BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2441373.2.3
(986 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD210976.1|CD210976 HS1_58_D11.b1_A012 Heat-shocked seed... 904 0.0
gb|BE596652.1|BE596652 PI1_58_H11.g1_A002 Pathogen induced ... 856 0.0
gb|CD432246.1|CD432246 ETH1_26_B08.g1_A002 Ethylene-treated... 837 0.0
gb|BQ656051.1|BQ656051 pRC0367 Sorghum halepense rhizome cD... 787 0.0
gb|BG241357.1|BG241357 RHIZ2_51_A07.g1_A003 Rhizome2 (RHIZ2... 779 0.0
gb|BG101932.1|BG101932 RHIZ2_21_F05.g1_A003 Rhizome2 (RHIZ2... 775 0.0
gb|AW746037.1|AW746037 WS1_39_A10.b1_A002 Water-stressed 1 ... 773 0.0
gb|BE596728.1|BE596728 PI1_58_H11.b1_A002 Pathogen induced ... 773 0.0
gb|BE594331.1|BE594331 PI1_32_A10.b2_A002 Pathogen induced ... 769 0.0
gb|BE596545.1|BE596545 PI1_57_E07.b1_A002 Pathogen induced ... 759 0.0
gb|BQ655990.1|BQ655990 pRC0217 Sorghum halepense rhizome cD... 751 0.0
gb|BG560582.1|BG560582 RHIZ2_59_B11.b1_A003 Rhizome2 (RHIZ2... 749 0.0
gb|BG102165.1|BG102165 RHIZ2_21_F05.b1_A003 Rhizome2 (RHIZ2... 726 0.0
gb|BE596467.1|BE596467 PI1_57_E07.g1_A002 Pathogen induced ... 716 0.0
gb|BM324164.1|BM324164 PIC1_25_C07.b1_A002 Pathogen-infecte... 714 0.0
gb|BG465644.1|BG465644 RHIZ2_47_A04.b1_A003 Rhizome2 (RHIZ2... 712 0.0
gb|BF588431.1|BF588431 FM1_36_E10.g1_A003 Floral-Induced Me... 710 0.0
gb|BE596353.1|BE596353 PI1_49_G10.b1_A002 Pathogen induced ... 702 0.0
gb|BG273454.1|BG273454 OV2_25_H09.b1_A002 Ovary 2 (OV2) Sor... 702 0.0
gb|BE366319.1|BE366319 PI1_32_A10.b1_A002 Pathogen induced ... 700 0.0
gb|BG241809.1|BG241809 RHIZ2_51_A07.b1_A003 Rhizome2 (RHIZ2... 686 0.0
gb|BG273320.1|BG273320 OV2_25_H09.g1_A002 Ovary 2 (OV2) Sor... 676 0.0
gb|BE595909.1|BE595909 PI1_49_G10.g1_A002 Pathogen induced ... 670 0.0
gb|BZ337970.1|BZ337970 ia92b08.b1 WGS-SbicolorF (JM107 adap... 660 0.0
gb|BE366332.1|BE366332 PI1_32_A10.g1_A002 Pathogen induced ... 656 0.0
gb|BM328681.1|BM328681 PIC1_25_C07.g1_A002 Pathogen-infecte... 624 e-177
gb|CW247926.1|CW247926 104_709_11222021_148_35025_029 Sorgh... 605 e-171
gb|BE357649.1|BE357649 DG1_21_C12.g1_A002 Dark Grown 1 (DG1... 585 e-165
gb|BF586565.1|BF586565 FM1_29_G11.g1_A003 Floral-Induced Me... 565 e-159
gb|BF586645.1|BF586645 FM1_29_G11.b1_A003 Floral-Induced Me... 565 e-159
gb|BM325507.1|BM325507 PIC1_45_D08.b1_A002 Pathogen-infecte... 565 e-159
gb|CN125410.1|CN125410 RHOH1_10_H09.g1_A002 Acid- and alkal... 565 e-159
gb|AW565189.1|AW565189 LG1_328_B09.b1_A002 Light Grown 1 (L... 559 e-157
gb|CF482521.1|CF482521 POL1_7_A12.g1_A002 Pollen Sorghum bi... 557 e-157
gb|AW284040.1|AW284040 LG1_267_A09.g1_A002 Light Grown 1 (L... 529 e-148
gb|AW284041.1|AW284041 LG1_267_A10.g1_A002 Light Grown 1 (L... 529 e-148
gb|AW676975.1|AW676975 DG1_3_G12.b1_A002 Dark Grown 1 (DG1)... 525 e-147
gb|BE357880.1|BE357880 DG1_23_A05.b1_A002 Dark Grown 1 (DG1... 515 e-144
gb|BE357259.1|BE357259 DG1_148_F01.b1_A002 Dark Grown 1 (DG... 509 e-142
gb|BE593412.1|BE593412 WS1_97_E06.b1_A002 Water-stressed 1 ... 509 e-142
gb|CD223866.1|CD223866 CCC1_30_C01.g1_A007 Callus culture/c... 509 e-142
gb|CN129480.1|CN129480 RHOH1_35_D12.g1_A002 Acid- and alkal... 509 e-142
gb|CX607699.1|CX607699 ANR1_30_E10.b1_A002 Anaerobic roots ... 509 e-142
gb|CX607784.1|CX607784 ANR1_30_E10.g1_A002 Anaerobic roots ... 509 e-142
gb|BE358473.1|BE358473 DG1_30_B04.b1_A002 Dark Grown 1 (DG1... 492 e-137
gb|CN129681.1|CN129681 RHOH1_36_F11.g1_A002 Acid- and alkal... 478 e-133
gb|CD219572.1|CD219572 CCC1_57_F03.g1_A007 Callus culture/c... 470 e-130
gb|CX609153.1|CX609153 ANR1_11_B01.b1_A002 Anaerobic roots ... 470 e-130
gb|CX609235.1|CX609235 ANR1_11_B01.g1_A002 Anaerobic roots ... 470 e-130
gb|CF758943.1|CF758943 DSAF1_38_D07.g1_A011 Drought-stresse... 464 e-129
gb|CD429786.1|CD429786 ETH1_15_G07.g1_A002 Ethylene-treated... 462 e-128
gb|CF769342.1|CF769342 DSBF1_1_C02.b1_A010 Drought-stressed... 462 e-128
gb|BE361810.1|BE361810 DG1_82_A04.g1_A002 Dark Grown 1 (DG1... 458 e-127
gb|BE356291.1|BE356291 DG1_124_G04.b1_A002 Dark Grown 1 (DG... 456 e-126
gb|BG465977.1|BG465977 RHIZ2_47_A04.g1_A003 Rhizome2 (RHIZ2... 456 e-126
gb|BE358665.1|BE358665 DG1_30_B04.g1_A002 Dark Grown 1 (DG1... 446 e-123
gb|BE360905.1|BE360905 DG1_67_E01.g1_A002 Dark Grown 1 (DG1... 436 e-120
gb|AW680448.1|AW680448 WS1_5_B07.b1_A002 Water-stressed 1 (... 434 e-120
gb|AW671789.1|AW671789 LG1_351_A03.b1_A002 Light Grown 1 (L... 432 e-119
gb|AW672360.1|AW672360 LG1_359_D09.b1_A002 Light Grown 1 (L... 432 e-119
gb|BE356676.1|BE356676 DG1_12_B12.b1_A002 Dark Grown 1 (DG1... 432 e-119
gb|BE356709.1|BE356709 DG1_12_E10.b1_A002 Dark Grown 1 (DG1... 432 e-119
gb|BF176936.1|BF176936 EM1_4_F01.b1_A002 Embryo 1 (EM1) Sor... 430 e-118
gb|BG411311.1|BG411311 EM1_20_C08.b1_A002 Embryo 1 (EM1) So... 428 e-118
gb|CN125322.1|CN125322 RHOH1_10_H09.b1_A002 Acid- and alkal... 424 e-117
gb|BE355846.1|BE355846 DG1_11_E11.b1_A002 Dark Grown 1 (DG1... 420 e-115
gb|BE355847.1|BE355847 DG1_11_E10.b1_A002 Dark Grown 1 (DG1... 420 e-115
gb|BG560199.1|BG560199 RHIZ2_71_E04.b1_A003 Rhizome2 (RHIZ2... 416 e-114
gb|BM323857.1|BM323857 PIC1_28_D10.b1_A002 Pathogen-infecte... 416 e-114
gb|CW247925.1|CW247925 104_709_11222021_116_35029_029 Sorgh... 414 e-114
gb|CF756644.1|CF756644 DSAF1_6_G09.g1_A011 Drought-stressed... 410 e-112
gb|BE357329.1|BE357329 DG1_148_F01.g1_A002 Dark Grown 1 (DG... 408 e-112
gb|CN125132.1|CN125132 RHOH1_9_C09.b1_A002 Acid- and alkali... 408 e-112
gb|BG053079.1|BG053079 RHIZ2_16_D04.b1_A003 Rhizome2 (RHIZ2... 402 e-110
gb|CF488419.1|CF488419 POL1_49_G09.g1_A002 Pollen Sorghum b... 400 e-110
gb|BF481688.1|BF481688 FM1_21_B08.b1_A003 Floral-Induced Me... 394 e-108
gb|BG102911.1|BG102911 RHIZ2_34_H05.b1_A003 Rhizome2 (RHIZ2... 394 e-108
gb|BE358036.1|BE358036 DG1_23_A05.g1_A002 Dark Grown 1 (DG1... 391 e-107
gb|BG049990.1|BG049990 FM1_65_A05.b1_A003 Floral-Induced Me... 389 e-106
gb|BF588359.1|BF588359 FM1_40_G05.b1_A003 Floral-Induced Me... 383 e-104
gb|AW676908.1|AW676908 DG1_2_G10.b1_A002 Dark Grown 1 (DG1)... 381 e-104
gb|CN129591.1|CN129591 RHOH1_36_F11.b3_A002 Acid- and alkal... 375 e-102
gb|AW672446.1|AW672446 LG1_359_D09.g1_A002 Light Grown 1 (L... 371 e-101
gb|CN124867.1|CN124867 RHOH1_7_H12.b1_A002 Acid- and alkali... 371 e-101
gb|BM329957.1|BM329957 PIC1_45_D08.g1_A002 Pathogen-infecte... 369 e-100
gb|AW923999.1|AW923999 WS1_32_F02.b1_A002 Water-stressed 1 ... 367 1e-099
gb|CF072247.1|CF072247 FE1_6_G08.b1_A002 Iron-deficient see... 365 5e-099
gb|CD229920.1|CD229920 CCC1_57_F03.b1_A007 Callus culture/c... 361 8e-098
gb|BF481524.1|BF481524 FM1_21_B08.g1_A003 Floral-Induced Me... 359 3e-097
gb|BG102589.1|BG102589 RHIZ2_34_H05.g1_A003 Rhizome2 (RHIZ2... 359 3e-097
gb|CF759379.1|CF759379 DSAF1_44_E10.b1_A011 Drought-stresse... 355 5e-096
gb|AW676922.1|AW676922 DG1_2_B09.b1_A002 Dark Grown 1 (DG1)... 347 1e-093
gb|CF759302.1|CF759302 DSAF1_43_D12.b1_A011 Drought-stresse... 347 1e-093
gb|AW924774.1|AW924774 WS1_72_C04.b1_A002 Water-stressed 1 ... 345 5e-093
gb|CF771942.1|CF771942 DSBF1_26_D10.g9_A010 Drought-stresse... 345 5e-093
gb|BF586953.1|BF586953 FM1_31_E06.b1_A003 Floral-Induced Me... 339 3e-091
gb|CF432941.1|CF432941 NIT1_20_B01.b1_A002 Nitrogen-deficie... 339 3e-091
gb|BE356763.1|BE356763 DG1_12_B12.g1_A002 Dark Grown 1 (DG1... 335 5e-090
gb|AW678451.1|AW678451 WS1_16_A08.b1_A002 Water-stressed 1 ... 333 2e-089
gb|AW678606.1|AW678606 WS1_16_A08.g1_A002 Water-stressed 1 ... 333 2e-089
gb|BE593102.1|BE593102 WS1_97_E06.g1_A002 Water-stressed 1 ... 333 2e-089
gb|CF769426.1|CF769426 DSBF1_1_C02.g1_A010 Drought-stressed... 333 2e-089
gb|BE356800.1|BE356800 DG1_12_E10.g1_A002 Dark Grown 1 (DG1... 329 3e-088
gb|BM330600.1|BM330600 PIC1_54_A12.g1_A002 Pathogen-infecte... 327 1e-087
gb|CF482445.1|CF482445 POL1_7_A12.b1_A002 Pollen Sorghum bi... 327 1e-087
gb|CF488344.1|CF488344 POL1_49_G09.b1_A002 Pollen Sorghum b... 325 4e-087
gb|BE355895.1|BE355895 DG1_11_E10.g1_A002 Dark Grown 1 (DG1... 321 7e-086
gb|BF704886.1|BF704886 FM1_52_G04.b1_A003 Floral-Induced Me... 319 3e-085
gb|BF587805.1|BF587805 FM1_40_G05.g1_A003 Floral-Induced Me... 313 2e-083
gb|CN125193.1|CN125193 RHOH1_9_C09.g1_A002 Acid- and alkali... 307 1e-081
gb|BG558691.1|BG558691 RHIZ2_59_B11.g1_A003 Rhizome2 (RHIZ2... 297 1e-078
gb|AI723966.1|AI723966 RHIZ1_25_B04.y1_A001 Rhizome1 (RHIZ1... 287 1e-075
gb|CW423961.1|CW423961 fsbb001f134a22f0 Sorghum methylation... 285 4e-075
gb|BG817531.1|BG817531 EM1_74_C02.b1_A002 Embryo 1 (EM1) So... 285 4e-075
gb|BG158887.1|BG158887 RHIZ2_43_H01.b1_A003 Rhizome2 (RHIZ2... 281 6e-074
gb|BG053078.1|BG053078 RHIZ2_16_D03.b1_A003 Rhizome2 (RHIZ2... 276 4e-072
gb|BE360868.1|BE360868 DG1_67_A04.g1_A002 Dark Grown 1 (DG1... 272 6e-071
gb|BG557516.1|BG557516 EM1_54_B12.b1_A002 Embryo 1 (EM1) So... 272 6e-071
gb|BG356895.1|BG356895 OV2_11_D01.g1_A002 Ovary 2 (OV2) Sor... 270 2e-070
gb|BG673858.1|BG673858 EM1_20_C08.g1_A002 Embryo 1 (EM1) So... 258 9e-067
gb|AW679854.1|AW679854 WS1_32_F02.g1_A002 Water-stressed 1 ... 256 3e-066
gb|BF657054.1|BF657054 OV2_18_G07.g1_A002 Ovary 2 (OV2) Sor... 256 3e-066
gb|BG052359.1|BG052359 RHIZ2_12_G04.b1_A003 Rhizome2 (RHIZ2... 254 1e-065
gb|BF655646.1|BF655646 FM1_47_A11.b1_A003 Floral-Induced Me... 252 5e-065
gb|BG053014.1|BG053014 RHIZ2_16_D04.g1_A003 Rhizome2 (RHIZ2... 250 2e-064
gb|BM331083.1|BM331083 PIC1_69_D09.g1_A002 Pathogen-infecte... 250 2e-064
gb|BF656637.1|BF656637 FM1_52_G04.g1_A003 Floral-Induced Me... 248 8e-064
gb|BM330692.1|BM330692 PIC1_55_C02.g1_A002 Pathogen-infecte... 248 8e-064
gb|BE593523.1|BE593523 WS1_100_C10.b1_A002 Water-stressed 1... 234 1e-059
gb|CF770715.1|CF770715 DSBF1_9_G12.b1_A010 Drought-stressed... 226 3e-057
gb|CF770798.1|CF770798 DSBF1_9_G12.g1_A010 Drought-stressed... 226 3e-057
gb|BF655845.1|BF655845 FM1_41_C07.b1_A003 Floral-Induced Me... 218 7e-055
gb|BG713844.1|BG713844 EM1_20_C08.g2_A002 Embryo 1 (EM1) So... 214 1e-053
gb|BF586874.1|BF586874 FM1_31_E06.g1_A003 Floral-Induced Me... 212 5e-053
gb|BM328366.1|BM328366 PIC1_28_D10.g1_A002 Pathogen-infecte... 212 5e-053
gb|CF772432.1|CF772432 DSBF1_34_H10.g1_A010 Drought-stresse... 208 7e-052
gb|BE361806.1|BE361806 DG1_82_A04.b1_A002 Dark Grown 1 (DG1... 200 2e-049
gb|BE364980.1|BE364980 PI1_22_G11.b1_A002 Pathogen induced ... 196 3e-048
gb|BG240789.1|BG240789 OV1_38_C06.g1_A002 Ovary 1 (OV1) Sor... 196 3e-048
gb|BE353026.1|BE353026 DG1_2_G12.g1_A002 Dark Grown 1 (DG1)... 194 1e-047
gb|CN128465.1|CN128465 RHOH1_29_E09.g1_A002 Acid- and alkal... 194 1e-047
gb|CN129332.1|CN129332 RHOH1_34_G10.g1_A002 Acid- and alkal... 194 1e-047
gb|CF770878.1|CF770878 DSBF1_11_A02.g1_A010 Drought-stresse... 192 4e-047
gb|BG240093.1|BG240093 OV1_17_H01.b1_A002 Ovary 1 (OV1) Sor... 188 7e-046
gb|BE355894.1|BE355894 DG1_11_E11.g1_A002 Dark Grown 1 (DG1... 186 3e-045
gb|BF176742.1|BF176742 EM1_4_F01.g1_A002 Embryo 1 (EM1) Sor... 178 6e-043
gb|BG053889.1|BG053889 RHIZ2_11_C03.b1_A003 Rhizome2 (RHIZ2... 178 6e-043
gb|BE360862.1|BE360862 DG1_67_A04.b2_A002 Dark Grown 1 (DG1... 176 3e-042
gb|BG465276.1|BG465276 EM1_74_C02.g1_A002 Embryo 1 (EM1) So... 176 3e-042
gb|BF587455.1|BF587455 FM1_36_E10.b1_A003 Floral-Induced Me... 174 1e-041
gb|BG053591.1|BG053591 RHIZ2_11_C03.g1_A003 Rhizome2 (RHIZ2... 170 2e-040
gb|CW289532.1|CW289532 104_768_11412530_116_35546_007 Sorgh... 167 2e-039
gb|CW289533.1|CW289533 104_768_11412530_148_35550_007 Sorgh... 167 2e-039
gb|CW484715.1|CW484715 fsbb001f247a10f0 Sorghum methylation... 167 2e-039
gb|CW484716.1|CW484716 fsbb001f247a10k0 Sorghum methylation... 167 2e-039
gb|CW499769.1|CW499769 fsbb001f294l10f0 Sorghum methylation... 167 2e-039
gb|BE360839.1|BE360839 DG1_67_E01.b2_A002 Dark Grown 1 (DG1... 167 2e-039
gb|BG052290.1|BG052290 RHIZ2_12_G04.g1_A003 Rhizome2 (RHIZ2... 165 1e-038
gb|CW141514.1|CW141514 104_532_11136352_148_34929_056 Sorgh... 143 4e-032
gb|CW367979.1|CW367979 fsbb001f041l10f0 Sorghum methylation... 143 4e-032
gb|CF760858.1|CF760858 DSAF1_67_F07.b1_A011 Drought-stresse... 135 9e-030
gb|CW383213.1|CW383213 fsbb001f065j13f0 Sorghum methylation... 123 3e-026
gb|CN124947.1|CN124947 RHOH1_7_H12.g1_A002 Acid- and alkali... 123 3e-026
gb|BE593319.1|BE593319 WS1_100_C10.g1_A002 Water-stressed 1... 115 8e-024
gb|BG053013.1|BG053013 RHIZ2_16_D03.g1_A003 Rhizome2 (RHIZ2... 115 8e-024
gb|CD429738.1|CD429738 ETH1_15_G07.b1_A002 Ethylene-treated... 115 8e-024
gb|BG052289.1|BG052289 RHIZ2_12_G03.g1_A003 Rhizome2 (RHIZ2... 113 3e-023
gb|CN128388.1|CN128388 RHOH1_29_E09.b1_A002 Acid- and alkal... 111 1e-022
gb|CN129248.1|CN129248 RHOH1_34_G10.b3_A002 Acid- and alkal... 111 1e-022
gb|AW922569.1|AW922569 DG1_45_G03.g1_A002 Dark Grown 1 (DG1... 103 3e-020
gb|CF758411.1|CF758411 DSAF1_31_D12.g1_A011 Drought-stresse... 101 1e-019
gb|CW300174.1|CW300174 104_783_11463512_116_36248_024 Sorgh... 88 2e-015
gb|CW344260.1|CW344260 104_846_11487861_116_36189_081 Sorgh... 88 2e-015
gb|CW344261.1|CW344261 104_846_11487861_148_36190_081 Sorgh... 88 2e-015
gb|CW458306.1|CW458306 fsbb001f204i10f0 Sorghum methylation... 88 2e-015
gb|CW383214.1|CW383214 fsbb001f065j13k0 Sorghum methylation... 80 4e-013
gb|CW462516.1|CW462516 fsbb001f210l07f0 Sorghum methylation... 76 7e-012
gb|BF506961.1|BF506961 11349P-9b Pooled green leaf and root... 76 7e-012
gb|CW037120.1|CW037120 104_268_10504157_114_30381 Sorghum m... 74 3e-011
gb|CW315442.1|CW315442 104_806_11472366_148_35830_023 Sorgh... 74 3e-011
gb|AW746788.1|AW746788 WS1_55_A08.b1_A002 Water-stressed 1 ... 72 1e-010
gb|AW746794.1|AW746794 WS1_55_A08.g1_A002 Water-stressed 1 ... 72 1e-010
gb|BF655791.1|BF655791 FM1_41_C07.g1_A003 Floral-Induced Me... 72 1e-010
gb|CW153957.1|CW153957 104_555_11145329_148_36340_065 Sorgh... 58 2e-006
gb|BF506952.1|BF506952 11349P-22a Pooled green leaf and roo... 58 2e-006
gb|BZ627921.1|BZ627921 ih56d06.b1 WGS-SbicolorF (DH5a methy... 50 4e-004
gb|CW064608.1|CW064608 104_310_10522665_114_30141 Sorghum m... 50 4e-004
gb|CW088128.1|CW088128 104_433_10948025_114_32574_079 Sorgh... 50 4e-004
gb|CW088129.1|CW088129 104_433_10948025_116_32577_079 Sorgh... 50 4e-004
gb|CW101227.1|CW101227 104_468_11004526_116_34399_081 Sorgh... 50 4e-004
gb|CW295165.1|CW295165 104_776_11460786_116_35617_073 Sorgh... 50 4e-004
gb|BE358450.1|BE358450 DG1_29_E09.g1_A002 Dark Grown 1 (DG1... 50 4e-004
gb|BG049427.1|BG049427 OV1_19_G09.g1_A002 Ovary 1 (OV1) Sor... 50 4e-004
gb|BI245818.1|BI245818 IP1_64_G12.g1_A002 Immature pannicle... 50 4e-004
gb|CX609711.1|CX609711 ANR1_14_F12.b1_A002 Anaerobic roots ... 50 4e-004
gb|CL181126.1|CL181126 104_391_10896528_116_31928_288 Sorgh... 46 0.006
gb|CL181127.1|CL181127 104_391_10896528_148_31927_288 Sorgh... 46 0.006
gb|CW224919.1|CW224919 104_662_11204077_148_37200_057 Sorgh... 46 0.006
gb|CW236180.1|CW236180 104_692_11215477_116_37501_063 Sorgh... 46 0.006
gb|CW381321.1|CW381321 fsbb001f062k17f0 Sorghum methylation... 46 0.006
gb|CL190338.1|CL190338 104_408_10906011_116_32503_010 Sorgh... 44 0.024
gb|CW404075.1|CW404075 fsbb001f096b04k0 Sorghum methylation... 44 0.024
gb|CW123207.1|CW123207 104_502_11111088_148_34686_090 Sorgh... 42 0.096
gb|CW252006.1|CW252006 104_714_11224254_116_35069_017 Sorgh... 42 0.096
gb|BE126101.1|BE126101 DG1_65_E01.g1_A002 Dark Grown 1 (DG1... 42 0.096
gb|BE917828.1|BE917828 OV1_7_F04.g1_A002 Ovary 1 (OV1) Sorg... 42 0.096
gb|BE917911.1|BE917911 OV1_7_F04.b1_A002 Ovary 1 (OV1) Sorg... 42 0.096
gb|BG240865.1|BG240865 OV1_39_C02.g1_A002 Ovary 1 (OV1) Sor... 42 0.096
gb|BG933090.1|BG933090 WS1_29_B01.b1_A002 Water-stressed 1 ... 42 0.096
gb|BM318561.1|BM318561 PI1_15_A05.b9_A002 Pathogen induced ... 42 0.096
gb|CD428031.1|CD428031 ETH1_32_F01.b1_A002 Ethylene-treated... 42 0.096
gb|CD428139.1|CD428139 ETH1_32_F01.g1_A002 Ethylene-treated... 42 0.096
gb|CF758554.1|CF758554 DSAF1_33_E06.g1_A011 Drought-stresse... 42 0.096
gb|CF760298.1|CF760298 DSAF1_58_A07.b1_A011 Drought-stresse... 42 0.096
gb|CW172787.1|CW172787 104_584_11156480_116_36548_030 Sorgh... 40 0.38
gb|CW183488.1|CW183488 104_599_11164643_148_36676_042 Sorgh... 40 0.38
gb|CW299001.1|CW299001 104_781_11462875_116_35660_068 Sorgh... 40 0.38
gb|CW395470.1|CW395470 fsbb001f083i05k0 Sorghum methylation... 40 0.38
gb|CW495773.1|CW495773 fsbb001f287l02k0 Sorghum methylation... 40 0.38
>gb|CD210976.1|CD210976 HS1_58_D11.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_58_D11_A012 3', mRNA sequence
Length = 679
Score = 904 bits (456), Expect = 0.0
Identities = 623/676 (92%), Gaps = 12/676 (1%)
Strand = Plus / Plus
Query: 166 gcttccagctccgatcgatctgatccctccccaccaccgctcccatggcggaccaactca 225
|||||| |||||||||||| |||| || |||||||||| |||||||||||||| ||||
Sbjct: 12 gcttcccgctccgatcgatttgat---tcgccaccaccgcgcccatggcggaccagctca 68
Query: 226 ccgacgaccagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatg 285
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 69 ccgacgaccagatcgctgagttcaaggaggccttcagcctattcgacaaggacggggatg 128
Query: 286 gttgcatcacgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacag 345
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 129 gttgcatcacgaccaaggagctgggaactgtcatgcgttcactagggcaaaaccctacag 188
Query: 346 aggctgagctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgatt 405
|||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||
Sbjct: 189 aggctgagctccaggacatgattaatgaggtcgatgctgatggcaacggcaccattgatt 248
Query: 406 ttccagagtttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagc 465
||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 249 ttccagagtttctcaacctcatggctcgcaagatgaaggacacggactctgaggaagagc 308
Query: 466 tcaaggaggcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagc 525
||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 309 tcaaggaggccttccgtgtgtttgacaaggaccagaacggcttcatctctgctgccgagc 368
Query: 526 tccgccatgtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatga 585
||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||
Sbjct: 369 tccgccatgtcatgacaaatcttggtgagaagctaactgatgaggaggtggatgagatga 428
Query: 586 tccgtgaggctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtca 645
|||||||||||||||| ||||||||||| ||||| ||||| ||||||||||| || ||||
Sbjct: 429 tccgtgaggctgatgtggatggtgatggtcagatcaactatgaggagtttgtcaaagtca 488
Query: 646 tgatggccaagtgagccacaaaagcataagctcaaggcggagaggattgtgcactgcata 705
|||||||||||||||||||| || ||||| || |||||||||| ||||| ||| ||||||
Sbjct: 489 tgatggccaagtgagccacagaaccataatctgaaggcggagaagattgggcattgcata 548
Query: 706 ttagtcaagatgcaatgcaactcttatttcatcgaat---tccagtgaaacattctgcta 762
||||||||| ||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 549 ttagtcaag-----atgcaactcttatttcatcgacttcctccagtgaaacattctgcta 603
Query: 763 gttgtagtttttgaaaggcaatgcagttgctgctttgttcttccct-ccagtgtgttttc 821
||||||||| |||||||| ||| |||| ||||||||||||||||| |||||||||||||
Sbjct: 604 gttgtagttgctgaaaggcgatgtagttcctgctttgttcttccctcccagtgtgttttc 663
Query: 822 agaactgttgattcat 837
|||| ||||| |||||
Sbjct: 664 agaaatgttgtttcat 679
>gb|BE596652.1|BE596652 PI1_58_H11.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 645
Score = 856 bits (432), Expect = 0.0
Identities = 580/628 (92%), Gaps = 11/628 (1%)
Strand = Plus / Plus
Query: 166 gcttccagctccgatcgatctgatccctccccaccaccgctcccatggcggaccaactca 225
|||||| |||||||||||| |||| || |||||||||| |||||||||||||| ||||
Sbjct: 23 gcttcccgctccgatcgatttgat---tcgccaccaccgcgcccatggcggaccagctca 79
Query: 226 ccgacgaccagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatg 285
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 80 ccgacgaccagatcgctgagttcaaggaggccttcagcctattcgacaaggacggggatg 139
Query: 286 gttgcatcacgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacag 345
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 140 gttgcatcacgaccaaggagctgggaactgtcatgcgttcactagggcaaaaccctacag 199
Query: 346 aggctgagctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgatt 405
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 200 aggctgagctccaggacatgatcaatgaggtcgatgctgatggcaacggcaccattgatt 259
Query: 406 ttccagagtttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagc 465
||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 260 ttccagagtttctcaacctcatggctcgcaagatgaaggacacggactctgaggaagagc 319
Query: 466 tcaaggaggcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagc 525
||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 320 tcaaggaggccttccgtgtgtttgacaaggaccagaacggcttcatctctgctgccgagc 379
Query: 526 tccgccatgtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatga 585
||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||
Sbjct: 380 tccgccatgtcatgacaaatcttggtgagaagctaactgatgaggaggtggatgagatga 439
Query: 586 tccgtgaggctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtca 645
|||||||||||||||| ||||||||||| ||||| ||||| ||||||||||| || ||||
Sbjct: 440 tccgtgaggctgatgtggatggtgatggtcagatcaactatgaggagtttgtcaaagtca 499
Query: 646 tgatggccaagtgagccacaaaagcataagctcaaggcggagaggattgtgcactgcata 705
|||||||||||||||||||| || ||||| || |||||||||| ||||| ||| ||||||
Sbjct: 500 tgatggccaagtgagccacagaaccataatctgaaggcggagaagattgggcattgcata 559
Query: 706 ttagtcaagatgcaatgcaactcttatttcatcgaat---tccagtgaaacattctgcta 762
||||||||| ||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 560 ttagtcaag-----atgcaactcttatttcatcgacttcctccagtgaaacattctgcta 614
Query: 763 gttgtagtttttgaaaggcaatgcagtt 790
||||||||| |||||||| ||| ||||
Sbjct: 615 gttgtagttgctgaaaggcgatgtagtt 642
>gb|CD432246.1|CD432246 ETH1_26_B08.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_26_B08_A002 5', mRNA sequence
Length = 664
Score = 837 bits (422), Expect = 0.0
Identities = 555/598 (92%), Gaps = 11/598 (1%)
Strand = Plus / Plus
Query: 166 gcttccagctccgatcgatctgatccctccccaccaccgctcccatggcggaccaactca 225
|||||| ||||||||||||||||| || |||||||||| |||||||||||||| ||||
Sbjct: 75 gcttcccgctccgatcgatctgat---tcgccaccaccgcgcccatggcggaccagctca 131
Query: 226 ccgacgaccagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatg 285
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 132 ccgacgaccagatcgctgagttcaaggaggccttcagcctattcgacaaggacggggatg 191
Query: 286 gttgcatcacgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacag 345
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 192 gttgcatcacgaccaaggagctgggaactgtcatgcgttcactagggcaaaaccctacag 251
Query: 346 aggctgagctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgatt 405
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 252 aggctgagctccaggacatgatcaatgaggtcgatgctgatggcaacggcaccattgatt 311
Query: 406 ttccagagtttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagc 465
||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 312 ttccagagtttctcaacctcatggctcgcaagatgaaggacacggactctgaggaagagc 371
Query: 466 tcaaggaggcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagc 525
||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 372 tcaaggaggccttccgtgtgtttgacaaggaccagaacggcttcatctctgctgccgagc 431
Query: 526 tccgccatgtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatga 585
||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||
Sbjct: 432 tccgccatgtcatgacaaatcttggtgagaagctaactgatgaggaggtggatgagatga 491
Query: 586 tccgtgaggctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtca 645
|||||||||||||||| ||||||||||| ||||| ||||| ||||||||||| || ||||
Sbjct: 492 tccgtgaggctgatgtggatggtgatggtcagatcaactatgaggagtttgtcaaagtca 551
Query: 646 tgatggccaagtgagccacaaaagcataagctcaaggcggagaggattgtgcactgcata 705
|||||||||||||||||||| || ||||| || |||||||||| ||||| ||| ||||||
Sbjct: 552 tgatggccaagtgagccacagaaccataatctgaaggcggagaagattgggcattgcata 611
Query: 706 ttagtcaagatgcaatgcaactcttatttcatcgaat---tccagtgaaacattctgc 760
||||||||| ||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 612 ttagtcaag-----atgcaactcttatttcatcgacttcctccagtgaaacattctgc 664
>gb|BQ656051.1|BQ656051 pRC0367 Sorghum halepense rhizome cDNA library Sorghum halepense
cDNA clone pRC0367, mRNA sequence
Length = 570
Score = 787 bits (397), Expect = 0.0
Identities = 531/575 (92%), Gaps = 8/575 (1%)
Strand = Plus / Plus
Query: 313 ctgtcatgcgttcactggggcaaaaccctacagaggctgagctccaggacatgatcaatg 372
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgtcatgcgttcactagggcaaaaccctacagaggctgagctccaggacatgatcaatg 60
Query: 373 aggtcgatgccgatggcaacggcaccatcgattttccagagtttctgaaccttatggctc 432
|||||||||| ||||||||||||||||| ||||||||||||||||| ||||| |||||||
Sbjct: 61 aggtcgatgctgatggcaacggcaccattgattttccagagtttctcaacctcatggctc 120
Query: 433 gcaagatgaaggacaccgactctgaggaagagctcaaggaggcctttcgtgtgtttgaca 492
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 121 gcaagatgaaggacacggactctgaggaagagctcaaggaggccttccgtgtgtttgaca 180
Query: 493 aggaccagaacggcttcatctccgccgccgagctccgccatgtcatgacaaatcttgggg 552
|||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |
Sbjct: 181 aggaccagaacggcttcatctctgctgccgagctccgccatgtcatgacaaatcttggtg 240
Query: 553 agaagctaactgatgaggaggtagacgagatgatccgtgaggctgatgtcgatggtgatg 612
|||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 241 agaagctaactgatgaggaggtggatgagatgatccgtgaggctgatgtggatggtgatg 300
Query: 613 gccagattaactacgaggagtttgttaaggtcatgatggccaagtgagccacaaaagcat 672
| ||||| ||||| ||||||||||| || |||||||||||||||||||||||| || |||
Sbjct: 301 gtcagatcaactatgaggagtttgtcaaagtcatgatggccaagtgagccacagaaccat 360
Query: 673 aagctcaaggcggagaggattgtgcactgcatattagtcaagatgcaatgcaactcttat 732
|| || |||||||||| ||||| ||| ||||||||||||||| |||||||||||||
Sbjct: 361 aatctgaaggcggagaagattgggcattgcatattagtcaag-----atgcaactcttat 415
Query: 733 ttcatcgaat---tccagtgaaacattctgctagttgtagtttttgaaaggcaatgcagt 789
|||||||| | ||||||||||||||||||||||||||||| |||||||| ||| |||
Sbjct: 416 ttcatcgacttcctccagtgaaacattctgctagttgtagttgctgaaaggcgatgtagt 475
Query: 790 tgctgctttgttcttccctccagtgtgttttcagaactgttgattcatgtgaaactgtaa 849
| |||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||
Sbjct: 476 tcctgctttgttcttccctccagtgtgttttcagaaatgttgtttcatgtgaacttgtaa 535
Query: 850 tgattgccctccctgctgtgtcttggttgcagttg 884
||||||||||||||||||||||||| |||||||||
Sbjct: 536 tgattgccctccctgctgtgtcttgattgcagttg 570
>gb|BG241357.1|BG241357 RHIZ2_51_A07.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 554
Score = 779 bits (393), Expect = 0.0
Identities = 509/547 (93%), Gaps = 8/547 (1%)
Strand = Plus / Plus
Query: 282 gatggttgcatcacgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccct 341
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 gatggttgcatcacgaccaaggagctgggaactgtcatgcgttcactagggcaaaaccct 60
Query: 342 acagaggctgagctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatc 401
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 61 acagaggctgagctccaggacatgatcaatgaggtcgatgctgatggcaacggcaccatt 120
Query: 402 gattttccagagtttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaa 461
||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 121 gattttccagagtttctcaacctcatggctcgcaagatgaaggacacggactctgaggaa 180
Query: 462 gagctcaaggaggcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgcc 521
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 181 gagctcaaggaggcctttcgtgtgtttgacaaggaccagaacggcttcatctctgctgcc 240
Query: 522 gagctccgccatgtcatgacaaatcttggggagaagctaactgatgaggaggtagacgag 581
||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||
Sbjct: 241 gagctccgccatgtcatgacaaatcttggtgagaagctaactgatgaggaggtggatgag 300
Query: 582 atgatccgtgaggctgatgtcgatggtgatggccagattaactacgaggagtttgttaag 641
|||||||||||||||||||| ||||||||||| ||||| ||||| ||||||||||| ||
Sbjct: 301 atgatccgtgaggctgatgtggatggtgatggtcagatcaactatgaggagtttgtcaaa 360
Query: 642 gtcatgatggccaagtgagccacaaaagcataagctcaaggcggagaggattgtgcactg 701
|||||||||||||||||||||||| || ||||| || |||||||||| ||||| ||| ||
Sbjct: 361 gtcatgatggccaagtgagccacagaaccataatctgaaggcggagaagattgggcattg 420
Query: 702 catattagtcaagatgcaatgcaactcttatttcatcgaat---tccagtgaaacattct 758
||||||||||||| ||||||||||||||||||||| | ||||||||||||||||
Sbjct: 421 catattagtcaag-----atgcaactcttatttcatcgacttcctccagtgaaacattct 475
Query: 759 gctagttgtagtttttgaaaggcaatgcagttgctgctttgttcttccctccagtgtgtt 818
||||||||||||| |||||||| ||| |||| |||||||||||||||||||||||||||
Sbjct: 476 gctagttgtagttgctgaaaggcgatgtagttcctgctttgttcttccctccagtgtgtt 535
Query: 819 ttcagaa 825
|||||||
Sbjct: 536 ttcagaa 542
>gb|BG101932.1|BG101932 RHIZ2_21_F05.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 552
Score = 775 bits (391), Expect = 0.0
Identities = 507/545 (93%), Gaps = 8/545 (1%)
Strand = Plus / Plus
Query: 284 tggttgcatcacgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctac 343
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1 tggttgcatcacgaccaaggagctgggaactgtcatgcgttcactagggcaaaaccctac 60
Query: 344 agaggctgagctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcga 403
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 61 agaggctgagctccaggacatgatcaatgaggtcgatgctgatggcaacggcaccattga 120
Query: 404 ttttccagagtttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaaga 463
||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 121 ttttccagagtttctcaacctcatggctcgcaagatgaaggacacggactctgaggaaga 180
Query: 464 gctcaaggaggcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccga 523
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 181 gctcaaggaggcctttcgtgtgtttgacaaggaccagaacggcttcatctctgctgccga 240
Query: 524 gctccgccatgtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagat 583
||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||
Sbjct: 241 gctccgccatgtcatgacaaatcttggtgagaagctaactgatgaggaggtggatgagat 300
Query: 584 gatccgtgaggctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggt 643
|||||||||||||||||| ||||||||||| ||||| ||||| ||||||||||| || ||
Sbjct: 301 gatccgtgaggctgatgtggatggtgatggtcagatcaactatgaggagtttgtcaaagt 360
Query: 644 catgatggccaagtgagccacaaaagcataagctcaaggcggagaggattgtgcactgca 703
|||||||||||||||||||||| || ||||| || |||||||||| ||||| ||| ||||
Sbjct: 361 catgatggccaagtgagccacagaaccataatctgaaggcggagaagattgggcattgca 420
Query: 704 tattagtcaagatgcaatgcaactcttatttcatcgaat---tccagtgaaacattctgc 760
||||||||||| ||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 421 tattagtcaag-----atgcaactcttatttcatcgacttcctccagtgaaacattctgc 475
Query: 761 tagttgtagtttttgaaaggcaatgcagttgctgctttgttcttccctccagtgtgtttt 820
||||||||||| |||||||| ||| |||| |||||||||||||||||||||||||||||
Sbjct: 476 tagttgtagttgctgaaaggcgatgtagttcctgctttgttcttccctccagtgtgtttt 535
Query: 821 cagaa 825
|||||
Sbjct: 536 cagaa 540
>gb|AW746037.1|AW746037 WS1_39_A10.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 520
Score = 773 bits (390), Expect = 0.0
Identities = 473/500 (94%), Gaps = 3/500 (0%)
Strand = Plus / Plus
Query: 166 gcttccagctccgatcgatctgatccctccccaccaccgctcccatggcggaccaactca 225
|||||| ||||||||||||||||| || |||||||||| |||||||||||||| ||||
Sbjct: 17 gcttcccgctccgatcgatctgat---tcgccaccaccgcgcccatggcggaccagctca 73
Query: 226 ccgacgaccagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatg 285
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 74 ccgacgaccagatcgctgagttcaaggaggccttcagcctattcgacaaggacggggatg 133
Query: 286 gttgcatcacgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacag 345
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 134 gttgcatcacgaccaaggagctgggaactgtcatgcgttcactagggcaaaaccctacag 193
Query: 346 aggctgagctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgatt 405
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 194 aggctgagctccaggacatgatcaatgaggtcgatgctgatggcaacggcaccattgatt 253
Query: 406 ttccagagtttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagc 465
||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 254 ttccagagtttctcaacctcatggctcgcaagatgaaggacacggactctgaggaagagc 313
Query: 466 tcaaggaggcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagc 525
||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 314 tcaaggaggccttccgtgtgtttgacaaggaccagaacggcttcatctctgctgccgagc 373
Query: 526 tccgccatgtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatga 585
||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||
Sbjct: 374 tccgccatgtcatgacaaatcttggtgagaagctaactgatgaggaggtggatgagatga 433
Query: 586 tccgtgaggctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtca 645
|||||||||||||||| ||||||||||| ||||| ||||| ||||||||||| || ||||
Sbjct: 434 tccgtgaggctgatgtggatggtgatggtcagatcaactatgaggagtttgtcaaagtca 493
Query: 646 tgatggccaagtgagccaca 665
||||||||||||||||||||
Sbjct: 494 tgatggccaagtgagccaca 513
>gb|BE596728.1|BE596728 PI1_58_H11.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 545
Score = 773 bits (390), Expect = 0.0
Identities = 473/500 (94%), Gaps = 3/500 (0%)
Strand = Plus / Plus
Query: 166 gcttccagctccgatcgatctgatccctccccaccaccgctcccatggcggaccaactca 225
|||||| ||||||||||||||||| || |||||||||| |||||||||||||| ||||
Sbjct: 41 gcttcccgctccgatcgatctgat---tcgccaccaccgcgcccatggcggaccagctca 97
Query: 226 ccgacgaccagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatg 285
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 98 ccgacgaccagatcgctgagttcaaggaggccttcagcctattcgacaaggacggggatg 157
Query: 286 gttgcatcacgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacag 345
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 158 gttgcatcacgaccaaggagctgggaactgtcatgcgttcactagggcaaaaccctacag 217
Query: 346 aggctgagctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgatt 405
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 218 aggctgagctccaggacatgatcaatgaggtcgatgctgatggcaacggcaccattgatt 277
Query: 406 ttccagagtttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagc 465
||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 278 ttccagagtttctcaacctcatggctcgcaagatgaaggacacggactctgaggaagagc 337
Query: 466 tcaaggaggcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagc 525
||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 338 tcaaggaggccttccgtgtgtttgacaaggaccagaacggcttcatctctgctgccgagc 397
Query: 526 tccgccatgtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatga 585
||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||
Sbjct: 398 tccgccatgtcatgacaaatcttggtgagaagctaactgatgaggaggtggatgagatga 457
Query: 586 tccgtgaggctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtca 645
|||||||||||||||| ||||||||||| ||||| ||||| ||||||||||| || ||||
Sbjct: 458 tccgtgaggctgatgtggatggtgatggtcagatcaactatgaggagtttgtcaaagtca 517
Query: 646 tgatggccaagtgagccaca 665
||||||||||||||||||||
Sbjct: 518 tgatggccaagtgagccaca 537
>gb|BE594331.1|BE594331 PI1_32_A10.b2_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 560
Score = 769 bits (388), Expect = 0.0
Identities = 479/509 (94%), Gaps = 3/509 (0%)
Strand = Plus / Plus
Query: 166 gcttccagctccgatcgatctgatccctccccaccaccgctcccatggcggaccaactca 225
|||||| ||||||||||||||||| || |||||||||| |||||||||||||| ||||
Sbjct: 54 gcttcccgctccgatcgatctgat---tcgccaccaccgcgcccatggcggaccagctca 110
Query: 226 ccgacgaccagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatg 285
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 111 ccgacgaccagatcgctgagttcaaggaggccttcagcctattcgacaaggacggggatg 170
Query: 286 gttgcatcacgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacag 345
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 171 gttgcatcacgaccaaggagctgggaactgtcatgcgttcactagggcaaaaccctacag 230
Query: 346 aggctgagctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgatt 405
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 231 aggctgagctccaggacatgatcaatgaggtcgatgctgatggcaacggcaccattgatt 290
Query: 406 ttccagagtttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagc 465
||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 291 ttccagagtttctcaacctcatggctcgcaagatgaaggacacggactctgaggaagagc 350
Query: 466 tcaaggaggcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagc 525
||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 351 tcaaggaggccttccgtgtgtttgacaaggaccagaacggcttcatctctgctgccgagc 410
Query: 526 tccgccatgtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatga 585
||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||
Sbjct: 411 tccgccatgtcatgacaaatcttggtgagaagctaactgatgaggaggtggatgagatga 470
Query: 586 tccgtgaggctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtca 645
|||||||||||||||| ||||||||||| || || ||||| ||||||||||| || ||||
Sbjct: 471 tccgtgaggctgatgtggatggtgatggtcanatcaactatgaggagtttgtcaaagtca 530
Query: 646 tgatggccaagtgagccacaaaagcataa 674
|||||||||||||||||||| || |||||
Sbjct: 531 tgatggccaagtgagccacagaaccataa 559
>gb|BE596545.1|BE596545 PI1_57_E07.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 543
Score = 759 bits (383), Expect = 0.0
Identities = 466/493 (94%), Gaps = 3/493 (0%)
Strand = Plus / Plus
Query: 166 gcttccagctccgatcgatctgatccctccccaccaccgctcccatggcggaccaactca 225
|||||| ||||||||||||||||| || |||||||||| |||||||||||||| ||||
Sbjct: 54 gcttcccgctccgatcgatctgat---tcgccaccaccgcgcccatggcggaccagctca 110
Query: 226 ccgacgaccagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatg 285
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 111 ccgacgaccagatcgctgagttcaaggaggccttcagcctattcgacaaggacggggatg 170
Query: 286 gttgcatcacgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacag 345
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 171 gttgcatcacgaccaaggagctgggaactgtcatgcgttcactagggcaaaaccctacag 230
Query: 346 aggctgagctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgatt 405
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 231 aggctgagctccaggacatgatcaatgaggtcgatgctgatggcaacggcaccattgatt 290
Query: 406 ttccagagtttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagc 465
||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 291 ttccagagtttctcaacctcatggctcgcaagatgaaggacacggactctgaggaagagc 350
Query: 466 tcaaggaggcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagc 525
||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 351 tcaaggaggccttccgtgtgtttgacaaggaccagaacggcttcatctctgctgccgagc 410
Query: 526 tccgccatgtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatga 585
||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||
Sbjct: 411 tccgccatgtcatgacaaatcttggtgagaagctaactgatgaggaggtggatgagatga 470
Query: 586 tccgtgaggctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtca 645
|||||||||||||||| ||||||||||| ||||| ||||| ||||||||||| || ||||
Sbjct: 471 tccgtgaggctgatgtggatggtgatggtcagatcaactatgaggagtttgtcaaagtca 530
Query: 646 tgatggccaagtg 658
|||||||||||||
Sbjct: 531 tgatggccaagtg 543
>gb|BQ655990.1|BQ655990 pRC0217 Sorghum halepense rhizome cDNA library Sorghum halepense
cDNA clone pRC0217, mRNA sequence
Length = 556
Score = 751 bits (379), Expect = 0.0
Identities = 513/557 (92%), Gaps = 8/557 (1%)
Strand = Plus / Plus
Query: 344 agaggctgagctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcga 403
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 1 agaggctgagctccaggacatgatcaatgaggtcgatgctgatggcaacggcaccattga 60
Query: 404 ttttccagagtttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaaga 463
||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 61 ttttccagagtttctcaacctcatggctcgcaagatgaaggacacggactctgaggaaga 120
Query: 464 gctcaaggaggcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccga 523
||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 121 gctcaaggaggccttccgtgtgtttgacaaggaccagaacggcttcatctctgctgccga 180
Query: 524 gctccgccatgtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagat 583
||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||
Sbjct: 181 gctccgccatgtcatgacaaatcttggtgagaagctaactgatgaggaggtggatgagat 240
Query: 584 gatccgtgaggctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggt 643
|||||||||||||||||| ||||||||||| ||||| ||||| ||||||||||| || ||
Sbjct: 241 gatccgtgaggctgatgtggatggtgatggtcagatcaactatgaggagtttgtcaaagt 300
Query: 644 catgatggccaagtgagccacaaaagcataagctcaaggcggagaggattgtgcactgca 703
|||||||||||||||||||||| || ||||| || ||||| |||| ||||| ||| ||||
Sbjct: 301 catgatggccaagtgagccacagaaccataatctgaaggcagagaagattgggcattgca 360
Query: 704 tattagtcaagatgcaatgcaactcttatttcatcgaat---tccagtgaaacattctgc 760
||||||||||| ||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 361 tattagtcaag-----atgcaactcttatttcatcgacttcctccagtgaaacattctgc 415
Query: 761 tagttgtagtttttgaaaggcaatgcagttgctgctttgttcttccctccagtgtgtttt 820
||||||||||| |||||||| ||| |||| |||||||||||||||||||||||||||||
Sbjct: 416 tagttgtagttgctgaaaggcgatgtagttcctgctttgttcttccctccagtgtgtttt 475
Query: 821 cagaactgttgattcatgtgaaactgtaatgattgccctccctgctgtgtcttggttgca 880
||||| ||||| |||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 476 cagaaatgttgtttcatgtgaacttgtaatgattgccctccctgctgtgtcttgattgca 535
Query: 881 gttgaaaccatatgtag 897
|||||||||||||||||
Sbjct: 536 gttgaaaccatatgtag 552
>gb|BG560582.1|BG560582 RHIZ2_59_B11.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 485
Score = 749 bits (378), Expect = 0.0
Identities = 449/472 (95%), Gaps = 3/472 (0%)
Strand = Plus / Plus
Query: 166 gcttccagctccgatcgatctgatccctccccaccaccgctcccatggcggaccaactca 225
|||||| ||||||||||||||||| ||||||||||||| |||||||||||||| ||||
Sbjct: 13 gcttcccgctccgatcgatctgat---tccccaccaccgcgcccatggcggaccagctca 69
Query: 226 ccgacgaccagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatg 285
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 70 ccgacgaccagatcgctgagttcaaggaggccttcagcctattcgacaaggacggggatg 129
Query: 286 gttgcatcacgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacag 345
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 130 gttgcatcacgaccaaggagctgggaactgtcatgcgttcactagggcaaaaccctacag 189
Query: 346 aggctgagctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgatt 405
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 190 aggctgagctccaggacatgatcaatgaggtcgatgctgatggcaacggcaccattgatt 249
Query: 406 ttccagagtttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagc 465
||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 250 ttccagagtttctcaacctcatggctcgcaagatgaaggacacggactctgaggaagagc 309
Query: 466 tcaaggaggcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagc 525
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 310 tcaaggaggcctttcgtgtgtttgacaaggaccagaacggcttcatctctgctgccgagc 369
Query: 526 tccgccatgtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatga 585
||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||
Sbjct: 370 tccgccatgtcatgacaaatcttggtgagaagctaactgatgaggaggtggatgagatga 429
Query: 586 tccgtgaggctgatgtcgatggtgatggccagattaactacgaggagtttgt 637
|||||||||||||||| ||||||||||| ||||| ||||| |||||||||||
Sbjct: 430 tccgtgaggctgatgtggatggtgatggtcagatcaactatgaggagtttgt 481
>gb|BG102165.1|BG102165 RHIZ2_21_F05.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 491
Score = 726 bits (366), Expect = 0.0
Identities = 428/448 (95%), Gaps = 3/448 (0%)
Strand = Plus / Plus
Query: 166 gcttccagctccgatcgatctgatccctccccaccaccgctcccatggcggaccaactca 225
|||||| ||||||||||||||||| ||||||||||||| |||||||||||||| ||||
Sbjct: 44 gcttcccgctccgatcgatctgat---tccccaccaccgcgcccatggcggaccagctca 100
Query: 226 ccgacgaccagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatg 285
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 101 ccgacgaccagatcgctgagttcaaggaggccttcagcctattcgacaaggacggggatg 160
Query: 286 gttgcatcacgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacag 345
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 161 gttgcatcacgaccaaggagctgggaactgtcatgcgttcactagggcaaaaccctacag 220
Query: 346 aggctgagctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgatt 405
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 221 aggctgagctccaggacatgatcaatgaggtcgatgctgatggcaacggcaccattgatt 280
Query: 406 ttccagagtttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagc 465
||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 281 ttccagagtttctcaacctcatggctcgcaagatgaaggacacggactctgaggaagagc 340
Query: 466 tcaaggaggcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagc 525
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 341 tcaaggaggcctttcgtgtgtttgacaaggaccagaacggcttcatctctgctgccgagc 400
Query: 526 tccgccatgtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatga 585
||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||
Sbjct: 401 tccgccatgtcatgacaaatcttggtgagaagctaactgatgaggaggtggatgagatga 460
Query: 586 tccgtgaggctgatgtcgatggtgatgg 613
|||||||||||||||| |||||||||||
Sbjct: 461 tccgtgaggctgatgtggatggtgatgg 488
>gb|BE596467.1|BE596467 PI1_57_E07.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 607
Score = 716 bits (361), Expect = 0.0
Identities = 525/575 (91%), Gaps = 11/575 (1%)
Strand = Plus / Plus
Query: 351 gagctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttcca 410
|||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 1 gagctccaggacatgatcaatgaggtcgatgctgatggcaacggcaccattgattttcca 60
Query: 411 gagtttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaag 470
|||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 61 gagtttctcaacctcatggctcgcaagatgaaggacacggactctgaggaagagctcaag 120
Query: 471 gaggcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgc 530
|||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 121 gaggccttccgtgtgtttgacaaggaccagaacggcttcatctctgctgccgagctccgc 180
Query: 531 catgtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgt 590
|||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||
Sbjct: 181 catgtcatgacaaatcttggtgagaagctaactgatgaggaggtggatgagatgatccgt 240
Query: 591 gaggctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatg 650
||||||||||| ||||||||||| ||||| ||||| ||||||||||| || |||||||||
Sbjct: 241 gaggctgatgtggatggtgatggtcagatcaactatgaggagtttgtcaaagtcatgatg 300
Query: 651 gccaagtgagccacaaaagcataagctcaaggcggagaggattgtgcactgcatattagt 710
||||||||||||||| || ||||| || |||||||||| ||||| ||| |||||||||||
Sbjct: 301 gccaagtgagccacagaaccataatctgaaggcggagaagattgggcattgcatattagt 360
Query: 711 caagatgcaatgcaactcttatttcatcgaat---tccagtgaaacattctgctagttgt 767
|||| ||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 361 caag-----atgcaactcttatttcatcgacttcctccagtgaaacattctgctagttgt 415
Query: 768 agtttttgaaaggcaatgcagttgctgctttgttcttccct-ccagtgtgttttcagaac 826
|||| |||||||| ||| |||| ||||||||||||||||| |||||||||||||||||
Sbjct: 416 agttgctgaaaggcgatgtagttcctgctttgttcttccctaccagtgtgttttcagaaa 475
Query: 827 tgttgatt-catgtgaa-actgtaatgattgccctccctgctgtgtcttggttgcagttg 884
||||| || |||||||| | ||||||||||||||||| |||||||||||| |||||||||
Sbjct: 476 tgttgtttacatgtgaacattgtaatgattgccctccttgctgtgtcttgattgcagttg 535
Query: 885 aaaccatatgtagctacattccccctcccaccacc 919
||||||||||||| || |||| ||||| |||||||
Sbjct: 536 aaaccatatgtagttatattctccctctcaccacc 570
Score = 46.1 bits (23), Expect = 0.006
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 921 ccacacatcaacttctgcttcac 943
|||||||||||||||||||||||
Sbjct: 582 ccacacatcaacttctgcttcac 604
>gb|BM324164.1|BM324164 PIC1_25_C07.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 506
Score = 714 bits (360), Expect = 0.0
Identities = 431/454 (94%), Gaps = 3/454 (0%)
Strand = Plus / Plus
Query: 166 gcttccagctccgatcgatctgatccctccccaccaccgctcccatggcggaccaactca 225
|||||| ||||||||||||||||| || |||||||||| |||||||||||||| ||||
Sbjct: 54 gcttcccgctccgatcgatctgat---tcgccaccaccgcgcccatggcggaccagctca 110
Query: 226 ccgacgaccagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatg 285
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 111 ccgacgaccagatcgctgagttcaaggaggccttcagcctattcgacaaggacggggatg 170
Query: 286 gttgcatcacgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacag 345
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 171 gttgcatcacgaccaaggagctgggaactgtcatgcgttcactagggcaaaaccctacag 230
Query: 346 aggctgagctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgatt 405
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 231 aggctgagctccaggacatgatcaatgaggtcgatgctgatggcaacggcaccattgatt 290
Query: 406 ttccagagtttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagc 465
||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 291 ttccagagtttctcaacctcatggctcgcaagatgaaggacacggactctgaggaagagc 350
Query: 466 tcaaggaggcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagc 525
||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 351 tcaaggaggccttccgtgtgtttgacaaggaccagaacggcttcatctctgctgccgagc 410
Query: 526 tccgccatgtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatga 585
||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||
Sbjct: 411 tccgccatgtcatgacaaatcttggtgagaagctaactgatgaggaggtggatgagatga 470
Query: 586 tccgtgaggctgatgtcgatggtgatggccagat 619
|||||||||||||||| ||||||||||| |||||
Sbjct: 471 tccgtgaggctgatgtggatggtgatggtcagat 504
>gb|BG465644.1|BG465644 RHIZ2_47_A04.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 492
Score = 712 bits (359), Expect = 0.0
Identities = 421/441 (95%), Gaps = 3/441 (0%)
Strand = Plus / Plus
Query: 166 gcttccagctccgatcgatctgatccctccccaccaccgctcccatggcggaccaactca 225
|||||| ||||||||||||||||| ||||||||||||| |||||||||||||| ||||
Sbjct: 55 gcttcccgctccgatcgatctgat---tccccaccaccgcgcccatggcggaccagctca 111
Query: 226 ccgacgaccagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatg 285
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 112 ccgacgaccagatcgctgagttcaaggaggccttcagcctattcgacaaggacggggatg 171
Query: 286 gttgcatcacgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacag 345
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 172 gttgcatcacgaccaaggagctgggaactgtcatgcgttcactagggcaaaaccctacag 231
Query: 346 aggctgagctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgatt 405
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 232 aggctgagctccaggacatgatcaatgaggtcgatgctgatggcaacggcaccattgatt 291
Query: 406 ttccagagtttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagc 465
||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 292 ttccagagtttctcaacctcatggctcgcaagatgaaggacacggactctgaggaagagc 351
Query: 466 tcaaggaggcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagc 525
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 352 tcaaggaggcctttcgtgtgtttgacaaggaccagaacggcttcatctctgctgccgagc 411
Query: 526 tccgccatgtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatga 585
||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||
Sbjct: 412 tccgccatgtcatgacaaatcttggtgagaagctaactgatgaggaggtggatgagatga 471
Query: 586 tccgtgaggctgatgtcgatg 606
|||||||||||||||| ||||
Sbjct: 472 tccgtgaggctgatgtggatg 492
>gb|BF588431.1|BF588431 FM1_36_E10.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 623
Score = 710 bits (358), Expect = 0.0
Identities = 465/500 (93%), Gaps = 8/500 (1%)
Strand = Plus / Plus
Query: 285 ggttgcatcacgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctaca 344
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 110 ggttgcatcacgaccaaggagctgggaactgtcatgcgttcactagggcaaaaccctaca 169
Query: 345 gaggctgagctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgat 404
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 170 gaggctgagctccaggacatgatcaatgaggtcgatgctgatggcaacggcaccattgat 229
Query: 405 tttccagagtttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagag 464
|||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 230 tttccagagtttctcaacctcatggctcgcaagatgaaggacacggactctgaggaagag 289
Query: 465 ctcaaggaggcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgag 524
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 290 ctcaaggaggcctttcgtgtgtttgacaaggaccagaacggcttcatctctgctgccgag 349
Query: 525 ctccgccatgtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatg 584
|||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||
Sbjct: 350 ctccgccatgtcatgacaaatcttggtgagaagctaactgatgaggaggtggatgagatg 409
Query: 585 atccgtgaggctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtc 644
||||||||||||||||| ||||||||||| ||||| ||||| ||||||||||| || |||
Sbjct: 410 atccgtgaggctgatgtggatggtgatggtcagatcaactatgaggagtttgtcaaagtc 469
Query: 645 atgatggccaagtgagccacaaaagcataagctcaaggcggagaggattgtgcactgcat 704
||||||||||||||||||||| || ||||| || |||||||||| ||||| ||| |||||
Sbjct: 470 atgatggccaagtgagccacagaaccataatctgaaggcggagaagattgggcattgcat 529
Query: 705 attagtcaagatgcaatgcaactcttatttcatcgaat---tccagtgaaacattctgct 761
|||||||||| ||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 530 attagtcaag-----atgcaactcttatttcatcgacttcctccagtgaaacattctgct 584
Query: 762 agttgtagtttttgaaaggc 781
|||||||||| ||||||||
Sbjct: 585 agttgtagttgctgaaaggc 604
>gb|BE596353.1|BE596353 PI1_49_G10.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 494
Score = 702 bits (354), Expect = 0.0
Identities = 422/444 (95%), Gaps = 3/444 (0%)
Strand = Plus / Plus
Query: 166 gcttccagctccgatcgatctgatccctccccaccaccgctcccatggcggaccaactca 225
|||||| ||||||||||||||||| || |||||||||| |||||||||||||| ||||
Sbjct: 54 gcttcccgctccgatcgatctgat---tcgccaccaccgcgcccatggcggaccagctca 110
Query: 226 ccgacgaccagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatg 285
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 111 ccgacgaccagatcgctgagttcaaggaggccttcagcctattcgacaaggacggggatg 170
Query: 286 gttgcatcacgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacag 345
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 171 gttgcatcacgaccaaggagctgggaactgtcatgcgttcactagggcaaaaccctacag 230
Query: 346 aggctgagctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgatt 405
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 231 aggctgagctccaggacatgatcaatgaggtcgatgctgatggcaacggcaccattgatt 290
Query: 406 ttccagagtttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagc 465
||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 291 ttccagagtttctcaacctcatggctcgcaagatgaaggacacggactctgaggaagagc 350
Query: 466 tcaaggaggcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagc 525
||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 351 tcaaggaggccttccgtgtgtttgacaaggaccagaacggcttcatctctgctgccgagc 410
Query: 526 tccgccatgtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatga 585
||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||
Sbjct: 411 tccgccatgtcatgacaaatcttggtgagaagctaactgatgaggaggtggatgagatga 470
Query: 586 tccgtgaggctgatgtcgatggtg 609
|||||||||||||||| |||||||
Sbjct: 471 tccgtgaggctgatgtggatggtg 494
>gb|BG273454.1|BG273454 OV2_25_H09.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 489
Score = 702 bits (354), Expect = 0.0
Identities = 422/444 (95%), Gaps = 3/444 (0%)
Strand = Plus / Plus
Query: 166 gcttccagctccgatcgatctgatccctccccaccaccgctcccatggcggaccaactca 225
|||||| ||||||||||||||||| || |||||||||| |||||||||||||| ||||
Sbjct: 49 gcttcccgctccgatcgatctgat---tcgccaccaccgcgcccatggcggaccagctca 105
Query: 226 ccgacgaccagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatg 285
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 106 ccgacgaccagatcgctgagttcaaggaggccttcagcctattcgacaaggacggggatg 165
Query: 286 gttgcatcacgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacag 345
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 166 gttgcatcacgaccaaggagctgggaactgtcatgcgttcactagggcaaaaccctacag 225
Query: 346 aggctgagctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgatt 405
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 226 aggctgagctccaggacatgatcaatgaggtcgatgctgatggcaacggcaccattgatt 285
Query: 406 ttccagagtttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagc 465
||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 286 ttccagagtttctcaacctcatggctcgcaagatgaaggacacggactctgaggaagagc 345
Query: 466 tcaaggaggcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagc 525
||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 346 tcaaggaggccttccgtgtgtttgacaaggaccagaacggcttcatctctgctgccgagc 405
Query: 526 tccgccatgtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatga 585
||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||
Sbjct: 406 tccgccatgtcatgacaaatcttggtgagaagctaactgatgaggaggtggatgagatga 465
Query: 586 tccgtgaggctgatgtcgatggtg 609
|||||||||||||||| |||||||
Sbjct: 466 tccgtgaggctgatgtggatggtg 489
>gb|BE366319.1|BE366319 PI1_32_A10.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 446
Score = 700 bits (353), Expect = 0.0
Identities = 421/443 (95%), Gaps = 3/443 (0%)
Strand = Plus / Plus
Query: 166 gcttccagctccgatcgatctgatccctccccaccaccgctcccatggcggaccaactca 225
|||||| ||||||||||||||||| || |||||||||| |||||||||||||| ||||
Sbjct: 7 gcttcccgctccgatcgatctgat---tcgccaccaccgcgcccatggcggaccagctca 63
Query: 226 ccgacgaccagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatg 285
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 64 ccgacgaccagatcgctgagttcaaggaggccttcagcctattcgacaaggacggggatg 123
Query: 286 gttgcatcacgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacag 345
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 124 gttgcatcacgaccaaggagctgggaactgtcatgcgttcactagggcaaaaccctacag 183
Query: 346 aggctgagctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgatt 405
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 184 aggctgagctccaggacatgatcaatgaggtcgatgctgatggcaacggcaccattgatt 243
Query: 406 ttccagagtttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagc 465
||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 244 ttccagagtttctcaacctcatggctcgcaagatgaaggacacggactctgaggaagagc 303
Query: 466 tcaaggaggcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagc 525
||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 304 tcaaggaggccttccgtgtgtttgacaaggaccagaacggcttcatctctgctgccgagc 363
Query: 526 tccgccatgtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatga 585
||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||
Sbjct: 364 tccgccatgtcatgacaaatcttggtgagaagctaactgatgaggaggtggatgagatga 423
Query: 586 tccgtgaggctgatgtcgatggt 608
|||||||||||||||| ||||||
Sbjct: 424 tccgtgaggctgatgtggatggt 446
>gb|BG241809.1|BG241809 RHIZ2_51_A07.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 479
Score = 686 bits (346), Expect = 0.0
Identities = 408/428 (95%), Gaps = 3/428 (0%)
Strand = Plus / Plus
Query: 166 gcttccagctccgatcgatctgatccctccccaccaccgctcccatggcggaccaactca 225
|||||| ||||||||||||||||| ||||||||||||| |||||||||||||| ||||
Sbjct: 55 gcttcccgctccgatcgatctgat---tccccaccaccgcgcccatggcggaccagctca 111
Query: 226 ccgacgaccagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatg 285
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 112 ccgacgaccagatcgctgagttcaaggaggccttcagcctattcgacaaggacggggatg 171
Query: 286 gttgcatcacgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacag 345
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 172 gttgcatcacgaccaaggagctgggaactgtcatgcgttcactagggcaaaaccctacag 231
Query: 346 aggctgagctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgatt 405
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 232 aggctgagctccaggacatgatcaatgaggtcgatgctgatggcaacggcaccattgatt 291
Query: 406 ttccagagtttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagc 465
||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 292 ttccagagtttctcaacctcatggctcgcaagatgaaggacacggactctgaggaagagc 351
Query: 466 tcaaggaggcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagc 525
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 352 tcaaggaggcctttcgtgtgtttgacaaggaccagaacggcttcatctctgctgccgagc 411
Query: 526 tccgccatgtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatga 585
|||| |||||||||||||||||||| ||||||||||||||||||||||| || |||||||
Sbjct: 412 tccggcatgtcatgacaaatcttggtgagaagctaactgatgaggaggtggatgagatga 471
Query: 586 tccgtgag 593
||||||||
Sbjct: 472 tccgtgag 479
>gb|BG273320.1|BG273320 OV2_25_H09.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 526
Score = 676 bits (341), Expect = 0.0
Identities = 463/503 (92%), Gaps = 8/503 (1%)
Strand = Plus / Plus
Query: 340 ctacagaggctgagctccaggacatgatcaatgaggtcgatgccgatggcaacggcacca 399
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1 ctacagaggctgagctccaggacatgatcaatgaggtcgatgctgatggcaacggcacca 60
Query: 400 tcgattttccagagtttctgaaccttatggctcgcaagatgaaggacaccgactctgagg 459
| ||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 61 ttgattttccagagtttctcaacctcatggctcgcaagatgaaggacacggactctgagg 120
Query: 460 aagagctcaaggaggcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccg 519
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |
Sbjct: 121 aagagctcaaggaggccttccgtgtgtttgacaaggaccagaacggcttcatctctgctg 180
Query: 520 ccgagctccgccatgtcatgacaaatcttggggagaagctaactgatgaggaggtagacg 579
||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |
Sbjct: 181 ccgagctccgccatgtcatgacaaatcttggtgagaagctaactgatgaggaggtggatg 240
Query: 580 agatgatccgtgaggctgatgtcgatggtgatggccagattaactacgaggagtttgtta 639
|||||||||||||||||||||| ||||||||||| ||||| ||||| ||||||||||| |
Sbjct: 241 agatgatccgtgaggctgatgtggatggtgatggtcagatcaactatgaggagtttgtca 300
Query: 640 aggtcatgatggccaagtgagccacaaaagcataagctcaaggcggagaggattgtgcac 699
| |||||||||||||||||||||||| || ||||| || |||||||||| ||||| |||
Sbjct: 301 aagtcatgatggccaagtgagccacagaaccataatctgaaggcggagaagattgggcat 360
Query: 700 tgcatattagtcaagatgcaatgcaactcttatttcatcgaat---tccagtgaaacatt 756
||||||||||||||| ||||||||||||||||||||| | ||||||||||||||
Sbjct: 361 tgcatattagtcaag-----atgcaactcttatttcatcgacttcctccagtgaaacatt 415
Query: 757 ctgctagttgtagtttttgaaaggcaatgcagttgctgctttgttcttccctccagtgtg 816
||||||||||||||| |||||||| ||| |||| |||||||||||||||||||||||||
Sbjct: 416 ctgctagttgtagttgctgaaaggcgatgtagttcctgctttgttcttccctccagtgtg 475
Query: 817 ttttcagaactgttgattcatgt 839
||||||||| ||||| |||||||
Sbjct: 476 ttttcagaaatgttgtttcatgt 498
>gb|BE595909.1|BE595909 PI1_49_G10.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 507
Score = 670 bits (338), Expect = 0.0
Identities = 466/508 (91%), Gaps = 8/508 (1%)
Strand = Plus / Plus
Query: 357 caggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagagttt 416
|||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 1 caggacatgatcaatgaggtcgatgctgatggcaacggcaccattgattttccagagttt 60
Query: 417 ctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggaggcc 476
|| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 61 ctcaacctcatggctcgcaagatgaaggacacggactctgaggaagagctcaaggaggcc 120
Query: 477 tttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccatgtc 536
|| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 121 ttccgtgtgtttgacaaggaccagaacggcttcatctctgctgccgagctccgccatgtc 180
Query: 537 atgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgaggct 596
|||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 181 atgacaaatcttggtgagaagctaactgatgaggaggtggatgagatgatccgtgaggct 240
Query: 597 gatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggccaag 656
||||| ||||||||||| ||||| ||||| ||||||||||| || |||||||||||||||
Sbjct: 241 gatgtggatggtgatggtcagatcaactatgaggagtttgtcaaagtcatgatggccaag 300
Query: 657 tgagccacaaaagcataagctcaaggcggagaggattgtgcactgcatattagtcaagat 716
||||||||| || ||||| || |||||||||| ||||| ||| |||||||||||||||
Sbjct: 301 tgagccacagaaccataatctgaaggcggagaagattgggcattgcatattagtcaag-- 358
Query: 717 gcaatgcaactcttatttcatcgaat---tccagtgaaacattctgctagttgtagtttt 773
||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 359 ---atgcaactcttatttcatcgacttcctccagtgaaacattctgctagttgtagttgc 415
Query: 774 tgaaaggcaatgcagttgctgctttgttcttccctccagtgtgttttcagaactgttgat 833
|||||||| ||| |||| |||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 416 tgaaaggcgatgtagttcctgctttgttcttccctccagtgtgttttcagaaatgttgtt 475
Query: 834 tcatgtgaaactgtaatgattgccctcc 861
||||||||| |||||||||||||||||
Sbjct: 476 tcatgtgaacttgtaatgattgccctcc 503
>gb|BZ337970.1|BZ337970 ia92b08.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ia92b08 5', DNA sequence
Length = 595
Score = 660 bits (333), Expect = 0.0
Identities = 429/461 (93%), Gaps = 5/461 (1%)
Strand = Plus / Minus
Query: 285 ggttgcatcacgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctaca 344
|||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 466 ggttgcatcacggccaaggagctgggaactgtcatgcgttcactagggcaaaaccctaca 407
Query: 345 gaggctgagctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgat 404
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 406 gaggctgagctccaggacatgatcaatgaggtcgatgctgatggcaacggcaccattgat 347
Query: 405 tttccagagtttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagag 464
|||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 346 tttccagagtttctcaacctcatggctcgcaagatgaaggacacggactctgaggaagag 287
Query: 465 ctcaaggaggcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgag 524
|||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 286 ctcaaggaggccttccgtgtgtttgacaaggaccagaacggcttcatctctgctgccgag 227
Query: 525 ctccgccatgtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatg 584
|||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||
Sbjct: 226 ctccgccatgtcatgacaaatcttggtgagaagctaactgatgaggaggtggatgagatg 167
Query: 585 atccgtgaggctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtc 644
||||||||||||||||| ||||||||||| ||||| ||||| ||||||||||| || |||
Sbjct: 166 atccgtgaggctgatgtggatggtgatggtcagatcaactatgaggagtttgtcaaagtc 107
Query: 645 atgatggccaagtgagccacaaaagcataagctcaaggcggagaggattgtgcactgcat 704
||||||||||||||||||||| || ||||| || |||||||||| ||||| ||| |||||
Sbjct: 106 atgatggccaagtgagccacagaaccataatctgaaggcggagaagattgggcattgcat 47
Query: 705 attagtcaagatgcaatgcaactcttatttcatcgaattcc 745
|||||||||| ||||||||||||||||||||| ||||
Sbjct: 46 attagtcaag-----atgcaactcttatttcatcgacttcc 11
>gb|BE366332.1|BE366332 PI1_32_A10.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 484
Score = 656 bits (331), Expect = 0.0
Identities = 450/489 (92%), Gaps = 8/489 (1%)
Strand = Plus / Plus
Query: 310 gaactgtcatgcgttcactggggcaaaaccctacagaggctgagctccaggacatgatca 369
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaactgtcatgcgttcactagggcaaaaccctacagaggctgagctccaggacatgatca 60
Query: 370 atgaggtcgatgccgatggcaacggcaccatcgattttccagagtttctgaaccttatgg 429
||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| ||||
Sbjct: 61 atgaggtcgatgctgatggcaacggcaccattgattttccagagtttctcaacctcatgg 120
Query: 430 ctcgcaagatgaaggacaccgactctgaggaagagctcaaggaggcctttcgtgtgtttg 489
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 121 ctcgcaagatgaaggacacggactctgaggaagagctcaaggaggccttccgtgtgtttg 180
Query: 490 acaaggaccagaacggcttcatctccgccgccgagctccgccatgtcatgacaaatcttg 549
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 181 acaaggaccagaacggcttcatctctgctgccgagctccgccatgtcatgacaaatcttg 240
Query: 550 gggagaagctaactgatgaggaggtagacgagatgatccgtgaggctgatgtcgatggtg 609
| ||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||
Sbjct: 241 gtgagaagctaactgatgaggaggtggatgagatgatccgtgaggctgatgtggatggtg 300
Query: 610 atggccagattaactacgaggagtttgttaaggtcatgatggccaagtgagccacaaaag 669
|||| ||||| ||||| ||||||||||| || |||||||||||||||||||||||| ||
Sbjct: 301 atggtcagatcaactatgaggagtttgtcaaagtcatgatggccaagtgagccacagaac 360
Query: 670 cataagctcaaggcggagaggattgtgcactgcatattagtcaagatgcaatgcaactct 729
||||| || |||||||||| ||||| ||| ||||||||||||||| ||||||||||
Sbjct: 361 cataatctgaaggcggagaagattgggcattgcatattagtcaag-----atgcaactct 415
Query: 730 tatttcatcgaat---tccagtgaaacattctgctagttgtagtttttgaaaggcaatgc 786
||||||||||| | ||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 416 tatttcatcgacttcctccagtgaaacattctgctagttgtagttgctgaaaggcgatgt 475
Query: 787 agttgctgc 795
|||| ||||
Sbjct: 476 agttcctgc 484
>gb|BM328681.1|BM328681 PIC1_25_C07.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 537
Score = 624 bits (315), Expect = e-177
Identities = 452/497 (90%), Gaps = 8/497 (1%)
Strand = Plus / Plus
Query: 426 atggctcgcaagatgaaggacaccgactctgaggaagagctcaaggaggcctttcgtgtg 485
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 2 atggctcgcaagatgaaggacacggactctgaggaagagctcaaggaggccttccgtgtg 61
Query: 486 tttgacaaggaccagaacggcttcatctccgccgccgagctccgccatgtcatgacaaat 545
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 62 tttgacaaggaccagaacggcttcatctctgctgccgagctccgccatgtcatgacaaat 121
Query: 546 cttggggagaagctaactgatgaggaggtagacgagatgatccgtgaggctgatgtcgat 605
||||| ||||||||||||||||||||||| || ||||||||||||||||||||||| |||
Sbjct: 122 cttggtgagaagctaactgatgaggaggtggatgagatgatccgtgaggctgatgtggat 181
Query: 606 ggtgatggccagattaactacgaggagtttgttaaggtcatgatggccaagtgagccaca 665
|||||||| ||||| ||||| ||||||||||| || ||||||||||||||||||||||||
Sbjct: 182 ggtgatggtcagatcaactatgaggagtttgtcaaagtcatgatggccaagtgagccaca 241
Query: 666 aaagcataagctcaaggcggagaggattgtgcactgcatattagtcaagatgcaatgcaa 725
|| ||||| || |||||||||| ||||| ||| ||||||||||||||| ||||||
Sbjct: 242 gaaccataatctgaaggcggagaagattgggcattgcatattagtcaag-----atgcaa 296
Query: 726 ctcttatttcatcgaat---tccagtgaaacattctgctagttgtagtttttgaaaggca 782
||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||
Sbjct: 297 ctcttatttcatcgacttcctccagtgaaacattctgctagttgtagttgctgaaaggcg 356
Query: 783 atgcagttgctgctttgttcttccctccagtgtgttttcagaactgttgattcatgtgaa 842
||| |||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 357 atgtagttcctgctttgttcttccctccagtgtgttttcagaaatgttgtttcatgtgaa 416
Query: 843 actgtaatgattgccctccctgctgtgtcttggttgcagttgaaaccatatgtagctaca 902
||||||||||||||||| |||||||||||| |||||||||||||||||||||| || |
Sbjct: 417 cttgtaatgattgccctccttgctgtgtcttgattgcagttgaaaccatatgtagttata 476
Query: 903 ttccccctcccaccacc 919
||| || || |||||||
Sbjct: 477 ttctccgtcacaccacc 493
>gb|CW247926.1|CW247926 104_709_11222021_148_35025_029 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11222021, DNA
sequence
Length = 722
Score = 605 bits (305), Expect = e-171
Identities = 359/377 (95%)
Strand = Plus / Plus
Query: 285 ggttgcatcacgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctaca 344
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 346 ggttgcatcacgaccaaggagctgggaactgtcatgcgttcactagggcaaaaccctaca 405
Query: 345 gaggctgagctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgat 404
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 406 gaggctgagctccaggacatgatcaatgaggtcgatgctgatggcaacggcaccattgat 465
Query: 405 tttccagagtttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagag 464
|||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 466 tttccagagtttctcaacctcatggctcgcaagatgaaggacacggactctgaggaagag 525
Query: 465 ctcaaggaggcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgag 524
|||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 526 ctcaaggaggccttccgtgtgtttgacaaggaccagaacggcttcatctctgctgccgag 585
Query: 525 ctccgccatgtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatg 584
|||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||
Sbjct: 586 ctccgccatgtcatgacaaatcttggtgagaagctaactgatgaggaggtggatgagatg 645
Query: 585 atccgtgaggctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtc 644
||||||||||||||||| ||||||||||| ||||| ||||| ||||||||||| || |||
Sbjct: 646 atccgtgaggctgatgtggatggtgatggtcagatcaactatgaggagtttgtcaaagtc 705
Query: 645 atgatggccaagtgagc 661
|||||||||||||||||
Sbjct: 706 atgatggccaagtgagc 722
>gb|BE357649.1|BE357649 DG1_21_C12.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 391
Score = 585 bits (295), Expect = e-165
Identities = 364/387 (94%)
Strand = Plus / Plus
Query: 288 tgcatcacgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagag 347
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 tgcatcacgaccaaggagctgggaactgtcatgcgttcactagggcaaaaccctacagag 60
Query: 348 gctgagctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgatttt 407
| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 61 ggtgagctccaggacatgatcaatgaggtcgatgctgatggcaacggcaccattgatttt 120
Query: 408 ccagagtttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctc 467
||||||||||| ||| | ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 121 ccagagtttctcaacgtcatggctcgcaagatgaaggacacggactctgaggaagagctc 180
Query: 468 aaggaggcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctc 527
||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 181 aaggaggccttccgtgtgtttgacaaggaccagaacggcttcatctctgctgccgagctc 240
Query: 528 cgccatgtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatc 587
||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||
Sbjct: 241 cgccatgtcatgacaaatcttggtgagaagctaactgatgaggaggtggatgagatgatc 300
Query: 588 cgtgaggctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatg 647
|||||||||||||| ||||||||||| ||||| ||||| ||||||||||| | ||||||
Sbjct: 301 cgtgaggctgatgtggatggtgatggtcagatcaactatgaggagtttgtcagagtcatg 360
Query: 648 atggccaagtgagccacaaaagcataa 674
|||||||||||||||||| || |||||
Sbjct: 361 atggccaagtgagccacagaaccataa 387
>gb|BF586565.1|BF586565 FM1_29_G11.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 706
Score = 565 bits (285), Expect = e-159
Identities = 411/453 (90%)
Strand = Plus / Plus
Query: 208 ccatggcggaccaactcaccgacgaccagatcgccgagttcaaggaggccttcagcctct 267
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35 ccatggcggaccagctcaccgacgaccagatcgccgagttcaaggaggccttcagcctct 94
Query: 268 tcgacaaggacggggatggttgcatcacgaccaaggagctgggaactgtcatgcgttcac 327
||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 95 tcgacaaggacggcgatggttgcatcacaaccaaggagcttggaactgtcatgcgttcac 154
Query: 328 tggggcaaaaccctacagaggctgagctccaggacatgatcaatgaggtcgatgccgatg 387
|||| |||||||| || ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 155 tgggtcaaaacccaaccgaggctgagcttcaggacatgatcaatgaggtcgatgccgatg 214
Query: 388 gcaacggcaccatcgattttccagagtttctgaaccttatggctcgcaagatgaaggaca 447
|||| |||||||| || ||||| ||||| || ||||| ||||| ||||||||||||||||
Sbjct: 215 gcaatggcaccattgactttcctgagttcctcaacctcatggcccgcaagatgaaggaca 274
Query: 448 ccgactctgaggaagagctcaaggaggcctttcgtgtgtttgacaaggaccagaacggct 507
||||||| ||||| |||||||||||||| || | ||||| |||||||||||||||||||
Sbjct: 275 ccgactccgaggaggagctcaaggaggcgttcagggtgttcgacaaggaccagaacggct 334
Query: 508 tcatctccgccgccgagctccgccatgtcatgacaaatcttggggagaagctaactgatg 567
||||||| || || ||||||||||| || ||||| || ||||| |||||||| || ||||
Sbjct: 335 tcatctctgctgcggagctccgccacgtgatgaccaaccttggcgagaagctgaccgatg 394
Query: 568 aggaggtagacgagatgatccgtgaggctgatgtcgatggtgatggccagattaactacg 627
||||||| || ||||||||||| |||||||| |||||||| ||||||||||| |||||||
Sbjct: 395 aggaggtcgatgagatgatccgcgaggctgacgtcgatggcgatggccagatcaactacg 454
Query: 628 aggagtttgttaaggtcatgatggccaagtgag 660
||||||| || ||||| ||||||||||||||||
Sbjct: 455 aggagttcgtgaaggtgatgatggccaagtgag 487
>gb|BF586645.1|BF586645 FM1_29_G11.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 608
Score = 565 bits (285), Expect = e-159
Identities = 411/453 (90%)
Strand = Plus / Plus
Query: 208 ccatggcggaccaactcaccgacgaccagatcgccgagttcaaggaggccttcagcctct 267
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ccatggcggaccagctcaccgacgaccagatcgccgagttcaaggaggccttcagcctct 181
Query: 268 tcgacaaggacggggatggttgcatcacgaccaaggagctgggaactgtcatgcgttcac 327
||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 182 tcgacaaggacggcgatggttgcatcacaaccaaggagcttggaactgtcatgcgttcac 241
Query: 328 tggggcaaaaccctacagaggctgagctccaggacatgatcaatgaggtcgatgccgatg 387
|||| |||||||| || ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 242 tgggtcaaaacccaaccgaggctgagcttcaggacatgatcaatgaggtcgatgccgatg 301
Query: 388 gcaacggcaccatcgattttccagagtttctgaaccttatggctcgcaagatgaaggaca 447
|||| |||||||| || ||||| ||||| || ||||| ||||| ||||||||||||||||
Sbjct: 302 gcaatggcaccattgactttcctgagttcctcaacctcatggcccgcaagatgaaggaca 361
Query: 448 ccgactctgaggaagagctcaaggaggcctttcgtgtgtttgacaaggaccagaacggct 507
||||||| ||||| |||||||||||||| || | ||||| |||||||||||||||||||
Sbjct: 362 ccgactccgaggaggagctcaaggaggcgttcagggtgttcgacaaggaccagaacggct 421
Query: 508 tcatctccgccgccgagctccgccatgtcatgacaaatcttggggagaagctaactgatg 567
||||||| || || ||||||||||| || ||||| || ||||| |||||||| || ||||
Sbjct: 422 tcatctctgctgcggagctccgccacgtgatgaccaaccttggcgagaagctgaccgatg 481
Query: 568 aggaggtagacgagatgatccgtgaggctgatgtcgatggtgatggccagattaactacg 627
||||||| || ||||||||||| |||||||| |||||||| ||||||||||| |||||||
Sbjct: 482 aggaggtcgatgagatgatccgcgaggctgacgtcgatggcgatggccagatcaactacg 541
Query: 628 aggagtttgttaaggtcatgatggccaagtgag 660
||||||| || ||||| ||||||||||||||||
Sbjct: 542 aggagttcgtgaaggtgatgatggccaagtgag 574
>gb|BM325507.1|BM325507 PIC1_45_D08.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 638
Score = 565 bits (285), Expect = e-159
Identities = 411/453 (90%)
Strand = Plus / Plus
Query: 208 ccatggcggaccaactcaccgacgaccagatcgccgagttcaaggaggccttcagcctct 267
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ccatggcggaccagctcaccgacgaccagatcgccgagttcaaggaggccttcagcctct 121
Query: 268 tcgacaaggacggggatggttgcatcacgaccaaggagctgggaactgtcatgcgttcac 327
||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 122 tcgacaaggacggcgatggttgcatcacaaccaaggagcttggaactgtcatgcgttcac 181
Query: 328 tggggcaaaaccctacagaggctgagctccaggacatgatcaatgaggtcgatgccgatg 387
|||| |||||||| || ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 182 tgggtcaaaacccaaccgaggctgagcttcaggacatgatcaatgaggtcgatgccgatg 241
Query: 388 gcaacggcaccatcgattttccagagtttctgaaccttatggctcgcaagatgaaggaca 447
|||| |||||||| || ||||| ||||| || ||||| ||||| ||||||||||||||||
Sbjct: 242 gcaatggcaccattgactttcctgagttcctcaacctcatggcccgcaagatgaaggaca 301
Query: 448 ccgactctgaggaagagctcaaggaggcctttcgtgtgtttgacaaggaccagaacggct 507
||||||| ||||| |||||||||||||| || | ||||| |||||||||||||||||||
Sbjct: 302 ccgactccgaggaggagctcaaggaggcgttcagggtgttcgacaaggaccagaacggct 361
Query: 508 tcatctccgccgccgagctccgccatgtcatgacaaatcttggggagaagctaactgatg 567
||||||| || || |||||||||||||| ||||| || ||||| |||||||| || || |
Sbjct: 362 tcatctctgcagcggagctccgccatgtgatgaccaaccttggcgagaagctgaccgacg 421
Query: 568 aggaggtagacgagatgatccgtgaggctgatgtcgatggtgatggccagattaactacg 627
||||||| || ||||||||||| |||||||| |||||||| ||||||||||| |||||||
Sbjct: 422 aggaggtcgatgagatgatccgcgaggctgacgtcgatggcgatggccagatcaactacg 481
Query: 628 aggagtttgttaaggtcatgatggccaagtgag 660
||||||| || ||||| ||||||||||||||||
Sbjct: 482 aggagttcgtgaaggtgatgatggccaagtgag 514
>gb|CN125410.1|CN125410 RHOH1_10_H09.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_10_H09_A002 5', mRNA sequence
Length = 834
Score = 565 bits (285), Expect = e-159
Identities = 411/453 (90%)
Strand = Plus / Plus
Query: 208 ccatggcggaccaactcaccgacgaccagatcgccgagttcaaggaggccttcagcctct 267
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 ccatggcggaccagctcaccgacgaccagatcgccgagttcaaggaggccttcagcctct 200
Query: 268 tcgacaaggacggggatggttgcatcacgaccaaggagctgggaactgtcatgcgttcac 327
||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 201 tcgacaaggacggcgatggttgcatcacaaccaaggagcttggaactgtcatgcgttcac 260
Query: 328 tggggcaaaaccctacagaggctgagctccaggacatgatcaatgaggtcgatgccgatg 387
|||| |||||||| || ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 tgggtcaaaacccaaccgaggctgagcttcaggacatgatcaatgaggtcgatgccgatg 320
Query: 388 gcaacggcaccatcgattttccagagtttctgaaccttatggctcgcaagatgaaggaca 447
|||| |||||||| || ||||| ||||| || ||||| ||||| ||||||||||||||||
Sbjct: 321 gcaatggcaccattgactttcctgagttcctcaacctcatggcccgcaagatgaaggaca 380
Query: 448 ccgactctgaggaagagctcaaggaggcctttcgtgtgtttgacaaggaccagaacggct 507
||||||| ||||| |||||||||||||| || | ||||| |||||||||||||||||||
Sbjct: 381 ccgactccgaggaggagctcaaggaggcgttcagggtgttcgacaaggaccagaacggct 440
Query: 508 tcatctccgccgccgagctccgccatgtcatgacaaatcttggggagaagctaactgatg 567
||||||| || || |||||||||||||| ||||| || ||||| |||||||| || || |
Sbjct: 441 tcatctctgcagcggagctccgccatgtgatgaccaaccttggcgagaagctgaccgacg 500
Query: 568 aggaggtagacgagatgatccgtgaggctgatgtcgatggtgatggccagattaactacg 627
||||||| || ||||||||||| |||||||| |||||||| ||||||||||| |||||||
Sbjct: 501 aggaggtcgatgagatgatccgcgaggctgacgtcgatggcgatggccagatcaactacg 560
Query: 628 aggagtttgttaaggtcatgatggccaagtgag 660
||||||| || ||||| ||||||||||||||||
Sbjct: 561 aggagttcgtgaaggtgatgatggccaagtgag 593
>gb|AW565189.1|AW565189 LG1_328_B09.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 573
Score = 559 bits (282), Expect = e-157
Identities = 408/450 (90%)
Strand = Plus / Plus
Query: 208 ccatggcggaccaactcaccgacgaccagatcgccgagttcaaggaggccttcagcctct 267
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ccatggcggaccagctcaccgacgaccagatcgccgagttcaaggaggccttcagcctct 183
Query: 268 tcgacaaggacggggatggttgcatcacgaccaaggagctgggaactgtcatgcgttcac 327
||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 184 tcgacaaggacggcgatggttgcatcacaaccaaggagcttggaactgtcatgcgttcac 243
Query: 328 tggggcaaaaccctacagaggctgagctccaggacatgatcaatgaggtcgatgccgatg 387
|||| |||||||| || ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 244 tgggtcaaaacccaaccgaggctgagcttcaggacatgatcaatgaggtcgatgccgatg 303
Query: 388 gcaacggcaccatcgattttccagagtttctgaaccttatggctcgcaagatgaaggaca 447
|||| |||||||| || ||||| ||||| || ||||| ||||| ||||||||||||||||
Sbjct: 304 gcaatggcaccattgactttcctgagttcctcaacctcatggcccgcaagatgaaggaca 363
Query: 448 ccgactctgaggaagagctcaaggaggcctttcgtgtgtttgacaaggaccagaacggct 507
||||||| ||||| |||||||||||||| || | ||||| |||||||||||||||||||
Sbjct: 364 ccgactccgaggaggagctcaaggaggcgttcagggtgttcgacaaggaccagaacggct 423
Query: 508 tcatctccgccgccgagctccgccatgtcatgacaaatcttggggagaagctaactgatg 567
||||||| || || |||||||||||||| ||||| || ||||| |||||||| || || |
Sbjct: 424 tcatctctgcagcggagctccgccatgtgatgaccaaccttggcgagaagctgaccgacg 483
Query: 568 aggaggtagacgagatgatccgtgaggctgatgtcgatggtgatggccagattaactacg 627
||||||| || ||||||||||| |||||||| |||||||| ||||||||||| |||||||
Sbjct: 484 aggaggtcgatgagatgatccgcgaggctgacgtcgatggcgatggccagatcaactacg 543
Query: 628 aggagtttgttaaggtcatgatggccaagt 657
||||||| || ||||| |||||||||||||
Sbjct: 544 aggagttcgtgaaggtgatgatggccaagt 573
>gb|CF482521.1|CF482521 POL1_7_A12.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_7_A12_A002 5', mRNA sequence
Length = 689
Score = 557 bits (281), Expect = e-157
Identities = 410/453 (90%)
Strand = Plus / Plus
Query: 208 ccatggcggaccaactcaccgacgaccagatcgccgagttcaaggaggccttcagcctct 267
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 ccatggcggaccagctcaccgacgaccagatcgccgagttcaaggaggccttcagcctct 173
Query: 268 tcgacaaggacggggatggttgcatcacgaccaaggagctgggaactgtcatgcgttcac 327
||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 174 tcgacaaggacggcgatggttgcatcacaaccaaggagcttggaactgtcatgcgttcac 233
Query: 328 tggggcaaaaccctacagaggctgagctccaggacatgatcaatgaggtcgatgccgatg 387
|||| |||||||| || ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 234 tgggtcaaaacccaaccgaggctgagcttcaggacatgatcaatgaggtcgatgccgatg 293
Query: 388 gcaacggcaccatcgattttccagagtttctgaaccttatggctcgcaagatgaaggaca 447
|||| |||||||| || ||||| ||||| || ||||| ||||| ||||||||||||||||
Sbjct: 294 gcaatggcaccattgactttcctgagttcctcaacctcatggcccgcaagatgaaggaca 353
Query: 448 ccgactctgaggaagagctcaaggaggcctttcgtgtgtttgacaaggaccagaacggct 507
||||||| ||||| |||||||||||||| || | ||||| |||||||||||||||||||
Sbjct: 354 ccgactccgaggaggagctcaaggaggcgttcagggtgttcgacaaggaccagaacggct 413
Query: 508 tcatctccgccgccgagctccgccatgtcatgacaaatcttggggagaagctaactgatg 567
||||||| || || |||||||||||||| ||||| || ||||| |||| ||| || || |
Sbjct: 414 tcatctctgcagcggagctccgccatgtgatgaccaaccttggcgagaggctgaccgacg 473
Query: 568 aggaggtagacgagatgatccgtgaggctgatgtcgatggtgatggccagattaactacg 627
||||||| || ||||||||||| |||||||| |||||||| ||||||||||| |||||||
Sbjct: 474 aggaggtcgatgagatgatccgcgaggctgacgtcgatggcgatggccagatcaactacg 533
Query: 628 aggagtttgttaaggtcatgatggccaagtgag 660
||||||| || ||||| ||||||||||||||||
Sbjct: 534 aggagttcgtgaaggtgatgatggccaagtgag 566
>gb|AW284040.1|AW284040 LG1_267_A09.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 428
Score = 529 bits (267), Expect = e-148
Identities = 392/433 (90%), Gaps = 8/433 (1%)
Strand = Plus / Plus
Query: 482 tgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccatgtcatgac 541
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 1 tgtgtttgacaaggaccagaacggcttcatctctgctgccgagctccgccatgtcatgac 60
Query: 542 aaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgaggctgatgt 601
||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 61 aaatcttggtgagaagctaactgatgaggaggtggatgagatgatccgtgaggctgatgt 120
Query: 602 cgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggccaagtgagc 661
||||||||||| ||||| ||||| ||||||||||| || ||||||||||||||||||||
Sbjct: 121 ggatggtgatggtcagatcaactatgaggagtttgtcaaagtcatgatggccaagtgagc 180
Query: 662 cacaaaagcataagctcaaggcggagaggattgtgcactgcatattagtcaagatgcaat 721
|||| || ||||| || |||||||||| ||||| ||| ||||||||||||||| ||
Sbjct: 181 cacagaaccataatctgaaggcggagaagattgggcattgcatattagtcaag-----at 235
Query: 722 gcaactcttatttcatcgaat---tccagtgaaacattctgctagttgtagtttttgaaa 778
||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||
Sbjct: 236 gcaactcttatttcatcgacttcctccagtgaaacattctgctagttgtagttgctgaaa 295
Query: 779 ggcaatgcagttgctgctttgttcttccctccagtgtgttttcagaactgttgattcatg 838
||| ||| |||| |||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 296 ggcgatgtagttcctgctttgttcttccctccagtgtgttttcagaaatgttgtttcatg 355
Query: 839 tgaaactgtaatgattgccctccctgctgtgtcttggttgcagttgaaaccatatgtagc 898
|||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 356 tgaacttgtaatgattgccctccttgctgtgtcttgattgcagttgaaaccatatgtagt 415
Query: 899 tacattccccctc 911
|| |||| |||||
Sbjct: 416 tatattctccctc 428
>gb|AW284041.1|AW284041 LG1_267_A10.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 428
Score = 529 bits (267), Expect = e-148
Identities = 392/433 (90%), Gaps = 8/433 (1%)
Strand = Plus / Plus
Query: 482 tgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccatgtcatgac 541
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 1 tgtgtttgacaaggaccagaacggcttcatctctgctgccgagctccgccatgtcatgac 60
Query: 542 aaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgaggctgatgt 601
||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 61 aaatcttggtgagaagctaactgatgaggaggtggatgagatgatccgtgaggctgatgt 120
Query: 602 cgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggccaagtgagc 661
||||||||||| ||||| ||||| ||||||||||| || ||||||||||||||||||||
Sbjct: 121 ggatggtgatggtcagatcaactatgaggagtttgtcaaagtcatgatggccaagtgagc 180
Query: 662 cacaaaagcataagctcaaggcggagaggattgtgcactgcatattagtcaagatgcaat 721
|||| || ||||| || |||||||||| ||||| ||| ||||||||||||||| ||
Sbjct: 181 cacagaaccataatctgaaggcggagaagattgggcattgcatattagtcaag-----at 235
Query: 722 gcaactcttatttcatcgaat---tccagtgaaacattctgctagttgtagtttttgaaa 778
||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||
Sbjct: 236 gcaactcttatttcatcgacttcctccagtgaaacattctgctagttgtagttgctgaaa 295
Query: 779 ggcaatgcagttgctgctttgttcttccctccagtgtgttttcagaactgttgattcatg 838
||| ||| |||| |||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 296 ggcgatgtagttcctgctttgttcttccctccagtgtgttttcagaaatgttgtttcatg 355
Query: 839 tgaaactgtaatgattgccctccctgctgtgtcttggttgcagttgaaaccatatgtagc 898
|||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 356 tgaacttgtaatgattgccctccttgctgtgtcttgattgcagttgaaaccatatgtagt 415
Query: 899 tacattccccctc 911
|| |||| |||||
Sbjct: 416 tatattctccctc 428
>gb|AW676975.1|AW676975 DG1_3_G12.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 421
Score = 525 bits (265), Expect = e-147
Identities = 382/421 (90%)
Strand = Plus / Plus
Query: 212 ggcggaccaactcaccgacgaccagatcgccgagttcaaggaggccttcagcctcttcga 271
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggcggaccagctcaccgacgaccagatcgccgagttcaaggaggccttcagcctcttcga 60
Query: 272 caaggacggggatggttgcatcacgaccaaggagctgggaactgtcatgcgttcactggg 331
||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 61 caaggacggcgatggttgcatcacaaccaaggagcttggaactgtcatgcgttcactggg 120
Query: 332 gcaaaaccctacagaggctgagctccaggacatgatcaatgaggtcgatgccgatggcaa 391
|||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 121 tcaaaacccaaccgaggctgagcttcaggacatgatcaatgaggtcgatgccgatggcaa 180
Query: 392 cggcaccatcgattttccagagtttctgaaccttatggctcgcaagatgaaggacaccga 451
|||||||| || ||||| ||||| || ||||| ||||| ||||||||||||||||||||
Sbjct: 181 tggcaccattgactttcctgagttcctcaacctcatggcccgcaagatgaaggacaccga 240
Query: 452 ctctgaggaagagctcaaggaggcctttcgtgtgtttgacaaggaccagaacggcttcat 511
||| ||||| |||||||||||||| || | ||||| |||||||||||||||||||||||
Sbjct: 241 ctccgaggaggagctcaaggaggcgttcagggtgttcgacaaggaccagaacggcttcat 300
Query: 512 ctccgccgccgagctccgccatgtcatgacaaatcttggggagaagctaactgatgagga 571
||| || || |||||||||||||| ||||| || ||||| |||||||| || || |||||
Sbjct: 301 ctctgcagcggagctccgccatgtgatgaccaaccttggcgagaagctgaccgacgagga 360
Query: 572 ggtagacgagatgatccgtgaggctgatgtcgatggtgatggccagattaactacgagga 631
||| || ||||||||||| |||||||| |||||||| ||||||||||| |||||||||||
Sbjct: 361 ggtcgatgagatgatccgcgaggctgacgtcgatggcgatggccagatcaactacgagga 420
Query: 632 g 632
|
Sbjct: 421 g 421
>gb|BE357880.1|BE357880 DG1_23_A05.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 545
Score = 515 bits (260), Expect = e-144
Identities = 374/412 (90%)
Strand = Plus / Plus
Query: 208 ccatggcggaccaactcaccgacgaccagatcgccgagttcaaggaggccttcagcctct 267
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 ccatggcggaccagctcaccgacgaccagatcgccgagttcaaggaggccttcagcctct 191
Query: 268 tcgacaaggacggggatggttgcatcacgaccaaggagctgggaactgtcatgcgttcac 327
||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 192 tcgacaaggacggcgatggttgcatcacaaccaaggagcttggaactgtcatgcgttcac 251
Query: 328 tggggcaaaaccctacagaggctgagctccaggacatgatcaatgaggtcgatgccgatg 387
|||| |||||||| || ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 252 tgggtcaaaacccaaccgaggctgagcttcaggacatgatcaatgaggtcgatgccgatg 311
Query: 388 gcaacggcaccatcgattttccagagtttctgaaccttatggctcgcaagatgaaggaca 447
|||| |||||||| || ||||| ||||| || ||||| ||||| ||||||||||||||||
Sbjct: 312 gcaatggcaccattgactttcctgagttcctcaacctcatggcccgcaagatgaaggaca 371
Query: 448 ccgactctgaggaagagctcaaggaggcctttcgtgtgtttgacaaggaccagaacggct 507
||||||| ||||| |||||||||||||| || | ||||| |||||||||||||||||||
Sbjct: 372 ccgactccgaggaggagctcaaggaggcgttcagggtgttcgacaaggaccagaacggct 431
Query: 508 tcatctccgccgccgagctccgccatgtcatgacaaatcttggggagaagctaactgatg 567
||||||| || || |||||||||||||| ||||| || ||||| |||||||| || || |
Sbjct: 432 tcatctctgcagcggagctccgccatgtgatgaccaaccttggcgagaagctgaccgacg 491
Query: 568 aggaggtagacgagatgatccgtgaggctgatgtcgatggtgatggccagat 619
||||||| || ||||||||||| |||||||| |||||||| |||||||||||
Sbjct: 492 aggaggtcgatgagatgatccgcgaggctgacgtcgatggcgatggccagat 543
>gb|BE357259.1|BE357259 DG1_148_F01.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 634
Score = 509 bits (257), Expect = e-142
Identities = 404/453 (89%)
Strand = Plus / Plus
Query: 208 ccatggcggaccaactcaccgacgaccagatcgccgagttcaaggaggccttcagcctct 267
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 ccatggcggaccagctcaccgacgaccagatcgccgagttcaaggaggccttcagcctct 128
Query: 268 tcgacaaggacggggatggttgcatcacgaccaaggagctgggaactgtcatgcgttcac 327
||||||||||||| || || |||||||| ||||||||||| |||||||| ||||| |||
Sbjct: 129 tcgacaaggacggcgacggctgcatcaccaccaaggagcttggaactgtgatgcgctcat 188
Query: 328 tggggcaaaaccctacagaggctgagctccaggacatgatcaatgaggtcgatgccgatg 387
||||||| |||||||| ||||||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 189 tggggcagaaccctactgaggctgagcttcaggacatgatcaatgaggttgatgctgatg 248
Query: 388 gcaacggcaccatcgattttccagagtttctgaaccttatggctcgcaagatgaaggaca 447
|||| || |||||||| ||||| |||||||| ||||| ||||| ||||||||||||||||
Sbjct: 249 gcaatggaaccatcgactttcctgagtttctcaacctgatggcacgcaagatgaaggaca 308
Query: 448 ccgactctgaggaagagctcaaggaggcctttcgtgtgtttgacaaggaccagaacggct 507
| ||||||||||| ||||||||||||||||| || ||||| |||||||||||||| ||||
Sbjct: 309 ctgactctgaggaggagctcaaggaggccttccgcgtgttcgacaaggaccagaatggct 368
Query: 508 tcatctccgccgccgagctccgccatgtcatgacaaatcttggggagaagctaactgatg 567
||||||| || || ||||| |||||||||||||| || || || |||||||| || || |
Sbjct: 369 tcatctctgctgctgagcttcgccatgtcatgaccaacctaggtgagaagctgacggacg 428
Query: 568 aggaggtagacgagatgatccgtgaggctgatgtcgatggtgatggccagattaactacg 627
||||||| ||||||||||||||||| || || || || ||||| |||||||| |||||||
Sbjct: 429 aggaggtggacgagatgatccgtgaagccgacgtggacggtgacggccagatcaactacg 488
Query: 628 aggagtttgttaaggtcatgatggccaagtgag 660
||||||| || ||||| ||||||||||||||||
Sbjct: 489 aggagttcgtgaaggtgatgatggccaagtgag 521
>gb|BE593412.1|BE593412 WS1_97_E06.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 479
Score = 509 bits (257), Expect = e-142
Identities = 371/409 (90%)
Strand = Plus / Plus
Query: 208 ccatggcggaccaactcaccgacgaccagatcgccgagttcaaggaggccttcagcctct 267
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 ccatggcggaccagctcaccgacgaccagatcgccgagttcaaggaggccttcagcctct 130
Query: 268 tcgacaaggacggggatggttgcatcacgaccaaggagctgggaactgtcatgcgttcac 327
||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 131 tcgacaaggacggcgatggttgcatcacaaccaaggagcttggaactgtcatgcgttcac 190
Query: 328 tggggcaaaaccctacagaggctgagctccaggacatgatcaatgaggtcgatgccgatg 387
|||| |||||||| || ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 191 tgggtcaaaacccaaccgaggctgagcttcaggacatgatcaatgaggtcgatgccgatg 250
Query: 388 gcaacggcaccatcgattttccagagtttctgaaccttatggctcgcaagatgaaggaca 447
|||| |||||||| || ||||| ||||| || ||||| ||||| ||||||||||||||||
Sbjct: 251 gcaatggcaccattgactttcctgagttcctcaacctcatggcccgcaagatgaaggaca 310
Query: 448 ccgactctgaggaagagctcaaggaggcctttcgtgtgtttgacaaggaccagaacggct 507
||||||| ||||| |||||||||||||| || | ||||| |||||||||||||||||||
Sbjct: 311 ccgactccgaggaggagctcaaggaggcgttcagggtgttcgacaaggaccagaacggct 370
Query: 508 tcatctccgccgccgagctccgccatgtcatgacaaatcttggggagaagctaactgatg 567
||||||| || || |||||||||||||| ||||| || ||||| |||||||| || || |
Sbjct: 371 tcatctctgcagcggagctccgccatgtgatgaccaaccttggcgagaagctgaccgacg 430
Query: 568 aggaggtagacgagatgatccgtgaggctgatgtcgatggtgatggcca 616
||||||| || ||||||||||| |||||||| |||||||| ||||||||
Sbjct: 431 aggaggtcgatgagatgatccgcgaggctgacgtcgatggcgatggcca 479
>gb|CD223866.1|CD223866 CCC1_30_C01.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_30_C01_A007 5', mRNA sequence
Length = 663
Score = 509 bits (257), Expect = e-142
Identities = 404/453 (89%)
Strand = Plus / Plus
Query: 208 ccatggcggaccaactcaccgacgaccagatcgccgagttcaaggaggccttcagcctct 267
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 ccatggcggaccagctcaccgacgaccagatcgccgagttcaaggaggccttcagcctct 144
Query: 268 tcgacaaggacggggatggttgcatcacgaccaaggagctgggaactgtcatgcgttcac 327
||||||||||||| || || |||||||| ||||||||||| |||||||| ||||| |||
Sbjct: 145 tcgacaaggacggcgacggctgcatcaccaccaaggagcttggaactgtgatgcgctcat 204
Query: 328 tggggcaaaaccctacagaggctgagctccaggacatgatcaatgaggtcgatgccgatg 387
||||||| |||||||| ||||||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 205 tggggcagaaccctactgaggctgagcttcaggacatgatcaatgaggttgatgctgatg 264
Query: 388 gcaacggcaccatcgattttccagagtttctgaaccttatggctcgcaagatgaaggaca 447
|||| || |||||||| ||||| |||||||| ||||| ||||| ||||||||||||||||
Sbjct: 265 gcaatggaaccatcgactttcctgagtttctcaacctgatggcacgcaagatgaaggaca 324
Query: 448 ccgactctgaggaagagctcaaggaggcctttcgtgtgtttgacaaggaccagaacggct 507
| ||||||||||| ||||||||||||||||| || ||||| |||||||||||||| ||||
Sbjct: 325 ctgactctgaggaggagctcaaggaggccttccgcgtgttcgacaaggaccagaatggct 384
Query: 508 tcatctccgccgccgagctccgccatgtcatgacaaatcttggggagaagctaactgatg 567
||||||| || || ||||| |||||||||||||| || || || |||||||| || || |
Sbjct: 385 tcatctctgctgctgagcttcgccatgtcatgaccaacctaggtgagaagctgacggacg 444
Query: 568 aggaggtagacgagatgatccgtgaggctgatgtcgatggtgatggccagattaactacg 627
||||||| ||||||||||||||||| || || || || ||||| |||||||| |||||||
Sbjct: 445 aggaggtggacgagatgatccgtgaagccgacgtggacggtgacggccagatcaactacg 504
Query: 628 aggagtttgttaaggtcatgatggccaagtgag 660
||||||| || ||||| ||||||||||||||||
Sbjct: 505 aggagttcgtgaaggtgatgatggccaagtgag 537
>gb|CN129480.1|CN129480 RHOH1_35_D12.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_35_D12_A002 5', mRNA sequence
Length = 747
Score = 509 bits (257), Expect = e-142
Identities = 404/453 (89%)
Strand = Plus / Plus
Query: 208 ccatggcggaccaactcaccgacgaccagatcgccgagttcaaggaggccttcagcctct 267
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 ccatggcggaccagctcaccgacgaccagatcgccgagttcaaggaggccttcagcctct 128
Query: 268 tcgacaaggacggggatggttgcatcacgaccaaggagctgggaactgtcatgcgttcac 327
||||||||||||| || || |||||||| ||||||||||| |||||||| ||||| |||
Sbjct: 129 tcgacaaggacggcgacggctgcatcaccaccaaggagcttggaactgtgatgcgctcat 188
Query: 328 tggggcaaaaccctacagaggctgagctccaggacatgatcaatgaggtcgatgccgatg 387
||||||| |||||||| ||||||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 189 tggggcagaaccctactgaggctgagcttcaggacatgatcaatgaggttgatgctgatg 248
Query: 388 gcaacggcaccatcgattttccagagtttctgaaccttatggctcgcaagatgaaggaca 447
|||| || |||||||| ||||| |||||||| ||||| ||||| ||||||||||||||||
Sbjct: 249 gcaatggaaccatcgactttcctgagtttctcaacctgatggcacgcaagatgaaggaca 308
Query: 448 ccgactctgaggaagagctcaaggaggcctttcgtgtgtttgacaaggaccagaacggct 507
| ||||||||||| ||||||||||||||||| || ||||| |||||||||||||| ||||
Sbjct: 309 ctgactctgaggaggagctcaaggaggccttccgcgtgttcgacaaggaccagaatggct 368
Query: 508 tcatctccgccgccgagctccgccatgtcatgacaaatcttggggagaagctaactgatg 567
||||||| || || ||||| |||||||||||||| || || || |||||||| || || |
Sbjct: 369 tcatctctgctgctgagcttcgccatgtcatgaccaacctaggtgagaagctgacggacg 428
Query: 568 aggaggtagacgagatgatccgtgaggctgatgtcgatggtgatggccagattaactacg 627
||||||| ||||||||||||||||| || || || || ||||| |||||||| |||||||
Sbjct: 429 aggaggtggacgagatgatccgtgaagccgacgtggacggtgacggccagatcaactacg 488
Query: 628 aggagtttgttaaggtcatgatggccaagtgag 660
||||||| || ||||| ||||||||||||||||
Sbjct: 489 aggagttcgtgaaggtgatgatggccaagtgag 521
>gb|CX607699.1|CX607699 ANR1_30_E10.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_30_E10_A002 3', mRNA sequence
Length = 705
Score = 509 bits (257), Expect = e-142
Identities = 404/453 (89%)
Strand = Plus / Plus
Query: 208 ccatggcggaccaactcaccgacgaccagatcgccgagttcaaggaggccttcagcctct 267
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32 ccatggcggaccagctcaccgacgaccagatcgccgagttcaaggaggccttcagcctct 91
Query: 268 tcgacaaggacggggatggttgcatcacgaccaaggagctgggaactgtcatgcgttcac 327
||||||||||||| || || |||||||| ||||||||||| |||||||| ||||| |||
Sbjct: 92 tcgacaaggacggcgagggctgcatcaccaccaaggagcttggaactgtgatgcgctcat 151
Query: 328 tggggcaaaaccctacagaggctgagctccaggacatgatcaatgaggtcgatgccgatg 387
||||||| |||||||| ||||||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 152 tggggcagaaccctactgaggctgagcttcaggacatgatcaatgaggttgatgctgatg 211
Query: 388 gcaacggcaccatcgattttccagagtttctgaaccttatggctcgcaagatgaaggaca 447
|||| || |||||||| ||||| |||||||| ||||| ||||| ||||||||||||||||
Sbjct: 212 gcaatggaaccatcgactttcctgagtttctcaacctgatggcacgcaagatgaaggaca 271
Query: 448 ccgactctgaggaagagctcaaggaggcctttcgtgtgtttgacaaggaccagaacggct 507
| ||||||||||| ||||||||||||||||| || ||||| |||||||||||||| ||||
Sbjct: 272 ctgactctgaggaggagctcaaggaggccttccgcgtgttcgacaaggaccagaatggct 331
Query: 508 tcatctccgccgccgagctccgccatgtcatgacaaatcttggggagaagctaactgatg 567
||||||| || || ||||| |||||||||||||| || || || |||||||| || || |
Sbjct: 332 tcatctctgctgctgagcttcgccatgtcatgaccaacctaggtgagaagctgacggacg 391
Query: 568 aggaggtagacgagatgatccgtgaggctgatgtcgatggtgatggccagattaactacg 627
||||||| ||||||||||||||||| || || || || ||||| |||||||| |||||||
Sbjct: 392 aggaggtggacgagatgatccgtgaagccgacgtggacggtgacggccagatcaactacg 451
Query: 628 aggagtttgttaaggtcatgatggccaagtgag 660
||||||| || ||||| ||||||||||||||||
Sbjct: 452 aggagttcgtgaaggtgatgatggccaagtgag 484
>gb|CX607784.1|CX607784 ANR1_30_E10.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_30_E10_A002 5', mRNA sequence
Length = 713
Score = 509 bits (257), Expect = e-142
Identities = 404/453 (89%)
Strand = Plus / Plus
Query: 208 ccatggcggaccaactcaccgacgaccagatcgccgagttcaaggaggccttcagcctct 267
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 ccatggcggaccagctcaccgacgaccagatcgccgagttcaaggaggccttcagcctct 129
Query: 268 tcgacaaggacggggatggttgcatcacgaccaaggagctgggaactgtcatgcgttcac 327
||||||||||||| || || |||||||| ||||||||||| |||||||| ||||| |||
Sbjct: 130 tcgacaaggacggcgagggctgcatcaccaccaaggagcttggaactgtgatgcgctcat 189
Query: 328 tggggcaaaaccctacagaggctgagctccaggacatgatcaatgaggtcgatgccgatg 387
||||||| |||||||| ||||||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 190 tggggcagaaccctactgaggctgagcttcaggacatgatcaatgaggttgatgctgatg 249
Query: 388 gcaacggcaccatcgattttccagagtttctgaaccttatggctcgcaagatgaaggaca 447
|||| || |||||||| ||||| |||||||| ||||| ||||| ||||||||||||||||
Sbjct: 250 gcaatggaaccatcgactttcctgagtttctcaacctgatggcacgcaagatgaaggaca 309
Query: 448 ccgactctgaggaagagctcaaggaggcctttcgtgtgtttgacaaggaccagaacggct 507
| ||||||||||| ||||||||||||||||| || ||||| |||||||||||||| ||||
Sbjct: 310 ctgactctgaggaggagctcaaggaggccttccgcgtgttcgacaaggaccagaatggct 369
Query: 508 tcatctccgccgccgagctccgccatgtcatgacaaatcttggggagaagctaactgatg 567
||||||| || || ||||| |||||||||||||| || || || |||||||| || || |
Sbjct: 370 tcatctctgctgctgagcttcgccatgtcatgaccaacctaggtgagaagctgacggacg 429
Query: 568 aggaggtagacgagatgatccgtgaggctgatgtcgatggtgatggccagattaactacg 627
||||||| ||||||||||||||||| || || || || ||||| |||||||| |||||||
Sbjct: 430 aggaggtggacgagatgatccgtgaagccgacgtggacggtgacggccagatcaactacg 489
Query: 628 aggagtttgttaaggtcatgatggccaagtgag 660
||||||| || ||||| ||||||||||||||||
Sbjct: 490 aggagttcgtgaaggtgatgatggccaagtgag 522
>gb|BE358473.1|BE358473 DG1_30_B04.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 517
Score = 492 bits (248), Expect = e-137
Identities = 361/399 (90%)
Strand = Plus / Plus
Query: 208 ccatggcggaccaactcaccgacgaccagatcgccgagttcaaggaggccttcagcctct 267
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 ccatggcggaccagctcaccgacgaccagatcgccgagttcaaggaggccttcagcctct 178
Query: 268 tcgacaaggacggggatggttgcatcacgaccaaggagctgggaactgtcatgcgttcac 327
||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 179 tcgacaaggacggcgatggttgcatcacaaccaaggagcttggaactgtcatgcgttcac 238
Query: 328 tggggcaaaaccctacagaggctgagctccaggacatgatcaatgaggtcgatgccgatg 387
|||| |||||||| || ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 239 tgggtcaaaacccaaccgaggctgagcttcaggacatgatcaatgaggtcgatgccgatg 298
Query: 388 gcaacggcaccatcgattttccagagtttctgaaccttatggctcgcaagatgaaggaca 447
|||| |||||||| || ||||| ||||| || ||||| ||||| ||||||||||||||||
Sbjct: 299 gcaatggcaccattgactttcctgagttcctcaacctcatggcccgcaagatgaaggaca 358
Query: 448 ccgactctgaggaagagctcaaggaggcctttcgtgtgtttgacaaggaccagaacggct 507
||||||| ||||| |||||||||||||| || | ||||| |||||||||||||||||||
Sbjct: 359 ccgactccgaggaggagctcaaggaggcgttcagggtgttcgacaaggaccagaacggct 418
Query: 508 tcatctccgccgccgagctccgccatgtcatgacaaatcttggggagaagctaactgatg 567
||||||| || || |||||||||||||| ||||| || ||||| |||||||| || || |
Sbjct: 419 tcatctctgcagcggagctccgccatgtgatgaccaaccttggcgagaagctgaccgacg 478
Query: 568 aggaggtagacgagatgatccgtgaggctgatgtcgatg 606
||||||| || ||||||||||| |||||||| ||| |||
Sbjct: 479 aggaggtcgatgagatgatccgcgaggctgacgtcnatg 517
>gb|CN129681.1|CN129681 RHOH1_36_F11.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_36_F11_A002 5', mRNA sequence
Length = 720
Score = 478 bits (241), Expect = e-133
Identities = 400/453 (88%)
Strand = Plus / Plus
Query: 208 ccatggcggaccaactcaccgacgaccagatcgccgagttcaaggaggccttcagcctct 267
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 92 ccatggcggaccagctcaccgacgaccagatcgcggagttcaaggaggccttcagcctct 151
Query: 268 tcgacaaggacggggatggttgcatcacgaccaaggagctgggaactgtcatgcgttcac 327
|||||||||| || || || |||||||| ||||||||||| |||||||| ||||| || |
Sbjct: 152 tcgacaaggatggcgacggctgcatcaccaccaaggagcttggaactgtgatgcgctccc 211
Query: 328 tggggcaaaaccctacagaggctgagctccaggacatgatcaatgaggtcgatgccgatg 387
| || || |||||||| ||||| ||||| |||||||||||||||||||| ||||| ||||
Sbjct: 212 ttggccagaaccctaccgaggcagagctgcaggacatgatcaatgaggttgatgctgatg 271
Query: 388 gcaacggcaccatcgattttccagagtttctgaaccttatggctcgcaagatgaaggaca 447
|||| || ||||| || || |||||||| |||||||| ||||| | |||||||||||||
Sbjct: 272 gcaatgggaccattgacttcccagagttcctgaacctgatggcaaggaagatgaaggaca 331
Query: 448 ccgactctgaggaagagctcaaggaggcctttcgtgtgtttgacaaggaccagaacggct 507
||||||||||||| ||||||||||||||||| || || ||||||||||||||||| || |
Sbjct: 332 ccgactctgaggaggagctcaaggaggccttccgcgtctttgacaaggaccagaatggtt 391
Query: 508 tcatctccgccgccgagctccgccatgtcatgacaaatcttggggagaagctaactgatg 567
||||||| || || |||||||||||||||||||| || || || |||||||| || || |
Sbjct: 392 tcatctcggctgctgagctccgccatgtcatgaccaacctcggcgagaagctgaccgacg 451
Query: 568 aggaggtagacgagatgatccgtgaggctgatgtcgatggtgatggccagattaactacg 627
||||||| ||||||||||||||||||||||| |||||||| || |||||||| ||||| |
Sbjct: 452 aggaggtcgacgagatgatccgtgaggctgacgtcgatggcgacggccagatcaactatg 511
Query: 628 aggagtttgttaaggtcatgatggccaagtgag 660
| |||||||||||||| ||||||||||||||||
Sbjct: 512 aagagtttgttaaggttatgatggccaagtgag 544
>gb|CD219572.1|CD219572 CCC1_57_F03.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_57_F03_A007 5', mRNA sequence
Length = 612
Score = 470 bits (237), Expect = e-130
Identities = 399/453 (88%)
Strand = Plus / Plus
Query: 208 ccatggcggaccaactcaccgacgaccagatcgccgagttcaaggaggccttcagcctct 267
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 103 ccatggcggaccagctcaccgacgaccagatcgcggagttcaaggaggccttcagcctct 162
Query: 268 tcgacaaggacggggatggttgcatcacgaccaaggagctgggaactgtcatgcgttcac 327
|||||||||| || || || |||||||| ||||||||||| |||||||| ||||| || |
Sbjct: 163 tcgacaaggatggcgacggctgcatcaccaccaaggagcttggaactgtgatgcgctccc 222
Query: 328 tggggcaaaaccctacagaggctgagctccaggacatgatcaatgaggtcgatgccgatg 387
| || || |||||||| ||||| ||||| |||||||||||||||||||| ||||| ||||
Sbjct: 223 ttggccagaaccctaccgaggcagagctgcaggacatgatcaatgaggttgatgctgatg 282
Query: 388 gcaacggcaccatcgattttccagagtttctgaaccttatggctcgcaagatgaaggaca 447
|||| || ||||| || || |||||||| |||||||| ||||| | |||||||||||||
Sbjct: 283 gcaatgggaccattgacttcccagagttcctgaacctgatggcaaggaagatgaaggaca 342
Query: 448 ccgactctgaggaagagctcaaggaggcctttcgtgtgtttgacaaggaccagaacggct 507
||||||||||||| ||||||||||||| ||| || || ||||||||||||||||| || |
Sbjct: 343 ccgactctgaggaggagctcaaggagggcttccgcgtctttgacaaggaccagaatggtt 402
Query: 508 tcatctccgccgccgagctccgccatgtcatgacaaatcttggggagaagctaactgatg 567
||||||| || || |||||||||||||||||||| || || || |||||||| || || |
Sbjct: 403 tcatctcggctgctgagctccgccatgtcatgaccaacctcggcgagaagctgaccgacg 462
Query: 568 aggaggtagacgagatgatccgtgaggctgatgtcgatggtgatggccagattaactacg 627
||||||| ||||||||||||||||||||||| |||||||| || |||||||| ||||| |
Sbjct: 463 aggaggtcgacgagatgatccgtgaggctgacgtcgatggcgacggccagatcaactatg 522
Query: 628 aggagtttgttaaggtcatgatggccaagtgag 660
| |||||||||||||| ||||||||||||||||
Sbjct: 523 aagagtttgttaaggttatgatggccaagtgag 555
>gb|CX609153.1|CX609153 ANR1_11_B01.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_11_B01_A002 3', mRNA sequence
Length = 730
Score = 470 bits (237), Expect = e-130
Identities = 399/453 (88%)
Strand = Plus / Plus
Query: 208 ccatggcggaccaactcaccgacgaccagatcgccgagttcaaggaggccttcagcctct 267
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 36 ccatggcggaccagctcaccgacgaccagatcgcggagttcaaggaggccttcagcctct 95
Query: 268 tcgacaaggacggggatggttgcatcacgaccaaggagctgggaactgtcatgcgttcac 327
|||||||||| || || || |||||||| ||||||||||| |||||||| ||||| || |
Sbjct: 96 tcgacaaggatggcgacggctgcatcaccaccaaggagcttggaactgtgatgcgctccc 155
Query: 328 tggggcaaaaccctacagaggctgagctccaggacatgatcaatgaggtcgatgccgatg 387
| || || |||||||| ||||| ||||| |||||||||||||||||||| ||||| ||||
Sbjct: 156 ttggccagaaccctaccgaggcagagctgcaggacatgatcaatgaggttgatgctgatg 215
Query: 388 gcaacggcaccatcgattttccagagtttctgaaccttatggctcgcaagatgaaggaca 447
|||| || ||||| || || |||||||| |||| ||| ||||| | |||||||||||||
Sbjct: 216 gcaatgggaccattgacttcccagagttcctgagcctgatggcaaggaagatgaaggaca 275
Query: 448 ccgactctgaggaagagctcaaggaggcctttcgtgtgtttgacaaggaccagaacggct 507
||||||||||||| ||||||||||||||||| || || ||||||||||||||||| || |
Sbjct: 276 ccgactctgaggaggagctcaaggaggccttccgcgtctttgacaaggaccagaatggtt 335
Query: 508 tcatctccgccgccgagctccgccatgtcatgacaaatcttggggagaagctaactgatg 567
||||||| || || |||||||||||||||||||| || || || |||||||| || || |
Sbjct: 336 tcatctcggctgctgagctccgccatgtcatgaccaacctcggcgagaagctgaccgacg 395
Query: 568 aggaggtagacgagatgatccgtgaggctgatgtcgatggtgatggccagattaactacg 627
||||||| ||||||||||||||||||||||| |||||||| || |||||||| ||||| |
Sbjct: 396 aggaggtcgacgagatgatccgtgaggctgacgtcgatggcgacggccagatcaactatg 455
Query: 628 aggagtttgttaaggtcatgatggccaagtgag 660
| |||||||||||||| ||||||||||||||||
Sbjct: 456 aagagtttgttaaggttatgatggccaagtgag 488
>gb|CX609235.1|CX609235 ANR1_11_B01.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_11_B01_A002 5', mRNA sequence
Length = 683
Score = 470 bits (237), Expect = e-130
Identities = 399/453 (88%)
Strand = Plus / Plus
Query: 208 ccatggcggaccaactcaccgacgaccagatcgccgagttcaaggaggccttcagcctct 267
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 92 ccatggcggaccagctcaccgacgaccagatcgcggagttcaaggaggccttcagcctct 151
Query: 268 tcgacaaggacggggatggttgcatcacgaccaaggagctgggaactgtcatgcgttcac 327
|||||||||| || || || |||||||| ||||||||||| |||||||| ||||| || |
Sbjct: 152 tcgacaaggatggcgacggctgcatcaccaccaaggagcttggaactgtgatgcgctccc 211
Query: 328 tggggcaaaaccctacagaggctgagctccaggacatgatcaatgaggtcgatgccgatg 387
| || || |||||||| ||||| ||||| |||||||||||||||||||| ||||| ||||
Sbjct: 212 ttggccagaaccctaccgaggcagagctgcaggacatgatcaatgaggttgatgctgatg 271
Query: 388 gcaacggcaccatcgattttccagagtttctgaaccttatggctcgcaagatgaaggaca 447
|||| || ||||| || || |||||||| |||| ||| ||||| | |||||||||||||
Sbjct: 272 gcaatgggaccattgacttcccagagttcctgagcctgatggcaaggaagatgaaggaca 331
Query: 448 ccgactctgaggaagagctcaaggaggcctttcgtgtgtttgacaaggaccagaacggct 507
||||||||||||| ||||||||||||||||| || || ||||||||||||||||| || |
Sbjct: 332 ccgactctgaggaggagctcaaggaggccttccgcgtctttgacaaggaccagaatggtt 391
Query: 508 tcatctccgccgccgagctccgccatgtcatgacaaatcttggggagaagctaactgatg 567
||||||| || || |||||||||||||||||||| || || || |||||||| || || |
Sbjct: 392 tcatctcggctgctgagctccgccatgtcatgaccaacctcggcgagaagctgaccgacg 451
Query: 568 aggaggtagacgagatgatccgtgaggctgatgtcgatggtgatggccagattaactacg 627
||||||| ||||||||||||||||||||||| |||||||| || |||||||| ||||| |
Sbjct: 452 aggaggtcgacgagatgatccgtgaggctgacgtcgatggcgacggccagatcaactatg 511
Query: 628 aggagtttgttaaggtcatgatggccaagtgag 660
| |||||||||||||| ||||||||||||||||
Sbjct: 512 aagagtttgttaaggttatgatggccaagtgag 544
>gb|CF758943.1|CF758943 DSAF1_38_D07.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_38_D07_A011 3', mRNA sequence
Length = 507
Score = 464 bits (234), Expect = e-129
Identities = 356/396 (89%), Gaps = 8/396 (2%)
Strand = Plus / Plus
Query: 527 ccgccatgtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgat 586
|||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||
Sbjct: 1 ccgccatgtcatgacaaatcttggtgagaagctaactgatgaggaggtggatgagatgat 60
Query: 587 ccgtgaggctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcat 646
||||||||||||||| ||||||||||| ||||| ||||| ||||||||||| || |||||
Sbjct: 61 ccgtgaggctgatgtggatggtgatggtcagatcaactatgaggagtttgtcaaagtcat 120
Query: 647 gatggccaagtgagccacaaaagcataagctcaaggcggagaggattgtgcactgcatat 706
||||||||||||||||||| || ||||| || |||||||||| ||||| ||| |||||||
Sbjct: 121 gatggccaagtgagccacagaaccataatctgaaggcggagaagattgggcattgcatat 180
Query: 707 tagtcaagatgcaatgcaactcttatttcatcgaat---tccagtgaaacattctgctag 763
|||||||| ||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 181 tagtcaag-----atgcaactcttatttcatcgacttcctccagtgaaacattctgctag 235
Query: 764 ttgtagtttttgaaaggcaatgcagttgctgctttgttcttccctccagtgtgttttcag 823
|||||||| |||||||| ||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 236 ttgtagttgctgaaaggcgatgtagttcctgctttgttcttccctccagtgtgttttcag 295
Query: 824 aactgttgattcatgtgaaactgtaatgattgccctccctgctgtgtcttggttgcagtt 883
|| ||||| |||||||||| ||||||||||||||||| |||||||||||| ||||||||
Sbjct: 296 aaatgttgtttcatgtgaacttgtaatgattgccctccttgctgtgtcttgattgcagtt 355
Query: 884 gaaaccatatgtagctacattccccctcccaccacc 919
|||||||||||||| || |||| ||||| |||||||
Sbjct: 356 gaaaccatatgtagttatattctccctctcaccacc 391
Score = 58.0 bits (29), Expect = 2e-006
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 921 ccacacatcaacttctgcttcaccttttttagcatcaatggatggccggttgttttt 977
|||||||||||||||||||||| || | |||| |||||| ||||||| |||||||||
Sbjct: 403 ccacacatcaacttctgcttca-ctctgttagtatcaattgatggcctgttgttttt 458
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 295,195
Number of Sequences: 832831
Number of extensions: 295195
Number of successful extensions: 82523
Number of sequences better than 0.5: 219
Number of HSP's better than 0.5 without gapping: 219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81928
Number of HSP's gapped (non-prelim): 395
length of query: 986
length of database: 491,359,669
effective HSP length: 20
effective length of query: 966
effective length of database: 474,703,049
effective search space: 458563145334
effective search space used: 458563145334
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)