BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2478343.2.1
(694 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW263776.1|CW263776 104_732_11230904_148_35236_028 Sorgh... 86 5e-015
gb|CW072473.1|CW072473 104_325_10592285_116_30541 Sorghum m... 82 8e-014
gb|CW269433.1|CW269433 104_740_11401840_148_35315_054 Sorgh... 82 8e-014
gb|CW312127.1|CW312127 104_801_11470592_116_36284_018 Sorgh... 82 8e-014
gb|CW312128.1|CW312128 104_801_11470592_148_36283_018 Sorgh... 82 8e-014
gb|CW408967.1|CW408967 fsbb001f103b09k0 Sorghum methylation... 82 8e-014
gb|CW208733.1|CW208733 104_638_11188843_148_36982_074 Sorgh... 74 2e-011
gb|CW239897.1|CW239897 104_698_11217909_148_37505_089 Sorgh... 74 2e-011
gb|CW313572.1|CW313572 104_803_11471355_116_35786_002 Sorgh... 74 2e-011
gb|CW313573.1|CW313573 104_803_11471355_148_35790_002 Sorgh... 74 2e-011
gb|CW496055.1|CW496055 fsbb001f288b11k0 Sorghum methylation... 74 2e-011
gb|CW239896.1|CW239896 104_698_11217909_116_37504_089 Sorgh... 70 3e-010
gb|BZ340250.1|BZ340250 ic37f08.b1 WGS-SbicolorF (JM107 adap... 66 5e-009
gb|CW277776.1|CW277776 104_752_11406206_148_35418_063 Sorgh... 66 5e-009
gb|CW476248.1|CW476248 fsbb001f233a10f0 Sorghum methylation... 66 5e-009
gb|BE595892.1|BE595892 PI1_49_E11.g1_A002 Pathogen induced ... 66 5e-009
gb|BE599295.1|BE599295 PI1_87_G04.g1_A002 Pathogen induced ... 66 5e-009
gb|CB926347.1|CB926347 ABA1_8_G03.b1_A012 Abscisic acid-tre... 66 5e-009
gb|CB926950.1|CB926950 ABA1_11_B02.b1_A012 Abscisic acid-tr... 66 5e-009
gb|CD426207.1|CD426207 SA1_19_E09.b1_A002 Salicylic acid-tr... 66 5e-009
gb|CF073799.1|CF073799 FE1_12_E11.b1_A002 Iron-deficient se... 66 5e-009
gb|CN138029.1|CN138029 OX1_61_F11.b1_A002 Oxidatively-stres... 66 5e-009
gb|BZ348795.1|BZ348795 hp61d04.g2 WGS-SbicolorF (JM107 adap... 60 3e-007
gb|CW024022.1|CW024022 104_164_10434714_1_30002 Sorghum met... 60 3e-007
gb|CW028597.1|CW028597 104_255_10499187_116_30393 Sorghum m... 60 3e-007
gb|CW032833.1|CW032833 104_262_10501615_115_30362 Sorghum m... 60 3e-007
gb|CW069511.1|CW069511 104_319_10525937_1_30093 Sorghum met... 60 3e-007
gb|CW093428.1|CW093428 104_456_10999770_148_37471_071 Sorgh... 60 3e-007
gb|CW176402.1|CW176402 104_589_11158468_148_36680_010 Sorgh... 60 3e-007
gb|CW338052.1|CW338052 104_838_11484537_148_36123_043 Sorgh... 60 3e-007
gb|CW408966.1|CW408966 fsbb001f103b09f0 Sorghum methylation... 60 3e-007
gb|CN138113.1|CN138113 OX1_61_F11.g1_A002 Oxidatively-stres... 60 3e-007
gb|CN141745.1|CN141745 WOUND1_1_C12.g1_A002 Wounded leaves ... 60 3e-007
gb|CN144845.1|CN144845 WOUND1_25_G01.b2_A002 Wounded leaves... 60 3e-007
gb|CL196913.1|CL196913 104_423_10943386_114_32326_039 Sorgh... 58 1e-006
gb|CW056909.1|CW056909 104_298_10517934_114_30156 Sorghum m... 58 1e-006
gb|CW358431.1|CW358431 fsbb001f025j05k0 Sorghum methylation... 58 1e-006
gb|BE355206.1|BE355206 DG1_10_G03.g1_A002 Dark Grown 1 (DG1... 58 1e-006
gb|BE593270.1|BE593270 WS1_99_F12.g1_A002 Water-stressed 1 ... 58 1e-006
gb|CB925243.1|CB925243 ABA1_32_F05.b1_A012 Abscisic acid-tr... 58 1e-006
gb|CF429042.1|CF429042 PH1_19_F01.b1_A002 Phosphorous-defic... 58 1e-006
gb|CN142613.1|CN142613 WOUND1_11_C11.b1_A002 Wounded leaves... 58 1e-006
gb|CW061720.1|CW061720 104_305_10520553_114_30152 Sorghum m... 56 4e-006
gb|CW167896.1|CW167896 104_577_11153849_148_36496_075 Sorgh... 56 4e-006
gb|CW315654.1|CW315654 104_806_11472478_116_35826_083 Sorgh... 56 4e-006
gb|BE363468.1|BE363468 WS1_63_B06.g1_A002 Water-stressed 1 ... 56 4e-006
gb|CX613066.1|CX613066 GABR1_6_C02.b1_A002 GA- or brassinol... 56 4e-006
gb|CW142907.1|CW142907 104_534_11137119_116_34948_056 Sorgh... 54 2e-005
gb|CW142908.1|CW142908 104_534_11137119_148_34944_056 Sorgh... 54 2e-005
gb|CW264925.1|CW264925 104_734_11231579_116_35257_048 Sorgh... 54 2e-005
gb|CW264926.1|CW264926 104_734_11231579_148_35261_048 Sorgh... 54 2e-005
gb|CF486816.1|CF486816 POL1_39_H12.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CL185025.1|CL185025 104_398_10899248_114_32369_020 Sorgh... 52 7e-005
gb|CL190425.1|CL190425 104_408_10906074_116_32504_071 Sorgh... 52 7e-005
gb|CW091182.1|CW091182 104_453_10998407_114_33028_096 Sorgh... 52 7e-005
gb|CW091183.1|CW091183 104_453_10998407_116_33032_096 Sorgh... 52 7e-005
gb|CW187148.1|CW187148 104_605_11166940_116_36720_010 Sorgh... 52 7e-005
gb|CW234267.1|CW234267 104_687_11213889_148_37382_033 Sorgh... 52 7e-005
gb|CW249523.1|CW249523 104_711_11222896_116_35042_058 Sorgh... 52 7e-005
gb|CW249524.1|CW249524 104_711_11222896_148_35046_058 Sorgh... 52 7e-005
gb|CW346601.1|CW346601 fsbb001f006d02f0 Sorghum methylation... 52 7e-005
gb|CW477959.1|CW477959 fsbb001f235j04f0 Sorghum methylation... 52 7e-005
gb|CW370930.1|CW370930 fsbb001f046c06k0 Sorghum methylation... 50 3e-004
gb|BE598113.1|BE598113 PI1_65_H05.b1_A002 Pathogen induced ... 50 3e-004
gb|CB928346.1|CB928346 ABA1_15_C06.b1_A012 Abscisic acid-tr... 50 3e-004
gb|CN146707.1|CN146707 WOUND1_43_E09.b1_A002 Wounded leaves... 50 3e-004
gb|CW023890.1|CW023890 104_164_10434630_1_30002 Sorghum met... 48 0.001
gb|CW034956.1|CW034956 104_265_10502864_114_30378 Sorghum m... 48 0.001
gb|CW035206.1|CW035206 104_265_10503023_114_30378 Sorghum m... 48 0.001
gb|CW120282.1|CW120282 104_497_11109239_148_34644_086 Sorgh... 48 0.001
gb|CW133801.1|CW133801 104_517_11116961_116_34808_067 Sorgh... 48 0.001
gb|CW169998.1|CW169998 104_580_11154972_116_36512_044 Sorgh... 48 0.001
gb|CW214968.1|CW214968 104_647_11194293_148_37162_093 Sorgh... 48 0.001
gb|CW220432.1|CW220432 104_655_11197347_116_37153_014 Sorgh... 48 0.001
gb|CW220433.1|CW220433 104_655_11197347_148_37154_014 Sorgh... 48 0.001
gb|CW288258.1|CW288258 104_766_11411855_148_35535_086 Sorgh... 48 0.001
gb|CW348962.1|CW348962 fsbb001f009j08f0 Sorghum methylation... 48 0.001
gb|CW362367.1|CW362367 fsbb001f033g05f0 Sorghum methylation... 48 0.001
gb|CW365814.1|CW365814 fsbb001f038i09f0 Sorghum methylation... 48 0.001
gb|CW365815.1|CW365815 fsbb001f038i09k0 Sorghum methylation... 48 0.001
gb|CW437515.1|CW437515 fsbb001f154k21f0 Sorghum methylation... 48 0.001
gb|CW465833.1|CW465833 fsbb001f216m09k0 Sorghum methylation... 48 0.001
gb|CW471505.1|CW471505 fsbb001f225h10f0 Sorghum methylation... 48 0.001
gb|CW490836.1|CW490836 fsbb001f280h06f0 Sorghum methylation... 48 0.001
gb|BE356231.1|BE356231 DG1_123_G05.g1_A002 Dark Grown 1 (DG... 48 0.001
gb|BE357034.1|BE357034 DG1_146_G10.b1_A002 Dark Grown 1 (DG... 48 0.001
gb|BE357084.1|BE357084 DG1_146_G10.g1_A002 Dark Grown 1 (DG... 48 0.001
gb|BE357349.1|BE357349 DG1_148_C05.g1_A002 Dark Grown 1 (DG... 48 0.001
gb|BE358440.1|BE358440 DG1_29_G10.g1_A002 Dark Grown 1 (DG1... 48 0.001
gb|BE363621.1|BE363621 WS1_64_B07.g1_A002 Water-stressed 1 ... 48 0.001
gb|BG410775.1|BG410775 EM1_25_F05.g1_A002 Embryo 1 (EM1) So... 48 0.001
gb|BM323424.1|BM323424 PIC1_19_B04.b1_A002 Pathogen-infecte... 48 0.001
gb|BM323694.1|BM323694 PIC1_22_C02.b1_A002 Pathogen-infecte... 48 0.001
gb|CD211873.1|CD211873 HS1_67_C01.b1_A012 Heat-shocked seed... 48 0.001
gb|CD428859.1|CD428859 ETH1_1_C11.b1_A002 Ethylene-treated ... 48 0.001
gb|CN125018.1|CN125018 RHOH1_8_H04.b1_A002 Acid- and alkali... 48 0.001
gb|CX606668.1|CX606668 ANR1_4_G07.b1_A002 Anaerobic roots S... 48 0.001
gb|CX607843.1|CX607843 ANR1_31_C11.b1_A002 Anaerobic roots ... 48 0.001
gb|CX617551.1|CX617551 GABR1_34_H10.b1_A002 GA- or brassino... 48 0.001
gb|AY542311.1| Sorghum bicolor clone SB20O07 b1-1, b1-2, pu... 48 0.001
gb|BZ366101.1|BZ366101 ic94f06.g1 WGS-SbicolorF (JM107 adap... 46 0.004
gb|CW084531.1|CW084531 104_427_10945849_116_32511_009 Sorgh... 46 0.004
gb|CW265845.1|CW265845 104_735_11232105_116_35269_041 Sorgh... 46 0.004
gb|CW270523.1|CW270523 104_742_11402473_116_35332_011 Sorgh... 46 0.004
gb|CW274370.1|CW274370 104_747_11404391_116_35374_092 Sorgh... 46 0.004
gb|CW316549.1|CW316549 104_808_11472951_116_35853_064 Sorgh... 46 0.004
gb|CW388737.1|CW388737 fsbb001f073k02k0 Sorghum methylation... 46 0.004
gb|CD233295.1|CD233295 SS1_13_C04.b1_A012 Salt-stressed see... 46 0.004
gb|CF427347.1|CF427347 PH1_1_C12.b1_A002 Phosphorous-defici... 46 0.004
gb|CN145147.1|CN145147 WOUND1_27_C09.b2_A002 Wounded leaves... 46 0.004
gb|CN150564.1|CN150564 WOUND1_70_B11.b1_A002 Wounded leaves... 46 0.004
gb|CX619395.1|CX619395 GABR1_45_E08.b1_A002 GA- or brassino... 46 0.004
gb|BZ346077.1|BZ346077 ht60d04.b1 WGS-SbicolorF (JM107 adap... 44 0.017
gb|CL154940.1|CL154940 104_340_10781755_116_31470_235 Sorgh... 44 0.017
gb|CL159037.1|CL159037 104_348_10803969_116_31380_177 Sorgh... 44 0.017
gb|CL187943.1|CL187943 104_404_10901247_114_32442_064 Sorgh... 44 0.017
gb|CL187944.1|CL187944 104_404_10901247_116_32446_064 Sorgh... 44 0.017
gb|CW072472.1|CW072472 104_325_10592285_114_30537 Sorghum m... 44 0.017
gb|CW089827.1|CW089827 104_435_10948933_116_32594_057 Sorgh... 44 0.017
gb|CW171881.1|CW171881 104_582_11155977_148_36526_033 Sorgh... 44 0.017
gb|CW233503.1|CW233503 104_686_11213464_116_37376_052 Sorgh... 44 0.017
gb|CW233504.1|CW233504 104_686_11213464_148_37375_052 Sorgh... 44 0.017
gb|CW236611.1|CW236611 104_692_11215707_148_37500_006 Sorgh... 44 0.017
gb|CW255117.1|CW255117 104_719_11226054_116_35123_021 Sorgh... 44 0.017
gb|CW261570.1|CW261570 104_728_11229584_148_35173_020 Sorgh... 44 0.017
gb|CW264170.1|CW264170 104_732_11231134_148_35238_083 Sorgh... 44 0.017
gb|CW277522.1|CW277522 104_751_11406073_148_35415_005 Sorgh... 44 0.017
gb|CW345505.1|CW345505 104_848_11488527_116_36205_054 Sorgh... 44 0.017
gb|CW394220.1|CW394220 fsbb001f081l05k0 Sorghum methylation... 44 0.017
gb|CW467620.1|CW467620 fsbb001f219g07f0 Sorghum methylation... 44 0.017
gb|AW923519.1|AW923519 DG1_52_C12.g1_A002 Dark Grown 1 (DG1... 44 0.017
gb|BE356173.1|BE356173 DG1_123_G05.b1_A002 Dark Grown 1 (DG... 44 0.017
gb|BE363840.1|BE363840 WS1_71_H03.g2_A002 Water-stressed 1 ... 44 0.017
gb|BG241163.1|BG241163 OV1_39_A04.b1_A002 Ovary 1 (OV1) Sor... 44 0.017
gb|BE364586.2|BE364586 PI1_15_G08.g1_A002 Pathogen induced ... 44 0.017
gb|CB927488.1|CB927488 ABA1_26_C09.b1_A012 Abscisic acid-tr... 44 0.017
gb|CX614480.1|CX614480 GABR1_14_G09.b1_A002 GA- or brassino... 44 0.017
gb|CL176130.1|CL176130 104_382_10892918_148_31762_134 Sorgh... 42 0.067
gb|CW041558.1|CW041558 104_275_10506614_115_30285 Sorghum m... 42 0.067
gb|CW063958.1|CW063958 104_309_10522296_114_30136 Sorghum m... 42 0.067
gb|CW063959.1|CW063959 104_309_10522296_115_30140 Sorghum m... 42 0.067
gb|CW090795.1|CW090795 104_436_10949477_114_32604_017 Sorgh... 42 0.067
gb|CW200287.1|CW200287 104_625_11183983_148_36862_020 Sorgh... 42 0.067
gb|CW404738.1|CW404738 fsbb001f097a06f0 Sorghum methylation... 42 0.067
gb|CW404739.1|CW404739 fsbb001f097a06k0 Sorghum methylation... 42 0.067
gb|CW449893.1|CW449893 fsbb001f188e03k0 Sorghum methylation... 42 0.067
gb|CW472599.1|CW472599 fsbb001f227j19k0 Sorghum methylation... 42 0.067
gb|AW679257.1|AW679257 WS1_23_F01.g1_A002 Water-stressed 1 ... 42 0.067
gb|BE359082.1|BE359082 DG1_38_F04.g1_A002 Dark Grown 1 (DG1... 42 0.067
gb|BE359974.1|BE359974 DG1_60_C01.g2_A002 Dark Grown 1 (DG1... 42 0.067
gb|CB926451.1|CB926451 ABA1_9_A08.b1_A012 Abscisic acid-tre... 42 0.067
gb|CB928358.1|CB928358 ABA1_15_H11.b1_A012 Abscisic acid-tr... 42 0.067
gb|CD212039.1|CD212039 HS1_68_G01.b1_A012 Heat-shocked seed... 42 0.067
gb|CD227847.1|CD227847 CCC1_56_A04.b1_A007 Callus culture/c... 42 0.067
gb|CD429410.1|CD429410 ETH1_4_G04.b1_A002 Ethylene-treated ... 42 0.067
gb|CN126572.1|CN126572 RHOH1_18_A06.b1_A002 Acid- and alkal... 42 0.067
gb|CN144834.1|CN144834 WOUND1_25_E11.b2_A002 Wounded leaves... 42 0.067
gb|CX606448.1|CX606448 ANR1_3_C08.b1_A002 Anaerobic roots S... 42 0.067
gb|CX613398.1|CX613398 GABR1_8_A03.b1_A002 GA- or brassinol... 42 0.067
gb|CX621626.1|CX621626 GABR1_59_E11.b1_A002 GA- or brassino... 42 0.067
gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence 42 0.067
gb|CL160733.1|CL160733 104_351_10805196_114_31824_252 Sorgh... 40 0.26
gb|CL190115.1|CL190115 104_408_10905855_116_32501_064 Sorgh... 40 0.26
gb|CW192204.1|CW192204 104_614_11178899_148_36948_040 Sorgh... 40 0.26
gb|CW277521.1|CW277521 104_751_11406073_116_35411_005 Sorgh... 40 0.26
gb|CW312636.1|CW312636 104_802_11470866_116_35781_069 Sorgh... 40 0.26
gb|CW451594.1|CW451594 fsbb001f191l18k0 Sorghum methylation... 40 0.26
gb|BG241630.1|BG241630 RHIZ2_17_H10.g1_A003 Rhizome2 (RHIZ2... 40 0.26
gb|BG464496.1|BG464496 EM1_70_E02.g1_A002 Embryo 1 (EM1) So... 40 0.26
gb|CD228503.1|CD228503 CCC1_8_D11.b1_A007 Callus culture/ce... 40 0.26
gb|CF426997.1|CF426997 PH1_3_C05.b1_A002 Phosphorous-defici... 40 0.26
>gb|CW263776.1|CW263776 104_732_11230904_148_35236_028 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11230904, DNA
sequence
Length = 637
Score = 85.7 bits (43), Expect = 5e-015
Identities = 79/91 (86%)
Strand = Plus / Minus
Query: 604 catgggcacgccctccgacacggcctccacggtggagttccagccgcagtgggtgaagaa 663
||||||||||||| || ||||| ||||| | |||||||||||||||||||||||| |||
Sbjct: 513 catgggcacgcccgcccacacgctctccaggatggagttccagccgcagtgggtgaggaa 454
Query: 664 gccgcccacggccgggtgcgcgagcacctcc 694
|||||| ||||| | ||| | ||||||||||
Sbjct: 453 gccgccgacggcggcgtgggagagcacctcc 423
>gb|CW072473.1|CW072473 104_325_10592285_116_30541 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10592285, DNA
sequence
Length = 697
Score = 81.8 bits (41), Expect = 8e-014
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 626 gcctccacggtggagttccagccgcagtgggtgaagaagccgcccacggccgggtgcgcg 685
||||||| ||||||||||||||||||||||| | ||||| ||||||||||||||||||
Sbjct: 600 gcctccagcgtggagttccagccgcagtgggtcacgaagcagcccacggccgggtgcgcc 659
Query: 686 agcac 690
|||||
Sbjct: 660 agcac 664
>gb|CW269433.1|CW269433 104_740_11401840_148_35315_054 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11401840, DNA
sequence
Length = 617
Score = 81.8 bits (41), Expect = 8e-014
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 626 gcctccacggtggagttccagccgcagtgggtgaagaagccgcccacggccgggtgcgcg 685
||||||| ||||||||||||||||||||||| | ||||| ||||||||||||||||||
Sbjct: 440 gcctccagcgtggagttccagccgcagtgggtcacgaagcagcccacggccgggtgcgcc 381
Query: 686 agcac 690
|||||
Sbjct: 380 agcac 376
>gb|CW312127.1|CW312127 104_801_11470592_116_36284_018 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11470592, DNA
sequence
Length = 643
Score = 81.8 bits (41), Expect = 8e-014
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 626 gcctccacggtggagttccagccgcagtgggtgaagaagccgcccacggccgggtgcgcg 685
||||||| ||||||||||||||||||||||| | ||||| ||||||||||||||||||
Sbjct: 510 gcctccagcgtggagttccagccgcagtgggtcacgaagcagcccacggccgggtgcgcc 451
Query: 686 agcac 690
|||||
Sbjct: 450 agcac 446
>gb|CW312128.1|CW312128 104_801_11470592_148_36283_018 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11470592, DNA
sequence
Length = 678
Score = 81.8 bits (41), Expect = 8e-014
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 626 gcctccacggtggagttccagccgcagtgggtgaagaagccgcccacggccgggtgcgcg 685
||||||| ||||||||||||||||||||||| | ||||| ||||||||||||||||||
Sbjct: 563 gcctccagcgtggagttccagccgcagtgggtcacgaagcagcccacggccgggtgcgcc 622
Query: 686 agcac 690
|||||
Sbjct: 623 agcac 627
>gb|CW408967.1|CW408967 fsbb001f103b09k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f103b09, DNA
sequence
Length = 609
Score = 81.8 bits (41), Expect = 8e-014
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 626 gcctccacggtggagttccagccgcagtgggtgaagaagccgcccacggccgggtgcgcg 685
||||||| ||||||||||||||||||||||| | ||||| ||||||||||||||||||
Sbjct: 606 gcctccagcgtggagttccagccgcagtgggtcacgaagcagcccacggccgggtgcgcc 547
Query: 686 agcac 690
|||||
Sbjct: 546 agcac 542
>gb|CW208733.1|CW208733 104_638_11188843_148_36982_074 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11188843, DNA
sequence
Length = 663
Score = 73.8 bits (37), Expect = 2e-011
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 626 gcctccacggtggagttccagccgcagtgggtgaagaagccgcccacggccgggtgcgcg 685
|||||||| || ||||||||||||||||| |||||||||| ||| ||||| ||||||||
Sbjct: 161 gcctccaccgtcgagttccagccgcagtgcgtgaagaagcagccgacggcggggtgcgct 220
Query: 686 agcacctcc 694
|| ||||||
Sbjct: 221 aggacctcc 229
>gb|CW239897.1|CW239897 104_698_11217909_148_37505_089 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11217909, DNA
sequence
Length = 565
Score = 73.8 bits (37), Expect = 2e-011
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 626 gcctccacggtggagttccagccgcagtgggtgaagaagccgcccacggccgggtgcgcg 685
|||||||| || ||||||||||||||||| |||||||||| ||| ||||| ||||||||
Sbjct: 438 gcctccaccgtcgagttccagccgcagtgcgtgaagaagcagccgacggcggggtgcgct 379
Query: 686 agcacctcc 694
|| ||||||
Sbjct: 378 aggacctcc 370
>gb|CW313572.1|CW313572 104_803_11471355_116_35786_002 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11471355, DNA
sequence
Length = 692
Score = 73.8 bits (37), Expect = 2e-011
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 626 gcctccacggtggagttccagccgcagtgggtgaagaagccgcccacggccgggtgcgcg 685
|||||||| || ||||||||||||||||| |||||||||| ||| ||||| ||||||||
Sbjct: 517 gcctccaccgtcgagttccagccgcagtgcgtgaagaagcagccgacggcggggtgcgct 576
Query: 686 agcacctcc 694
|| ||||||
Sbjct: 577 aggacctcc 585
>gb|CW313573.1|CW313573 104_803_11471355_148_35790_002 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11471355, DNA
sequence
Length = 650
Score = 73.8 bits (37), Expect = 2e-011
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 626 gcctccacggtggagttccagccgcagtgggtgaagaagccgcccacggccgggtgcgcg 685
|||||||| || ||||||||||||||||| |||||||||| ||| ||||| ||||||||
Sbjct: 563 gcctccaccgtcgagttccagccgcagtgcgtgaagaagcagccgacggcggggtgcgct 504
Query: 686 agcacctcc 694
|| ||||||
Sbjct: 503 aggacctcc 495
>gb|CW496055.1|CW496055 fsbb001f288b11k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f288b11, DNA
sequence
Length = 555
Score = 73.8 bits (37), Expect = 2e-011
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 626 gcctccacggtggagttccagccgcagtgggtgaagaagccgcccacggccgggtgcgcg 685
|||||||| || ||||||||||||||||| |||||||||| ||| ||||| ||||||||
Sbjct: 259 gcctccaccgtcgagttccagccgcagtgcgtgaagaagcagccgacggcggggtgcgct 318
Query: 686 agcacctcc 694
|| ||||||
Sbjct: 319 aggacctcc 327
>gb|CW239896.1|CW239896 104_698_11217909_116_37504_089 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11217909, DNA
sequence
Length = 692
Score = 69.9 bits (35), Expect = 3e-010
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 626 gcctccacggtggagttccagccgcagtgggtgaagaagccgcccacggccgggtgcgc 684
|||||||| || ||||||||||||||||| |||||||||| ||| ||||| ||||||||
Sbjct: 550 gcctccaccgtcgagttccagccgcagtgcgtgaagaagcagccgacggcggggtgcgc 608
>gb|BZ340250.1|BZ340250 ic37f08.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ic37f08 5', DNA sequence
Length = 602
Score = 65.9 bits (33), Expect = 5e-009
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 626 gcctccacggtggagttccagccgcagtgggtgaagaagccgcccacggccgggtgcgcg 685
|||||| |||||||||||||||||||||| || | ||||| |||||||| |||||||
Sbjct: 363 gcctccgcggtggagttccagccgcagtgcgtcaggaagcaccccacggcgcggtgcgcc 422
Query: 686 agcacctcc 694
|||||||||
Sbjct: 423 agcacctcc 431
>gb|CW277776.1|CW277776 104_752_11406206_148_35418_063 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11406206, DNA
sequence
Length = 403
Score = 65.9 bits (33), Expect = 5e-009
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 635 gtggagttccagccgcagtgggtgaagaagccgcccacggccgggtgcg 683
||||||||||| |||||||| |||| ||||| |||||||||||||||||
Sbjct: 359 gtggagttccacccgcagtgcgtgacgaagcagcccacggccgggtgcg 311
>gb|CW476248.1|CW476248 fsbb001f233a10f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f233a10, DNA
sequence
Length = 150
Score = 65.9 bits (33), Expect = 5e-009
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 626 gcctccacggtggagttccagccgcagtgggtgaagaagccgcccacggccgggtgcgcg 685
|||||| |||||||||||||||||||||| || | ||||| |||||||| |||||||
Sbjct: 26 gcctccgcggtggagttccagccgcagtgcgtcaggaagcaccccacggcgcggtgcgcc 85
Query: 686 agcacctcc 694
|||||||||
Sbjct: 86 agcacctcc 94
>gb|BE595892.1|BE595892 PI1_49_E11.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 607
Score = 65.9 bits (33), Expect = 5e-009
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 604 catgggcacgccctccgacacggcctccacggtggagttccagccgcagtgggtgaagaa 663
||||||||||||| || ||||| ||||| | |||||||||||||||||||||||| |||
Sbjct: 61 catgggcacgcccgcccacacgctctccaggatggagttccagccgcagtgggtgaggaa 2
Query: 664 g 664
|
Sbjct: 1 g 1
>gb|BE599295.1|BE599295 PI1_87_G04.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 614
Score = 65.9 bits (33), Expect = 5e-009
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 626 gcctccacggtggagttccagccgcagtgggtgaagaagccgcccacggccgggtgcgcg 685
|||||| |||||||||||||||||||||| || | ||||| |||||||| |||||||
Sbjct: 181 gcctccgcggtggagttccagccgcagtgcgtcaggaagcaccccacggcgcggtgcgcc 122
Query: 686 agcacctcc 694
|||||||||
Sbjct: 121 agcacctcc 113
>gb|CB926347.1|CB926347 ABA1_8_G03.b1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_8_G03_A012 3', mRNA sequence
Length = 602
Score = 65.9 bits (33), Expect = 5e-009
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 635 gtggagttccagccgcagtgggtgaagaagccgcccacggccgggtgcg 683
||||||||||| |||||||| |||| ||||| |||||||||||||||||
Sbjct: 161 gtggagttccacccgcagtgcgtgacgaagcagcccacggccgggtgcg 113
>gb|CB926950.1|CB926950 ABA1_11_B02.b1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_11_B02_A012 3', mRNA sequence
Length = 531
Score = 65.9 bits (33), Expect = 5e-009
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 635 gtggagttccagccgcagtgggtgaagaagccgcccacggccgggtgcg 683
||||||||||| |||||||| |||| ||||| |||||||||||||||||
Sbjct: 86 gtggagttccacccgcagtgcgtgacgaagcagcccacggccgggtgcg 38
>gb|CD426207.1|CD426207 SA1_19_E09.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_19_E09_A002 3', mRNA sequence
Length = 620
Score = 65.9 bits (33), Expect = 5e-009
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 635 gtggagttccagccgcagtgggtgaagaagccgcccacggccgggtgcg 683
||||||||||| |||||||| |||| ||||| |||||||||||||||||
Sbjct: 102 gtggagttccacccgcagtgcgtgacgaagcagcccacggccgggtgcg 54
>gb|CF073799.1|CF073799 FE1_12_E11.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_12_E11_A002 3', mRNA sequence
Length = 596
Score = 65.9 bits (33), Expect = 5e-009
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 635 gtggagttccagccgcagtgggtgaagaagccgcccacggccgggtgcg 683
||||||||||| |||||||| |||| ||||| |||||||||||||||||
Sbjct: 139 gtggagttccacccgcagtgcgtgacgaagcagcccacggccgggtgcg 91
>gb|CN138029.1|CN138029 OX1_61_F11.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_61_F11_A002 3', mRNA sequence
Length = 711
Score = 65.9 bits (33), Expect = 5e-009
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 635 gtggagttccagccgcagtgggtgaagaagccgcccacggccgggtgcg 683
||||||||||| |||||||| |||| ||||| |||||||||||||||||
Sbjct: 193 gtggagttccacccgcagtgcgtgacgaagcagcccacggccgggtgcg 145
>gb|BZ348795.1|BZ348795 hp61d04.g2 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hp61d04 5', DNA sequence
Length = 346
Score = 60.0 bits (30), Expect = 3e-007
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 636 tggagttccagccgcagtgggtgaagaagccgcccacggccgggtg 681
|||||||||| ||||||||||| | ||||||||| |||||||||||
Sbjct: 200 tggagttccaaccgcagtgggtcacgaagccgccgacggccgggtg 245
>gb|CW024022.1|CW024022 104_164_10434714_1_30002 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10434714, DNA
sequence
Length = 430
Score = 60.0 bits (30), Expect = 3e-007
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 638 gagttccagccgcagtgggtgaagaagccgcccacggccgggtgcgcgagcacc 691
|||||||| ||||||||||| | |||||||||||||||| ||||| |||||||
Sbjct: 235 gagttccacccgcagtgggtcacgaagccgcccacggccccgtgcgagagcacc 182
>gb|CW028597.1|CW028597 104_255_10499187_116_30393 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10499187, DNA
sequence
Length = 836
Score = 60.0 bits (30), Expect = 3e-007
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 625 ggcctccacggtggagttccagccgcagtgggtgaagaagccgcccacggccgggtgcgc 684
||||||||| ||||||||||||||||||| || |||| || ||||| |||||||||||
Sbjct: 544 ggcctccaccatggagttccagccgcagtgcgtccagaacccacccaccgccgggtgcgc 603
Query: 685 gagcacctcc 694
|| ||||||
Sbjct: 604 caggacctcc 613
>gb|CW032833.1|CW032833 104_262_10501615_115_30362 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10501615, DNA
sequence
Length = 665
Score = 60.0 bits (30), Expect = 3e-007
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 636 tggagttccagccgcagtgggtgaagaagccgcccacggccgggtg 681
|||||||||| ||||||||||| | ||||||||| |||||||||||
Sbjct: 342 tggagttccaaccgcagtgggtcacgaagccgccgacggccgggtg 297
>gb|CW069511.1|CW069511 104_319_10525937_1_30093 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10525937, DNA
sequence
Length = 609
Score = 60.0 bits (30), Expect = 3e-007
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 638 gagttccagccgcagtgggtgaagaagccgcccacggccgggtgcgcgag 687
|||||||| |||||||| || | ||||||||||||||||| |||||||||
Sbjct: 380 gagttccacccgcagtgcgtcacgaagccgcccacggccgcgtgcgcgag 429
>gb|CW093428.1|CW093428 104_456_10999770_148_37471_071 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10999770, DNA
sequence
Length = 641
Score = 60.0 bits (30), Expect = 3e-007
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 636 tggagttccagccgcagtgggtgaagaagccgcccacggccgggtg 681
|||||||||| ||||||||||| | ||||||||| |||||||||||
Sbjct: 85 tggagttccaaccgcagtgggtcacgaagccgccgacggccgggtg 130
>gb|CW176402.1|CW176402 104_589_11158468_148_36680_010 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11158468, DNA
sequence
Length = 680
Score = 60.0 bits (30), Expect = 3e-007
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 636 tggagttccagccgcagtgggtgaagaagccgcccacggccgggtg 681
|||||||||| ||||||||||| | ||||||||| |||||||||||
Sbjct: 17 tggagttccaaccgcagtgggtcacgaagccgccgacggccgggtg 62
>gb|CW338052.1|CW338052 104_838_11484537_148_36123_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11484537, DNA
sequence
Length = 673
Score = 60.0 bits (30), Expect = 3e-007
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 638 gagttccagccgcagtgggtgaagaagccgcccacggccgggtgcgcgag 687
|||||||| |||||||| || | ||||||||||||||||| |||||||||
Sbjct: 63 gagttccacccgcagtgcgtcacgaagccgcccacggccgcgtgcgcgag 14
>gb|CW408966.1|CW408966 fsbb001f103b09f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f103b09, DNA
sequence
Length = 713
Score = 60.0 bits (30), Expect = 3e-007
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 626 gcctccacggtggagttccagccgcagtgggtgaagaagccgcccacggccggg 679
||||||| ||||||||||||||||||||||| | ||||| |||||||| ||||
Sbjct: 660 gcctccagcgtggagttccagccgcagtgggtcacgaagcagcccacgggcggg 713
>gb|CN138113.1|CN138113 OX1_61_F11.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_61_F11_A002 5', mRNA sequence
Length = 877
Score = 60.0 bits (30), Expect = 3e-007
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 638 gagttccagccgcagtgggtgaagaagccgcccacggccgggtgcg 683
|||||||| |||||||| |||| ||||| |||||||||||||||||
Sbjct: 877 gagttccacccgcagtgcgtgacgaagcagcccacggccgggtgcg 832
>gb|CN141745.1|CN141745 WOUND1_1_C12.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_1_C12_A002 5', mRNA sequence
Length = 667
Score = 60.0 bits (30), Expect = 3e-007
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 638 gagttccagccgcagtgggtgaagaagccgcccacggccgggtgcgcgagcacc 691
|||||||| ||||||||||| | |||||||||||||||| ||||| |||||||
Sbjct: 330 gagttccacccgcagtgggtcacgaagccgcccacggccccgtgcgagagcacc 383
>gb|CN144845.1|CN144845 WOUND1_25_G01.b2_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_25_G01_A002 3', mRNA sequence
Length = 671
Score = 60.0 bits (30), Expect = 3e-007
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 638 gagttccagccgcagtgggtgaagaagccgcccacggccgggtgcgcgagcacc 691
|||||||| ||||||||||| | |||||||||||||||| ||||| |||||||
Sbjct: 102 gagttccacccgcagtgggtcacgaagccgcccacggccccgtgcgagagcacc 49
>gb|CL196913.1|CL196913 104_423_10943386_114_32326_039 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10943386, DNA
sequence
Length = 650
Score = 58.0 bits (29), Expect = 1e-006
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 623 acggcctccacggtggagttccagccgcagtgggtga 659
|||||||||| |||||||||||||||||||||||||
Sbjct: 73 acggcctccagcgtggagttccagccgcagtgggtga 109
>gb|CW056909.1|CW056909 104_298_10517934_114_30156 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10517934, DNA
sequence
Length = 520
Score = 58.0 bits (29), Expect = 1e-006
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 623 acggcctccacggtggagttccagccgcagtgggtga 659
|||||||||| |||||||||||||||||||||||||
Sbjct: 331 acggcctccagcgtggagttccagccgcagtgggtga 367
>gb|CW358431.1|CW358431 fsbb001f025j05k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f025j05, DNA
sequence
Length = 607
Score = 58.0 bits (29), Expect = 1e-006
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 638 gagttccagccgcagtgggtgaagaagccgcccacggccgggtgcgcgagcac 690
|||||||||||||||||| | | |||||| ||||| ||||||||||| |||||
Sbjct: 448 gagttccagccgcagtggctcacgaagcctcccaccgccgggtgcgccagcac 500
>gb|BE355206.1|BE355206 DG1_10_G03.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 327
Score = 58.0 bits (29), Expect = 1e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 638 gagttccagccgcagtgggtgaagaagccgcccacgg 674
||||||||||||||||| |||| ||||||||||||||
Sbjct: 113 gagttccagccgcagtgcgtgacgaagccgcccacgg 77
>gb|BE593270.1|BE593270 WS1_99_F12.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 597
Score = 58.0 bits (29), Expect = 1e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 638 gagttccagccgcagtgggtgaagaagccgcccacgg 674
||||||||||||||||| |||| ||||||||||||||
Sbjct: 122 gagttccagccgcagtgcgtgacgaagccgcccacgg 86
>gb|CB925243.1|CB925243 ABA1_32_F05.b1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_32_F05_A012 3', mRNA sequence
Length = 585
Score = 58.0 bits (29), Expect = 1e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 638 gagttccagccgcagtgggtgaagaagccgcccacgg 674
||||||||||||||||| |||| ||||||||||||||
Sbjct: 78 gagttccagccgcagtgcgtgacgaagccgcccacgg 42
>gb|CF429042.1|CF429042 PH1_19_F01.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_19_F01_A002 3', mRNA sequence
Length = 569
Score = 58.0 bits (29), Expect = 1e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 638 gagttccagccgcagtgggtgaagaagccgcccacgg 674
||||||||||||||||| |||| ||||||||||||||
Sbjct: 73 gagttccagccgcagtgcgtgacgaagccgcccacgg 37
>gb|CN142613.1|CN142613 WOUND1_11_C11.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_11_C11_A002 3', mRNA sequence
Length = 752
Score = 58.0 bits (29), Expect = 1e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 638 gagttccagccgcagtgggtgaagaagccgcccacgg 674
||||||||||||||||| |||| ||||||||||||||
Sbjct: 175 gagttccagccgcagtgcgtgacgaagccgcccacgg 139
>gb|CW061720.1|CW061720 104_305_10520553_114_30152 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10520553, DNA
sequence
Length = 571
Score = 56.0 bits (28), Expect = 4e-006
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 637 ggagttccagccgcagtgggtgaagaagccgcccacggccgggtgcgcgagcacct 692
||||||||||||||||||||||| ||| |||||| ||| | |||||| |||||||
Sbjct: 445 ggagttccagccgcagtgggtgaggaacccgcccgtggcggcgtgcgccagcacct 390
>gb|CW167896.1|CW167896 104_577_11153849_148_36496_075 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11153849, DNA
sequence
Length = 609
Score = 56.0 bits (28), Expect = 4e-006
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 637 ggagttccagccgcagtgggtgaagaagccgcccacggccgggtgcgcgagcacct 692
||||||||||||||||||||||| ||| |||||| ||| | |||||| |||||||
Sbjct: 381 ggagttccagccgcagtgggtgaggaacccgcccgtggcggcgtgcgccagcacct 326
>gb|CW315654.1|CW315654 104_806_11472478_116_35826_083 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11472478, DNA
sequence
Length = 572
Score = 56.0 bits (28), Expect = 4e-006
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 637 ggagttccagccgcagtgggtgaagaagccgcccacggccgggtgcgcgagcacct 692
||||||||||||||||||||||| ||| |||||| ||| | |||||| |||||||
Sbjct: 480 ggagttccagccgcagtgggtgaggaacccgcccgtggcggcgtgcgccagcacct 425
>gb|BE363468.1|BE363468 WS1_63_B06.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 493
Score = 56.0 bits (28), Expect = 4e-006
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 637 ggagttccagccgcagtgggtgaagaagccgcccacggccgggtgcgcgagcacct 692
||||||||||||||||||||||| ||| |||||| ||| | |||||| |||||||
Sbjct: 68 ggagttccagccgcagtgggtgaggaacccgcccgtggcggcgtgcgccagcacct 13
>gb|CX613066.1|CX613066 GABR1_6_C02.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_6_C02_A002 3', mRNA sequence
Length = 748
Score = 56.0 bits (28), Expect = 4e-006
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 637 ggagttccagccgcagtgggtgaagaagccgcccacggccgggtgcgcgagcacct 692
||||||||||||||||||||||| ||| |||||| ||| | |||||| |||||||
Sbjct: 161 ggagttccagccgcagtgggtgaggaacccgcccgtggcggcgtgcgccagcacct 106
>gb|CW142907.1|CW142907 104_534_11137119_116_34948_056 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11137119, DNA
sequence
Length = 599
Score = 54.0 bits (27), Expect = 2e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 638 gagttccagccgcagtgggtgaagaagccgcccac 672
||||||||||||||||| |||| ||||||||||||
Sbjct: 478 gagttccagccgcagtgcgtgacgaagccgcccac 512
>gb|CW142908.1|CW142908 104_534_11137119_148_34944_056 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11137119, DNA
sequence
Length = 611
Score = 54.0 bits (27), Expect = 2e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 638 gagttccagccgcagtgggtgaagaagccgcccac 672
||||||||||||||||| |||| ||||||||||||
Sbjct: 591 gagttccagccgcagtgcgtgacgaagccgcccac 557
>gb|CW264925.1|CW264925 104_734_11231579_116_35257_048 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11231579, DNA
sequence
Length = 645
Score = 54.0 bits (27), Expect = 2e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 638 gagttccagccgcagtgggtgaagaagccgcccac 672
||||||||||||||||| |||| ||||||||||||
Sbjct: 534 gagttccagccgcagtgcgtgacgaagccgcccac 568
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 183,663
Number of Sequences: 832831
Number of extensions: 183663
Number of successful extensions: 52641
Number of sequences better than 0.5: 171
Number of HSP's better than 0.5 without gapping: 167
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 52371
Number of HSP's gapped (non-prelim): 270
length of query: 694
length of database: 491,359,669
effective HSP length: 20
effective length of query: 674
effective length of database: 474,703,049
effective search space: 319949855026
effective search space used: 319949855026
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)