcacgcccggtgtccgtgccccgacggtctatccaattggc 291
Query: 64 ccggtgatcccctccacnccgcccgccgagcagcaggcgcaggagtgcgtgcgctggctc 123
||||||||| | | ||| |||||||| ||| ||| | || ||||||||||| ||||||
Sbjct: 292 ccggtgatctcgttcaccccgcccgctgaggagc---cacacgagtgcgtgcggtggctc 348
Query: 124 gactcgcagcctccgagctccgtggtgttcctatgcttcggcagcggtggctgcttcacg 183
||| ||||||| | |||||||||| |||| |||||||| |||| || | ||||||
Sbjct: 349 gacacgcagccggtggcctccgtggtgctcctctgcttcgggagcgtgggattcttcacc 408
Query: 184 gcgccccaagcgcacgagatagcgcacggcctggaccgcagcgggcatcgattcctgtgg 243
||||| || ||||||||| | |||||||||||||| |||||||||||||| ||||| |||
Sbjct: 409 gcgccacaggcgcacgagctcgcgcacggcctggagcgcagcgggcatcgcttcctctgg 468
Query: 244 gtgctgcgc 252
|||||||||
Sbjct: 469 gtgctgcgc 477
>gb|CW106992.1|CW106992 104_476_11096301_148_34464_081 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11096301, DNA
sequence
Length = 596
Score = 123 bits (62), Expect = 4e-026
Identities = 204/251 (81%), Gaps = 3/251 (1%)
Strand = Plus / Plus
Query: 4 gccatcgccgacgggcggtgcacgcgtggtgtcccggcacctccggtgtactcgatcggg 63
||||||||||||||||||||||||| ||||||| || || |||| || | || ||
Sbjct: 121 gccatcgccgacgggcggtgcacgcccggtgtccgtgccccgacggtctatccaattggc 180
Query: 64 ccggtgatcccctccacnccgcccgccgagcagcaggcgcaggagtgcgtgcgctggctc 123
||||||||| | | ||| |||||||| ||| ||| | || ||||||||||| ||||||
Sbjct: 181 ccggtgatctcgttcaccccgcccgctgaggagc---cacacgagtgcgtgcggtggctc 237
Query: 124 gactcgcagcctccgagctccgtggtgttcctatgcttcggcagcggtggctgcttcacg 183
||| ||||||| | |||||||||| |||| |||||||| |||| || | ||||||
Sbjct: 238 gacacgcagccggtggcctccgtggtgctcctctgcttcgggagcgtgggattcttcacc 297
Query: 184 gcgccccaagcgcacgagatagcgcacggcctggaccgcagcgggcatcgattcctgtgg 243
||||| || ||||||||| | |||||||||||||| |||||||| ||||| ||||| |||
Sbjct: 298 gcgccacaggcgcacgagctcgcgcacggcctggagcgcagcggccatcgcttcctctgg 357
Query: 244 gtgctgcgcgg 254
|||||||||||
Sbjct: 358 gtgctgcgcgg 368
Score = 89.7 bits (45), Expect = 5e-016
Identities = 126/153 (82%)
Strand = Plus / Plus
Query: 327 gaggacgaaggatagagggctcgtgtggcctaccaaggcgccgcagaaggagatactcgc 386
|||||| |||| ||||| || |||||||| || |||||||||||||| ||| |||| ||
Sbjct: 441 gaggaccaagggcagaggcctggtgtggccgacgaaggcgccgcagaaagaggtacttgc 500
Query: 387 ccacgccgccgtgggaggcttcgtcacgcactgtggctggaactcggtcctcgagagcct 446
||||||||| |||| || ||||| || ||| | |||||| |||||||||||||||||||
Sbjct: 501 gcacgccgccatgggtggtttcgtgacacacggcggctgggactcggtcctcgagagcct 560
Query: 447 ctggcatggcgtgccgatggtgccatggccgct 479
||| |||||||| |||| || ||||||||
Sbjct: 561 gtggttcggcgtgcccatggcaccgtggccgct 593
>gb|CW312716.1|CW312716 104_802_11470908_148_35777_036 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11470908, DNA
sequence
Length = 665
Score = 123 bits (62), Expect = 4e-026
Identities = 204/251 (81%), Gaps = 3/251 (1%)
Strand = Plus / Plus
Query: 4 gccatcgccgacgggcggtgcacgcgtggtgtcccggcacctccggtgtactcgatcggg 63
||||||||||||||||||||||||| ||||||| || || |||| || | || ||
Sbjct: 316 gccatcgccgacgggcggtgcacgcccggtgtccgtgccccgacggtctatccaattggc 375
Query: 64 ccggtgatcccctccacnccgcccgccgagcagcaggcgcaggagtgcgtgcgctggctc 123
||||||||| | | ||| |||||||| ||| ||| | || ||||||||||| ||||||
Sbjct: 376 ccggtgatctcgttcaccccgcccgctgaggagc---cacacgagtgcgtgcggtggctc 432
Query: 124 gactcgcagcctccgagctccgtggtgttcctatgcttcggcagcggtggctgcttcacg 183
||| ||||||| | |||||||||| |||| |||||||| |||| || | ||||||
Sbjct: 433 gacacgcagccggtggcctccgtggtgctcctctgcttcgggagcgtgggattcttcacc 492
Query: 184 gcgccccaagcgcacgagatagcgcacggcctggaccgcagcgggcatcgattcctgtgg 243
||||| || ||||||||| | |||||||||||||| |||||||| ||||| ||||| |||
Sbjct: 493 gcgccacaggcgcacgagctcgcgcacggcctggagcgcagcggccatcgcttcctctgg 552
Query: 244 gtgctgcgcgg 254
|||||||||||
Sbjct: 553 gtgctgcgcgg 563
>gb|CL159037.1|CL159037 104_348_10803969_116_31380_177 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10803969, DNA
sequence
Length = 604
Score = 119 bits (60), Expect = 6e-025
Identities = 162/196 (82%)
Strand = Plus / Minus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
||||||||||||||| || |||||| | | ||||| || |||||||| || ||||| ||
Sbjct: 574 ggcgccgcagaaggacatcctcgccagccctgccgtcggcggcttcgtgacccactgcgg 515
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||||||| ||||||||||||| ||||| ||||||||| ||||||| ||||||||
Sbjct: 514 gtggaactcgatcctcgagagcctgtggcacggcgtgccgctggtgccgtggccgctgtt 455
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||| ||||||||| ||||||||| ||| ||| ||| ||||||||||||||||| |
Sbjct: 454 cgcggagcagcacctgaacgcgttcgagctcgtgtccgtgatgggcgtcgccgtggccat 395
Query: 543 gaacgtggaaaggaag 558
||| ||||| ||||||
Sbjct: 394 gaaagtggacaggaag 379
>gb|CL187943.1|CL187943 104_404_10901247_114_32442_064 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10901247, DNA
sequence
Length = 721
Score = 119 bits (60), Expect = 6e-025
Identities = 162/196 (82%)
Strand = Plus / Minus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
||||||||||||||| || |||||| | | ||||| || |||||||| || ||||| ||
Sbjct: 415 ggcgccgcagaaggacatcctcgccagccctgccgtcggcggcttcgtgacccactgcgg 356
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||||||| ||||||||||||| ||||| ||||||||| ||||||| ||||||||
Sbjct: 355 gtggaactcgatcctcgagagcctgtggcacggcgtgccgctggtgccgtggccgctgtt 296
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||| ||||||||| ||||||||| ||| ||| ||| ||||||||||||||||| |
Sbjct: 295 cgcggagcagcacctgaacgcgttcgagctcgtgtccgtgatgggcgtcgccgtggccat 236
Query: 543 gaacgtggaaaggaag 558
||| ||||| ||||||
Sbjct: 235 gaaagtggacaggaag 220
>gb|CL187944.1|CL187944 104_404_10901247_116_32446_064 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10901247, DNA
sequence
Length = 659
Score = 119 bits (60), Expect = 6e-025
Identities = 162/196 (82%)
Strand = Plus / Plus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
||||||||||||||| || |||||| | | ||||| || |||||||| || ||||| ||
Sbjct: 454 ggcgccgcagaaggacatcctcgccagccctgccgtcggcggcttcgtgacccactgcgg 513
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||||||| ||||||||||||| ||||| ||||||||| ||||||| ||||||||
Sbjct: 514 gtggaactcgatcctcgagagcctgtggcacggcgtgccgctggtgccgtggccgctgtt 573
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||| ||||||||| ||||||||| ||| ||| ||| ||||||||||||||||| |
Sbjct: 574 cgcggagcagcacctgaacgcgttcgagctcgtgtccgtgatgggcgtcgccgtggccat 633
Query: 543 gaacgtggaaaggaag 558
||| ||||| ||||||
Sbjct: 634 gaaagtggacaggaag 649
>gb|CW089827.1|CW089827 104_435_10948933_116_32594_057 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10948933, DNA
sequence
Length = 722
Score = 119 bits (60), Expect = 6e-025
Identities = 162/196 (82%)
Strand = Plus / Minus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
||||||||||||||| || |||||| | | ||||| || |||||||| || ||||| ||
Sbjct: 614 ggcgccgcagaaggacatcctcgccagccctgccgtcggcggcttcgtgacccactgcgg 555
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||||||| ||||||||||||| ||||| ||||||||| ||||||| ||||||||
Sbjct: 554 gtggaactcgatcctcgagagcctgtggcacggcgtgccgctggtgccgtggccgctgtt 495
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||| ||||||||| ||||||||| ||| ||| ||| ||||||||||||||||| |
Sbjct: 494 cgcggagcagcacctgaacgcgttcgagctcgtgtccgtgatgggcgtcgccgtggccat 435
Query: 543 gaacgtggaaaggaag 558
||| ||||| ||||||
Sbjct: 434 gaaagtggacaggaag 419
>gb|CW171881.1|CW171881 104_582_11155977_148_36526_033 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11155977, DNA
sequence
Length = 669
Score = 119 bits (60), Expect = 6e-025
Identities = 162/196 (82%)
Strand = Plus / Plus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
||||||||||||||| || |||||| | | ||||| || |||||||| || ||||| ||
Sbjct: 165 ggcgccgcagaaggacatcctcgccagccctgccgtcggcggcttcgtgacccactgcgg 224
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||||||| ||||||||||||| ||||| ||||||||| ||||||| ||||||||
Sbjct: 225 gtggaactcgatcctcgagagcctgtggcacggcgtgccgctggtgccgtggccgctgtt 284
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||| ||||||||| ||||||||| ||| ||| ||| ||||||||||||||||| |
Sbjct: 285 cgcggagcagcacctgaacgcgttcgagctcgtgtccgtgatgggcgtcgccgtggccat 344
Query: 543 gaacgtggaaaggaag 558
||| ||||| ||||||
Sbjct: 345 gaaagtggacaggaag 360
>gb|CW255117.1|CW255117 104_719_11226054_116_35123_021 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11226054, DNA
sequence
Length = 659
Score = 117 bits (59), Expect = 2e-024
Identities = 104/119 (87%)
Strand = Plus / Minus
Query: 375 ggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtggctggaactcggt 434
|||||| |||||||||||||||||||| |||||||| || ||||||||||||||||||||
Sbjct: 443 ggagatcctcgcccacgccgccgtgggtggcttcgttacccactgtggctggaactcggt 384
Query: 435 cctcgagagcctctggcatggcgtgccgatggtgccatggccgcttggcgccgagcagc 493
|| |||||||| ||||| |||||||| |||| ||| |||||| | |||||||||||
Sbjct: 383 gctggagagcctgtggcacggcgtgcccatggcgccgtggccgatgtacgccgagcagc 325
Score = 40.1 bits (20), Expect = 0.41
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 235 ttcctgtgggtgctgcgcgg 254
||||||||||||||||||||
Sbjct: 592 ttcctgtgggtgctgcgcgg 573
>gb|CF433267.1|CF433267 NIT1_26_H04.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_26_H04_A002 3', mRNA sequence
Length = 569
Score = 111 bits (56), Expect = 1e-022
Identities = 195/239 (81%), Gaps = 2/239 (0%)
Strand = Plus / Plus
Query: 363 ggcgccgcagaaggagatactcgc-ccacgccgccgtggga-ggcttcgtcacgcactgt 420
||||||||||||||| || || || | || |||||||||| |||||||| |||||| |
Sbjct: 57 ggcgccgcagaaggacatcctggcgcnaccccgccgtggggcggcttcgtgacgcacggc 116
Query: 421 ggctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgctt 480
|| ||||||||||| || |||||||| ||||| ||||||||| ||||||| ||||||||
Sbjct: 117 ggatggaactcggtgctggagagcctgtggcacggcgtgccggtggtgccgtggccgctg 176
Query: 481 ggcgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcg 540
||| ||||||||| |||||| | |||||||||||| |||||||| |||||| ||
Sbjct: 177 tacgcggagcagcacctgaacgcgctggagctggtggccgatatgggcgtggccgtgccg 236
Query: 541 ctgaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
|| || ||||| |||||| || | || ||||||||||| | ||||| ||||| |||||
Sbjct: 237 ctcaaggtggacaggaagcgggacaacttcgtggaggccgcggagctcgagcgcgcggt 295
Score = 40.1 bits (20), Expect = 0.41
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 664 gccgcgtgccggaaggcaatggaggagggcgg 695
|||| |||||||||||| |||||||||||||
Sbjct: 363 gccgtgtgccggaaggccgtggaggagggcgg 394
>gb|CX623211.1|CX623211 GABR1_68_H03.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_68_H03_A002 3', mRNA sequence
Length = 469
Score = 111 bits (56), Expect = 1e-022
Identities = 170/208 (81%)
Strand = Plus / Plus
Query: 392 ccgccgtgggaggcttcgtcacgcactgtggctggaactcggtcctcgagagcctctggc 451
|||||||||| || ||||| |||||| | || ||||||||||| || |||||||| ||||
Sbjct: 15 ccgccgtgggcggattcgtgacgcacggcggatggaactcggtgctggagagcctgtggc 74
Query: 452 atggcgtgccgatggtgccatggccgcttggcgccgagcagcactacaacgcgttcacgc 511
| ||||||||| ||||||| |||||||| ||| ||||||||| |||||| | ||
Sbjct: 75 acggcgtgccggtggtgccgtggccgctgtacgcggagcagcacctgaacgcgctggagc 134
Query: 512 tggtggccgacatgggcgtcgccgtggcgctgaacgtggaaaggaagaggaagaatttcg 571
|||||||||| |||||||| |||||| |||| || ||||| |||||| || | || ||||
Sbjct: 135 tggtggccgatatgggcgtggccgtgccgctcaaggtggacaggaagcgggacaacttcg 194
Query: 572 tggaggcgaccgagctggagcgagcggt 599
||||||| | ||||| ||||| |||||
Sbjct: 195 tggaggccgcggagctcgagcgcgcggt 222
Score = 40.1 bits (20), Expect = 0.41
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 664 gccgcgtgccggaaggcaatggaggagggcgg 695
|||| |||||||||||| |||||||||||||
Sbjct: 290 gccgtgtgccggaaggccgtggaggagggcgg 321
>gb|CW338051.1|CW338051 104_838_11484537_116_36122_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11484537, DNA
sequence
Length = 642
Score = 109 bits (55), Expect = 5e-022
Identities = 97/111 (87%)
Strand = Plus / Minus
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||| |
Sbjct: 625 cgccgagcagcacctgaacgcgttcgcgctggtggccgccatgggcgtcgccgtggcgat 566
Query: 543 gaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcg 593
| | ||||| ||||||||| | || |||||||||||| | |||||||||||
Sbjct: 565 ggaggtggacaggaagagggacaacttcgtggaggcggcggagctggagcg 515
>gb|CL154940.1|CL154940 104_340_10781755_116_31470_235 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10781755, DNA
sequence
Length = 686
Score = 97.6 bits (49), Expect = 2e-018
Identities = 100/117 (85%)
Strand = Plus / Minus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
||||||||||||||| || |||||| | | ||||| || |||||||| || ||||| ||
Sbjct: 118 ggcgccgcagaaggacatcctcgccagccctgccgtcggcggcttcgtgacccactgcgg 59
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgct 479
||||||||| ||||||||||||| ||||| ||||||||| ||||||| ||||||||
Sbjct: 58 gtggaactcgatcctcgagagcctgtggcacggcgtgccgctggtgccgtggccgct 2
>gb|BZ348795.1|BZ348795 hp61d04.g2 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hp61d04 5', DNA sequence
Length = 346
Score = 89.7 bits (45), Expect = 5e-016
Identities = 114/137 (83%)
Strand = Plus / Minus
Query: 343 gggctcgtgtggcctaccaaggcgccgcagaaggagatactcgcccacgccgccgtggga 402
||||||||||||||| || |||||||||||||||||| || |||||| | ||||| ||
Sbjct: 290 gggctcgtgtggcctgcctgggcgccgcagaaggagatcctggcccacccggccgtcggc 231
Query: 403 ggcttcgtcacgcactgtggctggaactcggtcctcgagagcctctggcatggcgtgccg 462
|||||||| || ||||| || |||||||| |||| |||||||| ||| || ||||||
Sbjct: 230 ggcttcgtgacccactgcggttggaactccatcctggagagcctgtggttcggtgtgccg 171
Query: 463 atggtgccatggccgct 479
||| |||| ||||||||
Sbjct: 170 atgctgccgtggccgct 154
>gb|CW032833.1|CW032833 104_262_10501615_115_30362 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10501615, DNA
sequence
Length = 665
Score = 89.7 bits (45), Expect = 5e-016
Identities = 114/137 (83%)
Strand = Plus / Plus
Query: 343 gggctcgtgtggcctaccaaggcgccgcagaaggagatactcgcccacgccgccgtggga 402
||||||||||||||| || |||||||||||||||||| || |||||| | ||||| ||
Sbjct: 252 gggctcgtgtggcctgcctgggcgccgcagaaggagatcctggcccacccggccgtcggc 311
Query: 403 ggcttcgtcacgcactgtggctggaactcggtcctcgagagcctctggcatggcgtgccg 462
|||||||| || ||||| || |||||||| |||| |||||||| ||| || ||||||
Sbjct: 312 ggcttcgtgacccactgcggttggaactccatcctggagagcctgtggttcggtgtgccg 371
Query: 463 atggtgccatggccgct 479
||| |||| ||||||||
Sbjct: 372 atgctgccgtggccgct 388
>gb|CW093428.1|CW093428 104_456_10999770_148_37471_071 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10999770, DNA
sequence
Length = 641
Score = 89.7 bits (45), Expect = 5e-016
Identities = 114/137 (83%)
Strand = Plus / Minus
Query: 343 gggctcgtgtggcctaccaaggcgccgcagaaggagatactcgcccacgccgccgtggga 402
||||||||||||||| || |||||||||||||||||| || |||||| | ||||| ||
Sbjct: 175 gggctcgtgtggcctgcctgggcgccgcagaaggagatcctggcccacccggccgtcggc 116
Query: 403 ggcttcgtcacgcactgtggctggaactcggtcctcgagagcctctggcatggcgtgccg 462
|||||||| || ||||| || |||||||| |||| |||||||| ||| || ||||||
Sbjct: 115 ggcttcgtgacccactgcggttggaactccatcctggagagcctgtggttcggtgtgccg 56
Query: 463 atggtgccatggccgct 479
||| |||| ||||||||
Sbjct: 55 atgctgccgtggccgct 39
>gb|CW388736.1|CW388736 fsbb001f073k02f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f073k02, DNA
sequence
Length = 549
Score = 83.8 bits (42), Expect = 3e-014
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgt 536
||||||||||||||||||||| |||||||||||||||| |||||| ||||||||
Sbjct: 524 cgccgagcagcactacaacgccttcacgctggtggccggcatgggggtcgccgt 471
>gb|CW491158.1|CW491158 fsbb001f280o13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f280o13, DNA
sequence
Length = 516
Score = 81.8 bits (41), Expect = 1e-013
Identities = 170/213 (79%)
Strand = Plus / Plus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
||||||||||| |||| | || || ||| |||||||| |||||||| |||||||| ||
Sbjct: 292 ggcgccgcagagggaggtcctggctcaccacgccgtggccggcttcgtgacgcactgcgg 351
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||| |||||| ||||| | | ||| ||||||||||||| ||| ||||||||
Sbjct: 352 ctggacctcggtgatcgaggccttgtggtcgggcgtgccgatggcgccgtggccgctgta 411
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||||||||||||| ||||||||| ||| |||||| |||||||||||| || | |
Sbjct: 412 cgccgagcagcacctaaacgcgttcgagctcgtggcctccatgggcgtcgcggtcaggat 471
Query: 543 gaacgtggaaaggaagaggaagaatttcgtgga 575
| ||||||| ||||||||||| ||||| |||||
Sbjct: 472 ggacgtggacaggaagaggaacaattttgtgga 504
Score = 40.1 bits (20), Expect = 0.41
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 210 cggcctggaccgcagcgggcatcgattcctgtgggt 245
|||||| || ||||||||||| || |||||||||||
Sbjct: 136 cggcctcgagcgcagcgggcagcgcttcctgtgggt 171
>gb|CW176402.1|CW176402 104_589_11158468_148_36680_010 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11158468, DNA
sequence
Length = 680
Score = 79.8 bits (40), Expect = 5e-013
Identities = 88/104 (84%)
Strand = Plus / Minus
Query: 343 gggctcgtgtggcctaccaaggcgccgcagaaggagatactcgcccacgccgccgtggga 402
||||||||||||||| || |||||||||||||||||| || |||||| | ||||| ||
Sbjct: 107 gggctcgtgtggcctgcctgggcgccgcagaaggagatcctggcccacccggccgtcggc 48
Query: 403 ggcttcgtcacgcactgtggctggaactcggtcctcgagagcct 446
|||||||| || ||||| || |||||||| |||| ||||||||
Sbjct: 47 ggcttcgtgacccactgcggttggaactccatcctggagagcct 4
>gb|CW491157.1|CW491157 fsbb001f280o13f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f280o13, DNA
sequence
Length = 592
Score = 77.8 bits (39), Expect = 2e-012
Identities = 147/183 (80%)
Strand = Plus / Minus
Query: 393 cgccgtgggaggcttcgtcacgcactgtggctggaactcggtcctcgagagcctctggca 452
|||||||| |||||||| |||||||| ||||||| |||||| ||||| | | |||
Sbjct: 584 cgccgtggccggcttcgtgacgcactgcggctggacctcggtgatcgaggccttgtggtc 525
Query: 453 tggcgtgccgatggtgccatggccgcttggcgccgagcagcactacaacgcgttcacgct 512
||||||||||||| ||| |||||||| ||||||||||||| ||||||||| |||
Sbjct: 524 gggcgtgccgatggcgccgtggccgctgtacgccgagcagcacctaaacgcgttcgagct 465
Query: 513 ggtggccgacatgggcgtcgccgtggcgctgaacgtggaaaggaagaggaagaatttcgt 572
|||||| |||||||||||| || | || ||||||| ||||||||||| ||||| ||
Sbjct: 464 cgtggcctccatgggcgtcgcggtcaggatggacgtggacaggaagaggaacaattttgt 405
Query: 573 gga 575
|||
Sbjct: 404 gga 402
>gb|BE355206.1|BE355206 DG1_10_G03.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 327
Score = 69.9 bits (35), Expect = 5e-010
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 395 ccgtgggaggcttcgtcacgcactgtggctggaactcggtcct 437
||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 77 ccgtgggcggcttcgtcacgcactgcggctggaactcggtcct 119
>gb|BE593270.1|BE593270 WS1_99_F12.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 597
Score = 69.9 bits (35), Expect = 5e-010
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 395 ccgtgggaggcttcgtcacgcactgtggctggaactcggtcct 437
||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 86 ccgtgggcggcttcgtcacgcactgcggctggaactcggtcct 128
>gb|CB925243.1|CB925243 ABA1_32_F05.b1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_32_F05_A012 3', mRNA sequence
Length = 585
Score = 69.9 bits (35), Expect = 5e-010
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 395 ccgtgggaggcttcgtcacgcactgtggctggaactcggtcct 437
||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 42 ccgtgggcggcttcgtcacgcactgcggctggaactcggtcct 84
>gb|CF429042.1|CF429042 PH1_19_F01.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_19_F01_A002 3', mRNA sequence
Length = 569
Score = 69.9 bits (35), Expect = 5e-010
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 395 ccgtgggaggcttcgtcacgcactgtggctggaactcggtcct 437
||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 37 ccgtgggcggcttcgtcacgcactgcggctggaactcggtcct 79
>gb|CN142613.1|CN142613 WOUND1_11_C11.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_11_C11_A002 3', mRNA sequence
Length = 752
Score = 69.9 bits (35), Expect = 5e-010
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 395 ccgtgggaggcttcgtcacgcactgtggctggaactcggtcct 437
||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 139 ccgtgggcggcttcgtcacgcactgcggctggaactcggtcct 181
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 293,294
Number of Sequences: 832831
Number of extensions: 293294
Number of successful extensions: 88649
Number of sequences better than 0.5: 183
Number of HSP's better than 0.5 without gapping: 182
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 88250
Number of HSP's gapped (non-prelim): 376
length of query: 1063
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1043
effective length of database: 474,703,049
effective search space: 495115280107
effective search space used: 495115280107
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)