BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2455940.2.1
(1115 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN138077.1|CN138077 OX1_61_C04.g1_A002 Oxidatively-stres... 1174 0.0
gb|CN127238.1|CN127238 RHOH1_21_G07.g3_A002 Acid- and alkal... 1136 0.0
gb|CF428636.1|CF428636 PH1_9_G09.g1_A002 Phosphorous-defici... 1049 0.0
gb|CF479933.1|CF479933 POL1_62_E11.g1_A002 Pollen Sorghum b... 985 0.0
gb|CN123933.1|CN123933 RHOH1_1_D01.g1_A002 Acid- and alkali... 957 0.0
gb|CF433879.1|CF433879 NIT1_30_C03.g1_A002 Nitrogen-deficie... 948 0.0
gb|CD229208.1|CD229208 CCC1_13_F11.g1_A007 Callus culture/c... 892 0.0
gb|BE125749.1|BE125749 DG1_55_H11.b1_A002 Dark Grown 1 (DG1... 833 0.0
gb|BG559195.1|BG559195 RHIZ2_55_G08.g1_A003 Rhizome2 (RHIZ2... 827 0.0
gb|CD429608.1|CD429608 ETH1_14_C02.g1_A002 Ethylene-treated... 821 0.0
gb|CF432761.1|CF432761 NIT1_18_G06.g1_A002 Nitrogen-deficie... 821 0.0
gb|BI141003.1|BI141003 IP1_41_H11.b1_A002 Immature pannicle... 813 0.0
gb|BI140992.1|BI140992 IP1_41_G12.b1_A002 Immature pannicle... 809 0.0
gb|CF427278.1|CF427278 PH1_4_H04.g1_A002 Phosphorous-defici... 809 0.0
gb|CN135765.1|CN135765 OX1_38_G08.g1_A002 Oxidatively-stres... 793 0.0
gb|BE360219.1|BE360219 DG1_62_C12.b1_A002 Dark Grown 1 (DG1... 791 0.0
gb|CN127149.1|CN127149 RHOH1_21_G07.b1_A002 Acid- and alkal... 783 0.0
gb|CD428979.1|CD428979 ETH1_1_A03.g1_A002 Ethylene-treated ... 781 0.0
gb|CF480279.1|CF480279 POL1_64_F12.g1_A002 Pollen Sorghum b... 769 0.0
gb|CN137990.1|CN137990 OX1_61_C04.b1_A002 Oxidatively-stres... 763 0.0
gb|CN128942.1|CN128942 RHOH1_32_C05.g1_A002 Acid- and alkal... 757 0.0
gb|BG356843.1|BG356843 OV2_10_F11.g1_A002 Ovary 2 (OV2) Sor... 755 0.0
gb|CN133810.1|CN133810 OX1_18_A10.g1_A002 Oxidatively-stres... 728 0.0
gb|CN128863.1|CN128863 RHOH1_32_C05.b1_A002 Acid- and alkal... 718 0.0
gb|BG357173.1|BG357173 OV2_10_F11.b1_A002 Ovary 2 (OV2) Sor... 698 0.0
gb|BI076233.1|BI076233 IP1_27_E07.b1_A002 Immature pannicle... 682 0.0
gb|CD429550.1|CD429550 ETH1_14_C02.b1_A002 Ethylene-treated... 680 0.0
gb|CF432632.1|CF432632 NIT1_18_G06.b1_A002 Nitrogen-deficie... 674 0.0
gb|BG465738.1|BG465738 RHIZ2_48_A08.b1_A003 Rhizome2 (RHIZ2... 670 0.0
gb|CF427166.1|CF427166 PH1_4_H04.b1_A002 Phosphorous-defici... 638 0.0
gb|BE360322.1|BE360322 DG1_62_C12.g1_A002 Dark Grown 1 (DG1... 624 e-177
gb|CN132666.1|CN132666 OX1_7_B07.g1_A002 Oxidatively-stress... 605 e-171
gb|BG947952.1|BG947952 IP1_7_E07.b1_A002 Immature pannicle ... 567 e-160
gb|CW265394.1|CW265394 104_734_11231851_148_35263_070 Sorgh... 545 e-153
gb|BE360918.1|BE360918 DG1_67_F09.g1_A002 Dark Grown 1 (DG1... 541 e-152
gb|CD229128.1|CD229128 CCC1_13_F11.b1_A007 Callus culture/c... 541 e-152
gb|BG559522.1|BG559522 RHIZ2_55_G08.b1_A003 Rhizome2 (RHIZ2... 517 e-145
gb|BE363151.1|BE363151 DG1_9_E08.g1_A002 Dark Grown 1 (DG1)... 478 e-133
gb|AW282821.1|AW282821 LG1_305_H12.g1_A002 Light Grown 1 (L... 462 e-128
gb|BG466056.1|BG466056 RHIZ2_48_A08.g1_A003 Rhizome2 (RHIZ2... 460 e-127
gb|BI098963.1|BI098963 IP1_35_E08.b1_A002 Immature pannicle... 450 e-124
gb|BE358306.1|BE358306 DG1_27_D04.b2_A002 Dark Grown 1 (DG1... 438 e-121
gb|BI099425.1|BI099425 IP1_41_H11.g1_A002 Immature pannicle... 424 e-117
gb|BI351083.1|BI351083 IP1_69_F01.g1_A002 Immature pannicle... 410 e-112
gb|CD229877.1|CD229877 CCC1_20_D09.g1_A007 Callus culture/c... 408 e-112
gb|BI098677.1|BI098677 IP1_35_E08.g1_A002 Immature pannicle... 355 6e-096
gb|BG104126.1|BG104126 RHIZ2_40_H02.b1_A003 Rhizome2 (RHIZ2... 323 2e-086
gb|BE360832.1|BE360832 DG1_67_F09.b2_A002 Dark Grown 1 (DG1... 313 2e-083
gb|BE363067.1|BE363067 DG1_9_E08.b1_A002 Dark Grown 1 (DG1)... 313 2e-083
gb|CW265397.1|CW265397 104_734_11231853_148_35263_085 Sorgh... 291 7e-077
gb|CW122781.1|CW122781 104_501_11110857_148_34673_033 Sorgh... 266 4e-069
gb|CW265393.1|CW265393 104_734_11231851_116_35259_070 Sorgh... 266 4e-069
gb|CW265595.1|CW265595 104_735_11231967_148_35265_064 Sorgh... 266 4e-069
gb|CW268100.1|CW268100 104_738_11401097_148_35299_069 Sorgh... 266 4e-069
gb|CW411486.1|CW411486 fsbb001f106k20f0 Sorghum methylation... 234 1e-059
gb|CN132579.1|CN132579 OX1_7_B07.b1_A002 Oxidatively-stress... 226 3e-057
gb|BI099415.1|BI099415 IP1_41_G12.g1_A002 Immature pannicle... 178 7e-043
gb|BI076240.1|BI076240 IP1_27_F07.b1_A002 Immature pannicle... 167 3e-039
gb|CW265594.1|CW265594 104_735_11231967_116_35269_064 Sorgh... 159 7e-037
gb|CW122780.1|CW122780 104_501_11110857_116_34677_033 Sorgh... 153 4e-035
gb|CW268099.1|CW268099 104_738_11401097_116_35303_069 Sorgh... 153 4e-035
gb|CX609214.1|CX609214 ANR1_11_G12.b1_A002 Anaerobic roots ... 133 4e-029
gb|CX609300.1|CX609300 ANR1_11_G12.g1_A002 Anaerobic roots ... 133 4e-029
gb|BI351290.1|BI351290 IP1_69_F01.b1_A002 Immature pannicle... 101 1e-019
gb|BG102197.1|BG102197 RHIZ2_22_A05.b1_A003 Rhizome2 (RHIZ2... 78 2e-012
gb|CW249841.1|CW249841 104_711_11223062_116_35044_051 Sorgh... 74 3e-011
gb|BZ628759.1|BZ628759 ih62b02.g1 WGS-SbicolorF (DH5a methy... 72 1e-010
gb|CW180236.1|CW180236 104_594_11160530_116_36635_003 Sorgh... 72 1e-010
gb|CW318948.1|CW318948 104_811_11474228_116_35879_074 Sorgh... 72 1e-010
gb|CW318949.1|CW318949 104_811_11474228_148_35883_074 Sorgh... 72 1e-010
gb|AW676905.1|AW676905 DG1_2_H03.b1_A002 Dark Grown 1 (DG1)... 72 1e-010
gb|AW676996.1|AW676996 DG1_3_D03.b1_A002 Dark Grown 1 (DG1)... 72 1e-010
gb|BE356694.1|BE356694 DG1_12_D07.b1_A002 Dark Grown 1 (DG1... 72 1e-010
gb|BG557547.1|BG557547 EM1_54_G11.b1_A002 Embryo 1 (EM1) So... 72 1e-010
gb|BG560168.1|BG560168 RHIZ2_71_B07.b1_A003 Rhizome2 (RHIZ2... 72 1e-010
gb|BE362957.2|BE362957 DG1_92_G01.b1_A002 Dark Grown 1 (DG1... 72 1e-010
gb|CD236225.1|CD236225 SS1_32_B09.g1_A012 Salt-stressed see... 72 1e-010
gb|CD429497.1|CD429497 ETH1_4_H03.g1_A002 Ethylene-treated ... 72 1e-010
gb|CD430207.1|CD430207 ETH1_17_H03.g1_A002 Ethylene-treated... 72 1e-010
gb|CD462624.1|CD462624 ETH1_38_E02.g1_A002 Ethylene-treated... 72 1e-010
gb|CF429208.1|CF429208 PH1_20_C03.g1_A002 Phosphorous-defic... 72 1e-010
gb|CF431071.1|CF431071 NIT1_4_G11.g1_A002 Nitrogen-deficien... 72 1e-010
gb|CF432712.1|CF432712 NIT1_18_A03.g1_A002 Nitrogen-deficie... 72 1e-010
gb|CN137489.1|CN137489 OX1_57_D04.g1_A002 Oxidatively-stres... 72 1e-010
gb|CN146340.1|CN146340 WOUND1_39_D11.g1_A002 Wounded leaves... 72 1e-010
gb|CX612853.1|CX612853 GABR1_4_G09.g1_A002 GA- or brassinol... 72 1e-010
gb|CW124219.1|CW124219 104_503_11111651_148_34693_034 Sorgh... 70 5e-010
gb|CN146262.1|CN146262 WOUND1_39_D11.b1_A002 Wounded leaves... 68 2e-009
gb|CW277062.1|CW277062 104_751_11405822_116_35410_063 Sorgh... 66 7e-009
gb|AW676989.1|AW676989 DG1_3_F03.b1_A002 Dark Grown 1 (DG1)... 66 7e-009
gb|CF428098.1|CF428098 PH1_12_A02.g1_A002 Phosphorous-defic... 66 7e-009
gb|BG559253.1|BG559253 RHIZ2_52_E08.b1_A003 Rhizome2 (RHIZ2... 64 3e-008
gb|BG559406.1|BG559406 RHIZ2_54_D10.b1_A003 Rhizome2 (RHIZ2... 64 3e-008
gb|CD430220.1|CD430220 ETH1_17_C09.g1_A002 Ethylene-treated... 64 3e-008
gb|CW247562.1|CW247562 104_708_11221843_116_35017_070 Sorgh... 62 1e-007
gb|CW463139.1|CW463139 fsbb001f211j12f0 Sorghum methylation... 62 1e-007
gb|BZ628758.1|BZ628758 ih62b02.b1 WGS-SbicolorF (DH5a methy... 60 5e-007
gb|CL177459.1|CL177459 104_384_10893845_116_31916_293 Sorgh... 60 5e-007
gb|CW180237.1|CW180237 104_594_11160530_148_36631_003 Sorgh... 60 5e-007
gb|CW184571.1|CW184571 104_600_11165220_116_36688_034 Sorgh... 60 5e-007
gb|CW463140.1|CW463140 fsbb001f211j12k0 Sorghum methylation... 60 5e-007
gb|AW923175.1|AW923175 DG1_49_A09.g1_A002 Dark Grown 1 (DG1... 60 5e-007
gb|BE353027.1|BE353027 DG1_2_H03.g1_A002 Dark Grown 1 (DG1)... 60 5e-007
gb|BE356814.1|BE356814 DG1_12_D07.g1_A002 Dark Grown 1 (DG1... 60 5e-007
gb|BG101966.1|BG101966 RHIZ2_22_A05.g1_A003 Rhizome2 (RHIZ2... 60 5e-007
gb|BG103195.1|BG103195 RHIZ2_19_D03.g1_A003 Rhizome2 (RHIZ2... 60 5e-007
gb|BG103368.1|BG103368 RHIZ2_19_D03.b1_A003 Rhizome2 (RHIZ2... 60 5e-007
gb|BG103788.1|BG103788 RHIZ2_40_H02.g1_A003 Rhizome2 (RHIZ2... 60 5e-007
gb|BG241494.1|BG241494 RHIZ2_50_A05.g1_A003 Rhizome2 (RHIZ2... 60 5e-007
gb|BG557655.1|BG557655 EM1_54_G11.g1_A002 Embryo 1 (EM1) So... 60 5e-007
gb|BG558935.1|BG558935 RHIZ2_52_E08.g1_A003 Rhizome2 (RHIZ2... 60 5e-007
gb|BG559614.1|BG559614 RHIZ2_71_B07.g1_A003 Rhizome2 (RHIZ2... 60 5e-007
gb|BE363001.2|BE363001 DG1_92_G01.g1_A002 Dark Grown 1 (DG1... 60 5e-007
gb|CD236128.1|CD236128 SS1_32_B09.b1_A012 Salt-stressed see... 60 5e-007
gb|CX612764.1|CX612764 GABR1_4_G09.b1_A002 GA- or brassinol... 60 5e-007
gb|BE357168.1|BE357168 DG1_147_F02.b1_A002 Dark Grown 1 (DG... 58 2e-006
gb|BG947962.1|BG947962 IP1_7_F07.b1_A002 Immature pannicle ... 58 2e-006
gb|BE361185.1|BE361185 DG1_70_D12.b1_A002 Dark Grown 1 (DG1... 54 3e-005
gb|BE361254.1|BE361254 DG1_70_D12.g1_A002 Dark Grown 1 (DG1... 54 3e-005
gb|BG557877.1|BG557877 EM1_55_F11.b1_A002 Embryo 1 (EM1) So... 54 3e-005
gb|BG559082.1|BG559082 RHIZ2_54_D10.g1_A003 Rhizome2 (RHIZ2... 52 1e-004
gb|CD236365.1|CD236365 SS1_33_B09.g1_A012 Salt-stressed see... 52 1e-004
gb|CW249842.1|CW249842 104_711_11223062_148_35048_051 Sorgh... 48 0.002
gb|CN133728.1|CN133728 OX1_18_A10.b1_A002 Oxidatively-stres... 48 0.002
gb|CW226769.1|CW226769 104_664_11205061_148_37220_049 Sorgh... 44 0.027
gb|CW350779.1|CW350779 fsbb001f012e04f0 Sorghum methylation... 44 0.027
gb|CW350780.1|CW350780 fsbb001f012e04k0 Sorghum methylation... 44 0.027
gb|AW923123.1|AW923123 DG1_49_A09.b1_A002 Dark Grown 1 (DG1... 44 0.027
gb|BI211751.1|BI211751 IP1_27_E07.g1_A002 Immature pannicle... 44 0.027
gb|CD462503.1|CD462503 ETH1_38_E02.b1_A002 Ethylene-treated... 44 0.027
gb|CF433764.1|CF433764 NIT1_30_C03.b1_A002 Nitrogen-deficie... 44 0.027
gb|CL176460.1|CL176460 104_382_10893131_148_31762_347 Sorgh... 42 0.11
gb|CW159844.1|CW159844 104_566_11149571_148_36427_046 Sorgh... 42 0.11
gb|CW249391.1|CW249391 104_711_11222818_148_35048_045 Sorgh... 42 0.11
gb|CW297657.1|CW297657 104_779_11462157_116_35638_081 Sorgh... 42 0.11
gb|CW297658.1|CW297658 104_779_11462157_148_35642_081 Sorgh... 42 0.11
gb|CW463535.1|CW463535 fsbb001f212d14k0 Sorghum methylation... 42 0.11
gb|CW463983.1|CW463983 fsbb001f212p12k0 Sorghum methylation... 42 0.11
gb|CD227771.1|CD227771 CCC1_53_G07.g1_A007 Callus culture/c... 42 0.11
gb|BZ330705.1|BZ330705 hv95b10.g1 WGS-SbicolorF (JM107 adap... 40 0.43
gb|CW096753.1|CW096753 104_462_11002071_116_34350_056 Sorgh... 40 0.43
gb|CW100075.1|CW100075 104_467_11003905_116_34388_009 Sorgh... 40 0.43
gb|CW141897.1|CW141897 104_533_11136557_116_34938_031 Sorgh... 40 0.43
gb|CW223968.1|CW223968 104_660_11203197_116_37197_095 Sorgh... 40 0.43
gb|CW237487.1|CW237487 104_693_11216197_148_37517_049 Sorgh... 40 0.43
gb|CW397171.1|CW397171 fsbb001f085p03f0 Sorghum methylation... 40 0.43
gb|CW411265.1|CW411265 fsbb001f106f23k0 Sorghum methylation... 40 0.43
gb|CW420259.1|CW420259 fsbb001f126h23k0 Sorghum methylation... 40 0.43
gb|AI723924.1|AI723924 RHIZ1_32_G01.y1_A001 Rhizome1 (RHIZ1... 40 0.43
gb|AI724142.1|AI724142 RHIZ1_7_D03.y2_A001 Rhizome1 (RHIZ1)... 40 0.43
gb|AI724518.1|AI724518 RHIZ1_37_C08.y1_A001 Rhizome1 (RHIZ1... 40 0.43
gb|AI724521.1|AI724521 RHIZ1_37_D03.y1_A001 Rhizome1 (RHIZ1... 40 0.43
gb|AI724533.1|AI724533 RHIZ1_37_F05.y1_A001 Rhizome1 (RHIZ1... 40 0.43
gb|AI724573.1|AI724573 RHIZ1_5_E05.y2_A001 Rhizome1 (RHIZ1)... 40 0.43
gb|AW677749.1|AW677749 WS1_10_C02.g1_A002 Water-stressed 1 ... 40 0.43
gb|BE595450.1|BE595450 PI1_55_F08.b1_A002 Pathogen induced ... 40 0.43
gb|BF421240.1|BF421240 FM1_7_C06.g1_A003 Floral-Induced Mer... 40 0.43
gb|BF421267.1|BF421267 FM1_7_F01.g1_A003 Floral-Induced Mer... 40 0.43
gb|BF421601.1|BF421601 FM1_10_A03.g1_A003 Floral-Induced Me... 40 0.43
gb|BF480782.1|BF480782 FM1_14_H06.g1_A003 Floral-Induced Me... 40 0.43
gb|BF585701.1|BF585701 FM1_24_F01.g1_A003 Floral-Induced Me... 40 0.43
gb|BF656296.1|BF656296 FM1_44_F07.g1_A003 Floral-Induced Me... 40 0.43
gb|BF656639.1|BF656639 FM1_52_G09.g1_A003 Floral-Induced Me... 40 0.43
gb|BF705489.1|BF705489 RHIZ2_4_F06.g1_A003 Rhizome2 (RHIZ2)... 40 0.43
gb|BG051987.1|BG051987 RHIZ2_7_E05.g1_A003 Rhizome2 (RHIZ2)... 40 0.43
gb|BG052571.1|BG052571 RHIZ2_25_B07.g1_A003 Rhizome2 (RHIZ2... 40 0.43
gb|BG052756.1|BG052756 RHIZ2_14_D08.g1_A003 Rhizome2 (RHIZ2... 40 0.43
gb|BG052996.1|BG052996 RHIZ2_16_B02.g1_A003 Rhizome2 (RHIZ2... 40 0.43
gb|BG053567.1|BG053567 RHIZ2_10_H03.g1_A003 Rhizome2 (RHIZ2... 40 0.43
gb|BG101978.1|BG101978 RHIZ2_22_B09.g1_A003 Rhizome2 (RHIZ2... 40 0.43
gb|BG101829.1|BG101829 RHIZ2_22_H12.g1_A003 Rhizome2 (RHIZ2... 40 0.43
gb|BG102054.1|BG102054 RHIZ2_24_C06.g1_A003 Rhizome2 (RHIZ2... 40 0.43
gb|BG103479.1|BG103479 RHIZ2_37_B02.g1_A003 Rhizome2 (RHIZ2... 40 0.43
gb|BG103553.1|BG103553 RHIZ2_37_H10.g1_A003 Rhizome2 (RHIZ2... 40 0.43
gb|BG103626.1|BG103626 RHIZ2_38_H05.g1_A003 Rhizome2 (RHIZ2... 40 0.43
gb|BG103644.1|BG103644 RHIZ2_39_A12.g1_A003 Rhizome2 (RHIZ2... 40 0.43
gb|BG158609.1|BG158609 RHIZ2_42_G01.g1_A003 Rhizome2 (RHIZ2... 40 0.43
gb|BG158624.1|BG158624 RHIZ2_42_H09.g1_A003 Rhizome2 (RHIZ2... 40 0.43
gb|BG241529.1|BG241529 RHIZ2_50_F02.g1_A003 Rhizome2 (RHIZ2... 40 0.43
gb|BG241344.1|BG241344 RHIZ2_50_H05.g1_A003 Rhizome2 (RHIZ2... 40 0.43
gb|BG466009.1|BG466009 RHIZ2_47_D09.g1_A003 Rhizome2 (RHIZ2... 40 0.43
gb|BG487512.1|BG487512 EM1_65_H12.b1_A002 Embryo 1 (EM1) So... 40 0.43
gb|BG558634.1|BG558634 RHIZ2_58_D05.g1_A003 Rhizome2 (RHIZ2... 40 0.43
gb|BG558997.1|BG558997 RHIZ2_53_C10.g1_A003 Rhizome2 (RHIZ2... 40 0.43
gb|BG559009.1|BG559009 RHIZ2_53_D10.g1_A003 Rhizome2 (RHIZ2... 40 0.43
gb|BG559173.1|BG559173 RHIZ2_55_E08.g1_A003 Rhizome2 (RHIZ2... 40 0.43
gb|BG559599.1|BG559599 RHIZ2_69_G03.g1_A003 Rhizome2 (RHIZ2... 40 0.43
gb|BG560757.1|BG560757 RHIZ2_64_F03.g1_A003 Rhizome2 (RHIZ2... 40 0.43
gb|BG947663.1|BG947663 IP1_7_E07.g1_A002 Immature pannicle ... 40 0.43
gb|BG947917.1|BG947917 IP1_7_A07.b1_A002 Immature pannicle ... 40 0.43
gb|BI076022.1|BI076022 IP1_24_D04.b1_A002 Immature pannicle... 40 0.43
gb|BI076200.1|BI076200 IP1_27_A07.b1_A002 Immature pannicle... 40 0.43
gb|BI211332.1|BI211332 IP1_59_D06.b1_A002 Immature pannicle... 40 0.43
gb|BI211390.1|BI211390 IP1_60_B06.b1_A002 Immature pannicle... 40 0.43
gb|CD205599.1|CD205599 HS1_15_C02.b1_A012 Heat-shocked seed... 40 0.43
gb|CD207283.1|CD207283 HS1_62_E03.g1_A012 Heat-shocked seed... 40 0.43
gb|CD207957.1|CD207957 HS1_36_H10.b1_A012 Heat-shocked seed... 40 0.43
gb|CD209126.1|CD209126 HS1_46_E02.b1_A012 Heat-shocked seed... 40 0.43
gb|CD209383.1|CD209383 HS1_42_E08.b1_A012 Heat-shocked seed... 40 0.43
gb|CD209961.1|CD209961 HS1_56_E11.b1_A012 Heat-shocked seed... 40 0.43
gb|CD210694.1|CD210694 HS1_49_E01.b1_A012 Heat-shocked seed... 40 0.43
gb|CD220000.1|CD220000 CCC1_60_E05.b1_A007 Callus culture/c... 40 0.43
gb|CD222929.1|CD222929 CCC1_25_B05.b1_A007 Callus culture/c... 40 0.43
gb|CD223513.1|CD223513 CCC1_28_A07.g1_A007 Callus culture/c... 40 0.43
gb|CD227077.1|CD227077 CCC1_4_C03.b1_A007 Callus culture/ce... 40 0.43
gb|CD228482.1|CD228482 CCC1_8_D04.b1_A007 Callus culture/ce... 40 0.43
gb|CD230253.1|CD230253 SS1_42_H05.b1_A012 Salt-stressed see... 40 0.43
gb|CD233126.1|CD233126 SS1_12_D07.b1_A012 Salt-stressed see... 40 0.43
gb|CD234199.1|CD234199 SS1_26_B05.b1_A012 Salt-stressed see... 40 0.43
gb|CD424652.1|CD424652 SA1_8_F11.g1_A002 Salicylic acid-tre... 40 0.43
gb|CF072106.1|CF072106 FE1_20_H04.g2_A002 Iron-deficient se... 40 0.43
gb|CF431087.1|CF431087 NIT1_4_A11.g1_A002 Nitrogen-deficien... 40 0.43
gb|CF487286.1|CF487286 POL1_42_H01.g1_A002 Pollen Sorghum b... 40 0.43
gb|DN552517.1|DN552517 pSHR-RT-A-H1_B06_C108 pSHR Sorghum h... 40 0.43
>gb|CN138077.1|CN138077 OX1_61_C04.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_61_C04_A002 5', mRNA sequence
Length = 809
Score = 1174 bits (592), Expect = 0.0
Identities = 677/705 (96%), Gaps = 9/705 (1%)
Strand = Plus / Minus
Query: 343 cgagcacgaagtcgcggtagaagcggatgtacttgcgcatgggcgcgtcgtcggggagca 402
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 809 cgagcacgaagtcgcggtagaagcggatgtacttgcgcatgggggcgtcgtcggggagca 750
Query: 403 cgacggagccgttccacagcgtgttgtcgtagccgatgaggccgcccagcttcaccagct 462
|||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 749 cgacagagccgttccacagcgtgttgtcgtagccgatgaggccccccagcttcaccagct 690
Query: 463 tcagcagccgctcgtggtagttgaggtagttgtccttgtcggcgtccacgaagacgaagt 522
| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 tgagcagccggtcgtggtagttgaggtagttgtccttgtcggcgtccacgaagacgaagt 630
Query: 523 cgaacgacccgtggttcttctcctccgcgatgaggtcgtcgaggacggggagcgcgggac 582
|||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |
Sbjct: 629 cgaacgacccgtggttcttctcgtcggcgatgaggtcgtcgaggacggggagcgcggggc 570
Query: 583 cctcgcggaagtcgatcttgtgggcgacgccggccttctcgatgcagggcaggcccagct 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 cctcgcggaagtcgatcttgtgggcgacgccggccttctcgatgcagggcaggcccagct 510
Query: 643 cgtagttctcgcggttgatgtccatggccaagatcgtgccgtcctccgggagggcgagcg 702
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 509 cgtagttctcgcggttgatgtccatggccaagatcgtgccgtcctccgggagagcgagcg 450
Query: 703 ccgtggcgaggagggagtagccggtgtagacgccgatctccatggtcttcttggcgccga 762
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 cggtggcgaggagggagtagccggtgtagacgccgatctccatggtcttcttggcgccga 390
Query: 763 tgagcttgatgagcatgttcaggaactgcccctcgtcggcggaggtcgtcatcaggttcc 822
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tgagcttgatgagcatgttgaggaactgcccctcgtcggcggaggtcgtcatcaggttcc 330
Query: 823 atgggtgcttggcggtgatctcgcggagctccttcatgctctccggctcccgcgggtaca 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 atgggtgcttggcggtgatctcgcggagctccttcatgctctccggctcccgcgggtaca 270
Query: 883 cgctcgtgtccaggatgtactggtagaggtcgtcgctcttgagcaggctcttgtggccga 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 269 cgctcgtgtccaggatgtactggtagaggtcgtcgctcttgagcaggctcttgtgtccga 210
Query: 943 cctcggagtgccgcgtcttctgctcgc------cgttgccgttggcctgctgctcctgcg 996
|||||||||| |||||||||||||||| |||||||||||||||||| | || |||
Sbjct: 209 cctcggagtggcgcgtcttctgctcgccgttggcgttgccgttggcctgctccgccggcg 150
Query: 997 ccggc---gccgcctcggtcgccgtggtggccattgcgtgcagtg 1038
| | | |||||||||||||||||||||||||||||| ||||||
Sbjct: 149 cggccttggccgcctcggtcgccgtggtggccattgcgggcagtg 105
>gb|CN127238.1|CN127238 RHOH1_21_G07.g3_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_21_G07_A002 5', mRNA sequence
Length = 859
Score = 1136 bits (573), Expect = 0.0
Identities = 663/693 (95%), Gaps = 9/693 (1%)
Strand = Plus / Minus
Query: 355 cgcggtagaagcggatgtacttgcgcatgggcgcgtcgtcggggagcacgacggagccgt 414
||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 791 cgcggtagaagcggatgtacttgcgcatgggggcgtcgtcggggagcacgacagagccgt 732
Query: 415 tccacagcgtgttgtcgtagccgatgaggccgcccagcttcaccagcttcagcagccgct 474
||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |
Sbjct: 731 tccacagcgtgttgtcgtagccgatgaggccccccagcttcaccagcttgagcagccggt 672
Query: 475 cgtggtagttgaggtagttgtccttgtcggcgtccacgaagacgaagtcgaacgacccgt 534
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 671 cgtggtagttgaggtagttgtcctngtcggcgtccacgaagacgaagtcgaacgacccgt 612
Query: 535 ggttcttctcctccgcgatgaggtcgtcgaggacggggagcgcgggaccctcgcggaagt 594
||| |||||| || |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 611 ggtccttctcgtcggcgatgaggtcgtcgaggacggggagcgcggggccctcgcggaagt 552
Query: 595 cgatcttgtgggcgacgccggccttctcgatgcagggcaggcccagctcgtagttctcgc 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 cgatcttgtgggcgacgccggccttctcgatgcagggcaggcccagctcgtagttctcgc 492
Query: 655 ggttgatgtccatggccaagatcgtgccgtcctccgggagggcgagcgccgtggcgagga 714
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 491 ggttgatgtccatggccaagatcgtgccgtcctccgggagagcgagcgcggtggcgagga 432
Query: 715 gggagtagccggtgtagacgccgatctccatggtcttcttggcgccgatgagcttgatga 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gggagtagccggtgtagacgccgatctccatggtcttcttggcgccgatgagcttgatga 372
Query: 775 gcatgttcaggaactgcccctcgtcggcggaggtcgtcatcaggttccatgggtgcttgg 834
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gcatgttgaggaactgcccctcgtcggcggaggtcgtcatcaggttccatgggtgcttgg 312
Query: 835 cggtgatctcgcggagctccttcatgctctccggctcccgcgggtacacgctcgtgtcca 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 cggtgatctcgcggagctccttcatgctctccggctcccgcgggtacacgctcgtgtcca 252
Query: 895 ggatgtactggtagaggtcgtcgctcttgagcaggctcttgtggccgacctcggagtgcc 954
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 251 ggatgtactggtagaggtcgtcgctcttgagcaggctcttgtgtccgacctcggagtggc 192
Query: 955 gcgtcttctgctcgc------cgttgccgttggcctgctgctcctgcgccggc---gccg 1005
||||||||||||||| |||||||||||||||||| | || |||| | | ||||
Sbjct: 191 gcgtcttctgctcgccgttggcgttgccgttggcctgctccgccggcgcggccttggccg 132
Query: 1006 cctcggtcgccgtggtggccattgcgtgcagtg 1038
|||||||||||||||||||||||||| ||||||
Sbjct: 131 cctcggtcgccgtggtggccattgcgggcagtg 99
Score = 135 bits (68), Expect = 1e-029
Identities = 68/68 (100%)
Strand = Plus / Minus
Query: 248 ttttcacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctc 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853 ttttcacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctc 794
Query: 308 gacgcggt 315
||||||||
Sbjct: 793 gacgcggt 786
>gb|CF428636.1|CF428636 PH1_9_G09.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_9_G09_A002 5', mRNA sequence
Length = 756
Score = 1049 bits (529), Expect = 0.0
Identities = 620/649 (95%), Gaps = 10/649 (1%)
Strand = Plus / Minus
Query: 400 gcacgacggagccgttccacagcgtgttgtcgtagccgatgaggccgcccagctt-cacc 458
||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 756 gcacgacagagccgttccacagcgtgttgtcgtagccgatgaggccccccagctttcacc 697
Query: 459 agcttcagcagccgctcgtggtagttgaggtagttgtccttgtcggcgtccacgaagacg 518
||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 696 agcttgagcagccggtcgtggtagttgaggtagttgtcctngtcggcgtccacgaagacg 637
Query: 519 aagtcgaacgacccgtggttcttctcctccgcgatgaggtcgtcgaggacggggagcgcg 578
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 636 aagtcgaacgacccgtggttcttctcgtcggcgatgaggtcgtcgaggacggggagcgcg 577
Query: 579 ggaccctcgcggaagtcgatcttgtgggcgacgccggccttctcgatgcagggcaggccc 638
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 gggccctcgcggaagtcgatcttgtgggcgacgccggccttctcgatgcagggcaggccc 517
Query: 639 agctcgtagttctcgcggttgatgtccatggccaagatcgtgccgtcctccgggagggcg 698
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 516 agctcgtagttctcgcggttgatgtccatggccaagatcgtgccgtcctccgggagagcg 457
Query: 699 agcgccgtggcgaggagggagtagccggtgtagacgccgatctccatggtcttcttggcg 758
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 agcgcggtggcgaggagggagtagccggtgtagacgccgatctccatggtcttcttggcg 397
Query: 759 ccgatgagcttgatgagcatgttcaggaactgcccctcgtcggcggaggtcgtcatcagg 818
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 396 ccgatgagcttgatgagcatgttgaggaactgcccctcgtcggcggaggtcgtcatcagg 337
Query: 819 ttccatgggtgcttggcggtgatctcgcggagctccttcatgctctccggctcccgcggg 878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ttccatgggtgcttggcggtgatctcgcggagctccttcatgctctccggctcccgcggg 277
Query: 879 tacacgctcgtgtccaggatgtactggtagaggtcgtcgctcttgagcaggctcttgtgg 938
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tacacgctcgtgtccaggatgtactggtagaggtcgtcgctcttgagcaggctcttgtgt 217
Query: 939 ccgacctcggagtgccgcgtcttctgctcgcc------gttgccgttggcctgctgctcc 992
|||||||||||||| ||||||||||||||||| ||||||||||||||||| | ||
Sbjct: 216 ccgacctcggagtggcgcgtcttctgctcgccgttggcgttgccgttggcctgctccgcc 157
Query: 993 tgcgccggc---gccgcctcggtcgccgtggtggccattgcgtgcagtg 1038
|||| | | |||||||||||||||||||||||||||||| ||||||
Sbjct: 156 ggcgcggccttggccgcctcggtcgccgtggtggccattgcgggcagtg 108
>gb|CF479933.1|CF479933 POL1_62_E11.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_62_E11_A002 5', mRNA sequence
Length = 651
Score = 985 bits (497), Expect = 0.0
Identities = 574/592 (96%), Gaps = 7/592 (1%)
Strand = Plus / Minus
Query: 319 cggcggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcggatgtacttgc 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 cggcggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcggatgtacttgc 592
Query: 379 gcatgggcgcgtcgtcggggagcacgacggagccgttccacagcgtgttgtcgtagccga 438
||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 591 gcatgggggcgtcgtcggggagcacgacagagccgttccacagcgtgttgtcgtagccga 532
Query: 439 tgaggccgcccag-cttcaccagcttcagcagccgctcgtggtagttgaggtagttgtcc 497
||||||| ||||| ||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 531 tgaggccccccaggcttcaccagctg-agcagccggtcgtggtagttgaggtagttgtcc 473
Query: 498 ttgtcggcgtccacgaagacgaagtcgaacgacccgtggttcttctcctccg-cgatgag 556
||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||
Sbjct: 472 ttgtcggcgtccacgaagacgaagtcgaacgacccgtggttcttctcgtcggncgatgag 413
Query: 557 gtcgtcgaggacggggagcgc-gggaccctcgcggaagtc--gat-cttgtgggcgacgc 612
||||||||||||||||||||| ||| |||||||||||||| ||| ||||||||||||||
Sbjct: 412 gtcgtcgaggacggggagcgcnggggccctcgcggaagtcnngattcttgtgggcgacgc 353
Query: 613 cggccttctcgatgcagggcaggcccagctcgtagttctcgcggttgatgtccatggcca 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 cggccttctcgatgcagggcaggcccagctcgtagttctcgcggttgatgtccatggcca 293
Query: 673 agatcgtgccgtcctccgggagggcgagcgccgtggcgaggagggagtagccggtgtaga 732
|||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 292 agatcgtgccgtcctccgggagagcgagcgcggtggcgaggagggagtagccggtgtaga 233
Query: 733 cgccgatctccatggtcttcttggcgccgatgagcttgatgagcatgttcaggaactgcc 792
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 232 cgccgatctccatggtcttcttggcgccgatgagcttgatgagcatgttgaggaactgcc 173
Query: 793 cctcgtcggcggaggtcgtcatcaggttccatgggtgcttggcggtgatctcgcggagct 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 cctcgtcggcggaggtcgtcatcaggttccatgggtgcttggcggtgatctcgcggagct 113
Query: 853 ccttcatgctctccggctcccgcgggtacacgctcgtgtccaggatgtactg 904
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 ccttcatgctctccggctcccgcgggtacacgctcgtgtccaggatgtactg 61
>gb|CN123933.1|CN123933 RHOH1_1_D01.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_1_D01_A002 5', mRNA sequence
Length = 702
Score = 957 bits (483), Expect = 0.0
Identities = 558/583 (95%), Gaps = 9/583 (1%)
Strand = Plus / Minus
Query: 465 agcagccgctcgtggtagttgaggtagttgtccttgtcggcgtccacgaagacgaagtcg 524
|||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 698 agcagccggtcgtggtagttgaggtagttgtcctngtcggcgtccacgaagacgaagtcg 639
Query: 525 aacgacccgtggttcttctcctccgcgatgaggtcgtcgaggacggggagcgcgggaccc 584
|||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||
Sbjct: 638 aacgacccgtggttcttctcgtcggcgatgaggtcgtcgaggacggggagcgcggggccc 579
Query: 585 tcgcggaagtcgatcttgtgggcgacgccggccttctcgatgcagggcaggcccagctcg 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 tcgcggaagtcgatcttgtgggcgacgccggccttctcgatgcagggcaggcccagctcg 519
Query: 645 tagttctcgcggttgatgtccatggccaagatcgtgccgtcctccgggagggcgagcgcc 704
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 518 tagttctcgcggttgatgtccatggccaagatcgtgccgtcctccgggagagcgagcgcg 459
Query: 705 gtggcgaggagggagtagccggtgtagacgccgatctccatggtcttcttggcgccgatg 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 gtggcgaggagggagtagccggtgtagacgccgatctccatggtcttcttggcgccgatg 399
Query: 765 agcttgatgagcatgttcaggaactgcccctcgtcggcggaggtcgtcatcaggttccat 824
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 agcttgatgagcatgttgaggaactgcccctcgtcggcggaggtcgtcatcaggttccat 339
Query: 825 gggtgcttggcggtgatctcgcggagctccttcatgctctccggctcccgcgggtacacg 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 gggtgcttggcggtgatctcgcggagctccttcatgctctccggctcccgcgggtacacg 279
Query: 885 ctcgtgtccaggatgtactggtagaggtcgtcgctcttgagcaggctcttgtggccgacc 944
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 278 ctcgtgtccaggatgtactggtagaggtcgtcgctcttgagcaggctcttgtgtccgacc 219
Query: 945 tcggagtgccgcgtcttctgctcgcc------gttgccgttggcctgctgctcctgcgcc 998
|||||||| ||||||||||||||||| ||||||||||||||||| | || ||||
Sbjct: 218 tcggagtggcgcgtcttctgctcgccgttggcgttgccgttggcctgctccgccggcgcg 159
Query: 999 ggc---gccgcctcggtcgccgtggtggccattgcgtgcagtg 1038
| | |||||||||||||||||||||||||||||| ||||||
Sbjct: 158 gccttggccgcctcggtcgccgtggtggccattgcgggcagtg 116
>gb|CF433879.1|CF433879 NIT1_30_C03.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor cDNA
clone NIT1_30_C03_A002 5', mRNA sequence
Length = 670
Score = 948 bits (478), Expect = 0.0
Identities = 557/583 (95%), Gaps = 9/583 (1%)
Strand = Plus / Minus
Query: 465 agcagccgctcgtggtagttgaggtagttgtccttgtcggcgtccacgaagacgaagtcg 524
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 agcagccggtcgtggtagttgaggtagttgtccttgtcggcgtccacgaagacgaagtcg 609
Query: 525 aacgacccgtggttcttctcctccgcgatgaggtcgtcgaggacggggagcgcgggaccc 584
|||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||
Sbjct: 608 aacgacccgtggttcttctcgtcggcgatgaggtcgtcgaggacggggagcgcggggccc 549
Query: 585 tcgcggaagtcgatcttgtgggcgacgccggccttctcgatgcagggcaggcccagctcg 644
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 548 tcgcggaagtcgatcttgtgggtgacgccggccttctcgatgcagggcaggcccagctcg 489
Query: 645 tagttctcgcggttgatgtccatggccaagatcgtgccgtcctccgggagggcgagcgcc 704
||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 488 tagttctcgcggttgatgtccatggccaagaccgtgccgtcctccgggagagcgagcgcg 429
Query: 705 gtggcgaggagggagtagccggtgtagacgccgatctccatggtcttcttggcgccgatg 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 gtggcgaggagggagtagccggtgtagacgccgatctccatggtcttcttggcgccgatg 369
Query: 765 agcttgatgagcatgttcaggaactgcccctcgtcggcggaggtcgtcatcaggttccat 824
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 agcttgatgagcatgttgaggaactgcccctcgtcggcggaggtcgtcatcaggttccat 309
Query: 825 gggtgcttggcggtgatctcgcggagctccttcatgctctccggctcccgcgggtacacg 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggtgcttggcggtgatctcgcggagctccttcatgctctccggctcccgcgggtacacg 249
Query: 885 ctcgtgtccaggatgtactggtagaggtcgtcgctcttgagcaggctcttgtggccgacc 944
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 248 ctcgtgtccaggatgtactggtagaggtcgtcgctcttgagcaggctcttgtgtccgacc 189
Query: 945 tcggagtgccgcgtcttctgctcgc------cgttgccgttggcctgctgctcctgcgcc 998
|||||||| |||||||||||||||| |||||||||||||||||| | || ||||
Sbjct: 188 tcggagtggcgcgtcttctgctcgccgttggcgttgccgttggcctgctccgccggcgcg 129
Query: 999 ggc---gccgcctcggtcgccgtggtggccattgcgtgcagtg 1038
| | |||||||||||||||||||||||||||||| ||||||
Sbjct: 128 gccttggccgcctcggtcgccgtggtggccattgcgggcagtg 86
>gb|CD229208.1|CD229208 CCC1_13_F11.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_13_F11_A007 5', mRNA sequence
Length = 653
Score = 892 bits (450), Expect = 0.0
Identities = 523/547 (95%), Gaps = 9/547 (1%)
Strand = Plus / Minus
Query: 501 tcggcgtccacgaagacgaagtcgaacgacccgtggttcttctcctccgcgatgaggtcg 560
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 653 tcggcgtccacgaagacgaagtcgaacgacccgtggttcttctcgtcggcgatgaggtcg 594
Query: 561 tcgaggacggggagcgcgggaccctcgcggaagtcgatcttgtgggcgacgccggccttc 620
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 593 tcgaggacggggagcgcggggccctcgcggaagtcgatcttgtgggcgacgccggccttc 534
Query: 621 tcgatgcagggcaggcccagctcgtagttctcgcggttgatgtccatggccaagatcgtg 680
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 tcgatgcagggtaggcccagctcgtagttctcgcggttgatgtccatggccaagatcgtg 474
Query: 681 ccgtcctccgggagggcgagcgccgtggcgaggagggagtagccggtgtagacgccgatc 740
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 473 ccgtcctccgggagagcgagcgcggtggcgaggagggagtagccggtgtagacgccgatc 414
Query: 741 tccatggtcttcttggcgccgatgagcttgatgagcatgttcaggaactgcccctcgtcg 800
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 413 tccatggtcttcttggcgccgatgagcttgatgagcatgttgaggaactgcccctcgtcg 354
Query: 801 gcggaggtcgtcatcaggttccatgggtgcttggcggtgatctcgcggagctccttcatg 860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gcggaggtcgtcatcaggttccatgggtgcttggcggtgatctcgcggagctccttcatg 294
Query: 861 ctctccggctcccgcgggtacacgctcgtgtccaggatgtactggtagaggtcgtcgctc 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 ctctccggctcccgcgggtacacgctcgtgtccaggatgtactggtagaggtcgtcgctc 234
Query: 921 ttgagcaggctcttgtggccgacctcggagtgccgcgtcttctgctcgc------cgttg 974
||||||||||||||||| |||||||||||||| |||||||||||||||| |||||
Sbjct: 233 ttgagcaggctcttgtgtccgacctcggagtggcgcgtcttctgctcgccgttggcgttg 174
Query: 975 ccgttggcctgctgctcctgcgccggc---gccgcctcggtcgccgtggtggccattgcg 1031
||||||||||||| | || |||| | | ||||||||||||||||||||||||||||||
Sbjct: 173 ccgttggcctgctccgccggcgcggccttggccgcctcggtcgccgtggtggccattgcg 114
Query: 1032 tgcagtg 1038
||||||
Sbjct: 113 ggcagtg 107
>gb|BE125749.1|BE125749 DG1_55_H11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 464
Score = 833 bits (420), Expect = 0.0
Identities = 447/456 (98%)
Strand = Plus / Minus
Query: 438 atgaggccgcccagcttcaccagcttcagcagccgctcgtggtagttgaggtagttgtcc 497
|||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 464 atgaggccccccagcttcaccagcttgagcagccggtcgtggtagttgaggtagttgtcc 405
Query: 498 ttgtcggcgtccacgaagacgaagtcgaacgacccgtggttcttctcctccgcgatgagg 557
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 404 ttgtcggcgtccacgaagacgaagtcgaacgacccgtggttcttctcgtcggcgatgagg 345
Query: 558 tcgtcgaggacggggagcgcgggaccctcgcggaagtcgatcttgtgggcgacgccggcc 617
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 344 tcgtcgaggacggggagcgcggggccctcgcggaagtcgatcttgtgggcgacgccggcc 285
Query: 618 ttctcgatgcagggcaggcccagctcgtagttctcgcggttgatgtccatggccaagatc 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ttctcgatgcagggcaggcccagctcgtagttctcgcggttgatgtccatggccaagatc 225
Query: 678 gtgccgtcctccgggagggcgagcgccgtggcgaggagggagtagccggtgtagacgccg 737
||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 224 gtgccgtcctccgggagagcgagcgcggtggcgaggagggagtagccggtgtagacgccg 165
Query: 738 atctccatggtcttcttggcgccgatgagcttgatgagcatgttcaggaactgcccctcg 797
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 164 atctccatggtcttcttggcgccgatgagcttgatgagcatgttgaggaactgcccctcg 105
Query: 798 tcggcggaggtcgtcatcaggttccatgggtgcttggcggtgatctcgcggagctccttc 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 tcggcggaggtcgtcatcaggttccatgggtgcttggcggtgatctcgcggagctccttc 45
Query: 858 atgctctccggctcccgcgggtacacgctcgtgtcc 893
||||||||||||||||||||||||||||||||||||
Sbjct: 44 atgctctccggctcccgcgggtacacgctcgtgtcc 9
>gb|BG559195.1|BG559195 RHIZ2_55_G08.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 449
Score = 827 bits (417), Expect = 0.0
Identities = 441/449 (98%)
Strand = Plus / Minus
Query: 252 cacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctcgacg 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 cacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctcgacg 390
Query: 312 cggtcgtcggcggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcggatg 371
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 cgctcgtcggcggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcggatg 330
Query: 372 tacttgcgcatgggcgcgtcgtcggggagcacgacggagccgttccacagcgtgttgtcg 431
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tacttgcgcatgggggcgtcgtcggggagcacgacggagccgttccacagcgtgttgtcg 270
Query: 432 tagccgatgaggccgcccagcttcaccagcttcagcagccgctcgtggtagttgaggtag 491
|||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 269 tagccgatgaggccccccagcttcaccagcttgagcagccgctcgtggtagttgaggtag 210
Query: 492 ttgtccttgtcggcgtccacgaagacgaagtcgaacgacccgtggttcttctcctccgcg 551
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 209 ttgtccttgtcggcgtccacgaagacgaagtcgaacgacccgtggttcttctcgtcggcg 150
Query: 552 atgaggtcgtcgaggacggggagcgcgggaccctcgcggaagtcgatcttgtgggcgacg 611
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 149 atgaggtcgtcgaggacggggagcgcggggccctcgcggaagtcgatcttgtgggcgacg 90
Query: 612 ccggccttctcgatgcagggcaggcccagctcgtagttctcgcggttgatgtccatggcc 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 ccggccttctcgatgcagggcaggcccagctcgtagttctcgcggttgatgtccatggcc 30
Query: 672 aagatcgtgccgtcctccgggagggcgag 700
||||||||||||||||||||||| |||||
Sbjct: 29 aagatcgtgccgtcctccgggagagcgag 1
>gb|CD429608.1|CD429608 ETH1_14_C02.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_14_C02_A002 5', mRNA sequence
Length = 604
Score = 821 bits (414), Expect = 0.0
Identities = 478/499 (95%), Gaps = 9/499 (1%)
Strand = Plus / Minus
Query: 549 gcgatgaggtcgtcgaggacggggagcgcgggaccctcgcggaagtcgatcttgtgggcg 608
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 602 gcgatgaggtcgtcgaggacggggagcgcggggccctcgcggaagtcgatcttgtgggcg 543
Query: 609 acgccggccttctcgatgcagggcaggcccagctcgtagttctcgcggttgatgtccatg 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 acgccggccttctcgatgcagggcaggcccagctcgtagttctcgcggttgatgtccatg 483
Query: 669 gccaagatcgtgccgtcctccgggagggcgagcgccgtggcgaggagggagtagccggtg 728
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 482 gccaagatcgtgccgtcctccgggagagcgagcgcggtggcgaggagggagtagccggtg 423
Query: 729 tagacgccgatctccatggtcttcttggcgccgatgagcttgatgagcatgttcaggaac 788
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 422 tagacgccgatctccatggtcttcttggcgccgatgagcttgatgagcatgttgaggaac 363
Query: 789 tgcccctcgtcggcggaggtcgtcatcaggttccatgggtgcttggcggtgatctcgcgg 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tgcccctcgtcggcggaggtcgtcatcaggttccatgggtgcttggcggtgatctcgcgg 303
Query: 849 agctccttcatgctctccggctcccgcgggtacacgctcgtgtccaggatgtactggtag 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 agctccttcatgctctccggctcccgcgggtacacgctcgtgtccaggatgtactggtag 243
Query: 909 aggtcgtcgctcttgagcaggctcttgtggccgacctcggagtgccgcgtcttctgctcg 968
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 242 aggtcgtcgctcttgagcaggctcttgtgtccgacctcggagtggcgcgtcttctgctcg 183
Query: 969 cc------gttgccgttggcctgctgctcctgcgccggc---gccgcctcggtcgccgtg 1019
|| ||||||||||||||||| | || |||| | | ||||||||||||||||||
Sbjct: 182 ccgttggcgttgccgttggcctgctccgccggcgcggccttggccgcctcggtcgccgtg 123
Query: 1020 gtggccattgcgtgcagtg 1038
|||||||||||| ||||||
Sbjct: 122 gtggccattgcgggcagtg 104
>gb|CF432761.1|CF432761 NIT1_18_G06.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor cDNA
clone NIT1_18_G06_A002 5', mRNA sequence
Length = 603
Score = 821 bits (414), Expect = 0.0
Identities = 478/499 (95%), Gaps = 9/499 (1%)
Strand = Plus / Minus
Query: 549 gcgatgaggtcgtcgaggacggggagcgcgggaccctcgcggaagtcgatcttgtgggcg 608
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 603 gcgatgaggtcgtcgaggacggggagcgcggggccctcgcggaagtcgatcttgtgggcg 544
Query: 609 acgccggccttctcgatgcagggcaggcccagctcgtagttctcgcggttgatgtccatg 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 acgccggccttctcgatgcagggcaggcccagctcgtagttctcgcggttgatgtccatg 484
Query: 669 gccaagatcgtgccgtcctccgggagggcgagcgccgtggcgaggagggagtagccggtg 728
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 483 gccaagatcgtgccgtcctccgggagagcgagcgcggtggcgaggagggagtagccggtg 424
Query: 729 tagacgccgatctccatggtcttcttggcgccgatgagcttgatgagcatgttcaggaac 788
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 423 tagacgccgatctccatggtcttcttggcgccgatgagcttgatgagcatgttgaggaac 364
Query: 789 tgcccctcgtcggcggaggtcgtcatcaggttccatgggtgcttggcggtgatctcgcgg 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tgcccctcgtcggcggaggtcgtcatcaggttccatgggtgcttggcggtgatctcgcgg 304
Query: 849 agctccttcatgctctccggctcccgcgggtacacgctcgtgtccaggatgtactggtag 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 agctccttcatgctctccggctcccgcgggtacacgctcgtgtccaggatgtactggtag 244
Query: 909 aggtcgtcgctcttgagcaggctcttgtggccgacctcggagtgccgcgtcttctgctcg 968
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 243 aggtcgtcgctcttgagcaggctcttgtgtccgacctcggagtggcgcgtcttctgctcg 184
Query: 969 c------cgttgccgttggcctgctgctcctgcgccggc---gccgcctcggtcgccgtg 1019
| |||||||||||||||||| | || |||| | | ||||||||||||||||||
Sbjct: 183 ccgttggcgttgccgttggcctgctccgccggcgcggccttggccgcctcggtcgccgtg 124
Query: 1020 gtggccattgcgtgcagtg 1038
|||||||||||| ||||||
Sbjct: 123 gtggccattgcgggcagtg 105
>gb|BI141003.1|BI141003 IP1_41_H11.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 595
Score = 813 bits (410), Expect = 0.0
Identities = 474/495 (95%), Gaps = 9/495 (1%)
Strand = Plus / Minus
Query: 553 tgaggtcgtcgaggacggggagcgcgggaccctcgcggaagtcgatcttgtgggcgacgc 612
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 595 tgaggtcgtcgaggacggggagcgcggggccctcgcggaagtcgatcttgtgggcgacgc 536
Query: 613 cggccttctcgatgcagggcaggcccagctcgtagttctcgcggttgatgtccatggcca 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 cggccttctcgatgcagggcaggcccagctcgtagttctcgcggttgatgtccatggcca 476
Query: 673 agatcgtgccgtcctccgggagggcgagcgccgtggcgaggagggagtagccggtgtaga 732
|||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 475 agatcgtgccgtcctccgggagagcgagcgcggtggcgaggagggagtagccggtgtaga 416
Query: 733 cgccgatctccatggtcttcttggcgccgatgagcttgatgagcatgttcaggaactgcc 792
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 415 cgccgatctccatggtcttcttggcgccgatgagcttgatgagcatgttgaggaactgcc 356
Query: 793 cctcgtcggcggaggtcgtcatcaggttccatgggtgcttggcggtgatctcgcggagct 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 cctcgtcggcggaggtcgtcatcaggttccatgggtgcttggcggtgatctcgcggagct 296
Query: 853 ccttcatgctctccggctcccgcgggtacacgctcgtgtccaggatgtactggtagaggt 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 ccttcatgctctccggctcccgcgggtacacgctcgtgtccaggatgtactggtagaggt 236
Query: 913 cgtcgctcttgagcaggctcttgtggccgacctcggagtgccgcgtcttctgctcgc--- 969
||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 235 cgtcgctcttgagcaggctcttgtgtccgacctcggagtggcgcgtcttctgctcgccgt 176
Query: 970 ---cgttgccgttggcctgctgctcctgcgccggc---gccgcctcggtcgccgtggtgg 1023
|||||||||||||||||| | || |||| | | ||||||||||||||||||||||
Sbjct: 175 tggcgttgccgttggcctgctccgccggcgcggccttggccgcctcggtcgccgtggtgg 116
Query: 1024 ccattgcgtgcagtg 1038
|||||||| ||||||
Sbjct: 115 ccattgcgggcagtg 101
>gb|BI140992.1|BI140992 IP1_41_G12.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 593
Score = 809 bits (408), Expect = 0.0
Identities = 472/493 (95%), Gaps = 9/493 (1%)
Strand = Plus / Minus
Query: 555 aggtcgtcgaggacggggagcgcgggaccctcgcggaagtcgatcttgtgggcgacgccg 614
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 593 aggtcgtcgaggacggggagcgcggggccctcgcggaagtcgatcttgtgggcgacgccg 534
Query: 615 gccttctcgatgcagggcaggcccagctcgtagttctcgcggttgatgtccatggccaag 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 gccttctcgatgcagggcaggcccagctcgtagttctcgcggttgatgtccatggccaag 474
Query: 675 atcgtgccgtcctccgggagggcgagcgccgtggcgaggagggagtagccggtgtagacg 734
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 473 atcgtgccgtcctccgggagagcgagcgcggtggcgaggagggagtagccggtgtagacg 414
Query: 735 ccgatctccatggtcttcttggcgccgatgagcttgatgagcatgttcaggaactgcccc 794
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 413 ccgatctccatggtcttcttggcgccgatgagcttgatgagcatgttgaggaactgcccc 354
Query: 795 tcgtcggcggaggtcgtcatcaggttccatgggtgcttggcggtgatctcgcggagctcc 854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 tcgtcggcggaggtcgtcatcaggttccatgggtgcttggcggtgatctcgcggagctcc 294
Query: 855 ttcatgctctccggctcccgcgggtacacgctcgtgtccaggatgtactggtagaggtcg 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 ttcatgctctccggctcccgcgggtacacgctcgtgtccaggatgtactggtagaggtcg 234
Query: 915 tcgctcttgagcaggctcttgtggccgacctcggagtgccgcgtcttctgctcgc----- 969
||||||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 233 tcgctcttgagcaggctcttgtgtccgacctcggagtggcgcgtcttctgctcgccgttg 174
Query: 970 -cgttgccgttggcctgctgctcctgcgccggc---gccgcctcggtcgccgtggtggcc 1025
|||||||||||||||||| | || |||| | | ||||||||||||||||||||||||
Sbjct: 173 gcgttgccgttggcctgctccgccggcgcggccttggccgcctcggtcgccgtggtggcc 114
Query: 1026 attgcgtgcagtg 1038
|||||| ||||||
Sbjct: 113 attgcgggcagtg 101
>gb|CF427278.1|CF427278 PH1_4_H04.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_4_H04_A002 5', mRNA sequence
Length = 600
Score = 809 bits (408), Expect = 0.0
Identities = 472/493 (95%), Gaps = 9/493 (1%)
Strand = Plus / Minus
Query: 555 aggtcgtcgaggacggggagcgcgggaccctcgcggaagtcgatcttgtgggcgacgccg 614
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 600 aggtcgtcgaggacggggagcgcggggccctcgcggaagtcgatcttgtgggcgacgccg 541
Query: 615 gccttctcgatgcagggcaggcccagctcgtagttctcgcggttgatgtccatggccaag 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gccttctcgatgcagggcaggcccagctcgtagttctcgcggttgatgtccatggccaag 481
Query: 675 atcgtgccgtcctccgggagggcgagcgccgtggcgaggagggagtagccggtgtagacg 734
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 480 atcgtgccgtcctccgggagagcgagcgcggtggcgaggagggagtagccggtgtagacg 421
Query: 735 ccgatctccatggtcttcttggcgccgatgagcttgatgagcatgttcaggaactgcccc 794
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 420 ccgatctccatggtcttcttggcgccgatgagcttgatgagcatgttgaggaactgcccc 361
Query: 795 tcgtcggcggaggtcgtcatcaggttccatgggtgcttggcggtgatctcgcggagctcc 854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tcgtcggcggaggtcgtcatcaggttccatgggtgcttggcggtgatctcgcggagctcc 301
Query: 855 ttcatgctctccggctcccgcgggtacacgctcgtgtccaggatgtactggtagaggtcg 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ttcatgctctccggctcccgcgggtacacgctcgtgtccaggatgtactggtagaggtcg 241
Query: 915 tcgctcttgagcaggctcttgtggccgacctcggagtgccgcgtcttctgctcgcc---- 970
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 240 tcgctcttgagcaggctcttgtgtccgacctcggagtggcgcgtcttctgctcgccgttg 181
Query: 971 --gttgccgttggcctgctgctcctgcgccggc---gccgcctcggtcgccgtggtggcc 1025
||||||||||||||||| | || |||| | | ||||||||||||||||||||||||
Sbjct: 180 gcgttgccgttggcctgctccgccggcgcggccttggccgcctcggtcgccgtggtggcc 121
Query: 1026 attgcgtgcagtg 1038
|||||| ||||||
Sbjct: 120 attgcgggcagtg 108
>gb|CN135765.1|CN135765 OX1_38_G08.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_38_G08_A002 5', mRNA sequence
Length = 553
Score = 793 bits (400), Expect = 0.0
Identities = 467/489 (95%), Gaps = 9/489 (1%)
Strand = Plus / Minus
Query: 559 cgtcgaggacggggagcgcgggaccctcgcggaagtcgatcttgtgggcgacgccggcct 618
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 553 cgtcgaggacggggagcgcggggccctcgcggaagtcgatcttgtgggcgacgccggcct 494
Query: 619 tctcgatgcagggcaggcccagctcgtagttctcgcggttgatgtccatggccaagatcg 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tctcgatgcagggcaggcccagctcgtagttctcgcggttgatgtccatggccaagatcg 434
Query: 679 tgccgtcctccgggagggcgagcgccgtggcgaggagggagtagccggtgtagacgccga 738
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 433 tgccgtcctccgggagagcgagcgcggtggcgaggagggagtagccggtgtagacgccga 374
Query: 739 tctccatggtcttcttggcgccgatgagcttgatgagcatgttcaggaactgcccctcgt 798
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 373 tctccatggtcttcttggcgccgatgagcttgatgagcatgttgaggaactgcccctcgt 314
Query: 799 cggcggaggtcgtcatcaggttccatgggtgcttggcggtgatctcgcggagctccttca 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 cggcggaggtcgtcatcaggttccatgggtgcttggcggtgatctcgcggagctccttca 254
Query: 859 tgctctccggctcccgcgggtacacgctcgtgtccaggatgtactggtagaggtcgtcgc 918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 tgctctccggctcccgcgggtacacgctcgtgtccaggatgtactggtagaggtcgtcgc 194
Query: 919 tcttgagcaggctcttgtggccgacctcggagtgccgcgtcttctgctcgccgttg---- 974
||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 193 tcttgagcaggctcttgtgtccgacctcggagtggcgcgtcttctgctcgccgttggcgt 134
Query: 975 --ccgttggcctgctgctcctgcgccggc---gccgcctcggtcgccgtggtggccattg 1029
|||||||| |||| | || |||| | | ||||||||||||||||||||||||||||
Sbjct: 133 tgccgttggcatgctccgccggcgcggccttggccgcctcggtcgccgtggtggccattg 74
Query: 1030 cgtgcagtg 1038
|| ||||||
Sbjct: 73 cgggcagtg 65
>gb|BE360219.1|BE360219 DG1_62_C12.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 583
Score = 791 bits (399), Expect = 0.0
Identities = 463/484 (95%), Gaps = 9/484 (1%)
Strand = Plus / Minus
Query: 564 aggacggggagcgcgggaccctcgcggaagtcgatcttgtgggcgacgccggccttctcg 623
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 aggacggggagcgcggggccctcgcggaagtcgatcttgtgggcgacgccggccttctcg 524
Query: 624 atgcagggcaggcccagctcgtagttctcgcggttgatgtccatggccaagatcgtgccg 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 atgcagggcaggcccagctcgtagttctcgcggttgatgtccatggccaagatcgtgccg 464
Query: 684 tcctccgggagggcgagcgccgtggcgaggagggagtagccggtgtagacgccgatctcc 743
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 463 tcctccgggagagcgagcgcggtggcgaggagggagtagccggtgtagacgccgatctcc 404
Query: 744 atggtcttcttggcgccgatgagcttgatgagcatgttcaggaactgcccctcgtcggcg 803
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 403 atggtcttcttggcgccgatgagcttgatgagcatgttgaggaactgcccctcgtcggcg 344
Query: 804 gaggtcgtcatcaggttccatgggtgcttggcggtgatctcgcggagctccttcatgctc 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 gaggtcgtcatcaggttccatgggtgcttggcggtgatctcgcggagctccttcatgctc 284
Query: 864 tccggctcccgcgggtacacgctcgtgtccaggatgtactggtagaggtcgtcgctcttg 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tccggctcccgcgggtacacgctcgtgtccaggatgtactggtagaggtcgtcgctcttg 224
Query: 924 agcaggctcttgtggccgacctcggagtgccgcgtcttctgctcgcc------gttgccg 977
|||||||||||||| |||||||||||||| ||||||||||||||||| |||||||
Sbjct: 223 agcaggctcttgtgtccgacctcggagtggcgcgtcttctgctcgccgttggcgttgccg 164
Query: 978 ttggcctgctgctcctgcgccggc---gccgcctcggtcgccgtggtggccattgcgtgc 1034
|||||||||| | || |||| | | |||||||||||||||||||||||||||||| ||
Sbjct: 163 ttggcctgctccgccggcgcggccttggccgcctcggtcgccgtggtggccattgcgggc 104
Query: 1035 agtg 1038
||||
Sbjct: 103 agtg 100
>gb|CN127149.1|CN127149 RHOH1_21_G07.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_21_G07_A002 3', mRNA sequence
Length = 819
Score = 783 bits (395), Expect = 0.0
Identities = 431/443 (97%)
Strand = Plus / Minus
Query: 355 cgcggtagaagcggatgtacttgcgcatgggcgcgtcgtcggggagcacgacggagccgt 414
||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 443 cgcggtagaagcggatgtacttgcgcatgggggcgtcgtcggggagcacgacagagccgt 384
Query: 415 tccacagcgtgttgtcgtagccgatgaggccgcccagcttcaccagcttcagcagccgct 474
||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |
Sbjct: 383 tccacagcgtgttgtcgtagccgatgaggccccccagcttcaccagcttgagcagccggt 324
Query: 475 cgtggtagttgaggtagttgtccttgtcggcgtccacgaagacgaagtcgaacgacccgt 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cgtggtagttgaggtagttgtccttgtcggcgtccacgaagacgaagtcgaacgacccgt 264
Query: 535 ggttcttctcctccgcgatgaggtcgtcgaggacggggagcgcgggaccctcgcggaagt 594
||| |||||| || |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 263 ggtccttctcgtcggcgatgaggtcgtcgaggacggggagcgcggggccctcgcggaagt 204
Query: 595 cgatcttgtgggcgacgccggccttctcgatgcagggcaggcccagctcgtagttctcgc 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 cgatcttgtgggcgacgccggccttctcgatgcagggcaggcccagctcgtagttctcgc 144
Query: 655 ggttgatgtccatggccaagatcgtgccgtcctccgggagggcgagcgccgtggcgagga 714
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 143 ggttgatgtccatggccaagatcgtgccgtcctccgggagagcgagcgcggtggcgagga 84
Query: 715 gggagtagccggtgtagacgccgatctccatggtcttcttggcgccgatgagcttgatga 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 gggagtagccggtgtagacgccgatctccatggtcttcttggcgccgatgagcttgatga 24
Query: 775 gcatgttcaggaactgcccctcg 797
||||||| |||||||||||||||
Sbjct: 23 gcatgttgaggaactgcccctcg 1
Score = 135 bits (68), Expect = 1e-029
Identities = 68/68 (100%)
Strand = Plus / Minus
Query: 248 ttttcacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctc 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttttcacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctc 446
Query: 308 gacgcggt 315
||||||||
Sbjct: 445 gacgcggt 438
Score = 60.0 bits (30), Expect = 5e-007
Identities = 70/80 (87%), Gaps = 5/80 (6%)
Strand = Plus / Minus
Query: 144 gccggtggataattaatgctgcgggtcgtcta--ttatgattggaat-gaggatgcggc- 199
||||||| ||||||||||||||| |||||||| ||||||||| || | |||||||||
Sbjct: 597 gccggtgaataattaatgctgcgcgtcgtctacgatatgattgggatgggggatgcggcg 538
Query: 200 -cggcggcgccgtcggtggc 218
|||||||||||||||||||
Sbjct: 537 gcggcggcgccgtcggtggc 518
>gb|CD428979.1|CD428979 ETH1_1_A03.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_1_A03_A002 5', mRNA sequence
Length = 586
Score = 781 bits (394), Expect = 0.0
Identities = 458/479 (95%), Gaps = 9/479 (1%)
Strand = Plus / Minus
Query: 569 ggggagcgcgggaccctcgcggaagtcgatcttgtgggcgacgccggccttctcgatgca 628
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 ggggagcgcggggccctcgcggaagtcgatcttgtgggcgacgccggccttctcgatgca 527
Query: 629 gggcaggcccagctcgtagttctcgcggttgatgtccatggccaagatcgtgccgtcctc 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 gggcaggcccagctcgtagttctcgcggttgatgtccatggccaagatcgtgccgtcctc 467
Query: 689 cgggagggcgagcgccgtggcgaggagggagtagccggtgtagacgccgatctccatggt 748
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 cgggagagcgagcgcggtggcgaggagggagtagccggtgtagacgccgatctccatggt 407
Query: 749 cttcttggcgccgatgagcttgatgagcatgttcaggaactgcccctcgtcggcggaggt 808
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 406 cttcttggcgccgatgagcttgatgagcatgttgaggaactgcccctcgtcggcggaggt 347
Query: 809 cgtcatcaggttccatgggtgcttggcggtgatctcgcggagctccttcatgctctccgg 868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 cgtcatcaggttccatgggtgcttggcggtgatctcgcggagctccttcatgctctccgg 287
Query: 869 ctcccgcgggtacacgctcgtgtccaggatgtactggtagaggtcgtcgctcttgagcag 928
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ctcccgcgggtacacgctcgtgtccaggatgtactggtagaggtcgtcgctcttgagcag 227
Query: 929 gctcttgtggccgacctcggagtgccgcgtcttctgctcgcc------gttgccgttggc 982
||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 226 gctcttgtgtccgacctcggagtggcgcgtcttctgctcgccgttggcgttgccgttggc 167
Query: 983 ctgctgctcctgcgccggc---gccgcctcggtcgccgtggtggccattgcgtgcagtg 1038
||||| | || |||| | | |||||||||||||||||||||||||||||| ||||||
Sbjct: 166 ctgctccgccggcgcggccttggccgcctcggtcgccgtggtggccattgcgggcagtg 108
>gb|CF480279.1|CF480279 POL1_64_F12.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_64_F12_A002 5', mRNA sequence
Length = 649
Score = 769 bits (388), Expect = 0.0
Identities = 418/428 (97%)
Strand = Plus / Plus
Query: 248 ttttcacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctc 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 ttttcacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctc 281
Query: 308 gacgcggtcgtcggcggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcg 367
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 gacgcgctcgtcggcggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcg 341
Query: 368 gatgtacttgcgcatgggcgcgtcgtcggggagcacgacggagccgttccacagcgtgtt 427
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 342 gatgtacttgcgcatgggggcgtcgtcggggagcacgacagagccgttccacagcgtgtt 401
Query: 428 gtcgtagccgatgaggccgcccagcttcaccagcttcagcagccgctcgtggtagttgag 487
|||||||||||||||||| ||||||||| ||||||| |||||||| ||||||||||||||
Sbjct: 402 gtcgtagccgatgaggccccccagcttcgccagcttgagcagccggtcgtggtagttgag 461
Query: 488 gtagttgtccttgtcggcgtccacgaagacgaagtcgaacgacccgtggttcttctcctc 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 462 gtagttgtccttgtcggcgtccacgaagacgaagtcgaacgacccgtggttcttctcgtc 521
Query: 548 cgcgatgaggtcgtcgaggacggggagcgcgggaccctcgcggaagtcgatcttgtgggc 607
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 522 ggcgatgaggtcgtcgaggacggggagcgcggggccctcgcggaagtcgatcttgtgggc 581
Query: 608 gacgccggccttctcgatgcagggcaggcccagctcgtagttctcgcggttgatgtccat 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 gacgccggccttctcgatgcagggcaggcccagctcgtagttctcgcggttgatgtccat 641
Query: 668 ggccaaga 675
||||||||
Sbjct: 642 ggccaaga 649
Score = 60.0 bits (30), Expect = 5e-007
Identities = 70/80 (87%), Gaps = 5/80 (6%)
Strand = Plus / Plus
Query: 144 gccggtggataattaatgctgcgggtcgtcta--ttatgattggaat-gaggatgcggc- 199
||||||| ||||||||||||||| |||||||| ||||||||| || | |||||||||
Sbjct: 130 gccggtgaataattaatgctgcgcgtcgtctacgatatgattgggatgggggatgcggcg 189
Query: 200 -cggcggcgccgtcggtggc 218
|||||||||||||||||||
Sbjct: 190 gcggcggcgccgtcggtggc 209
Score = 44.1 bits (22), Expect = 0.027
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 109 aaagattacaggggcaagaaagagcc 134
||||||||||||| ||||||||||||
Sbjct: 93 aaagattacagggccaagaaagagcc 118
>gb|CN137990.1|CN137990 OX1_61_C04.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_61_C04_A002 3', mRNA sequence
Length = 716
Score = 763 bits (385), Expect = 0.0
Identities = 415/425 (97%)
Strand = Plus / Minus
Query: 248 ttttcacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctc 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ttttcacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctc 366
Query: 308 gacgcggtcgtcggcggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcg 367
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gacgcgctcgtcggcggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcg 306
Query: 368 gatgtacttgcgcatgggcgcgtcgtcggggagcacgacggagccgttccacagcgtgtt 427
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 305 gatgtacttgcgcatgggggcgtcgtcggggagcacgacagagccgttccacagcgtgtt 246
Query: 428 gtcgtagccgatgaggccgcccagcttcaccagcttcagcagccgctcgtggtagttgag 487
|||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 245 gtcgtagccgatgaggccccccagcttcaccagcttgagcagccggtcgtggtagttgag 186
Query: 488 gtagttgtccttgtcggcgtccacgaagacgaagtcgaacgacccgtggttcttctcctc 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 185 gtagttgtccttgtcggcgtccacgaagacgaagtcgaacgacccgtggttcttctcgtc 126
Query: 548 cgcgatgaggtcgtcgaggacggggagcgcgggaccctcgcggaagtcgatcttgtgggc 607
|||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 125 ggcgatgaggtcgtcaaggacggggagcgcggggccctcgcggaagtcgatcttgtgggc 66
Query: 608 gacgccggccttctcgatgcagggcaggcccagctcgtagttctcgcggttgatgtccat 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 gacgccggccttctcgatgcagggcaggcccagctcgtagttctcgcggttgatgtccat 6
Query: 668 ggcca 672
|||||
Sbjct: 5 ggcca 1
Score = 52.0 bits (26), Expect = 1e-004
Identities = 69/80 (86%), Gaps = 5/80 (6%)
Strand = Plus / Minus
Query: 144 gccggtggataattaatgctgcgggtcgtctat--tatgattggaatgagg-atgcggc- 199
||||||| |||||||| |||||| |||||||| ||||||||| ||| || |||||||
Sbjct: 517 gccggtgaataattaaggctgcgcgtcgtctacgatatgattgggatgggggatgcggcg 458
Query: 200 -cggcggcgccgtcggtggc 218
|||||||||||||||||||
Sbjct: 457 gcggcggcgccgtcggtggc 438
Score = 44.1 bits (22), Expect = 0.027
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 109 aaagattacaggggcaagaaagagcc 134
||||||||||||| ||||||||||||
Sbjct: 555 aaagattacagggccaagaaagagcc 530
>gb|CN128942.1|CN128942 RHOH1_32_C05.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_32_C05_A002 5', mRNA sequence
Length = 826
Score = 757 bits (382), Expect = 0.0
Identities = 412/422 (97%)
Strand = Plus / Minus
Query: 248 ttttcacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctc 307
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 778 ttttcacttgacgcggcggcagagggtgacgctgtcgccgacggggagctggcagatctc 719
Query: 308 gacgcggtcgtcggcggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcg 367
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 gacgcgctcgtcggcggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcg 659
Query: 368 gatgtacttgcgcatgggcgcgtcgtcggggagcacgacggagccgttccacagcgtgtt 427
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 658 gatgtacttgcgcatgggggcgtcgtcggggagcacgacagagccgttccacagcgtgtt 599
Query: 428 gtcgtagccgatgaggccgcccagcttcaccagcttcagcagccgctcgtggtagttgag 487
|||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 598 gtcgtagccgatgaggccccccagcttcaccagcttgagcagccggtcgtggtagttgag 539
Query: 488 gtagttgtccttgtcggcgtccacgaagacgaagtcgaacgacccgtggttcttctcctc 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 538 gtagttgtccttgtcggcgtccacgaagacgaagtcgaacgacccgtggttcttctcgtc 479
Query: 548 cgcgatgaggtcgtcgaggacggggagcgcgggaccctcgcggaagtcgatcttgtgggc 607
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 478 ggcgatgaggtcgtcgaggacggggagcgcggggccctcgcggaagtcgatcttgtgggc 419
Query: 608 gacgccggccttctcgatgcagggcaggcccagctcgtagttctcgcggttgatgtccat 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 gacgccggccttctcgatgcagggcaggcccagctcgtagttctcgcggttgatgtccat 359
Query: 668 gg 669
||
Sbjct: 358 gg 357
Score = 456 bits (230), Expect = e-126
Identities = 288/307 (93%), Gaps = 9/307 (2%)
Strand = Plus / Minus
Query: 741 tccatggtcttcttggcgccgatgagcttgatgagcatgttcaggaactgcccctcgtcg 800
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 363 tccatggtcttcttggcgccgatgagcttgatgagcatgttgaggaactgcccctcgtcg 304
Query: 801 gcggaggtcgtcatcaggttccatgggtgcttggcggtgatctcgcggagctccttcatg 860
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 303 gcggaggtcgtcatcaggttccatgggtgctcggcggtgatctcgcggagctccttcatg 244
Query: 861 ctctccggctcccgcgggtacacgctcgtgtccaggatgtactggtagaggtcgtcgctc 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ctctccggctcccgcgggtacacgctcgtgtccaggatgtactggtagaggtcgtcgctc 184
Query: 921 ttgagcaggctcttgtggccgacctcggagtgccgcgtcttctgctcgc------cgttg 974
||||||||||||||||| |||||||||||||| |||||||||||||||| |||||
Sbjct: 183 ttgagcaggctcttgtgtccgacctcggagtggcgcgtcttctgctcgccgttggcgttg 124
Query: 975 ccgttggcctgctgctcctgcgccggc---gccgcctcggtcgccgtggtggccattgcg 1031
||||||||||||| | || |||| | | ||||||||||||||||||||||||||||||
Sbjct: 123 ccgttggcctgctccgccggcgcggccttggccgcctcggtcgccgtggtggccattgcg 64
Query: 1032 tgcagtg 1038
||||||
Sbjct: 63 ggcagtg 57
>gb|BG356843.1|BG356843 OV2_10_F11.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 541
Score = 755 bits (381), Expect = 0.0
Identities = 408/417 (97%)
Strand = Plus / Minus
Query: 248 ttttcacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctc 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 ttttcacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctc 358
Query: 308 gacgcggtcgtcggcggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcg 367
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gacgcgctcgtcggcggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcg 298
Query: 368 gatgtacttgcgcatgggcgcgtcgtcggggagcacgacggagccgttccacagcgtgtt 427
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 297 gatgtacttgcgcatgggggcgtcgtcggggagcacgacagagccgttccacagcgtgtt 238
Query: 428 gtcgtagccgatgaggccgcccagcttcaccagcttcagcagccgctcgtggtagttgag 487
|||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 237 gtcgtagccgatgaggccccccagcttcaccagcttgagcagccggtcgtggtagttgag 178
Query: 488 gtagttgtccttgtcggcgtccacgaagacgaagtcgaacgacccgtggttcttctcctc 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 177 gtagttgtccttgtcggcgtccacgaagacgaagtcgaacgacccgtggttcttctcgtc 118
Query: 548 cgcgatgaggtcgtcgaggacggggagcgcgggaccctcgcggaagtcgatcttgtgggc 607
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 117 ggcgatgaggtcgtcgaggacggggagcgcggggccctcgcggaagtcgatcttgtgggc 58
Query: 608 gacgccggccttctcgatgcagggcaggcccagctcgtagttctcgcggttgatgtc 664
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57 gacgccggccttctcgatgcagggcaggcccagctcgtagttctcgcggttgatgtc 1
Score = 60.0 bits (30), Expect = 5e-007
Identities = 70/80 (87%), Gaps = 5/80 (6%)
Strand = Plus / Minus
Query: 144 gccggtggataattaatgctgcgggtcgtcta--ttatgattggaat-gaggatgcggc- 199
||||||| ||||||||||||||| |||||||| ||||||||| || | |||||||||
Sbjct: 509 gccggtgaataattaatgctgcgcgtcgtctacgatatgattgggatgggggatgcggcg 450
Query: 200 -cggcggcgccgtcggtggc 218
|||||||||||||||||||
Sbjct: 449 gcggcggcgccgtcggtggc 430
>gb|CN133810.1|CN133810 OX1_18_A10.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_18_A10_A002 5', mRNA sequence
Length = 555
Score = 728 bits (367), Expect = 0.0
Identities = 448/477 (93%), Gaps = 9/477 (1%)
Strand = Plus / Minus
Query: 571 ggagcgcgggaccctcgcggaagtcgatcttgtgggcgacgccggccttctcgatgcagg 630
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 ggagcgcggngccctcgcggaagtcgatcttgtgggcgacgccggccttctcgatgcagg 496
Query: 631 gcaggcccagctcgtagttctcgcggttgatgtccatggccaagatcgtgccgtcctccg 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 gcaggcccagctcgtagttctcgcggttgatgtccatggccaagatcgtgccgtcctccg 436
Query: 691 ggagggcgagcgccgtggcgaggagggagtagccggtgtagacgccgatctccatggtct 750
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ggagagcgagcgcggtggcgaggagggagtagccggtgtagacgccgatctccatggtct 376
Query: 751 tcttggcgccgatgagcttgatgagcatgttcaggaactgcccctcgtcggcggaggtcg 810
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 375 tcttggcgccgatgagcttgatgagcatgttgaggaactgcccctcgtcggcggaggtgg 316
Query: 811 tcatcaggttccatgggtgcttggcggtgatctcgcggagctccttcatgctctccggct 870
||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 315 tcatcaggttccanggnnncttnncggtgatctcgcggagctccttcatgctctccggct 256
Query: 871 cccgcgggtacacgctcgtgtccaggatgtactggtagaggtcgtcgctcttgagcaggc 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 cccgcgggtacacgctcgtgtccaggatgtactggtagaggtcgtcgctcttgagcaggc 196
Query: 931 tcttgtggccgacctcggagtgccgcgtcttctgctcgc------cgttgccgttggcct 984
||||||| |||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 195 tcttgtgtccgacctcggagtggcgcgtcttctgctcgccgttggcgttgccgttggcct 136
Query: 985 gctgctcctgcgccggc---gccgcctcggtcgccgtggtggccattgcgtgcagtg 1038
||| | || |||| | | |||||||||||||||||||||||||||||| ||||||
Sbjct: 135 gctccgccggcgcggccttggccgcctcggtcgccgtggtggccattgcgggcagtg 79
>gb|CN128863.1|CN128863 RHOH1_32_C05.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_32_C05_A002 3', mRNA sequence
Length = 752
Score = 718 bits (362), Expect = 0.0
Identities = 407/422 (96%)
Strand = Plus / Minus
Query: 248 ttttcacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctc 307
|||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Sbjct: 532 ttttcacttgacgcggcggcagagggtgacgccgtccccgacggggagctgggagatctc 473
Query: 308 gacgcggtcgtcggcggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcg 367
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 472 gacgcgctcgtcggcggcgagcgccttgttgaggacgagcacgaagtcccggtagaagcg 413
Query: 368 gatgtacttgcgcatgggcgcgtcgtcggggagcacgacggagccgttccacagcgtgtt 427
|||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||
Sbjct: 412 gatgtacttgcgcatgggggcgtcgtcggggagcacgacagaaccgttccacagcgtgtt 353
Query: 428 gtcgtagccgatgaggccgcccagcttcaccagcttcagcagccgctcgtggtagttgag 487
|||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 352 gtcgtagccgatgaggccccccagcttcaccagcttgagcagccggtcgtggtagttgag 293
Query: 488 gtagttgtccttgtcggcgtccacgaagacgaagtcgaacgacccgtggttcttctcctc 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 292 gtagttgtccttgtcggcgtccacgaagacgaagtcgaacgacccgtggttcttctcgtc 233
Query: 548 cgcgatgaggtcgtcgaggacggggagcgcgggaccctcgcggaagtcgatcttgtgggc 607
|||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 232 ggcgatgaggtcgtcaaggacggggagcgcggggccctcccggaagtcgatcttgtgggc 173
Query: 608 gacgccggccttctcgatgcagggcaggcccagctcgtagttctcgcggttgatgtccat 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 gacgccggccttctcgatgcagggcaggcccagctcgtagttctcgcggttgatgtccat 113
Query: 668 gg 669
||
Sbjct: 112 gg 111
Score = 200 bits (101), Expect = 2e-049
Identities = 113/117 (96%)
Strand = Plus / Minus
Query: 741 tccatggtcttcttggcgccgatgagcttgatgagcatgttcaggaactgcccctcgtcg 800
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 117 tccatggtcttcttggcgcccatgagcttgatgagcatgttgaggaactgcccctcgtcg 58
Query: 801 gcggaggtcgtcatcaggttccatgggtgcttggcggtgatctcgcggagctccttc 857
|||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 57 gcggaggtcgtcatcaggttccatgggtgcttgggggagatctcgcggagctccttc 1
Score = 60.0 bits (30), Expect = 5e-007
Identities = 70/80 (87%), Gaps = 5/80 (6%)
Strand = Plus / Minus
Query: 144 gccggtggataattaatgctgcgggtcgtcta--ttatgattggaat-gaggatgcggc- 199
||||||| ||||||||||||||| |||||||| ||||||||| || | |||||||||
Sbjct: 623 gccggtgaataattaatgctgcgcgtcgtctacgatatgattgggatgggggatgcggcg 564
Query: 200 -cggcggcgccgtcggtggc 218
|||||||||||||||||||
Sbjct: 563 gcggcggcgccgtcggtggc 544
>gb|BG357173.1|BG357173 OV2_10_F11.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 534
Score = 698 bits (352), Expect = 0.0
Identities = 413/433 (95%), Gaps = 9/433 (2%)
Strand = Plus / Minus
Query: 615 gccttctcgatgcagggcaggcccagctcgtagttctcgcggttgatgtccatggccaag 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 gccttctcgatgcagggcaggcccagctcgtagttctcgcggttgatgtccatggccaag 475
Query: 675 atcgtgccgtcctccgggagggcgagcgccgtggcgaggagggagtagccggtgtagacg 734
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 474 atcgtgccgtcctccgggagagcgagcgcggtggcgaggagggagtagccggtgtagacg 415
Query: 735 ccgatctccatggtcttcttggcgccgatgagcttgatgagcatgttcaggaactgcccc 794
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 414 ccgatctccatggtcttcttggcgccgatgagcttgatgagcatgttgaggaactgcccc 355
Query: 795 tcgtcggcggaggtcgtcatcaggttccatgggtgcttggcggtgatctcgcggagctcc 854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 tcgtcggcggaggtcgtcatcaggttccatgggtgcttggcggtgatctcgcggagctcc 295
Query: 855 ttcatgctctccggctcccgcgggtacacgctcgtgtccaggatgtactggtagaggtcg 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 ttcatgctctccggctcccgcgggtacacgctcgtgtccaggatgtactggtagaggtcg 235
Query: 915 tcgctcttgagcaggctcttgtggccgacctcggagtgccgcgtcttctgctcgc----- 969
||||||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 234 tcgctcttgagcaggctcttgtgtccgacctcggagtggcgcgtcttctgctcgccgttg 175
Query: 970 -cgttgccgttggcctgctgctcctgcgccggc---gccgcctcggtcgccgtggtggcc 1025
|||||||||||||||||| | || |||| | | ||||||||||||||||||||||||
Sbjct: 174 gcgttgccgttggcctgctccgccggcgcggccttggccgcctcggtcgccgtggtggcc 115
Query: 1026 attgcgtgcagtg 1038
|||||| ||||||
Sbjct: 114 attgcgggcagtg 102
>gb|BI076233.1|BI076233 IP1_27_E07.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 526
Score = 682 bits (344), Expect = 0.0
Identities = 405/425 (95%), Gaps = 9/425 (2%)
Strand = Plus / Minus
Query: 623 gatgcagggcaggcccagctcgtagttctcgcggttgatgtccatggccaagatcgtgcc 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 gatgcagggcaggcccagctcgtagttctcgcggttgatgtccatggccaagatcgtgcc 467
Query: 683 gtcctccgggagggcgagcgccgtggcgaggagggagtagccggtgtagacgccgatctc 742
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gtcctccgggagagcgagcgcggtggcgaggagggagtagccggtgtagacgccgatctc 407
Query: 743 catggtcttcttggcgccgatgagcttgatgagcatgttcaggaactgcccctcgtcggc 802
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 406 catggtcttcttggcgccgatgagcttgatgagcatgttgaggaactgcccctcgtcggc 347
Query: 803 ggaggtcgtcatcaggttccatgggtgcttggcggtgatctcgcggagctccttcatgct 862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ggaggtcgtcatcaggttccatgggtgcttggcggtgatctcgcggagctccttcatgct 287
Query: 863 ctccggctcccgcgggtacacgctcgtgtccaggatgtactggtagaggtcgtcgctctt 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ctccggctcccgcgggtacacgctcgtgtccaggatgtactggtagaggtcgtcgctctt 227
Query: 923 gagcaggctcttgtggccgacctcggagtgccgcgtcttctgctcgc------cgttgcc 976
||||||||||||||| |||||||||||||| |||||||||||||||| |||||||
Sbjct: 226 gagcaggctcttgtgtccgacctcggagtggcgcgtcttctgctcgccgttggcgttgcc 167
Query: 977 gttggcctgctgctcctgcgccggc---gccgcctcggtcgccgtggtggccattgcgtg 1033
||||||||||| | || |||| | | |||||||||||||||||||||||||||||| |
Sbjct: 166 gttggcctgctccgccggcgcggccttggccgcctcggtcgccgtggtggccattgcggg 107
Query: 1034 cagtg 1038
|||||
Sbjct: 106 cagtg 102
>gb|CD429550.1|CD429550 ETH1_14_C02.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_14_C02_A002 3', mRNA sequence
Length = 604
Score = 680 bits (343), Expect = 0.0
Identities = 373/383 (97%)
Strand = Plus / Minus
Query: 248 ttttcacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctc 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ttttcacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctc 324
Query: 308 gacgcggtcgtcggcggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcg 367
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gacgcgctcgtcggcggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcg 264
Query: 368 gatgtacttgcgcatgggcgcgtcgtcggggagcacgacggagccgttccacagcgtgtt 427
|| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 263 gacgtacttgcgcatgggggcgtcgtcggggagcacgacagagccgttccacagcgtgtt 204
Query: 428 gtcgtagccgatgaggccgcccagcttcaccagcttcagcagccgctcgtggtagttgag 487
|||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 203 gtcgtagccgatgaggccccccagcttcaccagcttgagcagccggtcgtggtagttgag 144
Query: 488 gtagttgtccttgtcggcgtccacgaagacgaagtcgaacgacccgtggttcttctcctc 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 143 gtagttgtccttgtcggcgtccacgaagacgaagtcgaacgacccgtggttcttctcgtc 84
Query: 548 cgcgatgaggtcgtcgaggacggggagcgcgggaccctcgcggaagtcgatcttgtgggc 607
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 83 ggcgatgaggtcgtcgaggacggggagcgcggggccctcgcggaagtcgatcttgtgggc 24
Query: 608 gacgccggccttctcgatgcagg 630
|||||||||||||||||||||||
Sbjct: 23 gacgccggccttctcgatgcagg 1
Score = 60.0 bits (30), Expect = 5e-007
Identities = 70/80 (87%), Gaps = 5/80 (6%)
Strand = Plus / Minus
Query: 144 gccggtggataattaatgctgcgggtcgtcta--ttatgattggaat-gaggatgcggc- 199
||||||| ||||||||||||||| |||||||| ||||||||| || | |||||||||
Sbjct: 475 gccggtgaataattaatgctgcgcgtcgtctacgatatgattgggatgggggatgcggcg 416
Query: 200 -cggcggcgccgtcggtggc 218
|||||||||||||||||||
Sbjct: 415 gcggcggcgccgtcggtggc 396
>gb|CF432632.1|CF432632 NIT1_18_G06.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_18_G06_A002 3', mRNA sequence
Length = 610
Score = 674 bits (340), Expect = 0.0
Identities = 377/388 (97%), Gaps = 1/388 (0%)
Strand = Plus / Minus
Query: 248 ttttcacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctc 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ttttcacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctc 329
Query: 308 gacgcggtcgtcggcggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcg 367
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gacgcgctcgtcggcggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcg 269
Query: 368 gatgtacttgcgcatgggcgcgtcgtcggggagcacgacggagccgttccacagcgtgtt 427
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 268 gatgtacttgcgcatgggggcgtcgtcggggagcacgacagagccgttccacagcatgtt 209
Query: 428 gtcgtagccgatgaggccgcccagcttcaccagcttcagcagccgctcgt-ggtagttga 486
|||||||||||||||||| ||||||||||||||||| |||||||| |||| |||||||||
Sbjct: 208 gtcgtagccgatgaggccccccagcttcaccagcttgagcagccggtcgtgggtagttga 149
Query: 487 ggtagttgtccttgtcggcgtccacgaagacgaagtcgaacgacccgtggttcttctcct 546
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 148 ggtagttgtccttgtcggcgtccacgaagacgaagtcgaacgacccgtggttcttctcgt 89
Query: 547 ccgcgatgaggtcgtcgaggacggggagcgcgggaccctcgcggaagtcgatcttgtggg 606
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 88 cggcgatgaggtcgtcgaggacggggagcgcggggccctcgcggaagtcgatcttgtggg 29
Query: 607 cgacgccggccttctcgatgcagggcag 634
||||||||||||||||||||||||||||
Sbjct: 28 cgacgccggccttctcgatgcagggcag 1
Score = 60.0 bits (30), Expect = 5e-007
Identities = 70/80 (87%), Gaps = 5/80 (6%)
Strand = Plus / Minus
Query: 144 gccggtggataattaatgctgcgggtcgtcta--ttatgattggaat-gaggatgcggc- 199
||||||| ||||||||||||||| |||||||| ||||||||| || | |||||||||
Sbjct: 480 gccggtgaataattaatgctgcgcgtcgtctacgatatgattgggatgggggatgcggcg 421
Query: 200 -cggcggcgccgtcggtggc 218
|||||||||||||||||||
Sbjct: 420 gcggcggcgccgtcggtggc 401
>gb|BG465738.1|BG465738 RHIZ2_48_A08.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 519
Score = 670 bits (338), Expect = 0.0
Identities = 399/419 (95%), Gaps = 9/419 (2%)
Strand = Plus / Minus
Query: 623 gatgcagggcaggcccagctcgtagttctcgcggttgatgtccatggccaagatcgtgcc 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gatgcagggcaggcccagctcgtagttctcgcggttgatgtccatggccaagatcgtgcc 460
Query: 683 gtcctccgggagggcgagcgccgtggcgaggagggagtagccggtgtagacgccgatctc 742
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 459 gtcctccgggagagcgagcgcggtggcgaggagggagtagccggtgtagacgccgatctc 400
Query: 743 catggtcttcttggcgccgatgagcttgatgagcatgttcaggaactgcccctcgtcggc 802
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 399 catggtcttcttggcgccgatgagcttgatgagcatgttgaggaactgcccctcgtcggc 340
Query: 803 ggaggtcgtcatcaggttccatgggtgcttggcggtgatctcgcggagctccttcatgct 862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ggaggtcgtcatcaggttccatgggtgcttggcggtgatctcgcggagctccttcatgct 280
Query: 863 ctccggctcccgcgggtacacgctcgtgtccaggatgtactggtagaggtcgtcgctctt 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 ctccggctcccgcgggtacacgctcgtgtccaggatgtactggtagaggtcgtcgctctt 220
Query: 923 gagcaggctcttgtggccgacctcggagtgccgcgtcttctgctcgccgttgccgttggc 982
||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||
Sbjct: 219 gagcaggctcttgtgtccgacctcggagtggcgcgtcttctgctcgccgt------tggc 166
Query: 983 ctgctgctcctgcgccggc---gccgcctcggtcgccgtggtggccattgcgtgcagtg 1038
||||| | || |||| | | |||||||||||||||||||||||||||||| ||||||
Sbjct: 165 ctgctccgccggcgcggccttggccgcctcggtcgccgtggtggccattgcgggcagtg 107
>gb|CF427166.1|CF427166 PH1_4_H04.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_4_H04_A002 3', mRNA sequence
Length = 573
Score = 638 bits (322), Expect = 0.0
Identities = 349/358 (97%)
Strand = Plus / Minus
Query: 248 ttttcacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctc 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ttttcacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctc 299
Query: 308 gacgcggtcgtcggcggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcg 367
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gacgcgctcgtcggcggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcg 239
Query: 368 gatgtacttgcgcatgggcgcgtcgtcggggagcacgacggagccgttccacagcgtgtt 427
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 238 gatgtacttgcgcatgggggcgtcgtcggggagcacgacagagccgttccacagcgtgtt 179
Query: 428 gtcgtagccgatgaggccgcccagcttcaccagcttcagcagccgctcgtggtagttgag 487
|||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 178 gtcgtagccgatgaggccccccagcttcaccagcttgagcagccggtcgtggtagttgag 119
Query: 488 gtagttgtccttgtcggcgtccacgaagacgaagtcgaacgacccgtggttcttctcctc 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 118 gtagttgtccttgtcggcgtccacgaagacgaagtcgaacgacccgtggttcttctcgtc 59
Query: 548 cgcgatgaggtcgtcgaggacggggagcgcgggaccctcgcggaagtcgatcttgtgg 605
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 58 ggcgatgaggtcgtcgaggacggggagcgcggggccctcgcggaagtcgatcttgtgg 1
Score = 60.0 bits (30), Expect = 5e-007
Identities = 70/80 (87%), Gaps = 5/80 (6%)
Strand = Plus / Minus
Query: 144 gccggtggataattaatgctgcgggtcgtcta--ttatgattggaat-gaggatgcggc- 199
||||||| ||||||||||||||| |||||||| ||||||||| || | |||||||||
Sbjct: 450 gccggtgaataattaatgctgcgcgtcgtctacgatatgattgggatgggggatgcggcg 391
Query: 200 -cggcggcgccgtcggtggc 218
|||||||||||||||||||
Sbjct: 390 gcggcggcgccgtcggtggc 371
>gb|BE360322.1|BE360322 DG1_62_C12.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 572
Score = 624 bits (315), Expect = e-177
Identities = 342/351 (97%)
Strand = Plus / Minus
Query: 248 ttttcacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctc 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ttttcacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctc 292
Query: 308 gacgcggtcgtcggcggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcg 367
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 gacgcgctcgtcggcggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcg 232
Query: 368 gatgtacttgcgcatgggcgcgtcgtcggggagcacgacggagccgttccacagcgtgtt 427
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 231 gatgtacttgcgcatgggggcgtcgtcggggagcacgacagagccgttccacagcgtgtt 172
Query: 428 gtcgtagccgatgaggccgcccagcttcaccagcttcagcagccgctcgtggtagttgag 487
|||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 171 gtcgtagccgatgaggccccccagcttcaccagcttgagcagccggtcgtggtagttgag 112
Query: 488 gtagttgtccttgtcggcgtccacgaagacgaagtcgaacgacccgtggttcttctcctc 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 111 gtagttgtccttgtcggcgtccacgaagacgaagtcgaacgacccgtggttcttctcgtc 52
Query: 548 cgcgatgaggtcgtcgaggacggggagcgcgggaccctcgcggaagtcgat 598
|||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 51 ggcgatgaggtcgtcgaggacggggagcgcggggccctcgcggaagtcgat 1
Score = 60.0 bits (30), Expect = 5e-007
Identities = 70/80 (87%), Gaps = 5/80 (6%)
Strand = Plus / Minus
Query: 144 gccggtggataattaatgctgcgggtcgtcta--ttatgattggaat-gaggatgcggc- 199
||||||| ||||||||||||||| |||||||| ||||||||| || | |||||||||
Sbjct: 443 gccggtgaataattaatgctgcgcgtcgtctacgatatgattgggatgggggatgcggcg 384
Query: 200 -cggcggcgccgtcggtggc 218
|||||||||||||||||||
Sbjct: 383 gcggcggcgccgtcggtggc 364
>gb|CN132666.1|CN132666 OX1_7_B07.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_7_B07_A002 5', mRNA sequence
Length = 773
Score = 605 bits (305), Expect = e-171
Identities = 366/386 (94%), Gaps = 9/386 (2%)
Strand = Plus / Minus
Query: 662 gtccatggccaagatcgtgccgtcctccgggagggcgagcgccgtggcgaggagggagta 721
||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 496 gtccatggccaagatcgtgccgtcctccgggagagcgagcgcggtggcgaggagggagta 437
Query: 722 gccggtgtagacgccgatctccatggtcttcttggcgccgatgagcttgatgagcatgtt 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gccggtgtagacgccgatctccatggtcttcttggcgccgatgagcttgatgagcatgtt 377
Query: 782 caggaactgcccctcgtcggcggaggtcgtcatcaggttccatgggtgcttggcggtgat 841
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gaggaactgcccctcgtcggcggaggtcgtcatcaggttccatgggtgcttggcggtgat 317
Query: 842 ctcgcggagctccttcatgctctccggctcccgcgggtacacgctcgtgtccaggatgta 901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ctcgcggagctccttcatgctctccggctcccgcgggtacacgctcgtgtccaggatgta 257
Query: 902 ctggtagaggtcgtcgctcttgagcaggctcttgtggccgacctcggagtgccgcgtctt 961
|||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 256 ctggtagaggtcgtcgctcttgagcaggctcttgtgtccgacctcggagtggcgcgtctt 197
Query: 962 ctgctcgc------cgttgccgttggcctgctgctcctgcgccggc---gccgcctcggt 1012
|||||||| |||||||||||||||||| | || |||| | | |||||||||||
Sbjct: 196 ctgctcgccgttggcgttgccgttggcctgctccgccggcgcggccttggccgcctcggt 137
Query: 1013 cgccgtggtggccattgcgtgcagtg 1038
||||||||||||||||||| ||||||
Sbjct: 136 cgccgtggtggccattgcgggcagtg 111
Score = 474 bits (239), Expect = e-132
Identities = 257/263 (97%)
Strand = Plus / Minus
Query: 248 ttttcacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctc 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 ttttcacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctc 695
Query: 308 gacgcggtcgtcggcggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcg 367
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 gacgcgctcgtcggcggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcg 635
Query: 368 gatgtacttgcgcatgggcgcgtcgtcggggagcacgacggagccgttccacagcgtgtt 427
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 634 gatgtacttgcgcatgggggcgtcgtcggggagcacgacagagccgttccacagcgtgtt 575
Query: 428 gtcgtagccgatgaggccgcccagcttcaccagcttcagcagccgctcgtggtagttgag 487
|||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 574 gtcgtagccgatgaggccccccagcttcaccagcttgagcagccggtcgtggtagttgag 515
Query: 488 gtagttgtccttgtcggcgtcca 510
|||||||||||||||||||||||
Sbjct: 514 gtagttgtccttgtcggcgtcca 492
>gb|BG947952.1|BG947952 IP1_7_E07.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 468
Score = 567 bits (286), Expect = e-160
Identities = 347/367 (94%), Gaps = 9/367 (2%)
Strand = Plus / Minus
Query: 681 ccgtcctccgggagggcgagcgccgtggcgaggagggagtagccggtgtagacgccgatc 740
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 468 ccgtcctccgggagagcgagcgcggtggcgaggagggagtagccggtgtagacgccgatc 409
Query: 741 tccatggtcttcttggcgccgatgagcttgatgagcatgttcaggaactgcccctcgtcg 800
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 408 tccatggtcttcttggcgccgatgagcttgatgagcatgttgaggaactgcccctcgtcg 349
Query: 801 gcggaggtcgtcatcaggttccatgggtgcttggcggtgatctcgcggagctccttcatg 860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 gcggaggtcgtcatcaggttccatgggtgcttggcggtgatctcgcggagctccttcatg 289
Query: 861 ctctccggctcccgcgggtacacgctcgtgtccaggatgtactggtagaggtcgtcgctc 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 ctctccggctcccgcgggtacacgctcgtgtccaggatgtactggtagaggtcgtcgctc 229
Query: 921 ttgagcaggctcttgtggccgacctcggagtgccgcgtcttctgctcgc------cgttg 974
||||||||||||||||| |||||||||||||| |||||||||||||||| |||||
Sbjct: 228 ttgagcaggctcttgtgtccgacctcggagtggcgcgtcttctgctcgccgttggcgttg 169
Query: 975 ccgttggcctgctgctcctgcgccggc---gccgcctcggtcgccgtggtggccattgcg 1031
||||||||||||| | || |||| | | ||||||||||||||||||||||||||||||
Sbjct: 168 ccgttggcctgctccgccggcgcggccttggccgcctcggtcgccgtggtggccattgcg 109
Query: 1032 tgcagtg 1038
||||||
Sbjct: 108 ggcagtg 102
>gb|CW265394.1|CW265394 104_734_11231851_148_35263_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11231851, DNA
sequence
Length = 649
Score = 545 bits (275), Expect = e-153
Identities = 293/299 (97%)
Strand = Plus / Plus
Query: 248 ttttcacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctc 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 ttttcacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctc 208
Query: 308 gacgcggtcgtcggcggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcg 367
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gacgcgctcgtcggcggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcg 268
Query: 368 gatgtacttgcgcatgggcgcgtcgtcggggagcacgacggagccgttccacagcgtgtt 427
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 269 gatgtacttgcgcatgggggcgtcgtcggggagcacgacagagccgttccacagcgtgtt 328
Query: 428 gtcgtagccgatgaggccgcccagcttcaccagcttcagcagccgctcgtggtagttgag 487
|||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 329 gtcgtagccgatgaggccccccagcttcaccagcttgagcagccggtcgtggtagttgag 388
Query: 488 gtagttgtccttgtcggcgtccacgaagacgaagtcgaacgacccgtggttcttctcct 546
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gtagttgtccttgtcggcgtccacgaagacgaagtcgaacgacccgtggttcttctcct 447
Score = 228 bits (115), Expect = 9e-058
Identities = 118/119 (99%)
Strand = Plus / Plus
Query: 549 gcgatgaggtcgtcgaggacggggagcgcgggaccctcgcggaagtcgatcttgtgggcg 608
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 531 gcgatgaggtcgtcgaggacggggagcgcggggccctcgcggaagtcgatcttgtgggcg 590
Query: 609 acgccggccttctcgatgcagggcaggcccagctcgtagttctcgcggttgatgtccat 667
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 acgccggccttctcgatgcagggcaggcccagctcgtagttctcgcggttgatgtccat 649
Score = 60.0 bits (30), Expect = 5e-007
Identities = 70/80 (87%), Gaps = 5/80 (6%)
Strand = Plus / Plus
Query: 144 gccggtggataattaatgctgcgggtcgtcta--ttatgattggaat-gaggatgcggc- 199
||||||| ||||||||||||||| |||||||| ||||||||| || | |||||||||
Sbjct: 57 gccggtgaataattaatgctgcgcgtcgtctacgatatgattgggatgggggatgcggcg 116
Query: 200 -cggcggcgccgtcggtggc 218
|||||||||||||||||||
Sbjct: 117 gcggcggcgccgtcggtggc 136
>gb|BE360918.1|BE360918 DG1_67_F09.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 586
Score = 541 bits (273), Expect = e-152
Identities = 291/297 (97%)
Strand = Plus / Minus
Query: 248 ttttcacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctc 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttcacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctc 322
Query: 308 gacgcggtcgtcggcggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcg 367
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gacgcgctcgtcggcggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcg 262
Query: 368 gatgtacttgcgcatgggcgcgtcgtcggggagcacgacggagccgttccacagcgtgtt 427
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 261 gatgtacttgcgcatgggggcgtcgtcggggagcacgacagagccgttccacagcgtgtt 202
Query: 428 gtcgtagccgatgaggccgcccagcttcaccagcttcagcagccgctcgtggtagttgag 487
|||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 201 gtcgtagccgatgaggccccccagcttcaccagcttgagcagccggtcgtggtagttgag 142
Query: 488 gtagttgtccttgtcggcgtccacgaagacgaagtcgaacgacccgtggttcttctc 544
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 gtagttgtccttgtcggcgtccacgaagacgaagtcgaacgacccgtggttcttctc 85
Score = 60.0 bits (30), Expect = 5e-007
Identities = 70/80 (87%), Gaps = 5/80 (6%)
Strand = Plus / Minus
Query: 144 gccggtggataattaatgctgcgggtcgtcta--ttatgattggaat-gaggatgcggc- 199
||||||| ||||||||||||||| |||||||| ||||||||| || | |||||||||
Sbjct: 473 gccggtgaataattaatgctgcgcgtcgtctacgatatgattgggatgggggatgcggcg 414
Query: 200 -cggcggcgccgtcggtggc 218
|||||||||||||||||||
Sbjct: 413 gcggcggcgccgtcggtggc 394
Score = 58.0 bits (29), Expect = 2e-006
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 794 ctcgtcggcggaggtcgtcatcaggttcc 822
|||||||||||||||||||||||||||||
Sbjct: 87 ctcgtcggcggaggtcgtcatcaggttcc 59
>gb|CD229128.1|CD229128 CCC1_13_F11.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_13_F11_A007 3', mRNA sequence
Length = 542
Score = 541 bits (273), Expect = e-152
Identities = 291/297 (97%)
Strand = Plus / Minus
Query: 248 ttttcacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctc 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ttttcacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctc 245
Query: 308 gacgcggtcgtcggcggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcg 367
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gacgcgctcgtcggcggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcg 185
Query: 368 gatgtacttgcgcatgggcgcgtcgtcggggagcacgacggagccgttccacagcgtgtt 427
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 184 gatgtacttgcgcatgggggcgtcgtcggggagcacgacagagccgttccacagcgtgtt 125
Query: 428 gtcgtagccgatgaggccgcccagcttcaccagcttcagcagccgctcgtggtagttgag 487
|||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 124 gtcgtagccgatgaggccccccagcttcaccagcttgagcagccggtcgtggtagttgag 65
Query: 488 gtagttgtccttgtcggcgtccacgaagacgaagtcgaacgacccgtggttcttctc 544
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 gtagttgtccttgtcggcgtccacgaagacgaagtcgaacgacccgtggttcttctc 8
Score = 60.0 bits (30), Expect = 5e-007
Identities = 70/80 (87%), Gaps = 5/80 (6%)
Strand = Plus / Minus
Query: 144 gccggtggataattaatgctgcgggtcgtcta--ttatgattggaat-gaggatgcggc- 199
||||||| ||||||||||||||| |||||||| ||||||||| || | |||||||||
Sbjct: 396 gccggtgaataattaatgctgcgcgtcgtctacgatatgattgggatgggggatgcggcg 337
Query: 200 -cggcggcgccgtcggtggc 218
|||||||||||||||||||
Sbjct: 336 gcggcggcgccgtcggtggc 317
>gb|BG559522.1|BG559522 RHIZ2_55_G08.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 439
Score = 517 bits (261), Expect = e-145
Identities = 316/334 (94%), Gaps = 9/334 (2%)
Strand = Plus / Minus
Query: 708 gcgaggagggagtagccggtgtagacgccgatctccatggtcttcttggcgccgatgagc 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gcgaggagggagtagccggtgtagacgccgatctccatggtcttcttggcgccgatgagc 380
Query: 768 ttgatgagcatgttcaggaactgcccctcgtcggcggaggtcgtcatcaggttccatggg 827
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ttgatgagcatgttgaggaactgcccctcgtcggcggaggtcgtcatcaggttccatggg 320
Query: 828 tgcttggcggtgatctcgcggagctccttcatgctctccggctcccgcgggtacacgctc 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tgcttggcggtgatctcgcggagctccttcatgctctccggctcccgcgggtacacgctc 260
Query: 888 gtgtccaggatgtactggtagaggtcgtcgctcttgagcaggctcttgtggccgacctcg 947
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 259 gtgtccaggatgtactggtagaggtcgtcgctcttgagcaggctcttgtgtccgacctcg 200
Query: 948 gagtgccgcgtcttctgctcgccgttgccgttggcctgctgctcctgcgccggc---gcc 1004
||||| ||||||||||||||||||| ||||||||| | || |||| | | |||
Sbjct: 199 gagtggcgcgtcttctgctcgccgt------tggcctgctccgccggcgcggccttggcc 146
Query: 1005 gcctcggtcgccgtggtggccattgcgtgcagtg 1038
||||||||||||||||||||||||||| ||||||
Sbjct: 145 gcctcggtcgccgtggtggccattgcgggcagtg 112
>gb|BE363151.1|BE363151 DG1_9_E08.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 440
Score = 478 bits (241), Expect = e-133
Identities = 259/265 (97%)
Strand = Plus / Minus
Query: 280 cgtcgccgacggggagctggcagatctcgacgcggtcgtcggcggcgagcgccttgttga 339
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 440 cgtcgccgacggggagctggcagatctcgacgcgctcgtcggcggcgagcgccttgttga 381
Query: 340 ggacgagcacgaagtcgcggtagaagcggatgtacttgcgcatgggcgcgtcgtcgggga 399
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 380 ggacgagcacgaagtcgcggtagaagcggatgtacttgcgcatgggggcgtcgtcgggga 321
Query: 400 gcacgacggagccgttccacagcgtgttgtcgtagccgatgaggccgcccagcttcacca 459
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 320 gcacgacagagccgttccacagcgtgttgtcgtagccgatgaggccccccagcttcacca 261
Query: 460 gcttcagcagccgctcgtggtagttgaggtagttgtccttgtcggcgtccacgaagacga 519
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gcttgagcagccggtcgtggtagttgaggtagttgtccttgtcggcgtccacgaagacga 201
Query: 520 agtcgaacgacccgtggttcttctc 544
|||||||||||||||||||||||||
Sbjct: 200 agtcgaacgacccgtggttcttctc 176
Score = 97.6 bits (49), Expect = 2e-018
Identities = 49/49 (100%)
Strand = Plus / Minus
Query: 821 ccatgggtgcttggcggtgatctcgcggagctccttcatgctctccggc 869
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 ccatgggtgcttggcggtgatctcgcggagctccttcatgctctccggc 1
Score = 58.0 bits (29), Expect = 2e-006
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 794 ctcgtcggcggaggtcgtcatcaggttcc 822
|||||||||||||||||||||||||||||
Sbjct: 178 ctcgtcggcggaggtcgtcatcaggttcc 150
>gb|AW282821.1|AW282821 LG1_305_H12.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 464
Score = 462 bits (233), Expect = e-128
Identities = 251/257 (97%)
Strand = Plus / Minus
Query: 248 ttttcacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctc 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ttttcacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctc 198
Query: 308 gacgcggtcgtcggcggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcg 367
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 gacgcgctcgtcggcggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcg 138
Query: 368 gatgtacttgcgcatgggcgcgtcgtcggggagcacgacggagccgttccacagcgtgtt 427
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 137 gatgtacttgcgcatgggggcgtcgtcggggagcacgacagagccgttccacagcgtgtt 78
Query: 428 gtcgtagccgatgaggccgcccagcttcaccagcttcagcagccgctcgtggtagttgag 487
|||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 77 gtcgtagccgatgaggccccccagcttcaccagcttgagcagccggtcgtggtagttgag 18
Query: 488 gtagttgtccttgtcgg 504
|||||||||||||||||
Sbjct: 17 gtagttgtccttgtcgg 1
Score = 60.0 bits (30), Expect = 5e-007
Identities = 70/80 (87%), Gaps = 5/80 (6%)
Strand = Plus / Minus
Query: 144 gccggtggataattaatgctgcgggtcgtcta--ttatgattggaat-gaggatgcggc- 199
||||||| ||||||||||||||| |||||||| ||||||||| || | |||||||||
Sbjct: 349 gccggtgaataattaatgctgcgcgtcgtctacgatatgattgggatgggggatgcggcg 290
Query: 200 -cggcggcgccgtcggtggc 218
|||||||||||||||||||
Sbjct: 289 gcggcggcgccgtcggtggc 270
>gb|BG466056.1|BG466056 RHIZ2_48_A08.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 512
Score = 460 bits (232), Expect = e-127
Identities = 253/260 (97%)
Strand = Plus / Minus
Query: 248 ttttcacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctc 307
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 260 ttttcacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcaaatctc 201
Query: 308 gacgcggtcgtcggcggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcg 367
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 gacgcgctcgtcgggggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcg 141
Query: 368 gatgtacttgcgcatgggcgcgtcgtcggggagcacgacggagccgttccacagcgtgtt 427
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 gatgtacttgcgcatgggggcgtcgtcggggagcacgacggagccgttccacagcgtgtt 81
Query: 428 gtcgtagccgatgaggccgcccagcttcaccagcttcagcagccgctcgtggtagttgag 487
|||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 80 gtcgtagccgatgaggccccccagcttcaccagcttgagcagccgctcggggtagttgag 21
Query: 488 gtagttgtccttgtcggcgt 507
||||||||||||||||||||
Sbjct: 20 gtagttgtccttgtcggcgt 1
Score = 60.0 bits (30), Expect = 5e-007
Identities = 70/80 (87%), Gaps = 5/80 (6%)
Strand = Plus / Minus
Query: 144 gccggtggataattaatgctgcgggtcgtcta--ttatgattggaat-gaggatgcggc- 199
||||||| ||||||||||||||| |||||||| ||||||||| || | |||||||||
Sbjct: 358 gccggtgaataattaatgctgcgcgtcgtctacgatatgattgggatgggggatgcggcg 299
Query: 200 -cggcggcgccgtcggtggc 218
|||||||||||||||||||
Sbjct: 298 gcggcggcgccgtcggtggc 279
Score = 44.1 bits (22), Expect = 0.027
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 109 aaagattacaggggcaagaaagagcc 134
||||||||||||| ||||||||||||
Sbjct: 397 aaagattacagggccaagaaagagcc 372
>gb|BI098963.1|BI098963 IP1_35_E08.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 406
Score = 450 bits (227), Expect = e-124
Identities = 282/300 (94%), Gaps = 9/300 (3%)
Strand = Plus / Minus
Query: 748 tcttcttggcgccgatgagcttgatgagcatgttcaggaactgcccctcgtcggcggagg 807
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 406 tcttcttggcgccgatgagcttgatgagcatgttgaggaactgcccctcgtcggcggagg 347
Query: 808 tcgtcatcaggttccatgggtgcttggcggtgatctcgcggagctccttcatgctctccg 867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 tcgtcatcaggttccatgggtgcttggcggtgatctcgcggagctccttcatgctctccg 287
Query: 868 gctcccgcgggtacacgctcgtgtccaggatgtactggtagaggtcgtcgctcttgagca 927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gctcccgcgggtacacgctcgtgtccaggatgtactggtagaggtcgtcgctcttgagca 227
Query: 928 ggctcttgtggccgacctcggagtgccgcgtcttctgctcgc------cgttgccgttgg 981
|||||||||| |||||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 226 ggctcttgtgtccgacctcggagtggcgcgtcttctgctcgccgttggcgttgccgttgg 167
Query: 982 cctgctgctcctgcgccggc---gccgcctcggtcgccgtggtggccattgcgtgcagtg 1038
|||||| | || |||| | | |||||||||||||||||||||||||||||| ||||||
Sbjct: 166 cctgctccgccggcgcggccttggccgcctcggtcgccgtggtggccattgcgggcagtg 107
>gb|BE358306.1|BE358306 DG1_27_D04.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 410
Score = 438 bits (221), Expect = e-121
Identities = 281/301 (93%), Gaps = 9/301 (2%)
Strand = Plus / Minus
Query: 747 gtcttcttggcgccgatgagcttgatgagcatgttcaggaactgcccctcgtcggcggag 806
||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 407 gtcttcttggcgccgatgagcttgatgagcatgttgagnaactgcccctcgtcggcggag 348
Query: 807 gtcgtcatcaggttccatgggtgcttggcggtgatctcgcggagctccttcatgctctcc 866
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 347 gtcgtcatcaggttccatgggtgcttggcggtgatctcgcggagctcattcatgctctcc 288
Query: 867 ggctcccgcgggtacacgctcgtgtccaggatgtactggtagaggtcgtcgctcttgagc 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 ggctcccgcgggtacacgctcgtgtccaggatgtactggtagaggtcgtcgctcttgagc 228
Query: 927 aggctcttgtggccgacctcggagtgccgcgtcttctgctcgc------cgttgccgttg 980
||||||||||| |||||||||||||| |||||||||||||||| |||||||||||
Sbjct: 227 aggctcttgtgtccgacctcggagtggcgcgtcttctgctcgccgttggcgttgccgttg 168
Query: 981 gcctgctgctcctgcgccggc---gccgcctcggtcgccgtggtggccattgcgtgcagt 1037
||||||| | || |||| | | |||||||||||||||||||||||||||||| |||||
Sbjct: 167 gcctgctccgccggcgcggccttggccgcctcggtcgccgtggtggccattgcgggcagt 108
Query: 1038 g 1038
|
Sbjct: 107 g 107
>gb|BI099425.1|BI099425 IP1_41_H11.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 495
Score = 424 bits (214), Expect = e-117
Identities = 232/238 (97%)
Strand = Plus / Minus
Query: 248 ttttcacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctc 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 ttttcacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctc 179
Query: 308 gacgcggtcgtcggcggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcg 367
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 gacgcgctcgtcggcggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcg 119
Query: 368 gatgtacttgcgcatgggcgcgtcgtcggggagcacgacggagccgttccacagcgtgtt 427
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 118 gatgtacttgcgcatgggggcgtcgtcggggagcacgacagagccgttccacagcgtgtt 59
Query: 428 gtcgtagccgatgaggccgcccagcttcaccagcttcagcagccgctcgtggtagttg 485
|||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||
Sbjct: 58 gtcgtagccgatgaggccccccagcttcaccagcttgagcagccggtcgtggtagttg 1
Score = 52.0 bits (26), Expect = 1e-004
Identities = 69/80 (86%), Gaps = 5/80 (6%)
Strand = Plus / Minus
Query: 144 gccggtggataattaatgctgcgggtcgtcta--ttatgattggaat-gaggatgcggc- 199
||||||| ||||||||||||||| |||||||| ||||||||| || | |||||||||
Sbjct: 330 gccggtgaataattaatgctgcgcgtcgtctaccatatgattgggatgggggatgcggcg 271
Query: 200 -cggcggcgccgtcggtggc 218
|||||||||| ||||||||
Sbjct: 270 gcggcggcgccctcggtggc 251
>gb|BI351083.1|BI351083 IP1_69_F01.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 454
Score = 410 bits (207), Expect = e-112
Identities = 225/231 (97%)
Strand = Plus / Minus
Query: 248 ttttcacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctc 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 ttttcacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctc 172
Query: 308 gacgcggtcgtcggcggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcg 367
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 gacgcgctcgtcggcggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcg 112
Query: 368 gatgtacttgcgcatgggcgcgtcgtcggggagcacgacggagccgttccacagcgtgtt 427
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 111 gatgtacttgcgcatgggggcgtcgtcggggagcacgacagagccgttccacagcgtgtt 52
Query: 428 gtcgtagccgatgaggccgcccagcttcaccagcttcagcagccgctcgtg 478
|||||||||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 51 gtcgtagccgatgaggccccccagcttcaccagcttgagcagccggtcgtg 1
Score = 60.0 bits (30), Expect = 5e-007
Identities = 70/80 (87%), Gaps = 5/80 (6%)
Strand = Plus / Minus
Query: 144 gccggtggataattaatgctgcgggtcgtcta--ttatgattggaat-gaggatgcggc- 199
||||||| ||||||||||||||| |||||||| ||||||||| || | |||||||||
Sbjct: 323 gccggtgaataattaatgctgcgcgtcgtctacgatatgattgggatgggggatgcggcg 264
Query: 200 -cggcggcgccgtcggtggc 218
|||||||||||||||||||
Sbjct: 263 gcggcggcgccgtcggtggc 244
Score = 44.1 bits (22), Expect = 0.027
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 109 aaagattacaggggcaagaaagagcc 134
||||||||||||| ||||||||||||
Sbjct: 360 aaagattacagggccaagaaagagcc 335
>gb|CD229877.1|CD229877 CCC1_20_D09.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_20_D09_A007 5', mRNA sequence
Length = 665
Score = 408 bits (206), Expect = e-112
Identities = 261/279 (93%), Gaps = 9/279 (3%)
Strand = Plus / Minus
Query: 769 tgatgagcatgttcaggaactgcccctcgtcggcggaggtcgtcatcaggttccatgggt 828
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 tgatgagcatgttgaggaactgcccctcgtcggcggaggtcgtcatcaggttccatgggt 606
Query: 829 gcttggcggtgatctcgcggagctccttcatgctctccggctcccgcgggtacacgctcg 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 gcttggcggtgatctcgcggagctccttcatgctctccggctcccgcgggtacacgctcg 546
Query: 889 tgtccaggatgtactggtagaggtcgtcgctcttgagcaggctcttgtggccgacctcgg 948
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 545 tgtccaggatgtactggtagaggtcgtcgctcttgagcaggctcttgtgtccgacctcgg 486
Query: 949 agtgccgcgtcttctgctcgc------cgttgccgttggcctgctgctcctgcgccggc- 1001
|||| |||||||||||||||| |||||||||||||||||| | || |||| | |
Sbjct: 485 agtggcgcgtcttctgctcgccgttggcgttgccgttggcctgctccgccggcgcggcct 426
Query: 1002 --gccgcctcggtcgccgtggtggccattgcgtgcagtg 1038
|||||||||||||||||||||||||||||| ||||||
Sbjct: 425 tggccgcctcggtcgccgtggtggccattgcgggcagtg 387
>gb|BI098677.1|BI098677 IP1_35_E08.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 414
Score = 355 bits (179), Expect = 6e-096
Identities = 188/191 (98%)
Strand = Plus / Minus
Query: 248 ttttcacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctc 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 ttttcacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctc 132
Query: 308 gacgcggtcgtcggcggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcg 367
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 gacgcgctcgtcggcggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcg 72
Query: 368 gatgtacttgcgcatgggcgcgtcgtcggggagcacgacggagccgttccacagcgtgtt 427
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 71 gatgtacttgcgcatgggggcgtcgtcggggagcacgacagagccgttccacagcgtgtt 12
Query: 428 gtcgtagccga 438
|||||||||||
Sbjct: 11 gtcgtagccga 1
Score = 60.0 bits (30), Expect = 5e-007
Identities = 70/80 (87%), Gaps = 5/80 (6%)
Strand = Plus / Minus
Query: 144 gccggtggataattaatgctgcgggtcgtcta--ttatgattggaat-gaggatgcggc- 199
||||||| ||||||||||||||| |||||||| ||||||||| || | |||||||||
Sbjct: 283 gccggtgaataattaatgctgcgcgtcgtctacgatatgattgggatgggggatgcggcg 224
Query: 200 -cggcggcgccgtcggtggc 218
|||||||||||||||||||
Sbjct: 223 gcggcggcgccgtcggtggc 204
Score = 44.1 bits (22), Expect = 0.027
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 109 aaagattacaggggcaagaaagagcc 134
||||||||||||| ||||||||||||
Sbjct: 320 aaagattacagggccaagaaagagcc 295
>gb|BG104126.1|BG104126 RHIZ2_40_H02.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 348
Score = 323 bits (163), Expect = 2e-086
Identities = 221/239 (92%), Gaps = 11/239 (4%)
Strand = Plus / Minus
Query: 805 aggtcgtcatcaggttccatgggtgcttggcggtgatctcgcggagctccttcatgctct 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 aggtcgtcatcaggttccatgggtgcttggcggtgatctcgcggagctccttcatgctct 289
Query: 865 ccggctcccgcgggtacacgctcgtgtccaggatgtactggtagaggtcgtcgctcttga 924
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 288 ccggctcccgcgggtacacgctcgtgtccaggatgtactggtagaggttgtcgctcttga 229
Query: 925 gcaggctcttgtggccgacctcggagtgccgcgtcttctgctcgccgttgccgttggcct 984
||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 228 gcaggctcttgtgtccgacctcggagtggcgcgtcttctgctcgcc------gttggcct 175
Query: 985 gctgctcctgcgccggc----gccgcctcggtcgccgtggtggccattgcgtgcagtgt 1039
||| | || |||| ||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 174 gctccgccggcgc-ggcattggccgcctcggtcgccgtggtggccattgcgggcagtgt 117
>gb|BE360832.1|BE360832 DG1_67_F09.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 621
Score = 313 bits (158), Expect = 2e-083
Identities = 173/178 (97%)
Strand = Plus / Minus
Query: 367 ggatgtacttgcgcatgggcgcgtcgtcggggagcacgacggagccgttccacagcgtgt 426
||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 621 ggatgtacttgcgcatgggggcgtcgtcggggagcacgacagagccgttccacagcgtgt 562
Query: 427 tgtcgtagccgatgaggccgcccagcttcaccagcttcagcagccgctcgtggtagttga 486
||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||
Sbjct: 561 tgtcgtagccgatgaggccccccagcttcaccagcttgagcagccggtcgtggtagttga 502
Query: 487 ggtagttgtccttgtcggcgtccacgaagacgaagtcgaacgacccgtggttcttctc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggtagttgtccttgtcggcgtccacgaagacgaagtcgaacgacccgtggttcttctc 444
Score = 313 bits (158), Expect = 2e-083
Identities = 210/227 (92%), Gaps = 9/227 (3%)
Strand = Plus / Minus
Query: 821 ccatgggtgcttggcggtgatctcgcggagctccttcatgctctccggctcccgcgggta 880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ccatgggtgcttggcggtgatctcgcggagctccttcatgctctccggctcccgcgggta 258
Query: 881 cacgctcgtgtccaggatgtactggtagaggtcgtcgctcttgagcaggctcttgtggcc 940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 257 cacgctcgtgtccaggatgtactggtagaggtcgtcgctcttgagcaggctcttgtgtcc 198
Query: 941 gacctcggagtgccgcgtcttctgctcgc------cgttgccgttggcctgctgctcctg 994
|||||||||||| |||||||||||||||| |||||||||||||||||| | || |
Sbjct: 197 gacctcggagtggcgcgtcttctgctcgccgttggcgttgccgttggcctgctccgccgg 138
Query: 995 cgccggc---gccgcctcggtcgccgtggtggccattgcgtgcagtg 1038
||| | | |||||||||||||||||||||||||||||| ||||||
Sbjct: 137 cgcggccttggccgcctcggtcgccgtggtggccattgcgggcagtg 91
Score = 58.0 bits (29), Expect = 2e-006
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 794 ctcgtcggcggaggtcgtcatcaggttcc 822
|||||||||||||||||||||||||||||
Sbjct: 446 ctcgtcggcggaggtcgtcatcaggttcc 418
>gb|BE363067.1|BE363067 DG1_9_E08.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 548
Score = 313 bits (158), Expect = 2e-083
Identities = 210/227 (92%), Gaps = 9/227 (3%)
Strand = Plus / Minus
Query: 821 ccatgggtgcttggcggtgatctcgcggagctccttcatgctctccggctcccgcgggta 880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ccatgggtgcttggcggtgatctcgcggagctccttcatgctctccggctcccgcgggta 258
Query: 881 cacgctcgtgtccaggatgtactggtagaggtcgtcgctcttgagcaggctcttgtggcc 940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 257 cacgctcgtgtccaggatgtactggtagaggtcgtcgctcttgagcaggctcttgtgtcc 198
Query: 941 gacctcggagtgccgcgtcttctgctcgc------cgttgccgttggcctgctgctcctg 994
|||||||||||| |||||||||||||||| |||||||||||||||||| | || |
Sbjct: 197 gacctcggagtggcgcgtcttctgctcgccgttggcgttgccgttggcctgctccgccgg 138
Query: 995 cgccggc---gccgcctcggtcgccgtggtggccattgcgtgcagtg 1038
||| | | |||||||||||||||||||||||||||||| ||||||
Sbjct: 137 cgcggccttggccgcctcggtcgccgtggtggccattgcgggcagtg 91
Score = 184 bits (93), Expect = 1e-044
Identities = 102/105 (97%)
Strand = Plus / Minus
Query: 440 gaggccgcccagcttcaccagcttcagcagccgctcgtggtagttgaggtagttgtcctt 499
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 548 gaggccccccagcttcaccagcttgagcagccggtcgtggtagttgaggtagttgtcctt 489
Query: 500 gtcggcgtccacgaagacgaagtcgaacgacccgtggttcttctc 544
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gtcggcgtccacgaagacgaagtcgaacgacccgtggttcttctc 444
Score = 58.0 bits (29), Expect = 2e-006
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 794 ctcgtcggcggaggtcgtcatcaggttcc 822
|||||||||||||||||||||||||||||
Sbjct: 446 ctcgtcggcggaggtcgtcatcaggttcc 418
>gb|CW265397.1|CW265397 104_734_11231853_148_35263_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11231853, DNA
sequence
Length = 355
Score = 291 bits (147), Expect = 7e-077
Identities = 192/207 (92%)
Strand = Plus / Plus
Query: 248 ttttcacttgacgcggcggcagagggtgacgccgtcgccgacggggagctggcagatctc 307
||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||
Sbjct: 149 ttttcacttgacgcggcggtagagggtgacgccgtagccgacggggagctggtagatctc 208
Query: 308 gacgcggtcgtcggcggcgagcgccttgttgaggacgagcacgaagtcgcggtagaagcg 367
|||||| ||||||||||||||||||||||||||||| ||||||| ||| |||||||||||
Sbjct: 209 gacgcgatcgtcggcggcgagcgccttgttgaggactagcacgatgtcacggtagaagcg 268
Query: 368 gatgtacttgcgcatgggcgcgtcgtcggggagcacgacggagccgttccacagcgtgtt 427
|||||||||||||||||| |||||||| ||||||||||| ||| ||||||||||| ||||
Sbjct: 269 gatgtacttgcgcatgggggcgtcgtctgggagcacgacagagacgttccacagcttgtt 328
Query: 428 gtcgtagccgatgaggccgcccagctt 454
||| |||| ||||||||| ||||||||
Sbjct: 329 gtcatagcagatgaggccccccagctt 355
Score = 50.1 bits (25), Expect = 4e-004
Identities = 68/79 (86%), Gaps = 5/79 (6%)
Strand = Plus / Plus
Query: 144 gccggtggataattaatgctgcgggtcgtct--attatgattggaat-gaggatgcggc- 199
||||||| ||||||||||||||| ||||||| | ||||||||| || | |||||||||
Sbjct: 57 gccggtgaataattaatgctgcgcgtcgtctacaatatgattgggatgggggatgcggcg 116
Query: 200 -cggcggcgccgtcggtgg 217
||||||||||||| ||||
Sbjct: 117 gcggcggcgccgtctgtgg 135
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 460,428
Number of Sequences: 832831
Number of extensions: 460428
Number of successful extensions: 149239
Number of sequences better than 0.5: 214
Number of HSP's better than 0.5 without gapping: 214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 148599
Number of HSP's gapped (non-prelim): 607
length of query: 1115
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1095
effective length of database: 474,703,049
effective search space: 519799838655
effective search space used: 519799838655
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)