BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2455820.2.1
(1312 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN135891.1|CN135891 OX1_39_C06.g1_A002 Oxidatively-stres... 1189 0.0
gb|CN127212.1|CN127212 RHOH1_21_E05.g3_A002 Acid- and alkal... 1176 0.0
gb|CN127681.1|CN127681 RHOH1_24_A08.g3_A002 Acid- and alkal... 1049 0.0
gb|CX609800.1|CX609800 ANR1_14_G03.g1_A002 Anaerobic roots ... 1019 0.0
gb|CF488868.1|CF488868 POL1_52_E10.g1_A002 Pollen Sorghum b... 985 0.0
gb|CX621998.1|CX621998 GABR1_61_A04.g2_A002 GA- or brassino... 940 0.0
gb|CX621918.1|CX621918 GABR1_61_A04.b2_A002 GA- or brassino... 934 0.0
gb|CX621999.1|CX621999 GABR1_61_A05.g2_A002 GA- or brassino... 920 0.0
gb|CN142381.1|CN142381 WOUND1_9_D10.g1_A002 Wounded leaves ... 914 0.0
gb|CN132323.1|CN132323 OX1_5_B02.g1_A002 Oxidatively-stress... 910 0.0
gb|CF434140.1|CF434140 NIT1_32_H01.g1_A002 Nitrogen-deficie... 902 0.0
gb|CD227449.1|CD227449 CCC1_51_D09.g1_A007 Callus culture/c... 900 0.0
gb|CD226294.1|CD226294 CCC1_44_B06.g1_A007 Callus culture/c... 890 0.0
gb|CD209053.1|CD209053 HS1_45_F05.g1_A012 Heat-shocked seed... 866 0.0
gb|CF486239.1|CF486239 POL1_36_C08.g1_A002 Pollen Sorghum b... 862 0.0
gb|CN142308.1|CN142308 WOUND1_9_D10.b1_A002 Wounded leaves ... 852 0.0
gb|CN150372.1|CN150372 WOUND1_68_E07.g1_A002 Wounded leaves... 833 0.0
gb|BI351339.1|BI351339 IP1_70_C11.b1_A002 Immature pannicle... 813 0.0
gb|BG488367.1|BG488367 RHIZ2_62_G10.b1_A003 Rhizome2 (RHIZ2... 807 0.0
gb|CF489240.1|CF489240 POL1_55_G01.g1_A002 Pollen Sorghum b... 801 0.0
gb|BG465494.1|BG465494 RHIZ2_45_C07.b1_A003 Rhizome2 (RHIZ2... 785 0.0
gb|CX621919.1|CX621919 GABR1_61_A05.b2_A002 GA- or brassino... 785 0.0
gb|CF426928.1|CF426928 PH1_2_G08.g1_A002 Phosphorous-defici... 783 0.0
gb|CD235440.1|CD235440 SS1_29_F07.g1_A012 Salt-stressed see... 781 0.0
gb|CF427487.1|CF427487 PH1_1_F06.g1_A002 Phosphorous-defici... 773 0.0
gb|CX614714.1|CX614714 GABR1_15_G08.g1_A002 GA- or brassino... 773 0.0
gb|BG488217.1|BG488217 RHIZ2_60_H11.b1_A003 Rhizome2 (RHIZ2... 761 0.0
gb|BG464244.1|BG464244 EM1_71_D07.b1_A002 Embryo 1 (EM1) So... 755 0.0
gb|BG465559.1|BG465559 RHIZ2_46_A07.b1_A003 Rhizome2 (RHIZ2... 751 0.0
gb|CB926289.1|CB926289 ABA1_7_G09.g1_A012 Abscisic acid-tre... 731 0.0
gb|CB928855.1|CB928855 ABA1_24_E06.g1_A012 Abscisic acid-tr... 720 0.0
gb|CF430669.1|CF430669 NIT1_3_B01.g1_A002 Nitrogen-deficien... 718 0.0
gb|BM323977.1|BM323977 PIC1_29_H04.b1_A002 Pathogen-infecte... 716 0.0
gb|BG560341.1|BG560341 RHIZ2_73_C03.b1_A003 Rhizome2 (RHIZ2... 702 0.0
gb|CN135808.1|CN135808 OX1_39_C06.b1_A002 Oxidatively-stres... 656 0.0
gb|CD227433.1|CD227433 CCC1_51_D09.b1_A007 Callus culture/c... 640 0.0
gb|CN127600.1|CN127600 RHOH1_24_A08.b1_A002 Acid- and alkal... 640 0.0
gb|CF486159.1|CF486159 POL1_36_C08.b1_A002 Pollen Sorghum b... 632 e-179
gb|BE594228.1|BE594228 WS1_103_H04.b1_A002 Water-stressed 1... 626 e-177
gb|BG159656.1|BG159656 OV2_7_D09.b1_A002 Ovary 2 (OV2) Sorg... 618 e-175
gb|CN127125.1|CN127125 RHOH1_21_E05.b1_A002 Acid- and alkal... 611 e-173
gb|CX609713.1|CX609713 ANR1_14_G03.b1_A002 Anaerobic roots ... 605 e-171
gb|BG739654.1|BG739654 EM1_73_E02.b1_A002 Embryo 1 (EM1) So... 587 e-165
gb|BG488174.1|BG488174 RHIZ2_60_D11.b1_A003 Rhizome2 (RHIZ2... 523 e-146
gb|BG560577.1|BG560577 RHIZ2_59_B06.b1_A003 Rhizome2 (RHIZ2... 519 e-145
gb|BE593911.1|BE593911 WS1_103_H04.g1_A002 Water-stressed 1... 507 e-142
gb|BM328492.1|BM328492 PIC1_29_H04.g1_A002 Pathogen-infecte... 502 e-140
gb|BG465157.1|BG465157 EM1_34_B03.b1_A002 Embryo 1 (EM1) So... 488 e-136
gb|BG559753.1|BG559753 RHIZ2_73_C03.g1_A003 Rhizome2 (RHIZ2... 476 e-132
gb|CB926381.1|CB926381 ABA1_8_D03.g1_A012 Abscisic acid-tre... 466 e-129
gb|CD235416.1|CD235416 SS1_29_F07.b1_A012 Salt-stressed see... 466 e-129
gb|BG464569.1|BG464569 EM1_71_D07.g1_A002 Embryo 1 (EM1) So... 462 e-128
gb|CD226192.1|CD226192 CCC1_44_B06.b1_A007 Callus culture/c... 450 e-124
gb|CN132247.1|CN132247 OX1_5_B02.b1_A002 Oxidatively-stress... 450 e-124
gb|CN150289.1|CN150289 WOUND1_68_E07.b1_A002 Wounded leaves... 428 e-118
gb|BG560584.1|BG560584 RHIZ2_59_C01.b1_A003 Rhizome2 (RHIZ2... 420 e-115
gb|BG487875.1|BG487875 RHIZ2_60_D11.g1_A003 Rhizome2 (RHIZ2... 414 e-114
gb|BG049176.1|BG049176 OV1_24_D10.g1_A002 Ovary 1 (OV1) Sor... 404 e-111
gb|BG488061.1|BG488061 RHIZ2_62_G10.g1_A003 Rhizome2 (RHIZ2... 391 e-106
gb|BG465846.1|BG465846 RHIZ2_45_C07.g1_A003 Rhizome2 (RHIZ2... 387 e-105
gb|BI351138.1|BI351138 IP1_70_C11.g1_A002 Immature pannicle... 385 e-105
gb|CW087176.1|CW087176 104_431_10947456_114_33027_088 Sorgh... 351 1e-094
gb|CW087177.1|CW087177 104_431_10947456_116_33023_088 Sorgh... 351 1e-094
gb|CW324686.1|CW324686 104_819_11477291_148_35910_042 Sorgh... 351 1e-094
gb|BG465902.1|BG465902 RHIZ2_46_A07.g1_A003 Rhizome2 (RHIZ2... 287 1e-075
gb|CX614641.1|CX614641 GABR1_15_G08.b1_A002 GA- or brassino... 280 3e-073
gb|BG241770.1|BG241770 RHIZ2_50_A02.b1_A003 Rhizome2 (RHIZ2... 234 2e-059
gb|BG558687.1|BG558687 RHIZ2_59_B06.g1_A003 Rhizome2 (RHIZ2... 218 1e-054
gb|CF431426.1|CF431426 NIT1_7_H02.b1_A002 Nitrogen-deficien... 202 6e-050
gb|CN133434.1|CN133434 OX1_12_E06.b1_A002 Oxidatively-stres... 202 6e-050
gb|CN133512.1|CN133512 OX1_12_E06.g1_A002 Oxidatively-stres... 202 6e-050
gb|BG558693.1|BG558693 RHIZ2_59_C01.g1_A003 Rhizome2 (RHIZ2... 198 9e-049
gb|CF426903.1|CF426903 PH1_2_G08.b1_A002 Phosphorous-defici... 194 1e-047
gb|CF430590.1|CF430590 NIT1_3_G02.b1_A002 Nitrogen-deficien... 194 1e-047
gb|CF430623.1|CF430623 NIT1_3_B01.b1_A002 Nitrogen-deficien... 194 1e-047
gb|CD233128.1|CD233128 SS1_12_H08.b1_A012 Salt-stressed see... 186 4e-045
gb|BG464783.1|BG464783 EM1_34_B03.g1_A002 Embryo 1 (EM1) So... 184 1e-044
gb|CF431459.1|CF431459 NIT1_7_H02.g1_A002 Nitrogen-deficien... 178 9e-043
gb|BG241789.1|BG241789 RHIZ2_50_C01.b1_A003 Rhizome2 (RHIZ2... 176 3e-042
gb|BG241509.1|BG241509 RHIZ2_50_C01.g1_A003 Rhizome2 (RHIZ2... 167 3e-039
gb|CF489194.1|CF489194 POL1_55_G01.b1_A002 Pollen Sorghum b... 165 1e-038
gb|BG241491.1|BG241491 RHIZ2_50_A02.g1_A003 Rhizome2 (RHIZ2... 161 2e-037
gb|CF488879.1|CF488879 POL1_52_F10.g1_A002 Pollen Sorghum b... 157 3e-036
gb|CL149718.1|CL149718 104_330_10778012_114_31353_332 Sorgh... 133 5e-029
gb|CL187771.1|CL187771 104_403_10901121_114_32461_037 Sorgh... 133 5e-029
gb|CL187772.1|CL187772 104_403_10901121_116_32465_037 Sorgh... 133 5e-029
gb|BG159402.1|BG159402 OV2_7_D09.g1_A002 Ovary 2 (OV2) Sorg... 133 5e-029
gb|CF430797.1|CF430797 NIT1_2_B11.g1_A002 Nitrogen-deficien... 44 0.032
gb|CN125494.1|CN125494 RHOH1_11_A04.g1_A002 Acid- and alkal... 44 0.032
gb|CN127678.1|CN127678 RHOH1_24_A05.g3_A002 Acid- and alkal... 44 0.032
gb|CN133835.1|CN133835 OX1_18_D02.g1_A002 Oxidatively-stres... 44 0.032
gb|CN134195.1|CN134195 OX1_20_G10.g1_A002 Oxidatively-stres... 44 0.032
>gb|CN135891.1|CN135891 OX1_39_C06.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_39_C06_A002 5', mRNA sequence
Length = 831
Score = 1189 bits (600), Expect = 0.0
Identities = 753/803 (93%), Gaps = 12/803 (1%)
Strand = Plus / Minus
Query: 403 tccatgtaaacaaatgttgaggcatagttccctgactttgtgtacagcacacggtgatgg 462
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 tccatataaacaaatgtcgaggcatagttccctgactttgtgtacagcacacggtgatgg 772
Query: 463 tagtcatggaagtccgagccgccatacagcggcaggaaatttgatgggctccatgggaag 522
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 771 tagtcatggaagtccgagccgccatacagtggcaggaaatttgatgggctccatgggaag 712
Query: 523 tgatagccgctgtgagcttcaactgtctccaaaaccctcaacaccatccacagccacagg 582
|||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 711 tgatagccgctgtgagcttcaactgtctccaatatcctcaacaccatccacagccacagg 652
Query: 583 gtgaagagatgagggccagtaagagcaggaccaacaactggggcgaatcccaggaacaaa 642
||||| ||||||||||||||||||||||||||||| | || |||||||||||||||||||
Sbjct: 651 gtgaacagatgagggccagtaagagcaggaccaaccattgtggcgaatcccaggaacaaa 592
Query: 643 atttcagctgggtgggcatattccgatgttaaaccaaagggtgtggcgtactcatggtgg 702
||||||||||||||||||||||| || |||||||||||||||||||| ||||| ||||||
Sbjct: 591 atttcagctgggtgggcatattcggaagttaaaccaaagggtgtggcatactcgtggtgg 532
Query: 703 acgctgtgaacgtgtttgtatagccatttcgtatgcaatgccctgtgcccccaatagaat 762
||||||||||| || |||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 531 acgctgtgaacatgcttgtatagccatttcgtatgcagtgccctgtgcccccagtagaat 472
Query: 763 ataaaatcctcaaggacaaagtagaaaagaacttgagatacaacaaccgaccaatgtggc 822
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 471 ataaaatcctcaaggacaaagtagaaaagaacttgagatacaacaaccgtccaatgtggt 412
Query: 823 aaaggaagagagctcctgagacccatgaatttgaaggcaggatacgagaaaatcatgaca 882
| ||||||||||||||| |||||||| ||| |||||||||| || |||||||||||||||
Sbjct: 411 agaggaagagagctcctaagacccataaatctgaaggcagggtatgagaaaatcatgaca 352
Query: 883 ggcaggttcacacatacatggtagagaatgaggcgcaagacacatctgttttggtaagca 942
|||||||||||||| |||||||| ||||| || |||||||||||||||||||||||||||
Sbjct: 351 ggcaggttcacacagacatggtacagaataagacgcaagacacatctgttttggtaagca 292
Query: 943 gaggtgttgctcttcttctggatcttgtacttggcgaagagtccgaagcgctcgaagagg 1002
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 ggggtgttgctcttcttctggatcttgtacttggcgaagagtccgaagcgctcgaagagg 232
Query: 1003 agggaggggaggccggagaggaagaagacggtctcgtggagcaggaaggtgacgacggtg 1062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 agggaggggaggccggagaggaagaagacggtctcgtggagcaggaaggtgacgacggtg 172
Query: 1063 gcgagctggaactcggtgaagttggcgatcaggagctgccacgctgagtcgatggctgac 1122
|||||||||||||||||||||||||||||||||| ||||||||| || |||||||| |||
Sbjct: 171 gcgagctggaactcggtgaagttggcgatcaggacctgccacgcggactcgatggcggac 112
Query: 1123 atgggcgccgccattgtgagagagatagatcgccggcggcgaagatgccgaggaggggag 1182
||||||||||||||| ||| |||||||||||||||||| ||||||||||||
Sbjct: 111 atgggcgccgccattatga----------tcgccggcggcgaagatg-cgaggaggggag 63
Query: 1183 aggg-gaggctgagcctggcctg 1204
||| ||| | ||||||||||||
Sbjct: 62 cgggtgagccagagcctggcctg 40
>gb|CN127212.1|CN127212 RHOH1_21_E05.g3_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_21_E05_A002 5', mRNA sequence
Length = 774
Score = 1176 bits (593), Expect = 0.0
Identities = 686/717 (95%)
Strand = Plus / Minus
Query: 421 gaggcatagttccctgactttgtgtacagcacacggtgatggtagtcatggaagtccgag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 gaggcatagttccctgactttgtgtacagcacacggtgatggtagtcatggaagtccgag 712
Query: 481 ccgccatacagcggcaggaaatttgatgggctccatgggaagtgatagccgctgtgagct 540
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 ccgccatacagtggcaggaaatttgatgggctccatgggaagtgatagccgctgtgagct 652
Query: 541 tcaactgtctccaaaaccctcaacaccatccacagccacagggtgaagagatgagggcca 600
|||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 651 tcaactgtctccaatatcctcaacaccatccacagccacagggtgaacagatgagggcca 592
Query: 601 gtaagagcaggaccaacaactggggcgaatcccaggaacaaaatttcagctgggtgggca 660
||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 591 gtaagagcaggaccaaccactgtggcgaatcccaggaacaaaatttcagctgggtgggca 532
Query: 661 tattccgatgttaaaccaaagggtgtggcgtactcatggtggacgctgtgaacgtgtttg 720
||||| || |||||||||||||||||||| ||||| ||||||||||||||||| || |||
Sbjct: 531 tattcggaagttaaaccaaagggtgtggcatactcgtggtggacgctgtgaacatgcttg 472
Query: 721 tatagccatttcgtatgcaatgccctgtgcccccaatagaatataaaatcctcaaggaca 780
||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 471 tatagccatttcgtatgcagtgccctgtgcccccagtagaatataaaatcctcaaggaca 412
Query: 781 aagtagaaaagaacttgagatacaacaaccgaccaatgtggcaaaggaagagagctcctg 840
||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||
Sbjct: 411 aagtagaaaagaacttgagatacaacaaccgtccaatgtggtagaggaagagagctccta 352
Query: 841 agacccatgaatttgaaggcaggatacgagaaaatcatgacaggcaggttcacacataca 900
|||||||| ||| |||||||||| || ||||||||||||||||||||||||||||| |||
Sbjct: 351 agacccataaatctgaaggcagggtatgagaaaatcatgacaggcaggttcacacagaca 292
Query: 901 tggtagagaatgaggcgcaagacacatctgttttggtaagcagaggtgttgctcttcttc 960
||||| ||||| || |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 291 tggtacagaataagacgcaagacacatctgttttggtaagcaggggtgttgctcttcttc 232
Query: 961 tggatcttgtacttggcgaagagtccgaagcgctcgaagaggagggaggggaggccggag 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 tggatcttgtacttggcgaagagtccgaagcgctcgaagaggagggaggggaggccggag 172
Query: 1021 aggaagaagacggtctcgtggagcaggaaggtgacgacggtggcgagctggaactcggtg 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 aggaagaagacggtctcgtggagcaggaaggtgacgacggtggcgagctggaactcggtg 112
Query: 1081 aagttggcgatcaggagctgccacgctgagtcgatggctgacatgggcgccgccatt 1137
|||||||||||||||| ||||||||| || |||||||| ||||||||||||||||||
Sbjct: 111 aagttggcgatcaggacctgccacgcggactcgatggcggacatgggcgccgccatt 55
Score = 50.1 bits (25), Expect = 5e-004
Identities = 32/33 (96%), Gaps = 1/33 (3%)
Strand = Plus / Minus
Query: 1150 gatcgccggcggcgaagatgccgaggaggggag 1182
|||||||||||||||||||| ||||||||||||
Sbjct: 52 gatcgccggcggcgaagatg-cgaggaggggag 21
>gb|CN127681.1|CN127681 RHOH1_24_A08.g3_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_24_A08_A002 5', mRNA sequence
Length = 744
Score = 1049 bits (529), Expect = 0.0
Identities = 676/724 (93%), Gaps = 12/724 (1%)
Strand = Plus / Minus
Query: 482 cgccatacagcggcaggaaatttgatgggctccatgggaagtgatagccgctgtgagctt 541
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 cgccatacagtggcaggaaatttgatgggctccatgggaagtgatagccgctgtgagctt 685
Query: 542 caactgtctccaaaaccctcaacaccatccacagccacagggtgaagagatgagggccag 601
||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 684 caactgtctccaatatcctcaacaccatccacagccacagggtgaacagatgagggccag 625
Query: 602 taagagcaggaccaacaactggggcgaatcccaggaacaaaatttcagctgggtgggcat 661
|||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 624 taagagcaggaccaaccactgtggcgaatcccaggaacaaaatttcagctgggtgggcat 565
Query: 662 attccgatgttaaaccaaagggtgtggcgtactcatggtggacgctgtgaacgtgtttgt 721
|||| || |||||||||||||||||||| ||||| ||||||||||||||||| || ||||
Sbjct: 564 attcggaagttaaaccaaagggtgtggcatactcgtggtggacgctgtgaacatgcttgt 505
Query: 722 atagccatttcgtatgcaatgccctgtgcccccaatagaatataaaatcctcaaggacaa 781
|||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct: 504 atagccatttcgtatgcagtgccctgtgcccccagtagaatataaaatcctcaaggacaa 445
Query: 782 agtagaaaagaacttgagatacaacaaccgaccaatgtggcaaaggaagagagctcctga 841
|||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||| |
Sbjct: 444 agtagaaaagaacttgagatacaacaaccgtccaatgtggtagaggaagagagctcctaa 385
Query: 842 gacccatgaatttgaaggcaggatacgagaaaatcatgacaggcaggttcacacatacat 901
||||||| ||| |||||||||| || ||||||||||||||||||||||||||||| ||||
Sbjct: 384 gacccataaatctgaaggcagggtatgagaaaatcatgacaggcaggttcacacagacat 325
Query: 902 ggtagagaatgaggcgcaagacacatctgttttggtaagcagaggtgttgctcttcttct 961
|||| ||||| || |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 324 ggtacagaataagacgcaagacacatctgttttggtaagcaggggtgttgctcttcttct 265
Query: 962 ggatcttgtacttggcgaagagtccgaagcgctcgaagaggagggaggggaggccggaga 1021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggatcttgtacttggcgaagagtccgaagcgctcgaagaggagggaggggaggccggaga 205
Query: 1022 ggaagaagacggtctcgtggagcaggaaggtgacgacggtggcgagctggaactcggtga 1081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaagaagacggtctcgtggagcaggaaggtgacgacggtggcgagctggaactcggtga 145
Query: 1082 agttggcgatcaggagctgccacgctgagtcgatggctgacatgggcgccgccattgtga 1141
|||||||||||||| ||||||||| || |||||||| |||||||||||||||||| |||
Sbjct: 144 agttggcgatcagggcctgccacgcggactcgatggcggacatgggcgccgccattatga 85
Query: 1142 gagagatagatcgccggcggcgaagatgccgaggaggggagaggg-gaggctgagcctgg 1200
|||||||||||||||||| |||||||||||| ||| ||| | ||||||||
Sbjct: 84 ----------tcgccggcggcgaagatg-cgaggaggggagcgggtgagccagagcctgg 36
Query: 1201 cctg 1204
||||
Sbjct: 35 cctg 32
>gb|CX609800.1|CX609800 ANR1_14_G03.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_14_G03_A002 5', mRNA sequence
Length = 744
Score = 1019 bits (514), Expect = 0.0
Identities = 664/713 (93%), Gaps = 12/713 (1%)
Strand = Plus / Minus
Query: 493 ggcaggaaatttgatgggctccatgggaagtgatagccgctgtgagcttcaactgtctcc 552
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 741 ggcaggaaatttgatggtctccatgggaagtgatagccgctctgagcttcaactgtctcc 682
Query: 553 aaaaccctcaacaccatccacagccacagggtgaagagatgagggccagtaagagcagga 612
|| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 681 aatatcctcaacaccatccacagccacagggtgaacagatgagggccagtaagagcagga 622
Query: 613 ccaacaactggggcgaatcccaggaacaaaatttcagctgggtgggcatattccgatgtt 672
||||| |||| |||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 621 ccaaccactgtggcgaatcccaggaacaaaatttcagctgggtgggcatattcggaagtt 562
Query: 673 aaaccaaagggtgtggcgtactcatggtggacgctgtgaacgtgtttgtatagccatttc 732
||||||||||||||||| ||||| ||||||||||||||||| || |||||||||||||||
Sbjct: 561 aaaccaaagggtgtggcatactcgtggtggacgctgtgaacatgcttgtatagccatttc 502
Query: 733 gtatgcaatgccctgtgcccccaatagaatataaaatcctcaaggacaaagtagaaaaga 792
||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtatgcagtgccctgtgccccccgtagaatataaaatcctcaaggacaaagtagaaaaga 442
Query: 793 acttgagatacaacaaccgaccaatgtggcaaaggaagagagctcctgagacccatgaat 852
||||||||||||||||||| ||||||||| | ||||||||||||||| |||||||| |||
Sbjct: 441 acttgagatacaacaaccgtccaatgtggtagaggaagagagctcctaagacccataaat 382
Query: 853 ttgaaggcaggatacgagaaaatcatgacaggcaggttcacacatacatggtagagaatg 912
|||||||||| || ||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 381 ctgaaggcagggtatgagaaaatcatgacaggcaggttcacacagacatggtacagaata 322
Query: 913 aggcgcaagacacatctgttttggtaagcagaggtgttgctcttcttctggatcttgtac 972
|| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 agacgcaagacacatctgttttggtaagcaggggtgttgctcttcttctggatcttgtac 262
Query: 973 ttggcgaagagtccgaagcgctcgaagaggagggaggggaggccggagaggaagaagacg 1032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttggcgaagagtccgaagcgctcgaagaggagggaggggaggccggagaggaagaagacg 202
Query: 1033 gtctcgtggagcaggaaggtgacgacggtggcgagctggaactcggtgaagttggcgatc 1092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtctcgtggagcaggaaggtgacgacggtggcgagctggaactcggtgaagttggcgatc 142
Query: 1093 aggagctgccacgctgagtcgatggctgacatgggcgccgccattgtgagagagatagat 1152
|||| ||||||||| || |||||||| |||||||||||||||||| ||| |
Sbjct: 141 aggacctgccacgcggactcgatggcggacatgggcgccgccattatga----------t 92
Query: 1153 cgccggcggcgaagatgccgaggaggggagaggg-gaggctgagcctggcctg 1204
||||||||||||||||| |||||||||||| ||| ||| | ||||||||||||
Sbjct: 91 cgccggcggcgaagatg-cgaggaggggagcgggtgagccagagcctggcctg 40
>gb|CF488868.1|CF488868 POL1_52_E10.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_52_E10_A002 5', mRNA sequence
Length = 680
Score = 985 bits (497), Expect = 0.0
Identities = 616/653 (94%), Gaps = 2/653 (0%)
Strand = Plus / Minus
Query: 485 catacagcggcaggaaatttgatgggctccatgggaagtgatagccgctgtgagcttcaa 544
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 catacagtggcaggaaatttgatgggctccatgggaagtgatagccgctgtgagcttcaa 621
Query: 545 ctgtctccaaaaccct-caacaccatccacagccacagggtgaagagatgagggccagta 603
|||||||||| | ||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 620 ctgtctccaatatccttcaacaccatccacagccacagggtgaacagatgagggccagta 561
Query: 604 agagcaggaccaacaactggggcgaatcccaggaacaaaatttcagctgggtgggcatat 663
|||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 agagcaggaccaaccactgtggcgaatcccaggaacaaaatttcagctgggtgggcatat 501
Query: 664 tccgatgttaaaccaaagggtgtggcgtactcatggtggacgctgtgaacgtgtttgtat 723
|| || |||||||||||||||||||| ||||| ||||||||||||||||| || ||||||
Sbjct: 500 tcggaagttaaaccaaagggtgtggcatactcgtggtggacgctgtgaacatgcttgtat 441
Query: 724 agccatttcgtatgcaatgccctgtgcccccaatagaatataaaatcctcaaggacaaag 783
|||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 440 agccatttcgtatgcagtgccctgtgcccccagtagaatataaaatcctcaaggacaaag 381
Query: 784 tagaaaagaacttgagatacaacaaccgaccaatgtggcaaaggaagagagctcctgaga 843
|||||||||||||||||||||||||||| ||||||||| | ||||||||||||||| |||
Sbjct: 380 tagaaaagaacttgagatacaacaaccgtccaatgtggtagaggaagagagctcctaaga 321
Query: 844 cccatgaatttgaaggcaggatacgagaaaatcatgacaggcaggttcacacatacatgg 903
||||| ||| |||||||||| || ||||||||||||||||||||||||||||| ||||||
Sbjct: 320 cccataaatctgaaggcagggtatgagaaaatcatgacaggcaggttcacacagacatgg 261
Query: 904 tagagaatgaggcgcaagacacatctgttttggtaagcagaggtgttgctcttcttctgg 963
|| ||||| || ||||||||||||||||| |||||||||| |||| | |||||||||||
Sbjct: 260 tacagaataagacgcaagacacatctgttctggtaagcaggggtgaagatcttcttctgg 201
Query: 964 atcttgtacttggcgaagagtccgaagcgctcgaagaggagggaggggaggccggagagg 1023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 atcttgtacttggcgaagagtccgaagcgctcgaagaggagggaggggaggccggagagg 141
Query: 1024 aagaagacggtctcgtggagcaggaaggtgacgacggtggcgagctggaactcggtgaag 1083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 aagaagacggtctcgtggagcaggaaggtgacgacggtggcgagctggaactcggtgaag 81
Query: 1084 ttggcgatcaggagctgccacgctgagtcgatggctga-catgggcgccgcca 1135
||||||||||||| ||||||||| || |||||||| || ||||||||||||||
Sbjct: 80 ttggcgatcaggacctgccacgcggactcgatggcggancatgggcgccgcca 28
>gb|CX621998.1|CX621998 GABR1_61_A04.g2_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_61_A04_A002 5', mRNA sequence
Length = 680
Score = 940 bits (474), Expect = 0.0
Identities = 618/665 (92%), Gaps = 12/665 (1%)
Strand = Plus / Minus
Query: 541 tcaactgtctccaaaaccctcaacaccatccacagccacagggtgaagagatgagggcca 600
|||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 680 tcaactgtctccaatatcctcaacaccatccacagccacagggtgaacagatgagggcca 621
Query: 601 gtaagagcaggaccaacaactggggcgaatcccaggaacaaaatttcagctgggtgggca 660
||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 620 gtaagagcaggaccaaccactgtggcgaatcccaggaacaaaatttcagctgggtgggca 561
Query: 661 tattccgatgttaaaccaaagggtgtggcgtactcatggtggacgctgtgaacgtgtttg 720
||||| || |||||||||||||||||||| ||||| ||||||||||||||||| || |||
Sbjct: 560 tattcggaagttaaaccaaagggtgtggcatactcgtggtggacgctgtgaacatgcttg 501
Query: 721 tatagccatttcgtatgcaatgccctgtgcccccaatagaatataaaatcctcaaggaca 780
||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 500 tatagccatttcgtatgcagtgccctgtgcccccagtagaatataaaatcctcaaggaca 441
Query: 781 aagtagaaaagaacttgagatacaacaaccgaccaatgtggcaaaggaagagagctcctg 840
||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||
Sbjct: 440 aagtagaaaagaacttgagatacaacaaccgtccaatgtggtagaggaagagagctccta 381
Query: 841 agacccatgaatttgaaggcaggatacgagaaaatcatgacaggcaggttcacacataca 900
|||||||| ||| |||||||||| || ||||||||||||||||||||||||||||| |||
Sbjct: 380 agacccataaatctgaaggcagggtatgagaaaatcatgacaggcaggttcacacagaca 321
Query: 901 tggtagagaatgaggcgcaagacacatctgttttggtaagcagaggtgttgctcttcttc 960
||||| ||||| || |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 320 tggtacagaataagacgcaagacacatctgttttggtaagcaggggtgttgctcttcttc 261
Query: 961 tggatcttgtacttggcgaagagtccgaagcgctcgaagaggagggaggggaggccggag 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tggatcttgtacttggcgaagagtccgaagcgctcgaagaggagggaggggaggccggag 201
Query: 1021 aggaagaagacggtctcgtggagcaggaaggtgacgacggtggcgagctggaactcggtg 1080
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tggaagaagacggtctcgtggagcaggaaggtgacgacggtggcgagctggaactcggtg 141
Query: 1081 aagttggcgatcaggagctgccacgctgagtcgatggctgacatgggcgccgccattgtg 1140
|||||||||||||||| ||||||||| || |||||||| |||||||||||||||||| ||
Sbjct: 140 aagttggcgatcaggacctgccacgcggactcgatggcggacatgggcgccgccattatg 81
Query: 1141 agagagatagatcgccggcggcgaagatgccgaggaggggagaggg-gaggctgagcctg 1199
| |||||||||||||||||| |||||||||||| ||| ||| | |||||||
Sbjct: 80 a----------tcgccggcggcgaagatg-cgaggaggggagcgggtgagccagagcctg 32
Query: 1200 gcctg 1204
|||||
Sbjct: 31 gcctg 27
>gb|CX621918.1|CX621918 GABR1_61_A04.b2_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_61_A04_A002 3', mRNA sequence
Length = 779
Score = 934 bits (471), Expect = 0.0
Identities = 552/579 (95%)
Strand = Plus / Minus
Query: 312 ctgagcagcttccacaatctacagatttttcccttctttctcctcaatggtctttgcctt 371
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 579 ctgagcagcttccacaatctacagattcttcccttctttctcctcaatggtctttgcctt 520
Query: 372 gcgataatccttgtccgtgccgaacaaccagtccatgtaaacaaatgttgaggcatagtt 431
|||||||||||||||||| || |||||||||||||| ||||||||||| |||||||||||
Sbjct: 519 gcgataatccttgtccgtcccaaacaaccagtccatataaacaaatgtcgaggcatagtt 460
Query: 432 ccctgactttgtgtacagcacacggtgatggtagtcatggaagtccgagccgccatacag 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 ccctgactttgtgtacagcacacggtgatggtagtcatggaagtccgagccgccatacag 400
Query: 492 cggcaggaaatttgatgggctccatgggaagtgatagccgctgtgagcttcaactgtctc 551
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 tggcaggaaatttgatgggctccatgggaagtgatagccgctgtgagcttcaactgtctc 340
Query: 552 caaaaccctcaacaccatccacagccacagggtgaagagatgagggccagtaagagcagg 611
||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 339 caatatcctcaacaccatccacagccacagggtgaacagatgagggccagtaagagcagg 280
Query: 612 accaacaactggggcgaatcccaggaacaaaatttcagctgggtgggcatattccgatgt 671
|||||| |||| |||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 279 accaaccactgtggcgaatcccaggaacaaaatttcagctgggtgggcatattcggaagt 220
Query: 672 taaaccaaagggtgtggcgtactcatggtggacgctgtgaacgtgtttgtatagccattt 731
|||||||||||||||||| ||||| ||||||||||||||||| || ||||||||||||||
Sbjct: 219 taaaccaaagggtgtggcatactcgtggtggacgctgtgaacatgcttgtatagccattt 160
Query: 732 cgtatgcaatgccctgtgcccccaatagaatataaaatcctcaaggacaaagtagaaaag 791
|||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 159 cgtatgcagtgccctgtgcccccagtagaatataaaatcctcaaggacaaagtagaaaag 100
Query: 792 aacttgagatacaacaaccgaccaatgtggcaaaggaagagagctcctgagacccatgaa 851
|||||||||||||||||||| ||||||||| | ||||||||||||||| |||||||| ||
Sbjct: 99 aacttgagatacaacaaccgtccaatgtggtagaggaagagagctcctaagacccataaa 40
Query: 852 tttgaaggcaggatacgagaaaatcatgacaggcaggtt 890
| |||||||||| || |||||||||||||||||||||||
Sbjct: 39 tctgaaggcagggtatgagaaaatcatgacaggcaggtt 1
Score = 172 bits (87), Expect = 5e-041
Identities = 155/177 (87%), Gaps = 3/177 (1%)
Strand = Plus / Minus
Query: 142 atcaaattcagttcatgacagaccagggccaccagggcctcattcttgatcatagcaaac 201
|||| |||||||||||||||||||| || | ||||| |||||||||||||||||||||||
Sbjct: 764 atcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatcatagcaaac 705
Query: 202 acaggaaatcaatatctcaacctatagtatcgatggtcaggagataa---actgactgtt 258
|||||||||||| ||||||||||||||||| ||| |||||| |||| ||||| ||||
Sbjct: 704 acaggaaatcaaaatctcaacctatagtatggatcgtcaggcaataactgactgagtgtt 645
Query: 259 tctagggtgcatccatatctccttccatgagtgaaactctatcgccagtcttgctga 315
|||||||||| ||||| ||| ||||||||| |||||||| ||||||||||||||
Sbjct: 644 tctagggtgcgtccatctctttttccatgagctcaactctattgccagtcttgctga 588
>gb|CX621999.1|CX621999 GABR1_61_A05.g2_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_61_A05_A002 5', mRNA sequence
Length = 691
Score = 920 bits (464), Expect = 0.0
Identities = 614/663 (92%), Gaps = 12/663 (1%)
Strand = Plus / Minus
Query: 543 aactgtctccaaaaccctcaacaccatccacagccacagggtgaagagatgagggccagt 602
|||||| ||||| | |||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 691 aactgtttccaatatcctcaacaccatccacagccacagggggaacagatgagggccagt 632
Query: 603 aagagcaggaccaacaactggggcgaatcccaggaacaaaatttcagctgggtgggcata 662
||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 631 aagagcaggaccaaccactgtggcgaatcccaggaacaaaatttcagctgggtgggcata 572
Query: 663 ttccgatgttaaaccaaagggtgtggcgtactcatggtggacgctgtgaacgtgtttgta 722
||| || |||||||||||||||||||| ||||| ||||||||||||||||| || |||||
Sbjct: 571 ttcggaagttaaaccaaagggtgtggcatactcgtggtggacgctgtgaacatgcttgta 512
Query: 723 tagccatttcgtatgcaatgccctgtgcccccaatagaatataaaatcctcaaggacaaa 782
||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 511 tagccatttcgtatgcagtgccctgtgcccccagtagaatataaaatcctcaaggacaaa 452
Query: 783 gtagaaaagaacttgagatacaacaaccgaccaatgtggcaaaggaagagagctcctgag 842
||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||| ||
Sbjct: 451 gtagaaaagaacttgagatacaacaaccgtccaatgtggtagaggaagagagctcctaag 392
Query: 843 acccatgaatttgaaggcaggatacgagaaaatcatgacaggcaggttcacacatacatg 902
|||||| ||| |||||||||| || ||||||||||||||||||||||||||||| |||||
Sbjct: 391 acccataaatctgaaggcagggtatgagaaaatcatgacaggcaggttcacacagacatg 332
Query: 903 gtagagaatgaggcgcaagacacatctgttttggtaagcagaggtgttgctcttcttctg 962
||| ||||| || |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 331 gtacagaataagacgcaagacacatctgttttggtaagcaggggtgttgctcttcttctg 272
Query: 963 gatcttgtacttggcgaagagtccgaagcgctcgaagaggagggaggggaggccggagag 1022
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 271 gatcttgtacttggcgaagagtccgaagcgctcgaagaggagggaggggaggccggagtg 212
Query: 1023 gaagaagacggtctcgtggagcaggaaggtgacgacggtggcgagctggaactcggtgaa 1082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 gaagaagacggtctcgtggagcaggaaggtgacgacggtggcgagctggaactcggtgaa 152
Query: 1083 gttggcgatcaggagctgccacgctgagtcgatggctgacatgggcgccgccattgtgag 1142
|||||||||||||| ||||||||| || |||||||| |||||||||||||||||| |||
Sbjct: 151 gttggcgatcaggacctgccacgcggactcgatggcggacatgggcgccgccattatga- 93
Query: 1143 agagatagatcgccggcggcgaagatgccgaggaggggagaggg-gaggctgagcctggc 1201
|||||||||||||||||| |||||||||||| ||| ||| | |||||||||
Sbjct: 92 ---------tcgccggcggcgaagatg-cgaggaggggagcgggtgagccagagcctggc 43
Query: 1202 ctg 1204
|||
Sbjct: 42 ctg 40
>gb|CN142381.1|CN142381 WOUND1_9_D10.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_9_D10_A002 5', mRNA sequence
Length = 731
Score = 914 bits (461), Expect = 0.0
Identities = 548/577 (94%)
Strand = Plus / Minus
Query: 403 tccatgtaaacaaatgttgaggcatagttccctgactttgtgtacagcacacggtgatgg 462
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 tccatataaacaaatgtcgaggcatagttccctgactttgtgtacagcacacggtgatgg 672
Query: 463 tagtcatggaagtccgagccgccatacagcggcaggaaatttgatgggctccatgggaag 522
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 671 tagtcatggaagtccgagccgccatacagtggcaggaaatttgatgggctccatgggaag 612
Query: 523 tgatagccgctgtgagcttcaactgtctccaaaaccctcaacaccatccacagccacagg 582
|||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 611 tgatagccgctgtgagcttcaactgtctccaatatcctcaacaccatccacagccacagg 552
Query: 583 gtgaagagatgagggccagtaagagcaggaccaacaactggggcgaatcccaggaacaaa 642
||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 551 gtgaacagatgagggccagtaagagcaggaccaaccactgtggcgaatcccaggaacaaa 492
Query: 643 atttcagctgggtgggcatattccgatgttaaaccaaagggtgtggcgtactcatggtgg 702
||||||||||||||||||||||| || |||||||||||||||||||| ||||| ||||||
Sbjct: 491 atttcagctgggtgggcatattcggaagttaaaccaaagggtgtggcatactcgtggtgg 432
Query: 703 acgctgtgaacgtgtttgtatagccatttcgtatgcaatgccctgtgcccccaatagaat 762
||||||||||| || |||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 431 acgctgtgaacatgcttgtatagccatttcgtatgcagtgccctgtgcccccagtagaat 372
Query: 763 ataaaatcctcaaggacaaagtagaaaagaacttgagatacaacaaccgaccaatgtggc 822
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 371 ataaaatcctcaaggacaaagtagaaaagaacttgagatacaacaaccgtccaatgtggt 312
Query: 823 aaaggaagagagctcctgagacccatgaatttgaaggcaggatacgagaaaatcatgaca 882
| ||||||||||||||| |||||||| ||| |||||||||| || |||||||||||||||
Sbjct: 311 agaggaagagagctcctaagacccataaatctgaaggcagggtatgagaaaatcatgaca 252
Query: 883 ggcaggttcacacatacatggtagagaatgaggcgcaagacacatctgttttggtaagca 942
|||||||||||||| |||||||| ||||| || |||||||||||||||||||||||||||
Sbjct: 251 ggcaggttcacacagacatggtacagaataagacgcaagacacatctgttttggtaagca 192
Query: 943 gaggtgttgctcttcttctggatcttgtacttggcga 979
| |||||||||||||||||||||||||||||||||||
Sbjct: 191 ggggtgttgctcttcttctggatcttgtacttggcga 155
Score = 77.8 bits (39), Expect = 2e-012
Identities = 102/122 (83%), Gaps = 12/122 (9%)
Strand = Plus / Minus
Query: 1084 ttggcgatcaggagctgccacgctgagtcgatggctgacatgggcgccgccattgtgaga 1143
||||||||||||| ||||||||| || |||||||| |||||||||||||||||| |||
Sbjct: 161 ttggcgatcaggacctgccacgcggactcgatggcggacatgggcgccgccattatga-- 104
Query: 1144 gagatagatcgccggcggcgaagatgccgaggaggggagaggg-gaggctgagcctggcc 1202
|||||||||||||||||| |||||||||||| ||| ||| | ||||||||||
Sbjct: 103 --------tcgccggcggcgaagatg-cgaggaggggagcgggtgagccagagcctggcc 53
Query: 1203 tg 1204
||
Sbjct: 52 tg 51
>gb|CN132323.1|CN132323 OX1_5_B02.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_5_B02_A002 5', mRNA sequence
Length = 677
Score = 910 bits (459), Expect = 0.0
Identities = 594/638 (93%), Gaps = 12/638 (1%)
Strand = Plus / Minus
Query: 568 atccacagccacagggtgaagagatgagggccagtaagagcaggaccaacaactggggcg 627
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||
Sbjct: 677 atccacagccacagggtgaacagatgagggccagtaagagcaggaccaaccactgtggcg 618
Query: 628 aatcccaggaacaaaatttcagctgggtgggcatattccgatgttaaaccaaagggtgtg 687
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 617 aatcccaggaacaaaatttcagctgggtgggcatattcggaagttaaaccaaagggtgtg 558
Query: 688 gcgtactcatggtggacgctgtgaacgtgtttgtatagccatttcgtatgcaatgccctg 747
|| ||||| ||||||||||||||||| || |||||||||||||||||||||| |||||||
Sbjct: 557 gcatactcgtggtggacgctgtgaacatgcttgtatagccatttcgtatgcagtgccctg 498
Query: 748 tgcccccaatagaatataaaatcctcaaggacaaagtagaaaagaacttgagatacaaca 807
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tgcccccagtagaatataaaatcctcaaggacaaagtagaaaagaacttgagatacaaca 438
Query: 808 accgaccaatgtggcaaaggaagagagctcctgagacccatgaatttgaaggcaggatac 867
|||| ||||||||| | ||||||||||||||| |||||||| ||| |||||||||| ||
Sbjct: 437 accgtccaatgtggtagaggaagagagctcctaagacccataaatctgaaggcagggtat 378
Query: 868 gagaaaatcatgacaggcaggttcacacatacatggtagagaatgaggcgcaagacacat 927
||||||||||||||||||||||||||||| |||||||| ||||| || ||||||||||||
Sbjct: 377 gagaaaatcatgacaggcaggttcacacagacatggtacagaataagacgcaagacacat 318
Query: 928 ctgttttggtaagcagaggtgttgctcttcttctggatcttgtacttggcgaagagtccg 987
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ctgttttggtaagcaggggtgttgctcttcttctggatcttgtacttggcgaagagtccg 258
Query: 988 aagcgctcgaagaggagggaggggaggccggagaggaagaagacggtctcgtggagcagg 1047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 aagcgctcgaagaggagggaggggaggccggagaggaagaagacggtctcgtggagcagg 198
Query: 1048 aaggtgacgacggtggcgagctggaactcggtgaagttggcgatcaggagctgccacgct 1107
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 197 aaggtgacgacggtggcgagctggaactcggtgaagttggcgatcaggacctgccacgcg 138
Query: 1108 gagtcgatggctgacatgggcgccgccattgtgagagagatagatcgccggcggcgaaga 1167
|| |||||||| |||||||||||||||||| ||| ||||||||||||||||
Sbjct: 137 gactcgatggcggacatgggcgccgccattatga----------tcgccggcggcgaaga 88
Query: 1168 tgccgaggaggggagaggg-gaggctgagcctggcctg 1204
|| |||||||||||| ||| ||| | ||||||||||||
Sbjct: 87 tg-cgaggaggggagcgggtgagccagagcctggcctg 51
>gb|CF434140.1|CF434140 NIT1_32_H01.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor cDNA
clone NIT1_32_H01_A002 5', mRNA sequence
Length = 693
Score = 902 bits (455), Expect = 0.0
Identities = 599/646 (92%), Gaps = 12/646 (1%)
Strand = Plus / Minus
Query: 560 tcaacaccatccacagccacagggtgaagagatgagggccagtaagagcaggaccaacaa 619
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 693 tcaacaccatccacagccacagggtgaacagatgagggccagtaagagcaggaccaacca 634
Query: 620 ctggggcgaatcccaggaacaaaatttcagctgggtgggcatattccgatgttaaaccaa 679
||| |||||||||||||||||||||||| ||||||||||||||||| || ||||||||||
Sbjct: 633 ctgtggcgaatcccaggaacaaaatttcggctgggtgggcatattcggaagttaaaccaa 574
Query: 680 agggtgtggcgtactcatggtggacgctgtgaacgtgtttgtatagccatttcgtatgca 739
|||||||||| ||||| ||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 573 agggtgtggcatactcgtggtggacgctgtgaacatgcttgtatagccatttcgtatgca 514
Query: 740 atgccctgtgcccccaatagaatataaaatcctcaaggacaaagtagaaaagaacttgag 799
||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 513 gtgccctgtgcccccagtagaatataaaatcctcaaggacaaagtagaaaggaacttgag 454
Query: 800 atacaacaaccgaccaatgtggcaaaggaagagagctcctgagacccatgaatttgaagg 859
|||||||||||| ||||||||| | ||||||||||||||| |||||||| ||| ||||||
Sbjct: 453 atacaacaaccgtccaatgtggtagaggaagagagctcctaagacccataaatctgaagg 394
Query: 860 caggatacgagaaaatcatgacaggcaggttcacacatacatggtagagaatgaggcgca 919
|||| || ||||||||||||||||||||||||||||| |||||||| ||||| || ||||
Sbjct: 393 cagggtatgagaaaatcatgacaggcaggttcacacagacatggtacagaataagacgca 334
Query: 920 agacacatctgttttggtaagcagaggtgttgctcttcttctggatcttgtacttggcga 979
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 333 agacacatctgttttggtaagcaggggtgttgctcttcttctggatcttgtacttggcga 274
Query: 980 agagtccgaagcgctcgaagaggagggaggggaggccggagaggaagaagacggtctcgt 1039
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 agagtccgaagcgctcgaagaggagggaggggaggccggagaggaagaagacggtctcgt 214
Query: 1040 ggagcaggaaggtgacgacggtggcgagctggaactcggtgaagttggcgatcaggagct 1099
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 213 ggagcaggaaggtgacgacggtggcgagctggaactcggtgaagttggtgatcaggacct 154
Query: 1100 gccacgctgagtcgatggctgacatgggcgccgccattgtgagagagatagatcgccggc 1159
||||||| || |||||||| |||||||||||||||||| ||| ||||||||
Sbjct: 153 gccacgcggactcgatggcggacatgggcgccgccattatga----------tcgccggc 104
Query: 1160 ggcgaagatgccgaggaggggagaggg-gaggctgagcctggcctg 1204
|||||||||| |||||||||||| ||| ||| | ||||||||||||
Sbjct: 103 ggcgaagatg-cgaggaggggagcgggtgagccagagcctggcctg 59
>gb|CD227449.1|CD227449 CCC1_51_D09.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_51_D09_A007 5', mRNA sequence
Length = 672
Score = 900 bits (454), Expect = 0.0
Identities = 589/633 (93%), Gaps = 12/633 (1%)
Strand = Plus / Minus
Query: 573 cagccacagggtgaagagatgagggccagtaagagcaggaccaacaactggggcgaatcc 632
||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 671 cagccacagggtgaacagatgagggccagtaagagcaggaccaaccactgtggcgaatcc 612
Query: 633 caggaacaaaatttcagctgggtgggcatattccgatgttaaaccaaagggtgtggcgta 692
||||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||
Sbjct: 611 caggaacaaaatttcagctgggtgggcatattcggaagttaaaccaaagggtgtggcata 552
Query: 693 ctcatggtggacgctgtgaacgtgtttgtatagccatttcgtatgcaatgccctgtgccc 752
||| ||||||||||||||||| || |||||||||||||||||||||| ||||||||||||
Sbjct: 551 ctcgtggtggacgctgtgaacatgcttgtatagccatttcgtatgcagtgccctgtgccc 492
Query: 753 ccaatagaatataaaatcctcaaggacaaagtagaaaagaacttgagatacaacaaccga 812
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ccagtagaatataaaatcctcaaggacaaagtagaaaagaacttgagatacaacaaccgt 432
Query: 813 ccaatgtggcaaaggaagagagctcctgagacccatgaatttgaaggcaggatacgagaa 872
||||||||| | ||||||||||||||| |||||||| ||| |||||||||| || |||||
Sbjct: 431 ccaatgtggtagaggaagagagctcctaagacccataaatctgaaggcagggtatgagaa 372
Query: 873 aatcatgacaggcaggttcacacatacatggtagagaatgaggcgcaagacacatctgtt 932
|||||||||||||||||||||||| |||||||| ||||| || |||||||||||||||||
Sbjct: 371 aatcatgacaggcaggttcacacagacatggtacagaataagacgcaagacacatctgtt 312
Query: 933 ttggtaagcagaggtgttgctcttcttctggatcttgtacttggcgaagagtccgaagcg 992
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ttggtaagcaggggtgttgctcttcttctggatcttgtacttggcgaagagtccgaagcg 252
Query: 993 ctcgaagaggagggaggggaggccggagaggaagaagacggtctcgtggagcaggaaggt 1052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ctcgaagaggagggaggggaggccggagaggaagaagacggtctcgtggagcaggaaggt 192
Query: 1053 gacgacggtggcgagctggaactcggtgaagttggcgatcaggagctgccacgctgagtc 1112
|||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||
Sbjct: 191 gacgacggtggcgagctggaactcggtgaagttggcgatcaggacctgccacgcggactc 132
Query: 1113 gatggctgacatgggcgccgccattgtgagagagatagatcgccggcggcgaagatgccg 1172
|||||| |||||||||||||||||| ||| |||||||||||||||||| ||
Sbjct: 131 gatggcggacatgggcgccgccattatga----------tcgccggcggcgaagatg-cg 83
Query: 1173 aggaggggagaggg-gaggctgagcctggcctg 1204
|||||||||| ||| ||| | ||||||||||||
Sbjct: 82 aggaggggagcgggtgagccagagcctggcctg 50
>gb|CD226294.1|CD226294 CCC1_44_B06.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_44_B06_A007 5', mRNA sequence
Length = 667
Score = 890 bits (449), Expect = 0.0
Identities = 587/632 (92%), Gaps = 12/632 (1%)
Strand = Plus / Minus
Query: 574 agccacagggtgaagagatgagggccagtaagagcaggaccaacaactggggcgaatccc 633
|||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 667 agccacagggtgaacagatgagggccagtaagagcaggaccaaccactgtggcgaatccc 608
Query: 634 aggaacaaaatttcagctgggtgggcatattccgatgttaaaccaaagggtgtggcgtac 693
|||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||
Sbjct: 607 aggaacaaaatttcagctgggtgggcatattcggaagttaaaccaaagggtgtggcatac 548
Query: 694 tcatggtggacgctgtgaacgtgtttgtatagccatttcgtatgcaatgccctgtgcccc 753
|| ||||||||||||||||| || |||||||||||||||||||||| |||||||||||||
Sbjct: 547 tcgtggtggacgctgtgaacatgcttgtatagccatttcgtatgcagtgccctgtgcccc 488
Query: 754 caatagaatataaaatcctcaaggacaaagtagaaaagaacttgagatacaacaaccgac 813
|| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 487 cagtagaatataaaatcctcaaggccaaagtagaaaagaacttgagatacaacaaccgtc 428
Query: 814 caatgtggcaaaggaagagagctcctgagacccatgaatttgaaggcaggatacgagaaa 873
|||||||| | ||||||||||||||| |||||||| ||| |||||||||| || ||||||
Sbjct: 427 caatgtggtagaggaagagagctcctaagacccataaatctgaaggcagggtatgagaaa 368
Query: 874 atcatgacaggcaggttcacacatacatggtagagaatgaggcgcaagacacatctgttt 933
||||||||||||||||||||||| |||||||| ||||| || ||||||||||||||||||
Sbjct: 367 atcatgacaggcaggttcacacagacatggtacagaataagacgcaagacacatctgttt 308
Query: 934 tggtaagcagaggtgttgctcttcttctggatcttgtacttggcgaagagtccgaagcgc 993
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 tggtaagcaggggtgttgctcttcttctggatcttgtacttggcgaagagtccgaagcgc 248
Query: 994 tcgaagaggagggaggggaggccggagaggaagaagacggtctcgtggagcaggaaggtg 1053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tcgaagaggagggaggggaggccggagaggaagaagacggtctcgtggagcaggaaggtg 188
Query: 1054 acgacggtggcgagctggaactcggtgaagttggcgatcaggagctgccacgctgagtcg 1113
||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||
Sbjct: 187 acgacggtggcgagctggaactcggtgaagttggcgatcaggacctgccacgcggactcg 128
Query: 1114 atggctgacatgggcgccgccattgtgagagagatagatcgccggcggcgaagatgccga 1173
||||| |||||||||||||||||| ||| |||||||||||||||||| |||
Sbjct: 127 atggcggacatgggcgccgccattatga----------tcgccggcggcgaagatg-cga 79
Query: 1174 ggaggggagaggg-gaggctgagcctggcctg 1204
||||||||| ||| ||| | ||||||||||||
Sbjct: 78 ggaggggagcgggtgagccagagcctggcctg 47
>gb|CD209053.1|CD209053 HS1_45_F05.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_45_F05_A012 5', mRNA sequence
Length = 674
Score = 866 bits (437), Expect = 0.0
Identities = 585/632 (92%), Gaps = 13/632 (2%)
Strand = Plus / Minus
Query: 574 agccacagggtgaagagatgagggccagtaagagcaggaccaacaactggggcgaatccc 633
|||||||||||||| |||||||||||||||||||||||||| || |||| ||||||||||
Sbjct: 674 agccacagggtgaacagatgagggccagtaagagcaggaccgaccactgtggcgaatccc 615
Query: 634 aggaacaaaatttcagctgggtgggcatattccgatgttaaaccaaagggtgtggcgtac 693
|||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||
Sbjct: 614 aggaacaaaatttcagctgggtgggcatattcggaagttaaaccaaagggtgtggcatac 555
Query: 694 tcatggtggacgctgtgaacgtgtttgtatagccatttcgtatgcaatgccctgtgcccc 753
|| ||||||||||||||||| || |||||||||||||||||||||| |||||||||||||
Sbjct: 554 tcgtggtggacgctgtgaacatgcttgtatagccatttcgtatgcagtgccctgtgcccc 495
Query: 754 caatagaatataaaatcctcaaggacaaagtagaaaagaacttgagatacaacaaccgac 813
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 494 cagtagaatataaaatcctcaaggacaaagtagaaaagaacttgagatacaacaaccgtc 435
Query: 814 caatgtggcaaaggaagagagctcctgagacccatgaatttgaaggcaggatacgagaaa 873
|||||||| | ||||||||||||||| |||||||| ||| |||||||||| || ||||||
Sbjct: 434 caatgtggtagaggaagagagctcctaagacccataaatctgaaggcagggtatgagaaa 375
Query: 874 atcatgacaggcaggttcacacatacatggtagagaatgaggcgcaagacacatctgttt 933
||||||||||||||||||||||| |||||||| ||||| || ||||||||||||||||||
Sbjct: 374 atcatgacaggcaggttcacacagacatggtacagaataagacgcaagacacatctgttt 315
Query: 934 tggtaagcagaggtgttgctcttcttctggatcttgtacttggcgaagagtccgaagcgc 993
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tggtaagcaggggtgttgctcttcttctggatcttgtacttggcgaagagtccgaagcgc 255
Query: 994 tcgaagaggagggaggggaggccggagaggaagaagacggtctcgtggagcaggaaggtg 1053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tcgaagaggagggaggggaggccggagaggaagaagacggtctcgtggagcaggaaggtg 195
Query: 1054 acgacggtggcgagctggaactcggtgaagttggcgatcaggagctgccacgctgagtcg 1113
||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||
Sbjct: 194 acgacggtggcgagctggaactcggtgaagttggcgatcaggacctgccacgcggactcg 135
Query: 1114 atggctgacatgggcgccgccattgtgagagagatagatcgccggcggcgaagatgccga 1173
||||| | | |||||||||||||| ||| |||||||||||||||||| |||
Sbjct: 134 atggc-ggcgtgggcgccgccattatga----------tcgccggcggcgaagatg-cga 87
Query: 1174 ggaggggagaggg-gaggctgagcctggcctg 1204
||||||||| ||| ||| | ||||||||||||
Sbjct: 86 ggaggggagcgggtgagccagagcctggcctg 55
>gb|CF486239.1|CF486239 POL1_36_C08.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_36_C08_A002 5', mRNA sequence
Length = 665
Score = 862 bits (435), Expect = 0.0
Identities = 579/626 (92%), Gaps = 12/626 (1%)
Strand = Plus / Minus
Query: 580 agggtgaagagatgagggccagtaagagcaggaccaacaactggggcgaatcccaggaac 639
||||||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||
Sbjct: 665 agggtgaccagatgagggccagtaagagcaggcccaaccactgtggcgaatcccaggaac 606
Query: 640 aaaatttcagctgggtgggcatattccgatgttaaaccaaagggtgtggcgtactcatgg 699
|||||||||||||||||||||||||| || |||||||||||||||||||| ||||| |||
Sbjct: 605 aaaatttcagctgggtgggcatattcggaagttaaaccaaagggtgtggcatactcgtgg 546
Query: 700 tggacgctgtgaacgtgtttgtatagccatttcgtatgcaatgccctgtgcccccaatag 759
|||||||||||||| || |||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 545 tggacgctgtgaacatgcttgtatagccatttcgtatgcagtgccctgtgcccccagtag 486
Query: 760 aatataaaatcctcaaggacaaagtagaaaagaacttgagatacaacaaccgaccaatgt 819
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 485 aatataaaatcctcaaggacaaagtagaaaagaacttgagatacaacaaccgtccaatgt 426
Query: 820 ggcaaaggaagagagctcctgagacccatgaatttgaaggcaggatacgagaaaatcatg 879
|| | ||| ||||||||||| |||||||| ||| |||||||||| || ||||||||||||
Sbjct: 425 ggtagagggagagagctcctaagacccataaatctgaaggcagggtatgagaaaatcatg 366
Query: 880 acaggcaggttcacacatacatggtagagaatgaggcgcaagacacatctgttttggtaa 939
||||||||||||||||| |||||||| ||||| || ||||||||||||||||||||||||
Sbjct: 365 acaggcaggttcacacagacatggtacagaataagacgcaagacacatctgttttggtaa 306
Query: 940 gcagaggtgttgctcttcttctggatcttgtacttggcgaagagtccgaagcgctcgaag 999
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gcaggggtgttgctcttcttctggatcttgtacttggcgaagagtccgaagcgctcgaag 246
Query: 1000 aggagggaggggaggccggagaggaagaagacggtctcgtggagcaggaaggtgacgacg 1059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 aggagggaggggaggccggagaggaagaagacggtctcgtggagcaggaaggtgacgacg 186
Query: 1060 gtggcgagctggaactcggtgaagttggcgatcaggagctgccacgctgagtcgatggct 1119
||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||
Sbjct: 185 gtggcgagctggaactcggtgaagttggcgatcaggacctgccacgcggactcgatggcg 126
Query: 1120 gacatgggcgccgccattgtgagagagatagatcgccggcggcgaagatgccgaggaggg 1179
|||||||||||||||||| ||| |||||||||||||||||| |||||||||
Sbjct: 125 gacatgggcgccgccattatga----------tcgccggcggcgaagatg-cgaggaggg 77
Query: 1180 gagaggg-gaggctgagcctggcctg 1204
||| ||| ||| | ||||||||||||
Sbjct: 76 gagcgggtgagccagagcctggcctg 51
>gb|CN142308.1|CN142308 WOUND1_9_D10.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_9_D10_A002 3', mRNA sequence
Length = 730
Score = 852 bits (430), Expect = 0.0
Identities = 490/510 (96%)
Strand = Plus / Minus
Query: 312 ctgagcagcttccacaatctacagatttttcccttctttctcctcaatggtctttgcctt 371
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 517 ctgagcagcttccacaatctacagattcttcccttctttctcctcaatggtctttgcctt 458
Query: 372 gcgataatccttgtccgtgccgaacaaccagtccatgtaaacaaatgttgaggcatagtt 431
|||||||||||||||||| || |||||||||||||| ||||||||||| |||||||||||
Sbjct: 457 gcgataatccttgtccgtcccaaacaaccagtccatataaacaaatgtcgaggcatagtt 398
Query: 432 ccctgactttgtgtacagcacacggtgatggtagtcatggaagtccgagccgccatacag 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ccctgactttgtgtacagcacacggtgatggtagtcatggaagtccgagccgccatacag 338
Query: 492 cggcaggaaatttgatgggctccatgggaagtgatagccgctgtgagcttcaactgtctc 551
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tggcaggaaatttgatgggctccatgggaagtgatagccgctgtgagcttcaactgtctc 278
Query: 552 caaaaccctcaacaccatccacagccacagggtgaagagatgagggccagtaagagcagg 611
||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 277 caatatcctcaacaccatccacagccacagggtgaacagatgagggccagtaagagcagg 218
Query: 612 accaacaactggggcgaatcccaggaacaaaatttcagctgggtgggcatattccgatgt 671
|||||| |||| |||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 217 accaaccactgtggcgaatcccaggaacaaaatttcagctgggtgggcatattcggaagt 158
Query: 672 taaaccaaagggtgtggcgtactcatggtggacgctgtgaacgtgtttgtatagccattt 731
|||||||||||||||||| ||||| ||||||||||||||||| || ||||||||||||||
Sbjct: 157 taaaccaaagggtgtggcatactcgtggtggacgctgtgaacatgcttgtatagccattt 98
Query: 732 cgtatgcaatgccctgtgcccccaatagaatataaaatcctcaaggacaaagtagaaaag 791
|||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 97 cgtatgcagtgccctgtgcccccagtagaatataaaatcctcaaggacaaagtagaaaag 38
Query: 792 aacttgagatacaacaaccgaccaatgtgg 821
|||||||||||||||||||| |||||||||
Sbjct: 37 aacttgagatacaacaaccgtccaatgtgg 8
Score = 188 bits (95), Expect = 9e-046
Identities = 169/193 (87%), Gaps = 3/193 (1%)
Strand = Plus / Minus
Query: 126 gaggagatgacaaatcatcaaattcagttcatgacagaccagggccaccagggcctcatt 185
|||||||| |||||| |||| |||||||||||||||||||| || | ||||| |||||||
Sbjct: 718 gaggagattacaaattatcagattcagttcatgacagaccaaggtcgccaggacctcatt 659
Query: 186 cttgatcatagcaaacacaggaaatcaatatctcaacctatagtatcgatggtcaggaga 245
|||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| |
Sbjct: 658 cttgatcatagcaaacacaggaaatcaaaatctcaacctatagtatggatcgtcaggcaa 599
Query: 246 taa---actgactgtttctagggtgcatccatatctccttccatgagtgaaactctatcg 302
||| ||||| |||||||||||||| ||||| ||| ||||||||| |||||||| |
Sbjct: 598 taactgactgagtgtttctagggtgcgtccatctctttttccatgagctcaactctattg 539
Query: 303 ccagtcttgctga 315
|||||||||||||
Sbjct: 538 ccagtcttgctga 526
>gb|CN150372.1|CN150372 WOUND1_68_E07.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_68_E07_A002 5', mRNA sequence
Length = 601
Score = 833 bits (420), Expect = 0.0
Identities = 528/564 (93%)
Strand = Plus / Minus
Query: 574 agccacagggtgaagagatgagggccagtaagagcaggaccaacaactggggcgaatccc 633
|||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 601 agccacagggtgaacagatgagggccagtaagagcaggaccaaccactgtggcgaatccc 542
Query: 634 aggaacaaaatttcagctgggtgggcatattccgatgttaaaccaaagggtgtggcgtac 693
||||||||||||||||||| |||||||||||| || |||||||||||||||||||| |||
Sbjct: 541 aggaacaaaatttcagctgcgtgggcatattcggaagttaaaccaaagggtgtggcatac 482
Query: 694 tcatggtggacgctgtgaacgtgtttgtatagccatttcgtatgcaatgccctgtgcccc 753
|| |||||||||||||| || || |||||||||||||||||||| | |||||||||||||
Sbjct: 481 tcgtggtggacgctgtgcacatgcttgtatagccatttcgtatgtagtgccctgtgcccc 422
Query: 754 caatagaatataaaatcctcaaggacaaagtagaaaagaacttgagatacaacaaccgac 813
|| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 421 cagtagaatataatatcctcaaggacaaagtagaaaagaacttgagatacaacaaccgtc 362
Query: 814 caatgtggcaaaggaagagagctcctgagacccatgaatttgaaggcaggatacgagaaa 873
|||||||| | | ||||||||||||| || ||||| ||| |||||||||| || ||||||
Sbjct: 361 caatgtggtagacgaagagagctcctaagccccataaatctgaaggcagggtatgagaaa 302
Query: 874 atcatgacaggcaggttcacacatacatggtagagaatgaggcgcaagacacatctgttt 933
||||||||||||||||||||||| |||||||| ||||| || ||||||||||||||||||
Sbjct: 301 atcatgacaggcaggttcacacagacatggtacagaataagacgcaagacacatctgttt 242
Query: 934 tggtaagcagaggtgttgctcttcttctggatcttgtacttggcgaagagtccgaagcgc 993
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tggtaagcaggggtgttgctcttcttctggatcttgtacttggcgaagagtccgaagcgc 182
Query: 994 tcgaagaggagggaggggaggccggagaggaagaagacggtctcgtggagcaggaaggtg 1053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcgaagaggagggaggggaggccggagaggaagaagacggtctcgtggagcaggaaggtg 122
Query: 1054 acgacggtggcgagctggaactcggtgaagttggcgatcaggagctgccacgctgagtcg 1113
||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| || |||
Sbjct: 121 acgacggtggcgagctgcaactcggtgaagtcggcgatcaggacctgccacgcggactcg 62
Query: 1114 atggctgacatgggcgccgccatt 1137
||||| ||||||||||||||||||
Sbjct: 61 atggcggacatgggcgccgccatt 38
Score = 50.1 bits (25), Expect = 5e-004
Identities = 32/33 (96%), Gaps = 1/33 (3%)
Strand = Plus / Minus
Query: 1150 gatcgccggcggcgaagatgccgaggaggggag 1182
|||||||||||||||||||| ||||||||||||
Sbjct: 35 gatcgccggcggcgaagatg-cgaggaggggag 4
>gb|BI351339.1|BI351339 IP1_70_C11.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 526
Score = 813 bits (410), Expect = 0.0
Identities = 491/518 (94%)
Strand = Plus / Minus
Query: 385 tccgtgccgaacaaccagtccatgtaaacaaatgttgaggcatagttccctgactttgtg 444
||||| || |||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 526 tccgtcccaaacaaccagtccatataaacaaatgtcgaggcatagttccctgactttgtg 467
Query: 445 tacagcacacggtgatggtagtcatggaagtccgagccgccatacagcggcaggaaattt 504
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 466 tacagcacacggtgatggtagtcatggaagtccgagccgccatacagtggcaggaaattt 407
Query: 505 gatgggctccatgggaagtgatagccgctgtgagcttcaactgtctccaaaaccctcaac 564
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 406 gatgggctccatgggaagtgatagccgctgtgagcttcaactgtctccaatatcctcaac 347
Query: 565 accatccacagccacagggtgaagagatgagggccagtaagagcaggaccaacaactggg 624
||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |
Sbjct: 346 accatccacagccacagggtgaacagatgagggccagtaagagcaggaccaaccactgtg 287
Query: 625 gcgaatcccaggaacaaaatttcagctgggtgggcatattccgatgttaaaccaaagggt 684
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 286 gcgaatcccaggaacaaaatttcagctgggtgggcatattcggaagttaaaccaaagggt 227
Query: 685 gtggcgtactcatggtggacgctgtgaacgtgtttgtatagccatttcgtatgcaatgcc 744
||||| ||||| ||||||||||||||||| || |||||||||||||||||||||| ||||
Sbjct: 226 gtggcatactcgtggtggacgctgtgaacatgcttgtatagccatttcgtatgcagtgcc 167
Query: 745 ctgtgcccccaatagaatataaaatcctcaaggacaaagtagaaaagaacttgagataca 804
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 ctgtgcccccagtagaatataaaatcctcaaggacaaagtagaaaagaacttgagataca 107
Query: 805 acaaccgaccaatgtggcaaaggaagagagctcctgagacccatgaatttgaaggcagga 864
||||||| ||||||||| | ||||||||||||||| |||||||| ||| ||||||||||
Sbjct: 106 acaaccgtccaatgtggtagaggaagagagctcctaagacccataaatctgaaggcaggg 47
Query: 865 tacgagaaaatcatgacaggcaggttcacacatacatg 902
|| ||||||||||||||||||||||||||||| |||||
Sbjct: 46 tatgagaaaatcatgacaggcaggttcacacagacatg 9
>gb|BG488367.1|BG488367 RHIZ2_62_G10.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 595
Score = 807 bits (407), Expect = 0.0
Identities = 536/578 (92%), Gaps = 12/578 (2%)
Strand = Plus / Minus
Query: 628 aatcccaggaacaaaatttcagctgggtgggcatattccgatgttaaaccaaagggtgtg 687
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 595 aatcccaggaacaaaatttcagctgggtgggcatattcggaagttaaaccaaagggtgtg 536
Query: 688 gcgtactcatggtggacgctgtgaacgtgtttgtatagccatttcgtatgcaatgccctg 747
|| ||||| ||||||||||||||||| || |||||||||||||| ||||||| |||||||
Sbjct: 535 gcatactcgtggtggacgctgtgaacatgcttgtatagccattttgtatgcagtgccctg 476
Query: 748 tgcccccaatagaatataaaatcctcaaggacaaagtagaaaagaacttgagatacaaca 807
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 tgcccccagtagaatataaaatcctcaaggacaaagtagaaaagaacttgagatacaaca 416
Query: 808 accgaccaatgtggcaaaggaagagagctcctgagacccatgaatttgaaggcaggatac 867
|||| ||||||||| | ||||||||||||||| |||||||| ||| |||||||||| ||
Sbjct: 415 accgtccaatgtggtagaggaagagagctcctaagacccataaatctgaaggcagggtat 356
Query: 868 gagaaaatcatgacaggcaggttcacacatacatggtagagaatgaggcgcaagacacat 927
||||||||||||||||||||||||||||| |||||||| ||||| || ||||||||||||
Sbjct: 355 gagaaaatcatgacaggcaggttcacacagacatggtacagaataagacgcaagacacat 296
Query: 928 ctgttttggtaagcagaggtgttgctcttcttctggatcttgtacttggcgaagagtccg 987
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 ctgttttggtaagcaggggtgttgctcttcttctggatcttgtacttggcgaagagtccg 236
Query: 988 aagcgctcgaagaggagggaggggaggccggagaggaagaagacggtctcgtggagcagg 1047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 aagcgctcgaagaggagggaggggaggccggagaggaagaagacggtctcgtggagcagg 176
Query: 1048 aaggtgacgacggtggcgagctggaactcggtgaagttggcgatcaggagctgccacgct 1107
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 175 aaggtgacgacggtggcgagctggaactcggtgaagttggcgatcaggacctgccacgcg 116
Query: 1108 gagtcgatggctgacatgggcgccgccattgtgagagagatagatcgccggcggcgaaga 1167
|| |||||||| |||||||||||||||||| ||| ||||||||||||||||
Sbjct: 115 gactcgatggcggacatgggcgccgccattatga----------tcgccggcggcgaaga 66
Query: 1168 tgccgaggaggggagaggg-gaggctgagcctggcctg 1204
|| |||||||||||| ||| ||| | ||||||||||||
Sbjct: 65 tg-cgaggaggggagcgggtgagccagagcctggcctg 29
>gb|CF489240.1|CF489240 POL1_55_G01.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_55_G01_A002 5', mRNA sequence
Length = 596
Score = 801 bits (404), Expect = 0.0
Identities = 533/575 (92%), Gaps = 12/575 (2%)
Strand = Plus / Minus
Query: 631 cccaggaacaaaatttcagctgggtgggcatattccgatgttaaaccaaagggtgtggcg 690
|||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 596 cccaggaacaaaatctcagctgggtgggcatattcggaagttaaaccaaagggtgtggca 537
Query: 691 tactcatggtggacgctgtgaacgtgtttgtatagccatttcgtatgcaatgccctgtgc 750
||||| ||||||||||||||||| || |||||||||||||||||||||| ||||||||||
Sbjct: 536 tactcgtggtggacgctgtgaacatgcttgtatagccatttcgtatgcagtgccctgtgc 477
Query: 751 ccccaatagaatataaaatcctcaaggacaaagtagaaaagaacttgagatacaacaacc 810
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ccccagtagaatataaaatcctcaaggacaaagtagaaaagaacttgagatacaacaacc 417
Query: 811 gaccaatgtggcaaaggaagagagctcctgagacccatgaatttgaaggcaggatacgag 870
| ||||||||| | ||||||||||||||| |||||||| ||| |||||||||| || |||
Sbjct: 416 gtccaatgtggtagaggaagagagctcctaagacccataaatctgaaggcagggtatgag 357
Query: 871 aaaatcatgacaggcaggttcacacatacatggtagagaatgaggcgcaagacacatctg 930
|||||||||||||||||||||||||| |||||||| ||||| || |||||||||||||||
Sbjct: 356 aaaatcatgacaggcaggttcacacagacatggtacagaataagacgcaagacacatctg 297
Query: 931 ttttggtaagcagaggtgttgctcttcttctggatcttgtacttggcgaagagtccgaag 990
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 ttttggtaagcaggggtgttgctcttcttctggatcttgtacttggcgaagagtccgaag 237
Query: 991 cgctcgaagaggagggaggggaggccggagaggaagaagacggtctcgtggagcaggaag 1050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 cgctcgaagaggagggaggggaggccggagaggaagaagacggtctcgtggagcaggaag 177
Query: 1051 gtgacgacggtggcgagctggaactcggtgaagttggcgatcaggagctgccacgctgag 1110
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 176 gtgacgacggtggcgagctggaactcggtgaagttggcgatcaggacctgccacgcggac 117
Query: 1111 tcgatggctgacatgggcgccgccattgtgagagagatagatcgccggcggcgaagatgc 1170
|||||||| |||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 116 tcgatggcggacatgggcgccgccattatga----------tcgccggcggcgaagatg- 68
Query: 1171 cgaggaggggagaggg-gaggctgagcctggcctg 1204
|||||||||||| ||| ||| | ||||||||||||
Sbjct: 67 cgaggaggggagcgggtgagccagagcctggcctg 33
>gb|BG465494.1|BG465494 RHIZ2_45_C07.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 584
Score = 785 bits (396), Expect = 0.0
Identities = 525/567 (92%), Gaps = 12/567 (2%)
Strand = Plus / Minus
Query: 639 caaaatttcagctgggtgggcatattccgatgttaaaccaaagggtgtggcgtactcatg 698
||||||||||||||||||||||||||| || |||||||||||||||||||| ||||| ||
Sbjct: 584 caaaatttcagctgggtgggcatattcggaagttaaaccaaagggtgtggcatactcgtg 525
Query: 699 gtggacgctgtgaacgtgtttgtatagccatttcgtatgcaatgccctgtgcccccaata 758
||||||||||||||| || |||||||||||||| ||||||| ||||||||||||||| ||
Sbjct: 524 gtggacgctgtgaacatgcttgtatagccattttgtatgcagtgccctgtgcccccagta 465
Query: 759 gaatataaaatcctcaaggacaaagtagaaaagaacttgagatacaacaaccgaccaatg 818
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 464 gaatataaaatcctcaaggacaaagtagaaaagaacttgagatacaacaaccgtccaatg 405
Query: 819 tggcaaaggaagagagctcctgagacccatgaatttgaaggcaggatacgagaaaatcat 878
||| | ||||||||||||||| |||||||| ||| |||||||||| || |||||||||||
Sbjct: 404 tggtagaggaagagagctcctaagacccataaatctgaaggcagggtatgagaaaatcat 345
Query: 879 gacaggcaggttcacacatacatggtagagaatgaggcgcaagacacatctgttttggta 938
|||||||||||||||||| |||||||| ||||| || |||||||||||||||||||||||
Sbjct: 344 gacaggcaggttcacacagacatggtacagaataagacgcaagacacatctgttttggta 285
Query: 939 agcagaggtgttgctcttcttctggatcttgtacttggcgaagagtccgaagcgctcgaa 998
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 agcaggggtgttgctcttcttctggatcttgtacttggcgaagagtccgaagcgctcgaa 225
Query: 999 gaggagggaggggaggccggagaggaagaagacggtctcgtggagcaggaaggtgacgac 1058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 gaggagggaggggaggccggagaggaagaagacggtctcgtggagcaggaaggtgacgac 165
Query: 1059 ggtggcgagctggaactcggtgaagttggcgatcaggagctgccacgctgagtcgatggc 1118
|||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||
Sbjct: 164 ggtggcgagctggaactcggtgaagttggcgatcaggacctgccacgcggactcgatggc 105
Query: 1119 tgacatgggcgccgccattgtgagagagatagatcgccggcggcgaagatgccgaggagg 1178
|||||||||||||||||| ||| |||||||||||||||||| ||||||||
Sbjct: 104 ggacatgggcgccgccattatga----------tcgccggcggcgaagatg-cgaggagg 56
Query: 1179 ggagaggg-gaggctgagcctggcctg 1204
|||| ||| ||| | ||||||||||||
Sbjct: 55 ggagcgggtgagccagagcctggcctg 29
>gb|CX621919.1|CX621919 GABR1_61_A05.b2_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_61_A05_A002 3', mRNA sequence
Length = 681
Score = 785 bits (396), Expect = 0.0
Identities = 453/472 (95%)
Strand = Plus / Minus
Query: 312 ctgagcagcttccacaatctacagatttttcccttctttctcctcaatggtctttgcctt 371
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 472 ctgagcagcttccacaatctacagattcttcccttctttctcctcaatggtctttgcctt 413
Query: 372 gcgataatccttgtccgtgccgaacaaccagtccatgtaaacaaatgttgaggcatagtt 431
|||||||||||||||||| || |||||||||||||| ||||||||||| |||||||||||
Sbjct: 412 gcgataatccttgtccgtcccaaacaaccagtccatataaacaaatgtcgaggcatagtt 353
Query: 432 ccctgactttgtgtacagcacacggtgatggtagtcatggaagtccgagccgccatacag 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 ccctgactttgtgtacagcacacggtgatggtagtcatggaagtccgagccgccatacag 293
Query: 492 cggcaggaaatttgatgggctccatgggaagtgatagccgctgtgagcttcaactgtctc 551
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 tggcaggaaatttgatgggctccatgggaagtgatagccgctgtgagcttcaactgtctc 233
Query: 552 caaaaccctcaacaccatccacagccacagggtgaagagatgagggccagtaagagcagg 611
||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 232 caatatcctcaacaccatccacagccacagggtgaacagatgagggccagtaagagcagg 173
Query: 612 accaacaactggggcgaatcccaggaacaaaatttcagctgggtgggcatattccgatgt 671
|||||| |||| |||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 172 accaaccactgtggcgaatcccaggaacaaaatttcagctgggtgggcatattcggaagt 113
Query: 672 taaaccaaagggtgtggcgtactcatggtggacgctgtgaacgtgtttgtatagccattt 731
|||||||||||||||||| ||||| ||||||||||||||||| || ||||||||||||||
Sbjct: 112 taaaccaaagggtgtggcatactcgtggtggacgctgtgaacatgcttgtatagccattt 53
Query: 732 cgtatgcaatgccctgtgcccccaatagaatataaaatcctcaaggacaaag 783
|||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 52 cgtatgcagtgccctgtgcccccagtagaatataaaatcctcaaggacaaag 1
Score = 172 bits (87), Expect = 5e-041
Identities = 155/177 (87%), Gaps = 3/177 (1%)
Strand = Plus / Minus
Query: 142 atcaaattcagttcatgacagaccagggccaccagggcctcattcttgatcatagcaaac 201
|||| |||||||||||||||||||| || | ||||| |||||||||||||||||||||||
Sbjct: 657 atcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatcatagcaaac 598
Query: 202 acaggaaatcaatatctcaacctatagtatcgatggtcaggagataa---actgactgtt 258
|||||||||||| ||||||||||||||||| ||| |||||| |||| ||||| ||||
Sbjct: 597 acaggaaatcaaaatctcaacctatagtatggatcgtcaggcaataactgactgagtgtt 538
Query: 259 tctagggtgcatccatatctccttccatgagtgaaactctatcgccagtcttgctga 315
|||||||||| ||||| ||| ||||||||| |||||||| ||||||||||||||
Sbjct: 537 tctagggtgcgtccatctctttttccatgagctcaactctattgccagtcttgctga 481
>gb|CF426928.1|CF426928 PH1_2_G08.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_2_G08_A002 5', mRNA sequence
Length = 600
Score = 783 bits (395), Expect = 0.0
Identities = 524/566 (92%), Gaps = 12/566 (2%)
Strand = Plus / Minus
Query: 640 aaaatttcagctgggtgggcatattccgatgttaaaccaaagggtgtggcgtactcatgg 699
|||||||||||||||||||||||||| || |||||||||||||||||||| ||||| |||
Sbjct: 600 aaaatttcagctgggtgggcatattcggaagttaaaccaaagggtgtggcatactcgtgg 541
Query: 700 tggacgctgtgaacgtgtttgtatagccatttcgtatgcaatgccctgtgcccccaatag 759
|||||||||||||| || |||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 540 tggacgctgtgaacatgcttgtatagccatttcgtatgcagtgccctgtgcccccagtag 481
Query: 760 aatataaaatcctcaaggacaaagtagaaaagaacttgagatacaacaaccgaccaatgt 819
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 480 aatataaaatcctcaaggacaaagtagaaaagaacttgagatacaacaaccgtccaatgt 421
Query: 820 ggcaaaggaagagagctcctgagacccatgaatttgaaggcaggatacgagaaaatcatg 879
|| | ||||||||||||||| |||||||| ||| |||||||||| || ||||||||||||
Sbjct: 420 ggtagaggaagagagctcctaagacccataaatctgaaggcagggtatgagaaaatcatg 361
Query: 880 acaggcaggttcacacatacatggtagagaatgaggcgcaagacacatctgttttggtaa 939
||||||||||||||||| |||||||| ||||| || ||||||||||||||||||||||||
Sbjct: 360 acaggcaggttcacacagacatggtacagaataagacgcaagacacatctgttttggtaa 301
Query: 940 gcagaggtgttgctcttcttctggatcttgtacttggcgaagagtccgaagcgctcgaag 999
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gcaggggtgttgctcttcttctggatcttgtacttggcgaagagtccgaagcgctcgaag 241
Query: 1000 aggagggaggggaggccggagaggaagaagacggtctcgtggagcaggaaggtgacgacg 1059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 aggagggaggggaggccggagaggaagaagacggtctcgtggagcaggaaggtgacgacg 181
Query: 1060 gtggcgagctggaactcggtgaagttggcgatcaggagctgccacgctgagtcgatggct 1119
||||||||||| ||||||||||||||||||||||||| ||||||||| || ||||||||
Sbjct: 180 gtggcgagctgaaactcggtgaagttggcgatcaggacctgccacgcggactcgatggcg 121
Query: 1120 gacatgggcgccgccattgtgagagagatagatcgccggcggcgaagatgccgaggaggg 1179
|||||||||||||||||| ||| |||||||||||||||||| |||||||||
Sbjct: 120 gacatgggcgccgccattatga----------tcgccggcggcgaagatg-cgaggaggg 72
Query: 1180 gagaggg-gaggctgagcctggcctg 1204
||| ||| ||| | ||||||||||||
Sbjct: 71 gagcgggtgagccagagcctggcctg 46
>gb|CD235440.1|CD235440 SS1_29_F07.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA clone
SS1_29_F07_A012 5', mRNA sequence
Length = 609
Score = 781 bits (394), Expect = 0.0
Identities = 520/561 (92%), Gaps = 12/561 (2%)
Strand = Plus / Minus
Query: 645 ttcagctgggtgggcatattccgatgttaaaccaaagggtgtggcgtactcatggtggac 704
||||||||||||||||||||| || |||||||||||||||||||| ||||| ||||||||
Sbjct: 609 ttcagctgggtgggcatattcggaagttaaaccaaagggtgtggcatactcgtggtggac 550
Query: 705 gctgtgaacgtgtttgtatagccatttcgtatgcaatgccctgtgcccccaatagaatat 764
||||||||| || |||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 549 gctgtgaacatgcttgtatagccatttcgtatgcagtgccctgtgcccccagtagaatat 490
Query: 765 aaaatcctcaaggacaaagtagaaaagaacttgagatacaacaaccgaccaatgtggcaa 824
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 489 aaaatcctcaaggacaaagtagaaaagaacttgagatacaacaaccgtccaatgtggtag 430
Query: 825 aggaagagagctcctgagacccatgaatttgaaggcaggatacgagaaaatcatgacagg 884
||||||||||||||| |||||||| ||| |||||||||| || |||||||||||||||||
Sbjct: 429 aggaagagagctcctaagacccataaatctgaaggcagggtatgagaaaatcatgacagg 370
Query: 885 caggttcacacatacatggtagagaatgaggcgcaagacacatctgttttggtaagcaga 944
|||||||||||| |||||||| ||||| || ||||||||||||||||||||||||||||
Sbjct: 369 caggttcacacagacatggtacagaataagacgcaagacacatctgttttggtaagcagg 310
Query: 945 ggtgttgctcttcttctggatcttgtacttggcgaagagtccgaagcgctcgaagaggag 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ggtgttgctcttcttctggatcttgtacttggcgaagagtccgaagcgctcgaagaggag 250
Query: 1005 ggaggggaggccggagaggaagaagacggtctcgtggagcaggaaggtgacgacggtggc 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ggaggggaggccggagaggaagaagacggtctcgtggagcaggaaggtgacgacggtggc 190
Query: 1065 gagctggaactcggtgaagttggcgatcaggagctgccacgctgagtcgatggctgacat 1124
|||||||||||||||||||||||||||||||| ||||||||| || |||||||| |||||
Sbjct: 189 gagctggaactcggtgaagttggcgatcaggacctgccacgcggactcgatggcggacat 130
Query: 1125 gggcgccgccattgtgagagagatagatcgccggcggcgaagatgccgaggaggggagag 1184
||||||||||||| ||| |||||||||||||||||| |||||||||||| |
Sbjct: 129 gggcgccgccattatga----------tcgccggcggcgaagatg-cgaggaggggagcg 81
Query: 1185 gg-gaggctgagcctggcctg 1204
|| ||| | ||||||||||||
Sbjct: 80 ggtgagccagagcctggcctg 60
>gb|CF427487.1|CF427487 PH1_1_F06.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_1_F06_A002 5', mRNA sequence
Length = 592
Score = 773 bits (390), Expect = 0.0
Identities = 516/557 (92%), Gaps = 12/557 (2%)
Strand = Plus / Minus
Query: 649 gctgggtgggcatattccgatgttaaaccaaagggtgtggcgtactcatggtggacgctg 708
||||||||||||||||| || |||||||||||||||||||| ||||| ||||||||||||
Sbjct: 592 gctgggtgggcatattcggaagttaaaccaaagggtgtggcatactcgtggtggacgctg 533
Query: 709 tgaacgtgtttgtatagccatttcgtatgcaatgccctgtgcccccaatagaatataaaa 768
||||| || |||||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 532 tgaacatgcttgtatagccatttcgtatgcagtgccctgtgcccccagtagaatataaaa 473
Query: 769 tcctcaaggacaaagtagaaaagaacttgagatacaacaaccgaccaatgtggcaaagga 828
||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||
Sbjct: 472 tcctcaaggacaaagtagaaaagaacttgagatacaacaaccgtccaatgtggtagagga 413
Query: 829 agagagctcctgagacccatgaatttgaaggcaggatacgagaaaatcatgacaggcagg 888
||||||||||| |||||||| ||| |||||||||| || |||||||||||||||||||||
Sbjct: 412 agagagctcctaagacccataaatctgaaggcagggtatgagaaaatcatgacaggcagg 353
Query: 889 ttcacacatacatggtagagaatgaggcgcaagacacatctgttttggtaagcagaggtg 948
|||||||| |||||||| ||||| || |||||||||||||||||||||||||||| ||||
Sbjct: 352 ttcacacagacatggtacagaataagacgcaagacacatctgttttggtaagcaggggtg 293
Query: 949 ttgctcttcttctggatcttgtacttggcgaagagtccgaagcgctcgaagaggagggag 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 ttgctcttcttctggatcttgtacttggcgaagagtccgaagcgctcgaagaggagggag 233
Query: 1009 gggaggccggagaggaagaagacggtctcgtggagcaggaaggtgacgacggtggcgagc 1068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 gggaggccggagaggaagaagacggtctcgtggagcaggaaggtgacgacggtggcgagc 173
Query: 1069 tggaactcggtgaagttggcgatcaggagctgccacgctgagtcgatggctgacatgggc 1128
|||||||||||||||||||||||||||| ||||||||| || |||||||| |||||||||
Sbjct: 172 tggaactcggtgaagttggcgatcaggacctgccacgcggactcgatggcggacatgggc 113
Query: 1129 gccgccattgtgagagagatagatcgccggcggcgaagatgccgaggaggggagaggg-g 1187
||||||||| ||| |||||||||||||||||| |||||||||||| ||| |
Sbjct: 112 gccgccattatga----------tcgccggcggcgaagatg-cgaggaggggagcgggtg 64
Query: 1188 aggctgagcctggcctg 1204
|| | ||||||||||||
Sbjct: 63 agccagagcctggcctg 47
>gb|CX614714.1|CX614714 GABR1_15_G08.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_15_G08_A002 5', mRNA sequence
Length = 600
Score = 773 bits (390), Expect = 0.0
Identities = 483/514 (93%)
Strand = Plus / Minus
Query: 624 ggcgaatcccaggaacaaaatttcagctgggtgggcatattccgatgttaaaccaaaggg 683
||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||
Sbjct: 600 ggcgaatcccaggaacaaaatttcagcagggtgggcatattcggaagttaaaccaaaggg 541
Query: 684 tgtggcgtactcatggtggacgctgtgaacgtgtttgtatagccatttcgtatgcaatgc 743
|||||| || || ||||||||||||||||| || ||| |||||||||||||||||| |||
Sbjct: 540 tgtggcataatcgtggtggacgctgtgaacatgcttgcatagccatttcgtatgcagtgc 481
Query: 744 cctgtgcccccaatagaatataaaatcctcaaggacaaagtagaaaagaacttgagatac 803
|||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 480 cctgtgcccccagtagaatataaaatcctcaaggtcaaagtagaaaagaacttgagatac 421
Query: 804 aacaaccgaccaatgtggcaaaggaagagagctcctgagacccatgaatttgaaggcagg 863
|||||||| ||||||||| | ||| |||||||||| |||||||| ||| ||||||||||
Sbjct: 420 aacaaccgtccaatgtggtagaggccgagagctcctaagacccataaatctgaaggcagg 361
Query: 864 atacgagaaaatcatgacaggcaggttcacacatacatggtagagaatgaggcgcaagac 923
|| ||||||||||||||||||||||||||||| |||||||| ||||| || ||||||||
Sbjct: 360 gtatgagaaaatcatgacaggcaggttcacacagacatggtacagaataagacgcaagac 301
Query: 924 acatctgttttggtaagcagaggtgttgctcttcttctggatcttgtacttggcgaagag 983
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 300 acatctgttttggtaagcaggggtgttgctcttcttctggatcttgtacttggcgaagag 241
Query: 984 tccgaagcgctcgaagaggagggaggggaggccggagaggaagaagacggtctcgtggag 1043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tccgaagcgctcgaagaggagggaggggaggccggagaggaagaagacggtctcgtggag 181
Query: 1044 caggaaggtgacgacggtggcgagctggaactcggtgaagttggcgatcaggagctgcca 1103
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 180 caggaaggtgacgacggtggcgagctggaactcggtgaagttggcgatcaggacctgcca 121
Query: 1104 cgctgagtcgatggctgacatgggcgccgccatt 1137
||| || |||||||| ||||||||||||||||||
Sbjct: 120 cgcggactcgatggcggacatgggcgccgccatt 87
Score = 50.1 bits (25), Expect = 5e-004
Identities = 32/33 (96%), Gaps = 1/33 (3%)
Strand = Plus / Minus
Query: 1150 gatcgccggcggcgaagatgccgaggaggggag 1182
|||||||||||||||||||| ||||||||||||
Sbjct: 84 gatcgccggcggcgaagatg-cgaggaggggag 53
>gb|BG488217.1|BG488217 RHIZ2_60_H11.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 584
Score = 761 bits (384), Expect = 0.0
Identities = 522/567 (92%), Gaps = 12/567 (2%)
Strand = Plus / Minus
Query: 639 caaaatttcagctgggtgggcatattccgatgttaaaccaaagggtgtggcgtactcatg 698
||||||||||||||||||||||||||| || |||||||||||||||||||| ||||| ||
Sbjct: 584 caaaatttcagctgggtgggcatattcggaagttaaaccaaagggtgtggcatactcgtg 525
Query: 699 gtggacgctgtgaacgtgtttgtatagccatttcgtatgcaatgccctgtgcccccaata 758
||||||||||||||| || |||||||||||||| ||||||| ||||||||||||||| ||
Sbjct: 524 gtggacgctgtgaacatgcttgtatagccattttgtatgcagtgccctgtgcccccagta 465
Query: 759 gaatataaaatcctcaaggacaaagtagaaaagaacttgagatacaacaaccgaccaatg 818
|||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 464 gaatataaaatcttcaaggacaaagtagaaaagaacttgagatacaacaaccgtccaatg 405
Query: 819 tggcaaaggaagagagctcctgagacccatgaatttgaaggcaggatacgagaaaatcat 878
||| | ||||||||||||||| |||||||| ||| |||||||||| || |||||||||||
Sbjct: 404 tggtagaggaagagagctcctaagacccataaatctgaaggcagggtatgagaaaatcat 345
Query: 879 gacaggcaggttcacacatacatggtagagaatgaggcgcaagacacatctgttttggta 938
|||||||||||||||||| ||||||| ||||| || |||||||||||||||||||||||
Sbjct: 344 gacaggcaggttcacacagccatggtacagaataagccgcaagacacatctgttttggta 285
Query: 939 agcagaggtgttgctcttcttctggatcttgtacttggcgaagagtccgaagcgctcgaa 998
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 agcaggggtgttgctcttcttctggatcttgtacttggcgaagagtccgaagcgctcgaa 225
Query: 999 gaggagggaggggaggccggagaggaagaagacggtctcgtggagcaggaaggtgacgac 1058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 gaggagggaggggaggccggagaggaagaagacggtctcgtggagcaggaaggtgacgac 165
Query: 1059 ggtggcgagctggaactcggtgaagttggcgatcaggagctgccacgctgagtcgatggc 1118
|| ||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||
Sbjct: 164 ggcggcgagctggaactcggtgaagttggcgatcaggacctgccacgcggactcgatggc 105
Query: 1119 tgacatgggcgccgccattgtgagagagatagatcgccggcggcgaagatgccgaggagg 1178
|||||||||||||||||| ||| |||||||||||||||||| ||||||||
Sbjct: 104 ggacatgggcgccgccattatga----------tcgccggcggcgaagatg-cgaggagg 56
Query: 1179 ggagaggg-gaggctgagcctggcctg 1204
|||| ||| ||| | ||||||||||||
Sbjct: 55 ggagcgggtgagccagagcctggcctg 29
>gb|BG464244.1|BG464244 EM1_71_D07.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 580
Score = 755 bits (381), Expect = 0.0
Identities = 507/548 (92%), Gaps = 12/548 (2%)
Strand = Plus / Minus
Query: 658 gcatattccgatgttaaaccaaagggtgtggcgtactcatggtggacgctgtgaacgtgt 717
|||||||| || |||||||||||||||||||| ||||| ||||||||||||||||| ||
Sbjct: 580 gcatattcggaagttaaaccaaagggtgtggcatactcgtggtggacgctgtgaacatgc 521
Query: 718 ttgtatagccatttcgtatgcaatgccctgtgcccccaatagaatataaaatcctcaagg 777
|||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 520 ttgtatagccatttcgtatgcagtgccctgtgcccccagtagaatataaaatcctcaagg 461
Query: 778 acaaagtagaaaagaacttgagatacaacaaccgaccaatgtggcaaaggaagagagctc 837
|||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||
Sbjct: 460 acaaagtagaaaagaacttgagatacaacaaccgtccaatgtggtagaggaagagagctc 401
Query: 838 ctgagacccatgaatttgaaggcaggatacgagaaaatcatgacaggcaggttcacacat 897
|| |||||||| ||| |||||||||| || |||||||||||||||||||||||||||||
Sbjct: 400 ctaagacccataaatctgaaggcagggtatgagaaaatcatgacaggcaggttcacacag 341
Query: 898 acatggtagagaatgaggcgcaagacacatctgttttggtaagcagaggtgttgctcttc 957
|||||||| ||||| || |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 340 acatggtacagaataagacgcaagacacatctgttttggtaagcaggggtgttgctcttc 281
Query: 958 ttctggatcttgtacttggcgaagagtccgaagcgctcgaagaggagggaggggaggccg 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ttctggatcttgtacttggcgaagagtccgaagcgctcgaagaggagggaggggaggccg 221
Query: 1018 gagaggaagaagacggtctcgtggagcaggaaggtgacgacggtggcgagctggaactcg 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 gagaggaagaagacggtctcgtggagcaggaaggtgacgacggtggcgagctggaactcg 161
Query: 1078 gtgaagttggcgatcaggagctgccacgctgagtcgatggctgacatgggcgccgccatt 1137
||||||||||||||||||| ||||||||| || |||||||| ||||||||||||||||||
Sbjct: 160 gtgaagttggcgatcaggacctgccacgcggactcgatggcggacatgggcgccgccatt 101
Query: 1138 gtgagagagatagatcgccggcggcgaagatgccgaggaggggagaggg-gaggctgagc 1196
||| |||||||||||||||||| |||||||||||| ||| ||| | ||||
Sbjct: 100 atga----------tcgccggcggcgaagatg-cgaggaggggagcgggtgagccagagc 52
Query: 1197 ctggcctg 1204
||||||||
Sbjct: 51 ctggcctg 44
>gb|BG465559.1|BG465559 RHIZ2_46_A07.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 567
Score = 751 bits (379), Expect = 0.0
Identities = 508/550 (92%), Gaps = 12/550 (2%)
Strand = Plus / Minus
Query: 656 gggcatattccgatgttaaaccaaagggtgtggcgtactcatggtggacgctgtgaacgt 715
|||||||||| || |||||||||||||||||||| ||||| ||||||||||||||||| |
Sbjct: 567 gggcatattcggaagttaaaccaaagggtgtggcatactcgtggtggacgctgtgaacat 508
Query: 716 gtttgtatagccatttcgtatgcaatgccctgtgcccccaatagaatataaaatcctcaa 775
| |||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 507 gcttgtatagccattttgtatgcagtgccctgtgcccccagtagaatataaaatcctcaa 448
Query: 776 ggacaaagtagaaaagaacttgagatacaacaaccgaccaatgtggcaaaggaagagagc 835
|||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||
Sbjct: 447 ggacaaagtagaaaagaacttgagatacaacaaccgtccaatgtggtagaggaagagagc 388
Query: 836 tcctgagacccatgaatttgaaggcaggatacgagaaaatcatgacaggcaggttcacac 895
|||| |||||||| ||| |||||||||| || ||||||||||||||||||||||||||||
Sbjct: 387 tcctaagacccataaatctgaaggcagggtatgagaaaatcatgacaggcaggttcacac 328
Query: 896 atacatggtagagaatgaggcgcaagacacatctgttttggtaagcagaggtgttgctct 955
| |||||||| ||||| || |||||||||||||||||||||||||||| |||||||||||
Sbjct: 327 agacatggtacagaataagacgcaagacacatctgttttggtaagcaggggtgttgctct 268
Query: 956 tcttctggatcttgtacttggcgaagagtccgaagcgctcgaagaggagggaggggaggc 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tcttctggatcttgtacttggcgaagagtccgaagcgctcgaagaggagggaggggaggc 208
Query: 1016 cggagaggaagaagacggtctcgtggagcaggaaggtgacgacggtggcgagctggaact 1075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 cggagaggaagaagacggtctcgtggagcaggaaggtgacgacggtggcgagctggaact 148
Query: 1076 cggtgaagttggcgatcaggagctgccacgctgagtcgatggctgacatgggcgccgcca 1135
||||||||||||||||||||| ||||||||| || |||||||| ||||||||||||||||
Sbjct: 147 cggtgaagttggcgatcaggacctgccacgcggactcgatggcggacatgggcgccgcca 88
Query: 1136 ttgtgagagagatagatcgccggcggcgaagatgccgaggaggggagaggg-gaggctga 1194
|| ||| |||||||||||||||||| |||||||||||| ||| ||| | ||
Sbjct: 87 ttatga----------tcgccggcggcgaagatg-cgaggaggggagcgggtgagccaga 39
Query: 1195 gcctggcctg 1204
||||||||||
Sbjct: 38 gcctggcctg 29
>gb|CB926289.1|CB926289 ABA1_7_G09.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_7_G09_A012 5', mRNA sequence
Length = 590
Score = 731 bits (369), Expect = 0.0
Identities = 459/489 (93%)
Strand = Plus / Minus
Query: 649 gctgggtgggcatattccgatgttaaaccaaagggtgtggcgtactcatggtggacgctg 708
||||||||||||||||| || |||||||||||||||||||| ||||| ||||||||||||
Sbjct: 590 gctgggtgggcatattcggaagttaaaccaaagggtgtggcatactcgtggtggacgctg 531
Query: 709 tgaacgtgtttgtatagccatttcgtatgcaatgccctgtgcccccaatagaatataaaa 768
||||| || |||||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 530 tgaacatgcttgtatagccatttcgtatgcagtgccctgtgcccccagtagaatataaaa 471
Query: 769 tcctcaaggacaaagtagaaaagaacttgagatacaacaaccgaccaatgtggcaaagga 828
||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||
Sbjct: 470 tcctcaaggacaaagtagaaaagaacttgagatacaacaaccgtccaatgtggtagagga 411
Query: 829 agagagctcctgagacccatgaatttgaaggcaggatacgagaaaatcatgacaggcagg 888
||||||||||| |||||||| ||| |||||||||| || |||||||||||||||||||||
Sbjct: 410 agagagctcctaagacccataaatctgaaggcagggtatgagaaaatcatgacaggcagg 351
Query: 889 ttcacacatacatggtagagaatgaggcgcaagacacatctgttttggtaagcagaggtg 948
|||||||| ||||||| ||||| || |||||||||||||||||||||||||||| ||||
Sbjct: 350 ttcacacagtcatggtacagaataagacgcaagacacatctgttttggtaagcaggggtg 291
Query: 949 ttgctcttcttctggatcttgtacttggcgaagagtccgaagcgctcgaagaggagggag 1008
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 290 ttgctcttcttctggatcttgtacttggcgaagagtctgaagcgctcgaagaggagggag 231
Query: 1009 gggaggccggagaggaagaagacggtctcgtggagcaggaaggtgacgacggtggcgagc 1068
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 230 gggaggccggagaggaagaagacggtctcgtggagcaggaaggtgacgtcggtggcgagc 171
Query: 1069 tggaactcggtgaagttggcgatcaggagctgccacgctgagtcgatggctgacatgggc 1128
||||||||||||||||||| |||||||| || |||||| || |||||||| |||||||||
Sbjct: 170 tggaactcggtgaagttggtgatcaggacctaccacgcggactcgatggcggacatgggc 111
Query: 1129 gccgccatt 1137
|||||||||
Sbjct: 110 gccgccatt 102
Score = 50.1 bits (25), Expect = 5e-004
Identities = 32/33 (96%), Gaps = 1/33 (3%)
Strand = Plus / Minus
Query: 1150 gatcgccggcggcgaagatgccgaggaggggag 1182
|||||||||||||||||||| ||||||||||||
Sbjct: 99 gatcgccggcggcgaagatg-cgaggaggggag 68
>gb|CB928855.1|CB928855 ABA1_24_E06.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_24_E06_A012 5', mRNA sequence
Length = 536
Score = 720 bits (363), Expect = 0.0
Identities = 453/483 (93%)
Strand = Plus / Minus
Query: 655 tgggcatattccgatgttaaaccaaagggtgtggcgtactcatggtggacgctgtgaacg 714
||||||||||| || |||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 536 tgggcatattcggaagttaaaccaaagggtgtggcatactcgtggtggacgctgtgaaca 477
Query: 715 tgtttgtatagccatttcgtatgcaatgccctgtgcccccaatagaatataaaatcctca 774
|| | |||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 476 tgctagtatagccatctcgtatgcagtgccctgtgcccccagtagaatataaaatcctca 417
Query: 775 aggacaaagtagaaaagaacttgagatacaacaaccgaccaatgtggcaaaggaagagag 834
||| ||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||
Sbjct: 416 agggcaaagtagaaaagaacttgagatacaacaaccgtccaatgtggtagaggaagagag 357
Query: 835 ctcctgagacccatgaatttgaaggcaggatacgagaaaatcatgacaggcaggttcaca 894
||||| |||||||| ||| |||||||||| || |||||||||||||||||||||||||||
Sbjct: 356 ctcctaagacccataaatctgaaggcagggtatgagaaaatcatgacaggcaggttcaca 297
Query: 895 catacatggtagagaatgaggcgcaagacacatctgttttggtaagcagaggtgttgctc 954
|| |||||||| ||||| || |||||||||||||||||||||||||||| ||||||||||
Sbjct: 296 cagacatggtacagaataagacgcaagacacatctgttttggtaagcaggggtgttgctc 237
Query: 955 ttcttctggatcttgtacttggcgaagagtccgaagcgctcgaagaggagggaggggagg 1014
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 ttcttctggatcttgtacttggcgaagagtccgaagcgctcgaagaggagggaggggagt 177
Query: 1015 ccggagaggaagaagacggtctcgtggagcaggaaggtgacgacggtggcgagctggaac 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 ccggagaggaagaagacggtctcgtggagcaggaaggtgacgacggtggcgagctggaac 117
Query: 1075 tcggtgaagttggcgatcaggagctgccacgctgagtcgatggctgacatgggcgccgcc 1134
|||||||||||||||||||||| ||||||||| || |||||||| |||||||||||| ||
Sbjct: 116 tcggtgaagttggcgatcaggacctgccacgcggactcgatggcggacatgggcgccacc 57
Query: 1135 att 1137
|||
Sbjct: 56 att 54
>gb|CF430669.1|CF430669 NIT1_3_B01.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor cDNA
clone NIT1_3_B01_A002 5', mRNA sequence
Length = 570
Score = 718 bits (362), Expect = 0.0
Identities = 485/525 (92%), Gaps = 12/525 (2%)
Strand = Plus / Minus
Query: 681 gggtgtggcgtactcatggtggacgctgtgaacgtgtttgtatagccatttcgtatgcaa 740
||||||||| ||||| ||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 570 gggtgtggcatactcgtggtggacgctgtgaacatgcttgtatagccatttcgtatgcag 511
Query: 741 tgccctgtgcccccaatagaatataaaatcctcaaggacaaagtagaaaagaacttgaga 800
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 tgccctgtgcccccagtagaatataaaatcctcaaggacaaagtagaaaagaacttgaga 451
Query: 801 tacaacaaccgaccaatgtggcaaaggaagagagctcctgagacccatgaatttgaaggc 860
||||||||||| ||||||||| | ||||||||||||||| |||||||| ||| ||| |||
Sbjct: 450 tacaacaaccgtccaatgtggtagaggaagagagctcctaagacccataaatctgatggc 391
Query: 861 aggatacgagaaaatcatgacaggcaggttcacacatacatggtagagaatgaggcgcaa 920
||| || ||||||||||||||||||||||||||||| |||||||| ||||| || |||||
Sbjct: 390 agggtatgagaaaatcatgacaggcaggttcacacagacatggtacagaataagtcgcaa 331
Query: 921 gacacatctgttttggtaagcagaggtgttgctcttcttctggatcttgtacttggcgaa 980
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 330 gacacatctgttttggtaagcaggggtgttgctcttcttctggatcttgtacttggcgaa 271
Query: 981 gagtccgaagcgctcgaagaggagggaggggaggccggagaggaagaagacggtctcgtg 1040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 gagtccgaagcgctcgaagaggagggaggggaggccggagaggaagaagacggtctcgtg 211
Query: 1041 gagcaggaaggtgacgacggtggcgagctggaactcggtgaagttggcgatcaggagctg 1100
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 210 gagcaggaaggtgacgacggtggcgagctggaactcggtgaagttggcgatcaggacctg 151
Query: 1101 ccacgctgagtcgatggctgacatgggcgccgccattgtgagagagatagatcgccggcg 1160
|||||| || |||||||| |||||||||||||||||| ||| |||||||||
Sbjct: 150 ccacgcggactcgatggcggacatgggcgccgccattatga----------tcgccggcg 101
Query: 1161 gcgaagatgccgaggaggggagaggg-gaggctgagcctggcctg 1204
||||||||| |||||||||||| ||| ||| | ||||||||||||
Sbjct: 100 gcgaagatg-cgaggaggggagcgggtgagccagagcctggcctg 57
>gb|BM323977.1|BM323977 PIC1_29_H04.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 558
Score = 716 bits (361), Expect = 0.0
Identities = 481/520 (92%), Gaps = 12/520 (2%)
Strand = Plus / Minus
Query: 686 tggcgtactcatggtggacgctgtgaacgtgtttgtatagccatttcgtatgcaatgccc 745
|||| ||||| ||||||||||||||||| || |||||||||||||||||||||| |||||
Sbjct: 558 tggcatactcgtggtggacgctgtgaacatgcttgtatagccatttcgtatgcagtgccc 499
Query: 746 tgtgcccccaatagaatataaaatcctcaaggacaaagtagaaaagaacttgagatacaa 805
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tgtgcccccagtagaatataaaatcctcaaggacaaagtagaaaagaacttgagatacaa 439
Query: 806 caaccgaccaatgtggcaaaggaagagagctcctgagacccatgaatttgaaggcaggat 865
|||||| ||||||||| | ||||||||||||||| |||||||| ||| |||||||||| |
Sbjct: 438 caaccgtccaatgtggtagaggaagagagctcctaagacccataaatctgaaggcagggt 379
Query: 866 acgagaaaatcatgacaggcaggttcacacatacatggtagagaatgaggcgcaagacac 925
| ||||||||||||||||||||||||||||| |||||||| ||||| || ||||||||||
Sbjct: 378 atgagaaaatcatgacaggcaggttcacacagacatggtacagaataagacgcaagacac 319
Query: 926 atctgttttggtaagcagaggtgttgctcttcttctggatcttgtacttggcgaagagtc 985
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 atctgttttggtaagcaggggtgttgctcttcttctggatcttgtacttggcgaagagtc 259
Query: 986 cgaagcgctcgaagaggagggaggggaggccggagaggaagaagacggtctcgtggagca 1045
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 cgaagcgctcgaagaggagggaggggaggccggagaggaagaagacggtctcgtggagca 199
Query: 1046 ggaaggtgacgacggtggcgagctggaactcggtgaagttggcgatcaggagctgccacg 1105
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 198 ggaaggtgacgacggtggcgagctggaactcggtgaagttggcgatcaggacctgccacg 139
Query: 1106 ctgagtcgatggctgacatgggcgccgccattgtgagagagatagatcgccggcggcgaa 1165
| || |||||||| |||||||||||||||||| ||| ||||||||||||||
Sbjct: 138 cggactcgatggcggacatgggcgccgccattatga----------tcgccggcggcgaa 89
Query: 1166 gatgccgaggaggggagaggg-gaggctgagcctggcctg 1204
|||| |||||||||||| ||| ||| | ||||||||||||
Sbjct: 88 gatg-cgaggaggggagcgggtgagccagagcctggcctg 50
>gb|BG560341.1|BG560341 RHIZ2_73_C03.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 511
Score = 702 bits (354), Expect = 0.0
Identities = 471/509 (92%), Gaps = 12/509 (2%)
Strand = Plus / Minus
Query: 697 tggtggacgctgtgaacgtgtttgtatagccatttcgtatgcaatgccctgtgcccccaa 756
||||||||||||||||| || |||||||||||||| ||||||| |||||||||||||||
Sbjct: 508 tggtggacgctgtgaacatgcttgtatagccattttgtatgcagtgccctgtgcccccag 449
Query: 757 tagaatataaaatcctcaaggacaaagtagaaaagaacttgagatacaacaaccgaccaa 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 448 tagaatataaaatcctcaaggacaaagtagaaaagaacttgagatacaacaaccgtccaa 389
Query: 817 tgtggcaaaggaagagagctcctgagacccatgaatttgaaggcaggatacgagaaaatc 876
||||| | ||||||||||||||| |||||||| ||| |||||||||| || |||||||||
Sbjct: 388 tgtggtagaggaagagagctcctaagacccataaatctgaaggcagggtatgagaaaatc 329
Query: 877 atgacaggcaggttcacacatacatggtagagaatgaggcgcaagacacatctgttttgg 936
|||||||||||||||||||| |||||||| ||||| || |||||||||||||||||||||
Sbjct: 328 atgacaggcaggttcacacagacatggtacagaataagacgcaagacacatctgttttgg 269
Query: 937 taagcagaggtgttgctcttcttctggatcttgtacttggcgaagagtccgaagcgctcg 996
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 taagcaggggtgttgctcttcttctggatcttgtacttggcgaagagtccgaagcgctcg 209
Query: 997 aagaggagggaggggaggccggagaggaagaagacggtctcgtggagcaggaaggtgacg 1056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 aagaggagggaggggaggccggagaggaagaagacggtctcgtggagcaggaaggtgacg 149
Query: 1057 acggtggcgagctggaactcggtgaagttggcgatcaggagctgccacgctgagtcgatg 1116
|||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||
Sbjct: 148 acggtggcgagctggaactcggtgaagttggcgatcaggacctgccacgcggactcgatg 89
Query: 1117 gctgacatgggcgccgccattgtgagagagatagatcgccggcggcgaagatgccgagga 1176
|| |||||||||||||||||| ||| |||||||||||||||||| ||||||
Sbjct: 88 gcggacatgggcgccgccattatga----------tcgccggcggcgaagatg-cgagga 40
Query: 1177 ggggagaggg-gaggctgagcctggcctg 1204
|||||| ||| ||| | ||||||||||||
Sbjct: 39 ggggagcgggtgagccagagcctggcctg 11
>gb|CN135808.1|CN135808 OX1_39_C06.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_39_C06_A002 3', mRNA sequence
Length = 795
Score = 656 bits (331), Expect = 0.0
Identities = 376/391 (96%)
Strand = Plus / Minus
Query: 312 ctgagcagcttccacaatctacagatttttcccttctttctcctcaatggtctttgcctt 371
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 391 ctgagcagcttccacaatctacagattcttcccttctttctcctcaatggtctttgcctt 332
Query: 372 gcgataatccttgtccgtgccgaacaaccagtccatgtaaacaaatgttgaggcatagtt 431
|||||||||||||||||| || |||||||||||||| ||||||||||| |||||||||||
Sbjct: 331 gcgataatccttgtccgtcccaaacaaccagtccatataaacaaatgtcgaggcatagtt 272
Query: 432 ccctgactttgtgtacagcacacggtgatggtagtcatggaagtccgagccgccatacag 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ccctgactttgtgtacagcacacggtgatggtagtcatggaagtccgagccgccatacag 212
Query: 492 cggcaggaaatttgatgggctccatgggaagtgatagccgctgtgagcttcaactgtctc 551
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 tggcaggaaatttgatgggctccatgggaagtgatagccgctgtgagcttcaactgtctc 152
Query: 552 caaaaccctcaacaccatccacagccacagggtgaagagatgagggccagtaagagcagg 611
||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 151 caatatcctcaacaccatccacagccacagggtgaacagatgagggccagtaagagcagg 92
Query: 612 accaacaactggggcgaatcccaggaacaaaatttcagctgggtgggcatattccgatgt 671
|||||| |||| |||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 91 accaaccactgtggcgaatcccaggaacaaaatttcagctgggtgggcatattcggaagt 32
Query: 672 taaaccaaagggtgtggcgtactcatggtgg 702
|||||||||||||||||| ||||| ||||||
Sbjct: 31 taaaccaaagggtgtggcatactcgtggtgg 1
Score = 202 bits (102), Expect = 6e-050
Identities = 212/246 (86%), Gaps = 7/246 (2%)
Strand = Plus / Minus
Query: 73 ccatatgtatacatcccgtcgagtcacgaaagaaacgcaaagcaaaccaccaggaggaga 132
||||||||||||| ||| ||||| ||||| |||||||||||||| ||| |||||||
Sbjct: 641 ccatatgtatacacccc--cgagt--cgaaacaaacgcaaagcaaaaacccaagaggaga 586
Query: 133 tgacaaatcatcaaattcagttcatgacagaccagggccaccagggcctcattcttgatc 192
| |||||| |||| |||||||||||||||||||| || | ||||| ||||||||||||||
Sbjct: 585 ttacaaattatcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatc 526
Query: 193 atagcaaacacaggaaatcaatatctcaacctatagtatcgatggtcaggagataa---a 249
||||||||||||||||||||| ||||||||||||||||| ||| |||||| |||| |
Sbjct: 525 atagcaaacacaggaaatcaaaatctcaacctatagtatggatcgtcaggcaataactga 466
Query: 250 ctgactgtttctagggtgcatccatatctccttccatgagtgaaactctatcgccagtct 309
|||| |||||||||||||| ||||| ||| ||||||||| |||||||| ||||||||
Sbjct: 465 ctgagtgtttctagggtgcgtccatctctttttccatgagctcaactctattgccagtct 406
Query: 310 tgctga 315
||||||
Sbjct: 405 tgctga 400
>gb|CD227433.1|CD227433 CCC1_51_D09.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_51_D09_A007 3', mRNA sequence
Length = 597
Score = 640 bits (323), Expect = 0.0
Identities = 368/383 (96%)
Strand = Plus / Minus
Query: 312 ctgagcagcttccacaatctacagatttttcccttctttctcctcaatggtctttgcctt 371
||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 383 ctgagcagcttccacaatctacagattcttcccttctttcccctcaatggtctttgcctt 324
Query: 372 gcgataatccttgtccgtgccgaacaaccagtccatgtaaacaaatgttgaggcatagtt 431
|||||||||||||||||| || |||||||||||||| ||||||||||| |||||||||||
Sbjct: 323 gcgataatccttgtccgtcccaaacaaccagtccatataaacaaatgtcgaggcatagtt 264
Query: 432 ccctgactttgtgtacagcacacggtgatggtagtcatggaagtccgagccgccatacag 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ccctgactttgtgtacagcacacggtgatggtagtcatggaagtccgagccgccatacag 204
Query: 492 cggcaggaaatttgatgggctccatgggaagtgatagccgctgtgagcttcaactgtctc 551
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tggcaggaaatttgatgggctccatgggaagtgatagccgctgtgagcttcaactgtctc 144
Query: 552 caaaaccctcaacaccatccacagccacagggtgaagagatgagggccagtaagagcagg 611
||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 143 caatatcctcaacaccatccacagccacagggtgaacagatgagggccagtaagagcagg 84
Query: 612 accaacaactggggcgaatcccaggaacaaaatttcagctgggtgggcatattccgatgt 671
|||||| |||| |||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 83 accaaccactgtggcgaatcccaggaacaaaatttcagctgggtgggcatattcggaagt 24
Query: 672 taaaccaaagggtgtggcgtact 694
|||||||||||||||||| ||||
Sbjct: 23 taaaccaaagggtgtggcatact 1
Score = 196 bits (99), Expect = 4e-048
Identities = 170/193 (88%), Gaps = 3/193 (1%)
Strand = Plus / Minus
Query: 126 gaggagatgacaaatcatcaaattcagttcatgacagaccagggccaccagggcctcatt 185
|||||||| |||||| |||| |||||||||||||||||||| || | ||||| |||||||
Sbjct: 584 gaggagattacaaattatcagattcagttcatgacagaccaaggtcgccaggacctcatt 525
Query: 186 cttgatcatagcaaacacaggaaatcaatatctcaacctatagtatcgatggtcaggaga 245
|||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| |
Sbjct: 524 cttgatcatagcaaacacaggaaatcaaaatctcaacctatagtatggatcgtcaggcaa 465
Query: 246 taa---actgactgtttctagggtgcatccatatctccttccatgagtgaaactctatcg 302
||| ||||| |||||||||||||||||||| ||| ||||||||| |||||||| |
Sbjct: 464 taactgactgagtgtttctagggtgcatccatctctttttccatgagctcaactctattg 405
Query: 303 ccagtcttgctga 315
|||||||||||||
Sbjct: 404 ccagtcttgctga 392
>gb|CN127600.1|CN127600 RHOH1_24_A08.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_24_A08_A002 3', mRNA sequence
Length = 788
Score = 640 bits (323), Expect = 0.0
Identities = 368/383 (96%)
Strand = Plus / Minus
Query: 312 ctgagcagcttccacaatctacagatttttcccttctttctcctcaatggtctttgcctt 371
||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 383 ctgagcagcttccacaatctacagattcttcccttctctctcctcaatggtctttgcctt 324
Query: 372 gcgataatccttgtccgtgccgaacaaccagtccatgtaaacaaatgttgaggcatagtt 431
|||||||||||||||||| || |||||||||||||| ||||||||||| |||||||||||
Sbjct: 323 gcgataatccttgtccgtcccaaacaaccagtccatataaacaaatgtcgaggcatagtt 264
Query: 432 ccctgactttgtgtacagcacacggtgatggtagtcatggaagtccgagccgccatacag 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ccctgactttgtgtacagcacacggtgatggtagtcatggaagtccgagccgccatacag 204
Query: 492 cggcaggaaatttgatgggctccatgggaagtgatagccgctgtgagcttcaactgtctc 551
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tggcaggaaatttgatgggctccatgggaagtgatagccgctgtgagcttcaactgtctc 144
Query: 552 caaaaccctcaacaccatccacagccacagggtgaagagatgagggccagtaagagcagg 611
||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 143 caatatcctcaacaccatccacagccacagggtgaacagatgagggccagtaagagcagg 84
Query: 612 accaacaactggggcgaatcccaggaacaaaatttcagctgggtgggcatattccgatgt 671
|||||| |||| |||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 83 accaaccactgtggcgaatcccaggaacaaaatttcagctgggtgggcatattcggaagt 24
Query: 672 taaaccaaagggtgtggcgtact 694
|||||||||||||||||| ||||
Sbjct: 23 taaaccaaagggtgtggcatact 1
Score = 202 bits (102), Expect = 6e-050
Identities = 212/246 (86%), Gaps = 7/246 (2%)
Strand = Plus / Minus
Query: 73 ccatatgtatacatcccgtcgagtcacgaaagaaacgcaaagcaaaccaccaggaggaga 132
||||||||||||| ||| ||||| ||||| |||||||||||||| ||| |||||||
Sbjct: 633 ccatatgtatacacccc--cgagt--cgaaacaaacgcaaagcaaaaacccaagaggaga 578
Query: 133 tgacaaatcatcaaattcagttcatgacagaccagggccaccagggcctcattcttgatc 192
| |||||| |||| |||||||||||||||||||| || | ||||| ||||||||||||||
Sbjct: 577 ttacaaattatcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatc 518
Query: 193 atagcaaacacaggaaatcaatatctcaacctatagtatcgatggtcaggagataa---a 249
||||||||||||||||||||| ||||||||||||||||| ||| |||||| |||| |
Sbjct: 517 atagcaaacacaggaaatcaaaatctcaacctatagtatggatcgtcaggcaataactga 458
Query: 250 ctgactgtttctagggtgcatccatatctccttccatgagtgaaactctatcgccagtct 309
|||| |||||||||||||| ||||| ||| ||||||||| |||||||| ||||||||
Sbjct: 457 ctgagtgtttctagggtgcgtccatctctttttccatgagctcaactctattgccagtct 398
Query: 310 tgctga 315
||||||
Sbjct: 397 tgctga 392
>gb|CF486159.1|CF486159 POL1_36_C08.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_36_C08_A002 3', mRNA sequence
Length = 688
Score = 632 bits (319), Expect = e-179
Identities = 358/371 (96%)
Strand = Plus / Minus
Query: 312 ctgagcagcttccacaatctacagatttttcccttctttctcctcaatggtctttgcctt 371
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 371 ctgagcagcttccacaatctacagattcttcccttctttctcctcaatggtctttgcctt 312
Query: 372 gcgataatccttgtccgtgccgaacaaccagtccatgtaaacaaatgttgaggcatagtt 431
|||||||||||||||||| || |||||||||||||| ||||||||||| |||||||||||
Sbjct: 311 gcgataatccttgtccgtcccaaacaaccagtccatataaacaaatgtcgaggcatagtt 252
Query: 432 ccctgactttgtgtacagcacacggtgatggtagtcatggaagtccgagccgccatacag 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ccctgactttgtgtacagcacacggtgatggtagtcatggaagtccgagccgccatacag 192
Query: 492 cggcaggaaatttgatgggctccatgggaagtgatagccgctgtgagcttcaactgtctc 551
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tggcaggaaatttgatgggctccatgggaagtgatagccgctgtgagcttcaactgtctc 132
Query: 552 caaaaccctcaacaccatccacagccacagggtgaagagatgagggccagtaagagcagg 611
||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 131 caatatcctcaacaccatccacagccacagggtgaacagatgagggccagtaagagcagg 72
Query: 612 accaacaactggggcgaatcccaggaacaaaatttcagctgggtgggcatattccgatgt 671
|||||| |||| |||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 71 accaaccactgtggcgaatcccaggaacaaaatttcagctgggtgggcatattcggaagt 12
Query: 672 taaaccaaagg 682
|||||||||||
Sbjct: 11 taaaccaaagg 1
Score = 202 bits (102), Expect = 6e-050
Identities = 212/246 (86%), Gaps = 7/246 (2%)
Strand = Plus / Minus
Query: 73 ccatatgtatacatcccgtcgagtcacgaaagaaacgcaaagcaaaccaccaggaggaga 132
||||||||||||| ||| ||||| ||||| |||||||||||||| ||| |||||||
Sbjct: 621 ccatatgtatacacccc--cgagt--cgaaacaaacgcaaagcaaaaacccaagaggaga 566
Query: 133 tgacaaatcatcaaattcagttcatgacagaccagggccaccagggcctcattcttgatc 192
| |||||| |||| |||||||||||||||||||| || | ||||| ||||||||||||||
Sbjct: 565 ttacaaattatcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatc 506
Query: 193 atagcaaacacaggaaatcaatatctcaacctatagtatcgatggtcaggagataa---a 249
||||||||||||||||||||| ||||||||||||||||| ||| |||||| |||| |
Sbjct: 505 atagcaaacacaggaaatcaaaatctcaacctatagtatggatcgtcaggcaataactga 446
Query: 250 ctgactgtttctagggtgcatccatatctccttccatgagtgaaactctatcgccagtct 309
|||| |||||||||||||| ||||| ||| ||||||||| |||||||| ||||||||
Sbjct: 445 ctgagtgtttctagggtgcgtccatctctttttccatgagctcaactctattgccagtct 386
Query: 310 tgctga 315
||||||
Sbjct: 385 tgctga 380
>gb|BE594228.1|BE594228 WS1_103_H04.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 424
Score = 626 bits (316), Expect = e-177
Identities = 391/416 (93%)
Strand = Plus / Minus
Query: 568 atccacagccacagggtgaagagatgagggccagtaagagcaggaccaacaactggggcg 627
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||| | ||
Sbjct: 424 atccacagccacagggtgaacagatgagggccagtaagagcaggaccaaccactgtgccg 365
Query: 628 aatcccaggaacaaaatttcagctgggtgggcatattccgatgttaaaccaaagggtgtg 687
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 364 aatcccaggaacaaaatttcagctgggtgggcatattcggaagttaaaccaaagggtgtg 305
Query: 688 gcgtactcatggtggacgctgtgaacgtgtttgtatagccatttcgtatgcaatgccctg 747
|| ||||| ||||||||||||||||| || |||||||||||||||||||||| |||||||
Sbjct: 304 gcatactcgtggtggacgctgtgaacatgcttgtatagccatttcgtatgcagtgccctg 245
Query: 748 tgcccccaatagaatataaaatcctcaaggacaaagtagaaaagaacttgagatacaaca 807
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tgcccccagtagaatataaaatcctcaaggacaaagtagaaaagaacttgagatacaaca 185
Query: 808 accgaccaatgtggcaaaggaagagagctcctgagacccatgaatttgaaggcaggatac 867
|||| ||||||||| | ||||||||||||||| |||||||| ||| |||||||||| ||
Sbjct: 184 accgtccaatgtggtagaggaagagagctcctaagacccataaatctgaaggcagggtat 125
Query: 868 gagaaaatcatgacaggcaggttcacacatacatggtagagaatgaggcgcaagacacat 927
||||||||||||||||||||||||||||| |||||||| ||||| || ||||||||||||
Sbjct: 124 gagaaaatcatgacaggcaggttcacacagacatggtacagaataagacgcaagacacat 65
Query: 928 ctgttttggtaagcagaggtgttgctcttcttctggatcttgtacttggcgaagag 983
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 64 ctgttttggtaagcaggggtgttgctcttcttctggatcttgtacttggcgaagag 9
>gb|BG159656.1|BG159656 OV2_7_D09.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 431
Score = 618 bits (312), Expect = e-175
Identities = 397/424 (93%), Gaps = 1/424 (0%)
Strand = Plus / Minus
Query: 674 aaccaaagggtgtggcgtactcatggtggacgctgtgaacgtgtttgtatagccatttcg 733
|||||||||||||||| ||||| ||||||||||||||||| || ||||||||||||||||
Sbjct: 431 aaccaaagggtgtggcatactcgtggtggacgctgtgaacatgcttgtatagccatttcg 372
Query: 734 tatgcaatgccctgtgcccccaatagaatataaaatcctcaaggacaaagtagaaaagaa 793
|||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 371 tatgcagtgccctgtgcccccagtagaatataaaatcctcaaggacaaagtagaaaagaa 312
Query: 794 cttgagatacaacaaccgaccaatgtggcaaaggaagagagctcctgagacccatgaatt 853
||||||||||| || ||| ||||||||| | ||||||||||||||| |||||||| |||
Sbjct: 311 cttgagatacatcacccgtccaatgtggtagaggaagagagctcctaagacccataaatc 252
Query: 854 tgaaggcaggatacgagaaaatcatgacaggcaggttcacacatacatggtagagaatga 913
|||||||||| || ||||||||||||||||||||||||||||| |||||||| ||||| |
Sbjct: 251 tgaaggcagggtatgagaaaatcatgacaggcaggttcacacagacatggtacagaataa 192
Query: 914 ggcgcaagacacatctgttttggtaagcagaggtgttgctcttcttctggatcttgtact 973
| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 191 gacgcaagacacatctgttttggtaagcaggggtgttgctcttcttctggatcttgtact 132
Query: 974 tggcgaagagtccgaagcgctcgaagaggagggaggggaggccggagaggaagaagacgg 1033
||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 131 tggcgaagagtccaaagcgctcgaacaggagggaggggaggccgtagaggaagaagacgg 72
Query: 1034 tctcgtggagcaggaaggtgacgacggtggcgagctggaactcg-gtgaagttggcgatc 1092
||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 71 tctagtggagcaggaaggtgacgacggtggcgagttggaactcgagtgaagttggcgatc 12
Query: 1093 agga 1096
||||
Sbjct: 11 agga 8
>gb|CN127125.1|CN127125 RHOH1_21_E05.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_21_E05_A002 3', mRNA sequence
Length = 779
Score = 611 bits (308), Expect = e-173
Identities = 341/352 (96%)
Strand = Plus / Minus
Query: 312 ctgagcagcttccacaatctacagatttttcccttctttctcctcaatggtctttgcctt 371
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 352 ctgagcagcttccacaatctacagattcttcccttctttctcctcaatggtctttgcctt 293
Query: 372 gcgataatccttgtccgtgccgaacaaccagtccatgtaaacaaatgttgaggcatagtt 431
|||||||||||||||||| || |||||||||||||| ||||||||||| |||||||||||
Sbjct: 292 gcgataatccttgtccgtcccaaacaaccagtccatataaacaaatgtcgaggcatagtt 233
Query: 432 ccctgactttgtgtacagcacacggtgatggtagtcatggaagtccgagccgccatacag 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 ccctgactttgtgtacagcacacggtgatggtagtcatggaagtccgagccgccatacag 173
Query: 492 cggcaggaaatttgatgggctccatgggaagtgatagccgctgtgagcttcaactgtctc 551
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 tggcaggaaatttgatgggctccatgggaagtgatagccgctgtgagcttcaactgtctc 113
Query: 552 caaaaccctcaacaccatccacagccacagggtgaagagatgagggccagtaagagcagg 611
||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 112 caatatcctcaacaccatccacagccacagggtgaacagatgagggccagtaagagcagg 53
Query: 612 accaacaactggggcgaatcccaggaacaaaatttcagctgggtgggcatat 663
|||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 accaaccactgtggcgaatcccaggaacaaaatttcagctgggtgggcatat 1
Score = 202 bits (102), Expect = 6e-050
Identities = 212/246 (86%), Gaps = 7/246 (2%)
Strand = Plus / Minus
Query: 73 ccatatgtatacatcccgtcgagtcacgaaagaaacgcaaagcaaaccaccaggaggaga 132
||||||||||||| ||| ||||| ||||| |||||||||||||| ||| |||||||
Sbjct: 602 ccatatgtatacacccc--cgagt--cgaaacaaacgcaaagcaaaaacccaagaggaga 547
Query: 133 tgacaaatcatcaaattcagttcatgacagaccagggccaccagggcctcattcttgatc 192
| |||||| |||| |||||||||||||||||||| || | ||||| ||||||||||||||
Sbjct: 546 ttacaaattatcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatc 487
Query: 193 atagcaaacacaggaaatcaatatctcaacctatagtatcgatggtcaggagataa---a 249
||||||||||||||||||||| ||||||||||||||||| ||| |||||| |||| |
Sbjct: 486 atagcaaacacaggaaatcaaaatctcaacctatagtatggatcgtcaggcaataactga 427
Query: 250 ctgactgtttctagggtgcatccatatctccttccatgagtgaaactctatcgccagtct 309
|||| |||||||||||||| ||||| ||| ||||||||| |||||||| ||||||||
Sbjct: 426 ctgagtgtttctagggtgcgtccatctctttttccatgagctcaactctattgccagtct 367
Query: 310 tgctga 315
||||||
Sbjct: 366 tgctga 361
>gb|CX609713.1|CX609713 ANR1_14_G03.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_14_G03_A002 3', mRNA sequence
Length = 776
Score = 605 bits (305), Expect = e-171
Identities = 338/349 (96%)
Strand = Plus / Minus
Query: 312 ctgagcagcttccacaatctacagatttttcccttctttctcctcaatggtctttgcctt 371
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 349 ctgagcagcttccacaatctacagattcttcccttctttctcctcaatggtctttgcctt 290
Query: 372 gcgataatccttgtccgtgccgaacaaccagtccatgtaaacaaatgttgaggcatagtt 431
|||||||||||||||||| || |||||||||||||| ||||||||||| |||||||||||
Sbjct: 289 gcgataatccttgtccgtcccaaacaaccagtccatataaacaaatgtcgaggcatagtt 230
Query: 432 ccctgactttgtgtacagcacacggtgatggtagtcatggaagtccgagccgccatacag 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 ccctgactttgtgtacagcacacggtgatggtagtcatggaagtccgagccgccatacag 170
Query: 492 cggcaggaaatttgatgggctccatgggaagtgatagccgctgtgagcttcaactgtctc 551
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 tggcaggaaatttgatgggctccatgggaagtgatagccgctgtgagcttcaactgtctc 110
Query: 552 caaaaccctcaacaccatccacagccacagggtgaagagatgagggccagtaagagcagg 611
||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 109 caatatcctcaacaccatccacagccacagggtgaacagatgagggccagtaagagcagg 50
Query: 612 accaacaactggggcgaatcccaggaacaaaatttcagctgggtgggca 660
|||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 49 accaaccactgtggcgaatcccaggaacaaaatttcagctgggtgggca 1
Score = 202 bits (102), Expect = 6e-050
Identities = 212/246 (86%), Gaps = 7/246 (2%)
Strand = Plus / Minus
Query: 73 ccatatgtatacatcccgtcgagtcacgaaagaaacgcaaagcaaaccaccaggaggaga 132
||||||||||||| ||| ||||| ||||| |||||||||||||| ||| |||||||
Sbjct: 599 ccatatgtatacacccc--cgagt--cgaaacaaacgcaaagcaaaaacccaagaggaga 544
Query: 133 tgacaaatcatcaaattcagttcatgacagaccagggccaccagggcctcattcttgatc 192
| |||||| |||| |||||||||||||||||||| || | ||||| ||||||||||||||
Sbjct: 543 ttacaaattatcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatc 484
Query: 193 atagcaaacacaggaaatcaatatctcaacctatagtatcgatggtcaggagataa---a 249
||||||||||||||||||||| ||||||||||||||||| ||| |||||| |||| |
Sbjct: 483 atagcaaacacaggaaatcaaaatctcaacctatagtatggatcgtcaggcaataactga 424
Query: 250 ctgactgtttctagggtgcatccatatctccttccatgagtgaaactctatcgccagtct 309
|||| |||||||||||||| ||||| ||| ||||||||| |||||||| ||||||||
Sbjct: 423 ctgagtgtttctagggtgcgtccatctctttttccatgagctcaactctattgccagtct 364
Query: 310 tgctga 315
||||||
Sbjct: 363 tgctga 358
>gb|BG739654.1|BG739654 EM1_73_E02.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 372
Score = 587 bits (296), Expect = e-165
Identities = 347/364 (95%)
Strand = Plus / Minus
Query: 697 tggtggacgctgtgaacgtgtttgtatagccatttcgtatgcaatgccctgtgcccccaa 756
||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||
Sbjct: 372 tggtggacgctgtgaacatgcttgtatagccatttcgtatgcagtgccctgtgcccccag 313
Query: 757 tagaatataaaatcctcaaggacaaagtagaaaagaacttgagatacaacaaccgaccaa 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 312 tagaatataaaatcctcaaggacaaagtagaaaagaacttgagatacaacaaccgtccaa 253
Query: 817 tgtggcaaaggaagagagctcctgagacccatgaatttgaaggcaggatacgagaaaatc 876
||||| | ||||||||||||||| |||||||| ||| |||||||||| || |||||||||
Sbjct: 252 tgtggtagaggaagagagctcctaagacccataaatctgaaggcagggtatgagaaaatc 193
Query: 877 atgacaggcaggttcacacatacatggtagagaatgaggcgcaagacacatctgttttgg 936
|||||||||||||||||||| |||||||| ||||| || |||||||||||||||||||||
Sbjct: 192 atgacaggcaggttcacacagacatggtacagaataagacgcaagacacatctgttttgg 133
Query: 937 taagcagaggtgttgctcttcttctggatcttgtacttggcgaagagtccgaagcgctcg 996
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 taagcaggggtgttgctcttcttctggatcttgtacttggcgaagagtccgaagcgctcg 73
Query: 997 aagaggagggaggggaggccggagaggaagaagacggtctcgtggagcaggaaggtgacg 1056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 aagaggagggaggggaggccggagaggaagaagacggtctcgtggagcaggaaggtgacg 13
Query: 1057 acgg 1060
||||
Sbjct: 12 acgg 9
>gb|BG488174.1|BG488174 RHIZ2_60_D11.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 420
Score = 523 bits (264), Expect = e-146
Identities = 369/403 (91%), Gaps = 12/403 (2%)
Strand = Plus / Minus
Query: 803 caacaaccgaccaatgtggcaaaggaagagagctcctgagacccatgaatttgaaggcag 862
||||| ||| ||||||||| | ||||||||||||||| |||||||| ||| |||||||||
Sbjct: 420 caacagccgtccaatgtggtagaggaagagagctcctaagacccataaatctgaaggcag 361
Query: 863 gatacgagaaaatcatgacaggcaggttcacacatacatggtagagaatgaggcgcaaga 922
| || ||||||||||||||||||||||||||||| |||||||| ||||| || |||||||
Sbjct: 360 ggtatgagaaaatcatgacaggcaggttcacacagacatggtacagaataagacgcaaga 301
Query: 923 cacatctgttttggtaagcagaggtgttgctcttcttctggatcttgtacttggcgaaga 982
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 300 cacatctgttttggtaagcaggggtgttgctcttcttctggatcttgtacttggcgaaga 241
Query: 983 gtccgaagcgctcgaagaggagggaggggaggccggagaggaagaagacggtctcgtgga 1042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gtccgaagcgctcgaagaggagggaggggaggccggagaggaagaagacggtctcgtgga 181
Query: 1043 gcaggaaggtgacgacggtggcgagctggaactcggtgaagttggcgatcaggagctgcc 1102
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 180 gcaggaaggtgacgacggtggcgagctggaactcggtgaagttggcgatcaggacctgcc 121
Query: 1103 acgctgagtcgatggctgacatgggcgccgccattgtgagagagatagatcgccggcggc 1162
|||| || |||||||| |||||||||||||||||| ||| |||||||||||
Sbjct: 120 acgcggactcgatggcggacatgggcgccgccattatga----------tcgccggcggc 71
Query: 1163 gaagatgccgaggaggggagaggg-gaggctgagcctggcctg 1204
||||||| |||||||||||| ||| ||| | ||||||||||||
Sbjct: 70 gaagatg-cgaggaggggagcgggtgagccagagcctggcctg 29
>gb|BG560577.1|BG560577 RHIZ2_59_B06.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 410
Score = 519 bits (262), Expect = e-145
Identities = 361/393 (91%), Gaps = 12/393 (3%)
Strand = Plus / Minus
Query: 813 ccaatgtggcaaaggaagagagctcctgagacccatgaatttgaaggcaggatacgagaa 872
||||||||| | ||||||||||||||| |||||||| ||| |||||||||| || |||||
Sbjct: 410 ccaatgtggtagaggaagagagctcctaagacccataaatctgaaggcagggtatgagaa 351
Query: 873 aatcatgacaggcaggttcacacatacatggtagagaatgaggcgcaagacacatctgtt 932
|||||||||||||||||||||||| |||||||| ||||| || |||||||||||||||||
Sbjct: 350 aatcatgacaggcaggttcacacagacatggtacagaataagacgcaagacacatctgtt 291
Query: 933 ttggtaagcagaggtgttgctcttcttctggatcttgtacttggcgaagagtccgaagcg 992
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ttggtaagcaggggtgttgctcttcttctggatcttgtacttggcgaagagtccgaagcg 231
Query: 993 ctcgaagaggagggaggggaggccggagaggaagaagacggtctcgtggagcaggaaggt 1052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 ctcgaagaggagggaggggaggccggagaggaagaagacggtctcgtggagcaggaaggt 171
Query: 1053 gacgacggtggcgagctggaactcggtgaagttggcgatcaggagctgccacgctgagtc 1112
|||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||
Sbjct: 170 gacgacggtggcgagctggaactcggtgaagttggcgatcaggacctgccacgcggactc 111
Query: 1113 gatggctgacatgggcgccgccattgtgagagagatagatcgccggcggcgaagatgccg 1172
|||||| |||||||||||||||||| ||| |||||||||||||||||| ||
Sbjct: 110 gatggcggacatgggcgccgccattatga----------tcgccggcggcgaagatg-cg 62
Query: 1173 aggaggggagaggg-gaggctgagcctggcctg 1204
|||||||||| ||| ||| | ||||||||||||
Sbjct: 61 aggaggggagcgggtgagccagagcctggcctg 29
>gb|BE593911.1|BE593911 WS1_103_H04.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 637
Score = 507 bits (256), Expect = e-142
Identities = 283/292 (96%)
Strand = Plus / Minus
Query: 312 ctgagcagcttccacaatctacagatttttcccttctttctcctcaatggtctttgcctt 371
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 292 ctgagcagcttccacaatctacagattcttcccttctttctcctcaatggtctttgcctt 233
Query: 372 gcgataatccttgtccgtgccgaacaaccagtccatgtaaacaaatgttgaggcatagtt 431
|||||||||||||||||| || |||||||||||||| ||||||||||| |||||||||||
Sbjct: 232 gcgataatccttgtccgtcccaaacaaccagtccatataaacaaatgtcgaggcatagtt 173
Query: 432 ccctgactttgtgtacagcacacggtgatggtagtcatggaagtccgagccgccatacag 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 ccctgactttgtgtacagcacacggtgatggtagtcatggaagtccgagccgccatacag 113
Query: 492 cggcaggaaatttgatgggctccatgggaagtgatagccgctgtgagcttcaactgtctc 551
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 tggcaggaaatttgatgggctccatgggaagtgatagccgctgtgagcttcaactgtctc 53
Query: 552 caaaaccctcaacaccatccacagccacagggtgaagagatgagggccagta 603
||| | |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 52 caatatcctcaacaccatccacagccacagggtgaacagatgagggccagta 1
Score = 202 bits (102), Expect = 6e-050
Identities = 212/246 (86%), Gaps = 7/246 (2%)
Strand = Plus / Minus
Query: 73 ccatatgtatacatcccgtcgagtcacgaaagaaacgcaaagcaaaccaccaggaggaga 132
||||||||||||| ||| ||||| ||||| |||||||||||||| ||| |||||||
Sbjct: 542 ccatatgtatacacccc--cgagt--cgaaacaaacgcaaagcaaaaacccaagaggaga 487
Query: 133 tgacaaatcatcaaattcagttcatgacagaccagggccaccagggcctcattcttgatc 192
| |||||| |||| |||||||||||||||||||| || | ||||| ||||||||||||||
Sbjct: 486 ttacaaattatcagattcagttcatgacagaccaaggtcgccaggacctcattcttgatc 427
Query: 193 atagcaaacacaggaaatcaatatctcaacctatagtatcgatggtcaggagataa---a 249
||||||||||||||||||||| ||||||||||||||||| ||| |||||| |||| |
Sbjct: 426 atagcaaacacaggaaatcaaaatctcaacctatagtatggatcgtcaggcaataactga 367
Query: 250 ctgactgtttctagggtgcatccatatctccttccatgagtgaaactctatcgccagtct 309
|||| |||||||||||||| ||||| ||| ||||||||| |||||||| ||||||||
Sbjct: 366 ctgagtgtttctagggtgcgtccatctctttttccatgagctcaactctattgccagtct 307
Query: 310 tgctga 315
||||||
Sbjct: 306 tgctga 301
>gb|BM328492.1|BM328492 PIC1_29_H04.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 504
Score = 502 bits (253), Expect = e-140
Identities = 280/289 (96%)
Strand = Plus / Minus
Query: 312 ctgagcagcttccacaatctacagatttttcccttctttctcctcaatggtctttgcctt 371
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 289 ctgagcagcttccacaatctacagattcttcccttctttctcctcaatggtctttgcctt 230
Query: 372 gcgataatccttgtccgtgccgaacaaccagtccatgtaaacaaatgttgaggcatagtt 431
|||||||||||||||||| || |||||||||||||| ||||||||||| |||||||||||
Sbjct: 229 gcgataatccttgtccgtcccaaacaaccagtccatataaacaaatgtcgaggcatagtt 170
Query: 432 ccctgactttgtgtacagcacacggtgatggtagtcatggaagtccgagccgccatacag 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 ccctgactttgtgtacagcacacggtgatggtagtcatggaagtccgagccgccatacag 110
Query: 492 cggcaggaaatttgatgggctccatgggaagtgatagccgctgtgagcttcaactgtctc 551
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 tggcaggaaatttgatgggctccatgggaagtgatagccgctgtgagcttcaactgtctc 50
Query: 552 caaaaccctcaacaccatccacagccacagggtgaagagatgagggcca 600
||| | |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 49 caatatcctcaacaccatccacagccacagggtgaacagatgagggcca 1
Score = 188 bits (95), Expect = 9e-046
Identities = 169/193 (87%), Gaps = 3/193 (1%)
Strand = Plus / Minus
Query: 126 gaggagatgacaaatcatcaaattcagttcatgacagaccagggccaccagggcctcatt 185
|||||||| |||||| |||| |||||||||||||||||||| || | ||||| |||||||
Sbjct: 490 gaggagattacaaattatcagattcagttcatgacagaccaaggtcgccaggacctcatt 431
Query: 186 cttgatcatagcaaacacaggaaatcaatatctcaacctatagtatcgatggtcaggaga 245
|||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| |
Sbjct: 430 cttgatcatagcaaacacaggaaatcaaaatctcaacctatagtatggatcgtcaggcaa 371
Query: 246 taa---actgactgtttctagggtgcatccatatctccttccatgagtgaaactctatcg 302
||| ||||| |||||||||||||| ||||| ||| ||||||||| |||||||| |
Sbjct: 370 taactgactgagtgtttctagggtgcgtccatctctttttccatgagctcaactctattg 311
Query: 303 ccagtcttgctga 315
|||||||||||||
Sbjct: 310 ccagtcttgctga 298
>gb|BG465157.1|BG465157 EM1_34_B03.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 338
Score = 488 bits (246), Expect = e-136
Identities = 310/331 (93%), Gaps = 1/331 (0%)
Strand = Plus / Minus
Query: 730 ttcgtatgcaatgccctgtgcccccaatagaatataaaatcctcaaggacaaagtagaaa 789
|||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 338 ttcgtatgcagtgccctgtgcccccagtagaatataaaatcctcaaggacaaagtagaaa 279
Query: 790 agaacttgagatacaacaaccgaccaatgtggcaaaggaagagagctcctgagacccatg 849
|||||||||||||||||||||| ||||||||| | ||||||||||||||| ||||||||
Sbjct: 278 agaacttgagatacaacaaccgtccaatgtgg-agaggaagagagctcctaagacccata 220
Query: 850 aatttgaaggcaggatacgagaaaatcatgacaggcaggttcacacatacatggtagaga 909
||| |||||||||| || ||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 219 aatctgaaggcagggtangagaaaatcatgacaggcaggttcacacagacatggtacaga 160
Query: 910 atgaggcgcaagacacatctgttttggtaagcagaggtgttgctcttcttctggatcttg 969
|| || ||||||||||||||||||||| | ||| |||||||||||||||||||||||||
Sbjct: 159 ataagacgcaagacacatctgttttggaagccaggggtgttgctcttcttctggatcttg 100
Query: 970 tacttggcgaagagtccgaagcgctcgaagaggagggaggggaggccggagaggaagaag 1029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 tacttggcgaagagtccgaagcgctcgaagaggagggaggggaggccggagaggaagaag 40
Query: 1030 acggtctcgtggagcaggaaggtgacgacgg 1060
||||||||||| ||||||||||| ||||||
Sbjct: 39 acggtctcgtgangcaggaaggtgncgacgg 9
>gb|BG559753.1|BG559753 RHIZ2_73_C03.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 485
Score = 476 bits (240), Expect = e-132
Identities = 261/268 (97%)
Strand = Plus / Minus
Query: 312 ctgagcagcttccacaatctacagatttttcccttctttctcctcaatggtctttgcctt 371
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 268 ctgagcagcttccacaatctacagattcttcccttctttctcctcaatggtctttgcctt 209
Query: 372 gcgataatccttgtccgtgccgaacaaccagtccatgtaaacaaatgttgaggcatagtt 431
|||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 208 gcgataatccttgtccgtcccgaacaaccagtccatataaacaaatgtcgaggcatagtt 149
Query: 432 ccctgactttgtgtacagcacacggtgatggtagtcatggaagtccgagccgccatacag 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 ccctgactttgtgtacagcacacggtgatggtagtcatggaagtccgagccgccatacag 89
Query: 492 cggcaggaaatttgatgggctccatgggaagtgatagccgctgtgagcttcaactgtctc 551
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 tggcaggaaatttgatgggctccatgggaagtgatagccgctgtgagcttcaactgtctc 29
Query: 552 caaaaccctcaacaccatccacagccac 579
||| | ||||||||||||||||||||||
Sbjct: 28 caatatcctcaacaccatccacagccac 1
Score = 204 bits (103), Expect = 1e-050
Identities = 171/193 (88%), Gaps = 3/193 (1%)
Strand = Plus / Minus
Query: 126 gaggagatgacaaatcatcaaattcagttcatgacagaccagggccaccagggcctcatt 185
|||||||| |||||| |||| |||||||||||||||||||| || | ||||| |||||||
Sbjct: 469 gaggagattacaaattatcagattcagttcatgacagaccaaggtcgccaggacctcatt 410
Query: 186 cttgatcatagcaaacacaggaaatcaatatctcaacctatagtatcgatggtcaggaga 245
|||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |
Sbjct: 409 cttgatcatagcaaacacaggaaatcaaaatctcaacctatagtatcgatcgtcaggcaa 350
Query: 246 taa---actgactgtttctagggtgcatccatatctccttccatgagtgaaactctatcg 302
||| ||||| |||||||||||||||||||| ||| ||||||||| |||||||| |
Sbjct: 349 taactgactgagtgtttctagggtgcatccatctctttttccatgagctcaactctattg 290
Query: 303 ccagtcttgctga 315
|||||||||||||
Sbjct: 289 ccagtcttgctga 277
>gb|CB926381.1|CB926381 ABA1_8_D03.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_8_D03_A012 5', mRNA sequence
Length = 383
Score = 466 bits (235), Expect = e-129
Identities = 313/338 (92%), Gaps = 12/338 (3%)
Strand = Plus / Minus
Query: 868 gagaaaatcatgacaggcaggttcacacatacatggtagagaatgaggcgcaagacacat 927
||||||||||||||||||||||||||||| |||||||| ||||| || ||||||||||||
Sbjct: 378 gagaaaatcatgacaggcaggttcacacagacatggtacagaataagacgcaagacacat 319
Query: 928 ctgttttggtaagcagaggtgttgctcttcttctggatcttgtacttggcgaagagtccg 987
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ctgttttggtaagcaggggtgttgctcttcttctggatcttgtacttggcgaagagtccg 259
Query: 988 aagcgctcgaagaggagggaggggaggccggagaggaagaagacggtctcgtggagcagg 1047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 aagcgctcgaagaggagggaggggaggccggagaggaagaagacggtctcgtggagcagg 199
Query: 1048 aaggtgacgacggtggcgagctggaactcggtgaagttggcgatcaggagctgccacgct 1107
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 198 aaggtgacgacggtggcgagctggaactcggtgaagttggcgatcaggacctgccacgcg 139
Query: 1108 gagtcgatggctgacatgggcgccgccattgtgagagagatagatcgccggcggcgaaga 1167
|| |||||||| |||||||||||||||||| ||| ||||||||||||||||
Sbjct: 138 gactcgatggcggacatgggcgccgccattatga----------tcgccggcggcgaaga 89
Query: 1168 tgccgaggaggggagaggg-gaggctgagcctggcctg 1204
|| |||||||||||| ||| ||| | ||||||||||||
Sbjct: 88 tg-cgaggaggggagcgggtgagccagagcctggcctg 52
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 383,419
Number of Sequences: 832831
Number of extensions: 383419
Number of successful extensions: 107915
Number of sequences better than 0.5: 92
Number of HSP's better than 0.5 without gapping: 92
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107551
Number of HSP's gapped (non-prelim): 254
length of query: 1312
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1292
effective length of database: 474,703,049
effective search space: 613316339308
effective search space used: 613316339308
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)