BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2437779.2.1
(3727 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD423905.1|CD423905 SA1_2_G12.b1_A002 Salicylic acid-tre... 948 0.0
gb|CW148395.1|CW148395 104_547_11141932_148_35011_016 Sorgh... 910 0.0
gb|CF072057.1|CF072057 FE1_20_C10.b1_A002 Iron-deficient se... 793 0.0
gb|BG948758.1|BG948758 LG1_330_A01.b1_A002 Light Grown 1 (L... 773 0.0
gb|BE598881.1|BE598881 PI1_83_C07.b1_A002 Pathogen induced ... 767 0.0
gb|CD211954.1|CD211954 HS1_67_A05.g1_A012 Heat-shocked seed... 664 0.0
gb|AW286294.1|AW286294 LG1_330_A01.g1_A002 Light Grown 1 (L... 581 e-163
gb|BE598541.1|BE598541 PI1_83_C07.g1_A002 Pathogen induced ... 577 e-162
gb|CD211868.1|CD211868 HS1_67_A05.b1_A012 Heat-shocked seed... 557 e-156
gb|CW148394.1|CW148394 104_547_11141932_116_35015_016 Sorgh... 553 e-155
gb|CD220053.1|CD220053 CCC1_60_F06.g1_A007 Callus culture/c... 545 e-152
gb|BG103131.1|BG103131 RHIZ2_18_E07.g1_A003 Rhizome2 (RHIZ2... 478 e-132
gb|CN127278.1|CN127278 RHOH1_22_C03.b1_A002 Acid- and alkal... 416 e-114
gb|BI245743.1|BI245743 IP1_63_G04.b1_A002 Immature pannicle... 387 e-105
gb|CN128917.1|CN128917 RHOH1_32_H10.b1_A002 Acid- and alkal... 381 e-103
gb|CW213542.1|CW213542 104_645_11191609_148_37039_013 Sorgh... 367 5e-099
gb|BI140951.1|BI140951 IP1_41_C08.b1_A002 Immature pannicle... 335 2e-089
gb|CN129331.1|CN129331 RHOH1_34_G09.g1_A002 Acid- and alkal... 335 2e-089
gb|CN128754.1|CN128754 RHOH1_31_H09.b1_A002 Acid- and alkal... 331 3e-088
gb|CD423915.1|CD423915 SA1_2_G12.g1_A002 Salicylic acid-tre... 317 4e-084
gb|CD227355.1|CD227355 CCC1_50_D12.g1_A007 Callus culture/c... 297 4e-078
gb|BG273410.1|BG273410 OV2_25_D04.b1_A002 Ovary 2 (OV2) Sor... 291 2e-076
gb|CL177245.1|CL177245 104_384_10893704_116_31916_152 Sorgh... 278 4e-072
gb|BG557440.1|BG557440 EM1_44_B10.b1_A002 Embryo 1 (EM1) So... 278 4e-072
gb|BG465505.1|BG465505 RHIZ2_45_D07.b1_A003 Rhizome2 (RHIZ2... 276 1e-071
gb|BG103285.1|BG103285 RHIZ2_18_E07.b1_A003 Rhizome2 (RHIZ2... 272 2e-070
gb|BG947832.1|BG947832 IP1_5_G03.b1_A002 Immature pannicle ... 270 9e-070
gb|BI076099.1|BI076099 IP1_25_G03.b1_A002 Immature pannicle... 270 9e-070
gb|BI245885.1|BI245885 IP1_64_G05.b1_A002 Immature pannicle... 270 9e-070
gb|CD233360.1|CD233360 SS1_13_G11.g1_A012 Salt-stressed see... 270 9e-070
gb|CF071834.1|CF071834 FE1_19_D03.b1_A002 Iron-deficient se... 270 9e-070
gb|CF071970.1|CF071970 FE1_19_D03.g1_A002 Iron-deficient se... 270 9e-070
gb|CF771740.1|CF771740 DSBF1_23_E06.g1_A010 Drought-stresse... 270 9e-070
gb|CN128839.1|CN128839 RHOH1_31_H09.g1_A002 Acid- and alkal... 270 9e-070
gb|BG557221.1|BG557221 EM1_44_B10.g1_A002 Embryo 1 (EM1) So... 262 2e-067
gb|CD427292.1|CD427292 SA1_18_E03.g1_A002 Salicylic acid-tr... 262 2e-067
gb|CW024404.1|CW024404 104_164_10434936_1_30002 Sorghum met... 260 8e-067
gb|CW366544.1|CW366544 fsbb001f039j12f0 Sorghum methylation... 260 8e-067
gb|CD233339.1|CD233339 SS1_13_G11.b1_A012 Salt-stressed see... 254 5e-065
gb|CD210886.1|CD210886 HS1_66_G06.g1_A012 Heat-shocked seed... 248 3e-063
gb|BI245815.1|BI245815 IP1_64_G05.g1_A002 Immature pannicle... 246 1e-062
gb|BI643766.1|BI643766 IP1_56_G10.b1_A002 Immature pannicle... 242 2e-061
gb|BF481793.1|BF481793 FM1_20_D08.b1_A003 Floral-Induced Me... 224 5e-056
gb|CL192265.1|CL192265 104_415_10940114_116_32261_015 Sorgh... 204 4e-050
gb|BF586580.1|BF586580 FM1_29_A05.b1_A003 Floral-Induced Me... 204 4e-050
gb|CD219969.1|CD219969 CCC1_60_F06.b1_A007 Callus culture/c... 204 4e-050
gb|BE355233.1|BE355233 DG1_113_C09.b1_A002 Dark Grown 1 (DG... 200 7e-049
gb|BI099373.1|BI099373 IP1_41_C08.g1_A002 Immature pannicle... 198 3e-048
gb|BG240580.1|BG240580 OV1_31_F08.b1_A002 Ovary 1 (OV1) Sor... 180 6e-043
gb|BG559985.1|BG559985 RHIZ2_68_A11.b1_A003 Rhizome2 (RHIZ2... 174 4e-041
gb|CN134244.1|CN134244 OX1_25_E01.b1_A002 Oxidatively-stres... 167 9e-039
gb|BI075805.1|BI075805 IP1_21_D10.b1_A002 Immature pannicle... 161 6e-037
gb|BI211927.1|BI211927 IP1_62_B12.b1_A002 Immature pannicle... 161 6e-037
gb|CL167974.1|CL167974 104_365_10810478_114_31804_158 Sorgh... 159 2e-036
gb|CW031320.1|CW031320 104_259_10500738_116_30398 Sorghum m... 159 2e-036
gb|CW315001.1|CW315001 104_805_11472128_148_35822_018 Sorgh... 159 2e-036
gb|CL148486.1|CL148486 104_328_10593130_148_31782_254 Sorgh... 157 9e-036
gb|CW385345.1|CW385345 fsbb001f068m13k0 Sorghum methylation... 157 9e-036
gb|CW235189.1|CW235189 104_690_11214849_148_37413_041 Sorgh... 155 4e-035
gb|CW235188.1|CW235188 104_690_11214849_116_37409_041 Sorgh... 151 6e-034
gb|BE357339.1|BE357339 DG1_148_D12.g1_A002 Dark Grown 1 (DG... 151 6e-034
gb|CL148485.1|CL148485 104_328_10593130_116_31783_254 Sorgh... 149 2e-033
gb|CX607503.1|CX607503 ANR1_29_C09.b1_A002 Anaerobic roots ... 147 9e-033
gb|BG465855.1|BG465855 RHIZ2_45_D07.g1_A003 Rhizome2 (RHIZ2... 143 1e-031
gb|CX607839.1|CX607839 ANR1_31_C06.b1_A002 Anaerobic roots ... 143 1e-031
gb|BI075180.1|BI075180 IP1_17_A09.b1_A002 Immature pannicle... 141 5e-031
gb|BG050771.1|BG050771 FM1_70_D01.b1_A003 Floral-Induced Me... 139 2e-030
gb|CW413531.1|CW413531 fsbb001f112l18f0 Sorghum methylation... 131 5e-028
gb|CD213148.1|CD213148 HS1_28_B08.g1_A012 Heat-shocked seed... 127 8e-027
gb|BZ334230.1|BZ334230 hx77g06.b1 WGS-SbicolorF (JM107 adap... 123 1e-025
gb|BZ334231.1|BZ334231 hx77g06.g1 WGS-SbicolorF (JM107 adap... 123 1e-025
gb|BZ335207.1|BZ335207 hx96c01.b1 WGS-SbicolorF (JM107 adap... 123 1e-025
gb|BZ335208.1|BZ335208 hx96c01.g1 WGS-SbicolorF (JM107 adap... 123 1e-025
gb|CW213541.1|CW213541 104_645_11191609_116_37038_013 Sorgh... 121 5e-025
gb|CF433508.1|CF433508 NIT1_27_E11.g1_A002 Nitrogen-deficie... 119 2e-024
gb|CN129000.1|CN129000 RHOH1_32_H10.g1_A002 Acid- and alkal... 117 8e-024
gb|BG101839.1|BG101839 RHIZ2_23_A10.g1_A003 Rhizome2 (RHIZ2... 115 3e-023
gb|BE918570.1|BE918570 OV1_8_E09.b1_A002 Ovary 1 (OV1) Sorg... 113 1e-022
gb|BF317903.1|BF317903 OV1_9_B10.b1_A002 Ovary 1 (OV1) Sorg... 113 1e-022
gb|CW304966.1|CW304966 104_790_11466066_148_37436_077 Sorgh... 109 2e-021
gb|BF420934.1|BF420934 FM1_5_B03.g1_A003 Floral-Induced Mer... 109 2e-021
gb|CN134554.1|CN134554 OX1_27_C06.b1_A002 Oxidatively-stres... 109 2e-021
gb|CL167975.1|CL167975 104_365_10810478_116_31805_158 Sorgh... 107 7e-021
gb|BI212040.1|BI212040 IP1_63_G04.g1_A002 Immature pannicle... 107 7e-021
gb|BF585752.1|BF585752 FM1_24_B07.b1_A003 Floral-Induced Me... 105 3e-020
gb|CN129574.1|CN129574 RHOH1_36_E05.b3_A002 Acid- and alkal... 105 3e-020
gb|AW283377.1|AW283377 LG1_223_D12.g1_A002 Light Grown 1 (L... 103 1e-019
gb|BF587214.1|BF587214 FM1_33_F03.b2_A003 Floral-Induced Me... 103 1e-019
gb|BG947765.1|BG947765 IP1_8_G12.g1_A002 Immature pannicle ... 103 1e-019
gb|BG948058.1|BG948058 IP1_8_G12.b1_A002 Immature pannicle ... 103 1e-019
gb|BI074550.1|BI074550 IP1_16_A11.g1_A002 Immature pannicle... 103 1e-019
gb|BI074880.1|BI074880 IP1_17_A09.g1_A002 Immature pannicle... 103 1e-019
gb|CF430600.1|CF430600 NIT1_3_E06.b1_A002 Nitrogen-deficien... 103 1e-019
gb|BF481056.1|BF481056 FM1_15_G12.b1_A003 Floral-Induced Me... 101 5e-019
gb|CF433456.1|CF433456 NIT1_27_E11.b1_A002 Nitrogen-deficie... 101 5e-019
gb|CN128155.1|CN128155 RHOH1_27_H08.b1_A002 Acid- and alkal... 101 5e-019
gb|CW113232.1|CW113232 104_487_11105330_116_34554_007 Sorgh... 100 2e-018
gb|CW378707.1|CW378707 fsbb001f057j16f0 Sorghum methylation... 100 2e-018
gb|CW482520.1|CW482520 fsbb001f242k13f0 Sorghum methylation... 100 2e-018
gb|CW482521.1|CW482521 fsbb001f242k13k0 Sorghum methylation... 100 2e-018
gb|CW502290.1|CW502290 fsbb001f298i22f0 Sorghum methylation... 100 2e-018
gb|BG102383.1|BG102383 RHIZ2_23_A10.b1_A003 Rhizome2 (RHIZ2... 100 2e-018
gb|BG241776.1|BG241776 RHIZ2_50_A08.b1_A003 Rhizome2 (RHIZ2... 100 2e-018
gb|BG465562.1|BG465562 RHIZ2_46_A10.b1_A003 Rhizome2 (RHIZ2... 100 2e-018
gb|CD425359.1|CD425359 SA1_11_F01.g1_A002 Salicylic acid-tr... 100 2e-018
gb|CF429881.1|CF429881 PH1_25_C04.b1_A002 Phosphorous-defic... 100 2e-018
gb|BF480979.1|BF480979 FM1_15_G12.g1_A003 Floral-Induced Me... 98 7e-018
gb|BF481250.1|BF481250 FM1_17_E01.b1_A003 Floral-Induced Me... 98 7e-018
gb|BG933529.1|BG933529 WS1_4_E04.b1_A002 Water-stressed 1 (... 98 7e-018
gb|BI140990.1|BI140990 IP1_41_G10.b1_A002 Immature pannicle... 98 7e-018
gb|CF433645.1|CF433645 NIT1_28_F11.b1_A002 Nitrogen-deficie... 98 7e-018
gb|CN132882.1|CN132882 OX1_8_F12.g1_A002 Oxidatively-stress... 98 7e-018
gb|CX618063.1|CX618063 GABR1_37_B05.g1_A002 GA- or brassino... 98 7e-018
gb|BF585666.1|BF585666 FM1_24_B07.g1_A003 Floral-Induced Me... 96 3e-017
gb|BG239994.1|BG239994 OV1_31_F08.g1_A002 Ovary 1 (OV1) Sor... 96 3e-017
gb|BI075362.1|BI075362 IP1_19_F06.b1_A002 Immature pannicle... 96 3e-017
gb|CD227828.1|CD227828 CCC1_56_G02.b1_A007 Callus culture/c... 96 3e-017
gb|CF072959.1|CF072959 FE1_27_D01.b1_A002 Iron-deficient se... 96 3e-017
gb|BF656010.1|BF656010 FM1_42_G12.b1_A003 Floral-Induced Me... 94 1e-016
gb|CF433027.1|CF433027 NIT1_20_E12.g1_A002 Nitrogen-deficie... 94 1e-016
gb|CW058702.1|CW058702 104_301_10518887_115_30164 Sorghum m... 92 4e-016
gb|CW023463.1|CW023463 104_163_10432463_1_30001 Sorghum met... 90 2e-015
gb|CW296109.1|CW296109 104_777_11461315_116_35620_068 Sorgh... 90 2e-015
gb|BE917989.1|BE917989 OV1_8_E09.g1_A002 Ovary 1 (OV1) Sorg... 90 2e-015
gb|BF655935.1|BF655935 FM1_42_G12.g1_A003 Floral-Induced Me... 90 2e-015
gb|BM326022.1|BM326022 PIC1_64_G10.b1_A002 Pathogen-infecte... 90 2e-015
gb|BE362654.1|BE362654 DG1_88_F12.b1_A002 Dark Grown 1 (DG1... 88 7e-015
gb|BF317768.1|BF317768 OV1_9_B10.g1_A002 Ovary 1 (OV1) Sorg... 88 7e-015
gb|AW284432.2|AW284432 LG1_289_E12.g1_A002 Light Grown 1 (L... 86 3e-014
gb|BG052201.1|BG052201 RHIZ2_7_D11.b1_A003 Rhizome2 (RHIZ2)... 86 3e-014
gb|AW744882.1|AW744882 LG1_384_E04.b1_A002 Light Grown 1 (L... 84 1e-013
gb|BE918058.1|BE918058 OV1_1_D06.b1_A002 Ovary 1 (OV1) Sorg... 84 1e-013
gb|BE918108.1|BE918108 OV1_2_A10.b1_A002 Ovary 1 (OV1) Sorg... 84 1e-013
gb|CF432727.1|CF432727 NIT1_18_C04.g1_A002 Nitrogen-deficie... 84 1e-013
gb|CW315969.1|CW315969 104_807_11472644_148_35845_076 Sorgh... 82 4e-013
gb|BE355115.1|BE355115 DG1_113_C09.g1_A002 Dark Grown 1 (DG... 82 4e-013
gb|BF655662.1|BF655662 FM1_47_C09.b1_A003 Floral-Induced Me... 82 4e-013
gb|BG947269.1|BG947269 IP1_3_E08.b1_A002 Immature pannicle ... 82 4e-013
gb|CD227257.1|CD227257 CCC1_50_D12.b1_A007 Callus culture/c... 82 4e-013
gb|CF430024.1|CF430024 PH1_25_C04.g1_A002 Phosphorous-defic... 82 4e-013
gb|CX607587.1|CX607587 ANR1_29_C09.g1_A002 Anaerobic roots ... 82 4e-013
gb|CW140470.1|CW140470 104_531_11135797_116_34926_063 Sorgh... 80 2e-012
gb|BG052472.1|BG052472 RHIZ2_13_D07.b1_A003 Rhizome2 (RHIZ2... 80 2e-012
gb|BG948020.1|BG948020 IP1_8_D05.b1_A002 Immature pannicle ... 80 2e-012
gb|BG050984.1|BG050984 FM1_55_A02.b1_A003 Floral-Induced Me... 78 7e-012
gb|BG948517.1|BG948517 IP1_10_F08.b1_A002 Immature pannicle... 78 7e-012
gb|BI141114.1|BI141114 IP1_43_D01.b1_A002 Immature pannicle... 78 7e-012
gb|CF073545.1|CF073545 FE1_10_F02.g1_A002 Iron-deficient se... 76 3e-011
gb|CF433703.1|CF433703 NIT1_28_F11.g1_A002 Nitrogen-deficie... 76 3e-011
gb|CF757235.1|CF757235 DSAF1_15_D07.g1_A011 Drought-stresse... 76 3e-011
gb|CN129247.1|CN129247 RHOH1_34_G09.b3_A002 Acid- and alkal... 76 3e-011
gb|CX608205.1|CX608205 ANR1_37_F12.b1_A002 Anaerobic roots ... 76 3e-011
gb|CW282760.1|CW282760 104_759_11408886_116_35478_031 Sorgh... 74 1e-010
gb|CW378708.1|CW378708 fsbb001f057j16k0 Sorghum methylation... 74 1e-010
gb|CD427212.1|CD427212 SA1_18_E03.b1_A002 Salicylic acid-tr... 74 1e-010
gb|CW502291.1|CW502291 fsbb001f298i22k0 Sorghum methylation... 72 4e-010
gb|BE356017.1|BE356017 DG1_121_D11.b1_A002 Dark Grown 1 (DG... 70 2e-009
gb|BG048793.1|BG048793 OV1_23_B06.b1_A002 Ovary 1 (OV1) Sor... 70 2e-009
gb|BG241885.1|BG241885 RHIZ2_51_H04.b1_A003 Rhizome2 (RHIZ2... 70 2e-009
gb|BG465791.1|BG465791 RHIZ2_48_F08.b1_A003 Rhizome2 (RHIZ2... 70 2e-009
gb|BG465808.1|BG465808 RHIZ2_48_H02.b1_A003 Rhizome2 (RHIZ2... 70 2e-009
gb|BG560234.1|BG560234 RHIZ2_71_G02.b1_A003 Rhizome2 (RHIZ2... 70 2e-009
gb|BI141001.1|BI141001 IP1_41_H09.b1_A002 Immature pannicle... 70 2e-009
gb|CD233283.1|CD233283 SS1_13_H10.b1_A012 Salt-stressed see... 70 2e-009
gb|CX608297.1|CX608297 ANR1_37_F12.g1_A002 Anaerobic roots ... 70 2e-009
gb|CW203376.1|CW203376 104_631_11185990_148_36906_095 Sorgh... 68 6e-009
gb|CW237955.1|CW237955 104_694_11216459_116_37393_038 Sorgh... 68 6e-009
gb|CW451925.1|CW451925 fsbb001f192d14f0 Sorghum methylation... 68 6e-009
gb|AW564350.1|AW564350 LG1_290_D05.b1_A002 Light Grown 1 (L... 68 6e-009
gb|AW564240.1|AW564240 LG1_289_E12.b1_A002 Light Grown 1 (L... 66 3e-008
gb|BE357401.1|BE357401 DG1_15_D04.b2_A002 Dark Grown 1 (DG1... 66 3e-008
gb|BG051983.1|BG051983 RHIZ2_7_D11.g1_A003 Rhizome2 (RHIZ2)... 66 3e-008
gb|BI074863.1|BI074863 IP1_16_A11.b1_A002 Immature pannicle... 66 3e-008
gb|BI211821.1|BI211821 IP1_61_F01.b1_A002 Immature pannicle... 66 3e-008
gb|CN129665.1|CN129665 RHOH1_36_E05.g1_A002 Acid- and alkal... 66 3e-008
gb|CW224628.1|CW224628 104_662_11203928_116_37202_032 Sorgh... 64 1e-007
gb|AW672122.1|AW672122 LG1_357_F04.b1_A002 Light Grown 1 (L... 64 1e-007
gb|BF585972.1|BF585972 FM1_25_H01.b1_A003 Floral-Induced Me... 64 1e-007
gb|BG241543.1|BG241543 RHIZ2_51_H04.g1_A003 Rhizome2 (RHIZ2... 64 1e-007
gb|BI141589.1|BI141589 IP1_54_D04.b1_A002 Immature pannicle... 64 1e-007
gb|BI643725.1|BI643725 IP1_56_C04.b1_A002 Immature pannicle... 64 1e-007
gb|CL172543.1|CL172543 104_375_10890237_148_31796_141 Sorgh... 62 4e-007
gb|CW296110.1|CW296110 104_777_11461315_148_35624_068 Sorgh... 62 4e-007
gb|CW335567.1|CW335567 104_834_11483110_116_36083_087 Sorgh... 62 4e-007
gb|CW481818.1|CW481818 fsbb001f241j14f0 Sorghum methylation... 62 4e-007
gb|BE126016.1|BE126016 DG1_65_B11.b1_A002 Dark Grown 1 (DG1... 62 4e-007
gb|BG103304.1|BG103304 RHIZ2_18_D07.b1_A003 Rhizome2 (RHIZ2... 62 4e-007
gb|BG103336.1|BG103336 RHIZ2_18_H12.b1_A003 Rhizome2 (RHIZ2... 62 4e-007
gb|CN134640.1|CN134640 OX1_27_C06.g1_A002 Oxidatively-stres... 62 4e-007
gb|BZ781020.1|BZ781020 ii23b02.g1 WGS-SbicolorF (DH5a methy... 60 2e-006
gb|CW384219.1|CW384219 fsbb001f067c14f0 Sorghum methylation... 60 2e-006
gb|CW496562.1|CW496562 fsbb001f288o02k0 Sorghum methylation... 60 2e-006
gb|BG241798.1|BG241798 RHIZ2_50_D01.b1_A003 Rhizome2 (RHIZ2... 60 2e-006
gb|CW164547.1|CW164547 104_572_11152044_148_36463_038 Sorgh... 58 6e-006
gb|CW224629.1|CW224629 104_662_11203928_148_37201_032 Sorgh... 58 6e-006
gb|BE918278.1|BE918278 OV1_1_D06.g1_A002 Ovary 1 (OV1) Sorg... 58 6e-006
gb|CL172542.1|CL172542 104_375_10890237_116_31797_141 Sorgh... 56 2e-005
gb|CL177246.1|CL177246 104_384_10893704_148_31915_152 Sorgh... 56 2e-005
gb|CW056421.1|CW056421 104_298_10517674_114_30156 Sorghum m... 56 2e-005
gb|CW164546.1|CW164546 104_572_11152044_116_36464_038 Sorgh... 56 2e-005
gb|CW350794.1|CW350794 fsbb001f012e11k0 Sorghum methylation... 56 2e-005
gb|CW480836.1|CW480836 fsbb001f240b20f0 Sorghum methylation... 56 2e-005
gb|AW282791.1|AW282791 LG1_290_D05.g1_A002 Light Grown 1 (L... 56 2e-005
gb|BF586023.1|BF586023 FM1_33_F03.b1_A003 Floral-Induced Me... 56 2e-005
gb|BF587843.1|BF587843 FM1_33_F03.g1_A003 Floral-Induced Me... 56 2e-005
gb|BG947539.1|BG947539 IP1_5_G03.g1_A002 Immature pannicle ... 56 2e-005
gb|CD227780.1|CD227780 CCC1_53_B11.g1_A007 Callus culture/c... 56 2e-005
gb|CW335568.1|CW335568 104_834_11483110_148_36104_087 Sorgh... 54 1e-004
gb|BE918322.1|BE918322 OV1_2_A10.g1_A002 Ovary 1 (OV1) Sorg... 54 1e-004
gb|BG947780.1|BG947780 IP1_5_A08.b1_A002 Immature pannicle ... 54 1e-004
gb|BI076119.1|BI076119 IP1_25_A08.b1_A002 Immature pannicle... 54 1e-004
gb|BI076140.1|BI076140 IP1_26_A08.b1_A002 Immature pannicle... 54 1e-004
gb|BI141671.1|BI141671 IP1_55_E02.b1_A002 Immature pannicle... 54 1e-004
gb|CW031319.1|CW031319 104_259_10500738_114_30397 Sorghum m... 52 4e-004
gb|CW180606.1|CW180606 104_595_11163041_116_36639_075 Sorgh... 52 4e-004
gb|CW180607.1|CW180607 104_595_11163041_148_36643_075 Sorgh... 52 4e-004
gb|CW350793.1|CW350793 fsbb001f012e11f0 Sorghum methylation... 52 4e-004
gb|BG051145.1|BG051145 FM1_56_H02.b1_A003 Floral-Induced Me... 52 4e-004
gb|BG103164.1|BG103164 RHIZ2_18_H12.g1_A003 Rhizome2 (RHIZ2... 52 4e-004
gb|BG241497.1|BG241497 RHIZ2_50_A08.g1_A003 Rhizome2 (RHIZ2... 52 4e-004
gb|BG412467.1|BG412467 OV2_34_E11.g1_A002 Ovary 2 (OV2) Sor... 52 4e-004
gb|BI076320.1|BI076320 IP1_25_G03.g1_A002 Immature pannicle... 52 4e-004
gb|BI099525.1|BI099525 IP1_43_D01.g1_A002 Immature pannicle... 52 4e-004
gb|BZ423529.1|BZ423529 id50c12.g1 WGS-SbicolorF (DH5a methy... 50 0.002
gb|CW218309.1|CW218309 104_651_11196119_148_37457_082 Sorgh... 50 0.002
gb|CW344900.1|CW344900 104_847_11488203_116_36201_004 Sorgh... 50 0.002
gb|CW344901.1|CW344901 104_847_11488203_148_36202_004 Sorgh... 50 0.002
gb|BF481629.1|BF481629 FM1_20_D08.g1_A003 Floral-Induced Me... 50 0.002
gb|CF072531.1|CF072531 FE1_3_B12.b1_A002 Iron-deficient see... 50 0.002
gb|CF073359.1|CF073359 FE1_22_A05.g1_A002 Iron-deficient se... 50 0.002
gb|CF428798.1|CF428798 PH1_17_F11.g1_A002 Phosphorous-defic... 50 0.002
gb|CX621396.1|CX621396 GABR1_57_H04.g1_A002 GA- or brassino... 50 0.002
gb|CW382739.1|CW382739 fsbb001f064o11f0 Sorghum methylation... 48 0.006
gb|CW382740.1|CW382740 fsbb001f064o11k0 Sorghum methylation... 48 0.006
gb|CW496561.1|CW496561 fsbb001f288o02f0 Sorghum methylation... 48 0.006
gb|CW501227.1|CW501227 fsbb001f296p02k0 Sorghum methylation... 48 0.006
gb|CD212657.1|CD212657 HS1_6_E10.g1_A012 Heat-shocked seedl... 48 0.006
gb|CF073271.1|CF073271 FE1_22_H04.b1_A002 Iron-deficient se... 48 0.006
gb|CF074199.1|CF074199 FE1_21_C05.g1_A002 Iron-deficient se... 48 0.006
gb|CW113233.1|CW113233 104_487_11105330_148_34550_007 Sorgh... 46 0.023
gb|CW384220.1|CW384220 fsbb001f067c14k0 Sorghum methylation... 46 0.023
gb|CW430835.1|CW430835 fsbb001f144l18k0 Sorghum methylation... 46 0.023
gb|BE363036.1|BE363036 DG1_9_B09.b1_A002 Dark Grown 1 (DG1)... 46 0.023
gb|BF586500.1|BF586500 FM1_29_A05.g1_A003 Floral-Induced Me... 46 0.023
gb|BG103825.1|BG103825 RHIZ2_37_C06.b1_A003 Rhizome2 (RHIZ2... 46 0.023
gb|CW203375.1|CW203375 104_631_11185990_116_37062_095 Sorgh... 44 0.093
gb|BI245956.1|BI245956 IP1_65_G03.b1_A002 Immature pannicle... 44 0.093
gb|CW056573.1|CW056573 104_298_10517755_114_30151 Sorghum m... 42 0.37
gb|CW056574.1|CW056574 104_298_10517755_115_30157 Sorghum m... 42 0.37
gb|CW071795.1|CW071795 104_324_10591777_116_30462 Sorghum m... 42 0.37
gb|CW116979.1|CW116979 104_492_11107412_116_34607_066 Sorgh... 42 0.37
gb|CW236986.1|CW236986 104_693_11215917_148_37517_093 Sorgh... 42 0.37
gb|AW564329.1|AW564329 LG1_290_C06.b1_A002 Light Grown 1 (L... 42 0.37
gb|BE357266.1|BE357266 DG1_148_D12.b1_A002 Dark Grown 1 (DG... 42 0.37
gb|BF421722.1|BF421722 FM1_10_G10.b1_A003 Floral-Induced Me... 42 0.37
gb|CD213045.1|CD213045 HS1_28_B08.b1_A012 Heat-shocked seed... 42 0.37
>gb|CD423905.1|CD423905 SA1_2_G12.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_2_G12_A002 3', mRNA sequence
Length = 743
Score = 948 bits (478), Expect = 0.0
Identities = 671/731 (91%), Gaps = 12/731 (1%)
Strand = Plus / Minus
Query: 88 tattaacttacggataaagaccagcggaggtacatat---agcatatgtaattaacgtct 144
|||||||||| ||||||| |||||||||||||||||| | |||||||||||||| |||
Sbjct: 728 tattaacttatggataaacaccagcggaggtacatattacaacatatgtaattaacttct 669
Query: 145 cccgaccaagttcctaccatacta-----taaaaagagccacccactgataacttacgat 199
|||||||| ||||||| ||||||| || |||||||||||||| |||| ||||||
Sbjct: 668 cccgaccatgttcctagcatactacgtattagaaagagccacccacctataaattacgaa 609
Query: 200 gcacaatgcgt-ctagttccactctttaattatcttcagctcatcctagcagttgatgcc 258
|||||| || |||||||||||||||||| || |||||||||| |||||||||||||||
Sbjct: 608 --acaatgggtgctagttccactctttaat-atattcagctcattctagcagttgatgcc 552
Query: 259 acatttcgcgatatcaggaccagtgacccgggtggtgaatggatcgatacgaacccacat 318
|| || | || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 gcaattaccaattgggggaccagtgacccgggtggtgaatggatcgatacgaacccacag 492
Query: 319 cagggaaaagatcgacgcaaggaggatagcccagacaacgacaatggtcggcgtgcggtt 378
||||||||| ||||| ||||||||| ||||||| |||| ||||||||||||||||||||
Sbjct: 491 cagggaaaatatcgatgcaaggagggtagcccatacaagaacaatggtcggcgtgcggtt 432
Query: 379 ctgcttccccatgaggcccttgaggaaggggtacaggtggacaatcacccagaacgcaaa 438
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct: 431 ctgcttccccatgaggcccttgaggaaggggtacaagtggacaatcacccagaacgcgaa 372
Query: 439 gaagagcttcccgaaaagaggtccccatgactggtaaccgctattgattgcgtaggaaat 498
|||||||||||| |||||||| ||||||||||||||||| |||||||| || |||||| |
Sbjct: 371 gaagagcttcccaaaaagaggcccccatgactggtaaccactattgatcgcataggaagt 312
Query: 499 gccagcgaccacgccgaccaggttgatgatcaaaatagtggttggtgggatcagaagcgt 558
|||||| ||||| |||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 311 gccagcaaccacaccgatcaggttgataatcaaaatagtggttggtgggatcagaagcgt 252
Query: 559 tgtccacttgaacatgtagagctcggcaaaatcaccttcttcgtcagtggccttagaggt 618
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 251 tgtccacttgaacatgtagagctcggcaaaatcaccttcttcatcagtggccttagaggt 192
Query: 619 gacagtgaagctcgtgtcgataccagcaagcaccttcaggagaccctggaagacggcaaa 678
|||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 191 gacagtgaagctcgtgtcaataccagcaagcacctttaggagaccctggaagacggcaaa 132
Query: 679 taaatgcgcagaaataccaccaatgacccagaactgctcgttcctccaccattcatcaat 738
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 131 taaatgcgcagaaataccaccaataacccaaaactgctcgttcctccaccattcatcaat 72
Query: 739 gccaacaccactccacctcatctcaaggataccagtggcaaagattgagataaagagcga 798
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 71 gccaacaccactccacctcatctcaaggataccagtggcaaagatcgagataaagagcga 12
Query: 799 tataaaccaaa 809
|||||||||||
Sbjct: 11 tataaaccaaa 1
>gb|CW148395.1|CW148395 104_547_11141932_148_35011_016 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11141932, DNA
sequence
Length = 621
Score = 910 bits (459), Expect = 0.0
Identities = 580/619 (93%), Gaps = 1/619 (0%)
Strand = Plus / Plus
Query: 212 tagttccactctttaattatcttcagctcatcctagcagttgatgccacatttcgcgata 271
||||||||||||||||| || |||||||||| ||||||||||||||| || || | ||
Sbjct: 1 tagttccactctttaat-atattcagctcattctagcagttgatgccgcaattaccaatt 59
Query: 272 tcaggaccagtgacccgggtggtgaatggatcgatacgaacccacatcagggaaaagatc 331
||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 60 gggggaccagtgacccgggtggtgaatggatcgatacgaacccacagcagggaaaatatc 119
Query: 332 gacgcaaggaggatagcccagacaacgacaatggtcggcgtgcggttctgcttccccatg 391
|| ||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 120 gatgcaaggagggtagcccatacaagaacaatggtcggcgtgcggttctgcttccccatg 179
Query: 392 aggcccttgaggaaggggtacaggtggacaatcacccagaacgcaaagaagagcttcccg 451
|||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 180 aggcccttgaggaaggggtacaagtggacaatcacccagaacgcgaagaagagcttccca 239
Query: 452 aaaagaggtccccatgactggtaaccgctattgattgcgtaggaaatgccagcgaccacg 511
|||||||| ||||||||||||||||| |||||||| || |||||| ||||||| |||||
Sbjct: 240 aaaagaggcccccatgactggtaaccactattgatcgcataggaagtgccagcaaccaca 299
Query: 512 ccgaccaggttgatgatcaaaatagtggttggtgggatcagaagcgttgtccacttgaac 571
|||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ccgatcaggttgataatcaaaatagtggttggtgggatcagaagcgttgtccacttgaac 359
Query: 572 atgtagagctcggcaaaatcaccttcttcgtcagtggccttagaggtgacagtgaagctc 631
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 360 atgtagagctcggcaaaatcaccttcttcatcagtggccttagaggtgacagtgaagctc 419
Query: 632 gtgtcgataccagcaagcaccttcaggagaccctggaagacggcaaataaatgcgcagaa 691
||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 420 gtgtcaataccagcaagcacctttaggagaccctggaagacggcaaataaatgcgcagaa 479
Query: 692 ataccaccaatgacccagaactgctcgttcctccaccattcatcaatgccaacaccactc 751
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ataccaccaataacccaaaactgctcgttcctccaccattcatcaatgccaacaccactc 539
Query: 752 cacctcatctcaaggataccagtggcaaagattgagataaagagcgatataaaccaaaca 811
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 540 cacctcatctcaaggataccagtggcaaagatcgagataaagagcgatataaaccaaaca 599
Query: 812 ctctctaggttactaatct 830
||||| || ||||||||||
Sbjct: 600 ctctccagattactaatct 618
>gb|CF072057.1|CF072057 FE1_20_C10.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_20_C10_A002 3', mRNA sequence
Length = 666
Score = 793 bits (400), Expect = 0.0
Identities = 596/657 (90%), Gaps = 12/657 (1%)
Strand = Plus / Minus
Query: 88 tattaacttacggataaagaccagcggaggtacatat---agcatatgtaattaacgtct 144
|||||||||| ||||||| |||||||||||||||||| | |||||||||||||| |||
Sbjct: 654 tattaacttatggataaacaccagcggaggtacatattacaacatatgtaattaacttct 595
Query: 145 cccgaccaagttcctaccatacta-----taaaaagagccacccactgataacttacgat 199
|||||||| ||||||| ||||||| || |||||||||||||| |||| ||||||
Sbjct: 594 cccgaccatgttcctagcatactacgtattagaaagagccacccacctataaattacgaa 535
Query: 200 gcacaatgcgt-ctagttccactctttaattatcttcagctcatcctagcagttgatgcc 258
|||||| || |||||||||||||||||| || |||||||||| |||||||||||||||
Sbjct: 534 --acaatgggtgctagttccactctttaat-atattcagctcattctagcagttgatgcc 478
Query: 259 acatttcgcgatatcaggaccagtgacccgggtggtgaatggatcgatacgaacccacat 318
|| || | || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 gcaattaccaattgggggaccagtgacccgggtggtgaatggatcgatacgaacccacag 418
Query: 319 cagggaaaagatcgacgcaaggaggatagcccagacaacgacaatggtcggcgtgcggtt 378
||||||||| ||||| ||||||||| ||||||| |||| ||||||||||| ||||||||
Sbjct: 417 cagggaaaatatcgatgcaaggagggtagcccatacaagaacaatggtcggtgtgcggtt 358
Query: 379 ctgcttccccatgaggcccttgaggaaggggtacaggtggacaatcacccagaacgcaaa 438
||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||
Sbjct: 357 ctgcttccccatgaggcccttgaggaaggggtacaagtggacagtcacccagaacgcgaa 298
Query: 439 gaagagcttcccgaaaagaggtccccatgactggtaaccgctattgattgcgtaggaaat 498
|||||||||||| |||||||| ||||||||||||||||| |||||||| || |||||| |
Sbjct: 297 gaagagcttcccaaaaagaggcccccatgactggtaaccactattgatcgcataggaagt 238
Query: 499 gccagcgaccacgccgaccaggttgatgatcaaaatagtggttggtgggatcagaagcgt 558
|||||| ||||| |||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 237 gccagcaaccacaccgatcaggttgataatcaaaatagtggttggtgggatcagaagcgt 178
Query: 559 tgtccacttgaacatgtagagctcggcaaaatcaccttcttcgtcagtggccttagaggt 618
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 177 tgtccacttgaacatgtagagctcggcaaaatcaccttcttcatcagtggccttagaggt 118
Query: 619 gacagtgaagctcgtgtcgataccagcaagcaccttcaggagaccctggaagacggcaaa 678
|||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 117 gacagtgaagctcgtgtcaataccagcaagcacctttaggagaccctggaagacggcaaa 58
Query: 679 taaatgcgcagaaataccaccaatgacccagaactgctcgttcctccaccattcatc 735
|||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 57 taaatgcgcagaaataccaccaataacccaaaactgctcgttcctccaccattcatc 1
>gb|BG948758.1|BG948758 LG1_330_A01.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 457
Score = 773 bits (390), Expect = 0.0
Identities = 432/446 (96%)
Strand = Plus / Minus
Query: 1043 cgatccgaaaggttgataggagcagatcccttgaaagctggtcgcttaggcatgcagtag 1102
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 454 cgatccgaaaggttgataggagcagatcccttgacagctggtcgcttaggcatgcagtag 395
Query: 1103 attgatcgccagcctcgagcatgcatcttgaatccggtgagaatgtcttctgtaacagaa 1162
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 394 attgatcgccagcctcgagcatgcatcttgaatccagtgagaatatcttctgtaacagaa 335
Query: 1163 ccatagatccacccaatctcagttccccagtcagttttgtcctcatagccacagctgatg 1222
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ccatagatccatccgatctcagttccccagtcagttttgtcctcatagccacagctgatg 275
Query: 1223 acatgaatagcttctttcagaagagactctggagttgcagattgtggaacaccgccatat 1282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 acatgaatagcttctttcagaagagactctggagttgcagattgtggaacaccgccatat 215
Query: 1283 tccatcagagtagaggctacaaaaacactggactggccaaatctcttctccaagctcatt 1342
||||| || || |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 214 tccataagggtggaggctacaaaaacactggactggccaaatctcttctccaggctcatt 155
Query: 1343 tgagacataatcagcgatttctcatcatcaaactgagaaccttcaatcccttcctctata 1402
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 154 tgagacataatcagcgatttctcatcatcaaattgagaaccttcaatcccttcctctata 95
Query: 1403 tcttcgagattaaatactggtacagaactgtctgcgtgtctatgtgacttcttcttttcc 1462
||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 94 tcttcaagattaaatactggtacagaactgtctgcgtgtctgtgtgacttcttcttttct 35
Query: 1463 gagctcttcttagattttgacgtctt 1488
|||||||||||||| |||||||||||
Sbjct: 34 gagctcttcttagactttgacgtctt 9
>gb|BE598881.1|BE598881 PI1_83_C07.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 473
Score = 767 bits (387), Expect = 0.0
Identities = 445/465 (95%)
Strand = Plus / Minus
Query: 1882 ttggaatccaggacgtttttcacgagacacataaaccaaacgaggaagttcattgccttc 1941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 473 ttggaatccaggacgtttttcacgagacacataaaccaaacgaggaagttcattgccgtc 414
Query: 1942 aacgtcaagccctccactgtgacccaggaaaacctgaatcattccaggatggtccctagt 2001
||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 413 aacgtcaaggcctccactgtgacntaggaaaacctgaatcattccaggatggtccctagt 354
Query: 2002 attgttcccaggccaaggtgtaccatcttgcatgatccatccctcctcgggaactttttg 2061
||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 353 attgttcncaggccaaggtgtaccatcttgcatgatccatccctcctcaggaactttttg 294
Query: 2062 tgcattggctacaagaccattgatacgaactttgaattcttcatattctctcttcatggc 2121
||| |||||||| || |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 293 tgccttggctactagggcattgatacggactttgaattcttcatattctctcttcatggc 234
Query: 2122 ccggcgttctttcacaaatgaagtttgaactttgtctttcaagtaatcaattttctgagc 2181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 ccggcgttctttcacaaatgaagtttgaactttgtctttcaagtaatcaattttctgagc 174
Query: 2182 aaagtaccattccggagccctaggctctatgttgtacttcttacagaacggaacccattt 2241
||||||||| || || |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 173 aaagtaccactctggggccctaggctctatgttgtacttcttacagaatggaacccattt 114
Query: 2242 tctagcaaactctgaagtttcagagagagcatcaaaagtcagcatagcagctccatcatc 2301
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 113 tctagcaaactctgaagtttcagagagcgcatcaaaagtcagcatagcagccccatcatc 54
Query: 2302 cgaaacatagcaagataccttgtcaaccggataatcgacagcaag 2346
|||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 53 agaaacatagcaagataccttgtcaaccggatagtcaacagcaag 9
>gb|CD211954.1|CD211954 HS1_67_A05.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_67_A05_A012 5', mRNA sequence
Length = 646
Score = 664 bits (335), Expect = 0.0
Identities = 392/411 (95%)
Strand = Plus / Minus
Query: 3060 tgtcatacttcccatgcccaatttcaccgctgtcatacttagccaggccaatatcactgc 3119
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 646 tgtcatacttcccatgcccaatctcaccactgtcatacttagccaggccaatatcactgc 587
Query: 3120 cacgtgagtttgtccgccaagtgagcattctctcagcaatcttttgcttctgatcctggt 3179
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 586 cacgtgagtttgtccgccaggtgagcattctctcagcaatcttttgcttctggtcctggt 527
Query: 3180 tgccagatgcttggtagttgtagtcactcacatcgtcagcatccacatcctcattttcct 3239
|||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 526 tgccggatgcttggtagttgtagtcactcacatcatcagcatccacatcctcattttcct 467
Query: 3240 caccgtgtactggtgggctccctttgtggcgcttgtacttagtcttgcactgcgggcacg 3299
|||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||
Sbjct: 466 caccgtgtactggtgggctccccttgtgacgcttgtacttggtcttgcactgcgggcacg 407
Query: 3300 cctgggtgccgtccttgcgctcgtactcgtagcatgggcggcacacggggaagccgcaga 3359
|||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||
Sbjct: 406 cctgggtgccgtccttgcgctcgtactcgtagcagggccggcacactgggaagccgcaga 347
Query: 3360 cgtcgcaggcggtgaagaggtcgccgtccgccgcggtgcccacgccgtcgccgcagatct 3419
||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 346 cgtcgcaggcggtgaagagctcgccgtccgccgcggtgcccacgccatcgccgcagatct 287
Query: 3420 ggcacacctgcccggccacatgcttccccgaattcgtggcgtcgccgccgt 3470
||||||| ||||||||| |||||||||| ||||||| |||||||||||||
Sbjct: 286 ggcacacatgcccggccccatgcttcccagaattcgcagcgtcgccgccgt 236
Score = 145 bits (73), Expect = 3e-032
Identities = 113/125 (90%), Gaps = 1/125 (0%)
Strand = Plus / Minus
Query: 3462 cgccgccgtccatggcgcaccaatccgagccctccacgagttcacaaacgccggaccccc 3521
|||| ||||||||||||| ||||||||||||||||||| |||||||| |||||||||||
Sbjct: 232 cgccaccgtccatggcgcgccaatccgagccctccacg-gttcacaacggccggaccccc 174
Query: 3522 gccgactcaccgcattcctcggcttcccctcccgcgtgccggcgccgaatcgcccccggg 3581
||| ||||||||||||||||||||||||||||||| || |||| |||||||| |||||
Sbjct: 173 accgcctcaccgcattcctcggcttcccctcccgcgcaccagcgcggaatcgcctccggg 114
Query: 3582 ctcgc 3586
|||||
Sbjct: 113 ctcgc 109
Score = 52.0 bits (26), Expect = 4e-004
Identities = 53/62 (85%), Gaps = 5/62 (8%)
Strand = Plus / Minus
Query: 3625 gtggcagtggccctaacccagtg-----ttcacctcgcgcaggagcaagtggtggagctc 3679
||||||||||| ||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 64 gtggcagtggcgctaacccagtgctcacctcacctcgcgcgggagcaagtggcggagctc 5
Query: 3680 gc 3681
||
Sbjct: 4 gc 3
>gb|AW286294.1|AW286294 LG1_330_A01.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 538
Score = 581 bits (293), Expect = e-163
Identities = 468/522 (89%), Gaps = 12/522 (2%)
Strand = Plus / Minus
Query: 88 tattaacttacggataaagaccagcggaggtacatat---agcatatgtaattaacgtct 144
|||||||||| ||||||| |||||||||||||||||| | |||||||||||||| |||
Sbjct: 522 tattaacttatggataaacaccagcggaggtacatattacaacatatgtaattaacttct 463
Query: 145 cccgaccaagttcctaccatacta-----taaaaagagccacccactgataacttacgat 199
|||||||| ||||||| ||||||| || |||||||||||||| |||| ||||||
Sbjct: 462 cccgaccatgttcctagcatactacgtattagaaagagccacccacctataaattacgaa 403
Query: 200 gcacaatgcgt-ctagttccactctttaattatcttcagctcatcctagcagttgatgcc 258
|||||| || |||||||||||||||||| || |||||||||| |||||||||||||||
Sbjct: 402 --acaatgggtgctagttccactctttaat-atattcagctcattctagcagttgatgcc 346
Query: 259 acatttcgcgatatcaggaccagtgacccgggtggtgaatggatcgatacgaacccacat 318
|| || | || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gcaattaccaattgggggaccagtgacccgggtggtgaatggatcgatacgaacccacag 286
Query: 319 cagggaaaagatcgacgcaaggaggatagcccagacaacgacaatggtcggcgtgcggtt 378
||||||||| ||||| ||||||||| ||||||| |||| ||||||||||||||||||||
Sbjct: 285 cagggaaaatatcgatgcaaggagggtagcccatacaagaacaatggtcggcgtgcggtt 226
Query: 379 ctgcttccccatgaggcccttgaggaaggggtacaggtggacaatcacccagaacgcaaa 438
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct: 225 ctgcttccccatgaggcccttgaggaaggggtacaagtggacaatcacccagaacgcgaa 166
Query: 439 gaagagcttcccgaaaagaggtccccatgactggtaaccgctattgattgcgtaggaaat 498
|||||||||||| |||||||| ||||||||||||||||| |||||||| || |||||| |
Sbjct: 165 gaagagcttcccaaaaagaggcccccatgactggtaaccactattgatcgcataggaagt 106
Query: 499 gccagcgaccacgccgaccaggttgatgatcaaaatagtggttggtgggatcagaagcgt 558
|||||| ||||| |||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 105 gccagcaaccacaccgatcaggttgataatcaaaatagtggttggtgggatcagaagcgt 46
Query: 559 tgtccacttgaacatgtagagctcggcaaaatcaccttcttc 600
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45 tgtccacttgaacatgtagagctcggcaaaatcaccttcttc 4
>gb|BE598541.1|BE598541 PI1_83_C07.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 400
Score = 577 bits (291), Expect = e-162
Identities = 357/379 (94%)
Strand = Plus / Minus
Query: 275 ggaccagtgacccgggtggtgaatggatcgatacgaacccacatcagggaaaagatcgac 334
||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 379 ggaccagtgacccgggtggtgaatggatcgatacgaacccacagcagggaaaatatcgat 320
Query: 335 gcaaggaggatagcccagacaacgacaatggtcggcgtgcggttctgcttccccatgagg 394
||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 319 gcaaggagggtagcccatacaagaacaatggtcggcgtgcggttctgcttccccatgagg 260
Query: 395 cccttgaggaaggggtacaggtggacaatcacccagaacgcaaagaagagcttcccgaaa 454
||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||
Sbjct: 259 cccttgaggaaggggtacaagtggacaatcacccagaacgcgaagaagagcttcccaaaa 200
Query: 455 agaggtccccatgactggtaaccgctattgattgcgtaggaaatgccagcgaccacgccg 514
||||| ||||||||||||||||| |||||||| || |||||| ||||||| ||||| |||
Sbjct: 199 agaggcccccatgactggtaaccactattgatcgcataggaagtgccagcaaccacaccg 140
Query: 515 accaggttgatgatcaaaatagtggttggtgggatcagaagcgttgtccacttgaacatg 574
| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 139 atcaggttgataatcaaaatagtggttggtgggatcagaagagttgtccacttgaacatg 80
Query: 575 tagagctcggcaaaatcaccttcttcgtcagtggccttagaggtgacagtgaagctcgtg 634
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 79 tagagctcggcaaaatcaccttcttcatcagtggccttagaggtgacagtgaagctcgtg 20
Query: 635 tcgataccagcaagcacct 653
|| ||||||||||||||||
Sbjct: 19 tcaataccagcaagcacct 1
>gb|CD211868.1|CD211868 HS1_67_A05.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_67_A05_A012 3', mRNA sequence
Length = 539
Score = 557 bits (281), Expect = e-156
Identities = 465/522 (89%), Gaps = 12/522 (2%)
Strand = Plus / Minus
Query: 88 tattaacttacggataaagaccagcggaggtacatat---agcatatgtaattaacgtct 144
|||||||||| ||||||| |||||||||||||||||| | |||||||||||||| |||
Sbjct: 522 tattaacttatggataaacaccagcggaggtacatattacaacatatgtaattaacttct 463
Query: 145 cccgaccaagttcctaccatacta-----taaaaagagccacccactgataacttacgat 199
|||||||| |||||| ||||||| ||||||||||||||||| |||| ||||||
Sbjct: 462 cccgaccatattcctagcatactacgtattaaaaagagccacccacctataaattacgaa 403
Query: 200 gcacaatgcgt-ctagttccactctttaattatcttcagctcatcctagcagttgatgcc 258
|||||| | |||||||||||||||||| || |||||||||| |||||||||||||||
Sbjct: 402 --acaatgggggctagttccactctttaat-atattcagctcattctagcagttgatgcc 346
Query: 259 acatttcgcgatatcaggaccagtgacccgggtggtgaatggatcgatacgaacccacat 318
|| || | || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gcaattaccaattgggggaccagtgacccgggtggtgaatggatcgatacgaacccacag 286
Query: 319 cagggaaaagatcgacgcaaggaggatagcccagacaacgacaatggtcggcgtgcggtt 378
||||||||| ||||| ||||||||| ||||||| |||| ||||||||||||||||||||
Sbjct: 285 cagggaaaatatcgatgcaaggagggtagcccatacaaaaacaatggtcggcgtgcggtt 226
Query: 379 ctgcttccccatgaggcccttgaggaaggggtacaggtggacaatcacccagaacgcaaa 438
||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||
Sbjct: 225 ctgcttccccatgaggcccttgaggaaggggtacaagtggacaatcacccaaaacgcgaa 166
Query: 439 gaagagcttcccgaaaagaggtccccatgactggtaaccgctattgattgcgtaggaaat 498
|||||||||||| |||||||| ||||||||||||||||| |||||||| || |||||| |
Sbjct: 165 gaagagcttcccaaaaagaggcccccatgactggtaaccactattgatcgcataggaagt 106
Query: 499 gccagcgaccacgccgaccaggttgatgatcaaaatagtggttggtgggatcagaagcgt 558
|||||| ||||| |||| ||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 105 gccagcaaccacaccgatcaggttgataatcaaaatagtggttggtgggatcaaaagcgt 46
Query: 559 tgtccacttgaacatgtagagctcggcaaaatcaccttcttc 600
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45 tgtccacttgaacatgtagagctcggcaaaatcaccttcttc 4
>gb|CW148394.1|CW148394 104_547_11141932_116_35015_016 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11141932, DNA
sequence
Length = 668
Score = 553 bits (279), Expect = e-155
Identities = 297/303 (98%)
Strand = Plus / Minus
Query: 829 ctttgggatgatgaacttcccagtgagaagacaaactgctggcaatatgcagtacaggag 888
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 303 ctttgggatgatgaacttcccagtgagaaggcaaactgctggcaatatgcagtacaggag 244
Query: 889 gagcgggattgatgtgagtggataaattgttgtgttgatataagcaaatctctccaggaa 948
||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 243 cagcgggattgatgtgaggggataaattgttgtgttaatataagcaaatctctccagaaa 184
Query: 949 tttaagccgacctccatagccataccatatgggacaatgcctgctgaaaagaatttcaat 1008
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 tttaagccgtcctccatagccataccatatgggacaatgcctgctgaaaagaatttcaat 124
Query: 1009 ggaaccaagagcccaccgaagcacttgattcaaacgatccgaaaggttgataggagcaga 1068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ggaaccaagagcccaccgaagcacttgattcaaacgatccgaaaggttgataggagcaga 64
Query: 1069 tcccttgaaagctggtcgcttaggcatgcagtagattgatcgccagcctcgagcatgcat 1128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tcccttgaaagctggtcgcttaggcatgcagtagattgatcgccagcctcgagcatgcat 4
Query: 1129 ctt 1131
|||
Sbjct: 3 ctt 1
Score = 502 bits (253), Expect = e-139
Identities = 277/285 (97%)
Strand = Plus / Minus
Query: 546 ggatcagaagcgttgtccacttgaacatgtagagctcggcaaaatcaccttcttcgtcag 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 668 ggatcagaagcgttgtccacttgaacatgtagagctcggcaaaatcaccttcttcatcag 609
Query: 606 tggccttagaggtgacagtgaagctcgtgtcgataccagcaagcaccttcaggagaccct 665
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 608 tggccttagaggtgacagtgaagctcgtgtcaataccagcaagcacctttaggagaccct 549
Query: 666 ggaagacggcaaataaatgcgcagaaataccaccaatgacccagaactgctcgttcctcc 725
||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 548 ggaagacggcaaataaatgcgcagaaataccaccaataacccaaaactgctcgttcctcc 489
Query: 726 accattcatcaatgccaacaccactccacctcatctcaaggataccagtggcaaagattg 785
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 488 accattcatcaatgccaacaccactccacctcatctcaaggataccagtggcaaagatcg 429
Query: 786 agataaagagcgatataaaccaaacactctctaggttactaatct 830
||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 428 agataaagagcgatataaaccaaacactctccagattactaatct 384
>gb|CD220053.1|CD220053 CCC1_60_F06.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_60_F06_A007 5', mRNA sequence
Length = 639
Score = 545 bits (275), Expect = e-152
Identities = 527/611 (86%)
Strand = Plus / Minus
Query: 764 aggataccagtggcaaagattgagataaagagcgatataaaccaaacactctctaggtta 823
||||||||||||||||| ||||| |||||||| || || ||||||| ||| | | |||
Sbjct: 637 aggataccagtggcaaaaattgaaataaagagagaaatgaaccaaatactagcgaagttg 578
Query: 824 ctaatctttgggatgatgaacttcccagtgagaagacaaactgctggcaatatgcagtac 883
||||||| ||| |||||||| || |||||||| ||||| | || |||| || || ||
Sbjct: 577 ctaatctctggaatgatgaattttccagtgagcagacagatggcaggcagaatacaataa 518
Query: 884 aggaggagcgggattgatgtgagtggataaattgttgtgttgatataagcaaatctctcc 943
| ||| || ||||| |||||||| || ||||| || |||||||| |||||||||||||||
Sbjct: 517 atgagaagtgggatagatgtgagcgggtaaatggtggtgttgatgtaagcaaatctctcc 458
Query: 944 aggaatttaagccgacctccatagccataccatatgggacaatgcctgctgaaaagaatt 1003
| ||| || || || ||||||||||| ||||||| ||| ||||||| |||||||||||||
Sbjct: 457 aagaacttcaggcgtcctccatagccgtaccataaggggcaatgccggctgaaaagaatt 398
Query: 1004 tcaatggaaccaagagcccaccgaagcacttgattcaaacgatccgaaaggttgatagga 1063
|| | ||||||||||||||||| |||||||| |||| |||||| ||||| ||||| |||
Sbjct: 397 tccacagaaccaagagcccaccggagcacttggttcagacgatctgaaagattgatggga 338
Query: 1064 gcagatcccttgaaagctggtcgcttaggcatgcagtagattgatcgccagcctcgagca 1123
|||||||||||||||||||| ||||||||||||||||| || || ||||||||||| ||
Sbjct: 337 gcagatcccttgaaagctggccgcttaggcatgcagtaaatcgaccgccagcctcgtgcg 278
Query: 1124 tgcatcttgaatccggtgagaatgtcttctgtaacagaaccatagatccacccaatctca 1183
|||||||||||||| || ||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 277 tgcatcttgaatccagtaagaatatcttctgtcacagaaccatagatccacccaatctca 218
Query: 1184 gttccccagtcagttttgtcctcatagccacagctgatgacatgaatagcttctttcaga 1243
|||||||| ||||| ||||||||||||||||| || || ||||| |||||||||||||||
Sbjct: 217 gttccccattcagtcttgtcctcatagccacaacttataacatggatagcttctttcaga 158
Query: 1244 agagactctggagttgcagattgtggaacaccgccatattccatcagagtagaggctaca 1303
||||| || ||||||||||| || |||||||| ||||||||||||||||| ||||| |||
Sbjct: 157 agagattccggagttgcagactgaggaacaccaccatattccatcagagtggaggcaaca 98
Query: 1304 aaaacactggactggccaaatctcttctccaagctcatttgagacataatcagcgatttc 1363
||| | ||| || |||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 97 aaagctgcggattgaccaaatctcttctccaagctcatttgagacataagaagtgatttc 38
Query: 1364 tcatcatcaaa 1374
|||||||||||
Sbjct: 37 tcatcatcaaa 27
>gb|BG103131.1|BG103131 RHIZ2_18_E07.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 669
Score = 478 bits (241), Expect = e-132
Identities = 489/569 (85%), Gaps = 2/569 (0%)
Strand = Plus / Minus
Query: 242 tcctagcagttgatgccacat-ttcgcgatatcaggaccagtgacccgggtggtgaatgg 300
||||||||||||||||||||| || | | |||| || |||||||| ||||||||||| ||
Sbjct: 572 tcctagcagttgatgccacatgtttgag-tatctgggccagtgacacgggtggtgaacgg 514
Query: 301 atcgatacgaacccacatcagggaaaagatcgacgcaaggaggatagcccagacaacgac 360
||||| |||||||||| || ||| ||||||||||| | ||||| ||||||||||| ||
Sbjct: 513 gtcgatgcgaacccacagcaaggagaagatcgacgccaacaggattgcccagacaaccac 454
Query: 361 aatggtcggcgtgcggttctgcttccccatgaggcccttgaggaaggggtacaggtggac 420
|||||||| |||||||| ||| |||||||| ||||||||||| ||||||| ||| ||
Sbjct: 453 gatggtcggggtgcggttttgccgacccatgagacccttgaggaatgggtacaagtgcac 394
Query: 421 aatcacccagaacgcaaagaagagcttcccgaaaagaggtccccatgactggtaaccgct 480
|||||||||||| || ||||||||||| || || || || |||||||| |||||||||||
Sbjct: 393 aatcacccagaaggcgaagaagagcttgccaaagagtgggccccatgattggtaaccgct 334
Query: 481 attgattgcgtaggaaatgccagcgaccacgccgaccaggttgatgatcaaaatagtggt 540
||||| || ||||| || ||||| || || || |||||||||||||||| ||| || ||
Sbjct: 333 gttgatcgcataggagataccagcaacaacaccaaccaggttgatgatcagaatggtcgt 274
Query: 541 tggtgggatcagaagcgttgtccacttgaacatgtagagctcggcaaaatcaccttcttc 600
||| ||||||||||| |||||||||||||||||||| ||||| ||||| ||||| |||||
Sbjct: 273 tggcgggatcagaagggttgtccacttgaacatgtacagctccgcaaagtcaccgtcttc 214
Query: 601 gtcagtggccttagaggtgacagtgaagctcgtgtcgataccagcaagcaccttcaggag 660
|| | |||||| ||||||||||||||| | ||||||||||||||||||||||| |||||
Sbjct: 213 atctgaggcctttgaggtgacagtgaagttggtgtcgataccagcaagcaccttgaggag 154
Query: 661 accctggaagacggcaaataaatgcgcagaaataccaccaatgacccagaactgctcgtt 720
||||||||||||||| || | || ||||| ||||| |||||||||||||| || || ||
Sbjct: 153 accctggaagacggcgaaaaggtgggcagagatacctccaatgacccagaattgttcatt 94
Query: 721 cctccaccattcatcaatgccaacaccactccacctcatctcaaggataccagtggcaaa 780
||||||||| || ||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 93 cctccaccactcgtcaattccaacaccactccacctcatctcgaggataccagtggcaaa 34
Query: 781 gattgagataaagagcgatataaaccaaa 809
||||| |||||||| || || |||||||
Sbjct: 33 aattgaaataaagagagaaatgaaccaaa 5
>gb|CN127278.1|CN127278 RHOH1_22_C03.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_22_C03_A002 3', mRNA sequence
Length = 857
Score = 416 bits (210), Expect = e-114
Identities = 446/522 (85%), Gaps = 2/522 (0%)
Strand = Plus / Minus
Query: 242 tcctagcagttgatgccacat-ttcgcgatatcaggaccagtgacccgggtggtgaatgg 300
||||||||||||||||||||| || | | |||| || |||||||| ||||||||||| ||
Sbjct: 523 tcctagcagttgatgccacatgtttgag-tatctgggccagtgacacgggtggtgaacgg 465
Query: 301 atcgatacgaacccacatcagggaaaagatcgacgcaaggaggatagcccagacaacgac 360
|| || |||||||||| || ||| ||||| || || | ||||| ||||||||||| ||
Sbjct: 464 gtctatgcgaacccacagcaaggagaagattgatgccaacaggattgcccagacaaccac 405
Query: 361 aatggtcggcgtgcggttctgcttccccatgaggcccttgaggaaggggtacaggtggac 420
|||||||| |||||||| ||| |||||||| || |||||||| ||||||| ||| ||
Sbjct: 404 gatggtcggggtgcggttttgccgacccatgagacctttgaggaatgggtacaagtgcac 345
Query: 421 aatcacccagaacgcaaagaagagcttcccgaaaagaggtccccatgactggtaaccgct 480
|||||||||||| || ||||||||||| || || || || |||||||| |||||||||||
Sbjct: 344 aatcacccagaaggcgaagaagagcttgccaaagagcgggccccatgattggtaaccgct 285
Query: 481 attgattgcgtaggaaatgccagcgaccacgccgaccaggttgatgatcaaaatagtggt 540
||||| |||||||| || ||||| || || || |||||||||||||||| ||| || ||
Sbjct: 284 gttgatcgcgtaggagataccagcaacaacaccaaccaggttgatgatcagaatggtcgt 225
Query: 541 tggtgggatcagaagcgttgtccacttgaacatgtagagctcggcaaaatcaccttcttc 600
|||||||||||||||||||||||||||||||||||| ||||| ||||| ||||| |||||
Sbjct: 224 tggtgggatcagaagcgttgtccacttgaacatgtacagctccgcaaagtcaccgtcttc 165
Query: 601 gtcagtggccttagaggtgacagtgaagctcgtgtcgataccagcaagcaccttcaggag 660
|| | |||||| ||||||||||||||| | ||||||||||| ||||||||||| |||||
Sbjct: 164 atctgaggcctttgaggtgacagtgaagttggtgtcgataccggcaagcaccttgaggag 105
Query: 661 accctggaagacggcaaataaatgcgcagaaataccaccaatgacccagaactgctcgtt 720
||||||||||||||| || | || ||||| ||||| |||||||||||||| || || ||
Sbjct: 104 accctggaagacggcgaaaaggtgggcagagatacctccaatgacccagaattgttcatt 45
Query: 721 cctccaccattcatcaatgccaacaccactccacctcatctc 762
||||||||| || ||||| |||||||||||||||||||||||
Sbjct: 44 cctccaccactcgtcaattccaacaccactccacctcatctc 3
>gb|BI245743.1|BI245743 IP1_63_G04.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 455
Score = 387 bits (195), Expect = e-105
Identities = 386/447 (86%), Gaps = 2/447 (0%)
Strand = Plus / Minus
Query: 2003 ttgttcccaggccaaggtgtaccatcttgcatgatccatccctcctcgggaactttttgt 2062
||||| || ||||| ||||| |||||||||||||||||||| ||||| |||||||| |||
Sbjct: 455 ttgtttcctggccatggtgtgccatcttgcatgatccatccttcctcaggaactttctgt 396
Query: 2063 gcattggctacaagaccattgatacgaactttgaattcttcatattctctcttcatggcc 2122
|| || || ||||| ||||| || | |||||||||||||||||||||||||||||||||
Sbjct: 395 gccttagcaacaaggccatttatcctaactttgaattcttcatattctctcttcatggct 336
Query: 2123 cggcgttctttcacaaatgaagtttgaactttgtctttcaagtaatcaattttctgagca 2182
||||| ||||| |||||||||| || |||||||| |||||||||||||||||||| |||
Sbjct: 335 cggcggtctttaacaaatgaagggtgcactttgtccttcaagtaatcaattttctg-gca 277
Query: 2183 -aagtaccattccggagccctaggctctatgttgtacttcttacagaacggaacccattt 2241
||||||||||| ||||| ||||| || ||||||||||||||| || || ||||||||
Sbjct: 276 gaagtaccattcaggagctctaggttcaatgttgtacttcttaacaaatggtacccattt 217
Query: 2242 tctagcaaactctgaagtttcagagagagcatcaaaagtcagcatagcagctccatcatc 2301
|||||||||||||||||| |||| || |||||||| |||||||| ||||||||||||||
Sbjct: 216 tctagcaaactctgaagtctcagctagtgcatcaaatgtcagcattgcagctccatcatc 157
Query: 2302 cgaaacatagcaagataccttgtcaaccggataatcgacagcaaggatggaaagcacagt 2361
|| ||||||||||| ||||| || || || ||||| |||||||| ||||| ||||| ||
Sbjct: 156 agatacatagcaagagaccttatccacagggtaatccacagcaagaatggatagcacggt 97
Query: 2362 atttgcagtgacaagaggaggctccttcataggatccacagtactgacaaagatatcaac 2421
||| ||||| |||||||||||||||||||| || || || |||||||| || || |||||
Sbjct: 96 attggcagtaacaagaggaggctccttcattgggtcgactgtactgacgaaaatgtcaac 37
Query: 2422 aggagctaattgagatggttcaccttc 2448
|| ||| || |||||||||||||||||
Sbjct: 36 agcagccaactgagatggttcaccttc 10
>gb|CN128917.1|CN128917 RHOH1_32_H10.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_32_H10_A002 3', mRNA sequence
Length = 785
Score = 381 bits (192), Expect = e-103
Identities = 440/520 (84%), Gaps = 2/520 (0%)
Strand = Plus / Minus
Query: 242 tcctagcagttgatgccacat-ttcgcgatatcaggaccagtgacccgggtggtgaatgg 300
||||||||||||||||||||| || | | |||| || |||||||| ||||||||||| ||
Sbjct: 519 tcctagcagttgatgccacatgtttgag-tatctgggccagtgacacgggtggtgaacgg 461
Query: 301 atcgatacgaacccacatcagggaaaagatcgacgcaaggaggatagcccagacaacgac 360
|| || |||||||||| || ||| ||||| || || | ||||| ||||||||||| ||
Sbjct: 460 gtctatgcgaacccacagcaaggagaagattgatgccaacaggattgcccagacaaccac 401
Query: 361 aatggtcggcgtgcggttctgcttccccatgaggcccttgaggaaggggtacaggtggac 420
|||||||| |||||||| ||| |||||||| || |||||||| ||||||| ||| ||
Sbjct: 400 gatggtcggggtgcggttttgccgacccatgagacctttgaggaatgggtacaagtgcac 341
Query: 421 aatcacccagaacgcaaagaagagcttcccgaaaagaggtccccatgactggtaaccgct 480
||||||||| || || ||||| ||||| || || || || |||||||| |||||||||||
Sbjct: 340 aatcacccaaaaggcgaagaaaagcttgccaaagagcgggccccatgattggtaaccgct 281
Query: 481 attgattgcgtaggaaatgccagcgaccacgccgaccaggttgatgatcaaaatagtggt 540
||||| |||||||| || ||||| || || || |||||||||||||||| ||| || ||
Sbjct: 280 gttgatcgcgtaggagataccagcaacaacaccaaccaggttgatgatcagaatggtcgt 221
Query: 541 tggtgggatcagaagcgttgtccacttgaacatgtagagctcggcaaaatcaccttcttc 600
|||||||||||||| ||||||||||||||||||||| ||||| ||||| ||||| |||||
Sbjct: 220 tggtgggatcagaaacgttgtccacttgaacatgtacagctccgcaaagtcaccgtcttc 161
Query: 601 gtcagtggccttagaggtgacagtgaagctcgtgtcgataccagcaagcaccttcaggag 660
|| | |||||| |||||||||||||| | ||||||||||| ||||||||||| |||||
Sbjct: 160 atctgaggcctttgaggtgacagtgaaattggtgtcgataccggcaagcaccttgaggag 101
Query: 661 accctggaagacggcaaataaatgcgcagaaataccaccaatgacccagaactgctcgtt 720
||||||||||||||| || | || ||||| ||||| |||||||||||||| || || ||
Sbjct: 100 accctggaagacggcgaaaaggtgggcagagatacctccaatgacccagaattgttcatt 41
Query: 721 cctccaccattcatcaatgccaacaccactccacctcatc 760
||||||||| || ||||| |||||||||||||||||||||
Sbjct: 40 cctccaccactcgtcaattccaacaccactccacctcatc 1
>gb|CW213542.1|CW213542 104_645_11191609_148_37039_013 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11191609, DNA
sequence
Length = 289
Score = 367 bits (185), Expect = 5e-099
Identities = 209/217 (96%)
Strand = Plus / Minus
Query: 614 gaggtgacagtgaagctcgtgtcgataccagcaagcaccttcaggagaccctggaagacg 673
||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 289 gaggtgacagtgaagctcgtgtcaataccagcaagcaccttagggagaccctggaagacg 230
Query: 674 gcaaataaatgcgcagaaataccaccaatgacccagaactgctcgttcctccaccattca 733
||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 229 gcaaataaatgcgcagaaataccaccaataacccaaaactgctcgttcctccaccattca 170
Query: 734 tcaatgccaacaccactccacctcatctcaaggataccagtggcaaagattgagataaag 793
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 169 tcaatgccaacaccactccacctcatctcaaggataccagtggcaaagatcgagataaag 110
Query: 794 agcgatataaaccaaacactctctaggttactaatct 830
||||||||||||||||||||||| || ||||||||||
Sbjct: 109 agcgatataaaccaaacactctccagattactaatct 73
>gb|BI140951.1|BI140951 IP1_41_C08.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 226
Score = 335 bits (169), Expect = 2e-089
Identities = 203/217 (93%)
Strand = Plus / Minus
Query: 1481 gacgtctttttccttcccccacaaagcgaagagaagaagcctggcnnnnnnnncttgact 1540
|||||||||||||||||||||||||||||||||||||||| ||| ||| |||
Sbjct: 225 gacgtctttttccttcccccacaaagcgaagagaagaagcttggttttttcttcttcact 166
Query: 1541 ggaggctcataaccatataaggccgttctgttaaacacacaaccagttcccacataaact 1600
|||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 165 ggaggctcgtaaccatatagggctgttctgttaaacacacaaccagttcccacataaact 106
Query: 1601 ggcccttgaatgccatcaagacctctcaagttaatatcgaaaaacacagtgttcctgttt 1660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 ggcccttgaatgccatcaagacctctcaagttaatatcgaaaaacacagtgttcctgttt 46
Query: 1661 gcatatcggtcattcctatcaataccatcaaacctct 1697
|||||||||||||||||||||||||||||||||||||
Sbjct: 45 gcatatcggtcattcctatcaataccatcaaacctct 9
>gb|CN129331.1|CN129331 RHOH1_34_G09.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_34_G09_A002 5', mRNA sequence
Length = 848
Score = 335 bits (169), Expect = 2e-089
Identities = 556/685 (81%)
Strand = Plus / Minus
Query: 1832 acagctgatacacgaacaagtgcattcatggcaccagccttcttgtgatgttggaatcca 1891
||||| |||||||||| ||||||||||| |||||||||||||||||||| ||||| ||
Sbjct: 695 acagcagatacacgaatcagtgcattcattgcaccagccttcttgtgatgctggaagcct 636
Query: 1892 ggacgtttttcacgagacacataaaccaaacgaggaagttcattgccttcaacgtcaagc 1951
|| | ||||||||||| ||||| || | ||| || | |||||| || ||| ||||||
Sbjct: 635 ggtctcttttcacgagagacatagacaagacgcggtaattcatttccatcagtgtcaaga 576
Query: 1952 cctccactgtgacccaggaaaacctgaatcattccaggatggtccctagtattgttccca 2011
|| |||||||| |||| ||| ||||||||||| |||||||||||||||| ||| ||||||
Sbjct: 575 ccaccactgtgccccaagaacacctgaatcatgccaggatggtccctaggattattccca 516
Query: 2012 ggccaaggtgtaccatcttgcatgatccatccctcctcgggaactttttgtgcattggct 2071
||||||| || ||||| |||| |||| ||||| || || ||||| ||||| |||||
Sbjct: 515 ggccaagcagttccatcagccatggtccacccctcttcaggcactttctgtgctttggca 456
Query: 2072 acaagaccattgatacgaactttgaattcttcatattctctcttcatggcccggcgttct 2131
||||| ||||||| | ||||||||||||||||| ||||||||||| || || | |||
Sbjct: 455 acaagggcattgattcttactttgaattcttcatactctctcttcattgctcgtctttcc 396
Query: 2132 ttcacaaatgaagtttgaactttgtctttcaagtaatcaattttctgagcaaagtaccat 2191
|| |||||||||| ||||| |||||| |||| |||||| ||||| ||||||||||| ||
Sbjct: 395 ttaacaaatgaaggttgaattttgtccttcaggtaatctattttttgagcaaagtaaaat 336
Query: 2192 tccggagccctaggctctatgttgtacttcttacagaacggaacccattttctagcaaac 2251
|| ||||| || || || || |||| ||||||||| || |||||||| |||||||||||
Sbjct: 335 tctggagctcttggttcaatattgtgcttcttacaaaagggaacccactttctagcaaat 276
Query: 2252 tctgaagtttcagagagagcatcaaaagtcagcatagcagctccatcatccgaaacatag 2311
|||| ||||| ||||||| ||||| ||||||||||| | |||||||| |||||||||
Sbjct: 275 tctgcggtttctgagagagactcaaatgtcagcatagctgaaccatcatcagaaacatag 216
Query: 2312 caagataccttgtcaaccggataatcgacagcaaggatggaaagcacagtatttgcagtg 2371
|| || || ||||| || || ||||| |||||||| ||||| | ||||| || || |||
Sbjct: 215 catgacactttgtcgacagggtaatccacagcaagaatggacaaaacagtgttggccgtg 156
Query: 2372 acaagaggaggctccttcataggatccacagtactgacaaagatatcaacaggagctaat 2431
| || ||||| ||||||| |||||||| |||||||| |||| ||||| ||||| |
Sbjct: 155 atcagtggaggttccttcaatggatccactgtactgacgaagacatcaatgggagccagc 96
Query: 2432 tgagatggttcaccttctcggtcataccttaaagccagtctatcaaggtatgtttcacgg 2491
|| || || || || |||| |||||||| || || || || ||||| ||||| ||||||
Sbjct: 95 tgtgacggctctccctctctatcatacctcaatgcaagcctgtcaagatatgtctcacgg 36
Query: 2492 ttgattggggaccactttgggaact 2516
|||||||| |||| ||||||||||
Sbjct: 35 ttgattggataccattttgggaact 11
>gb|CN128754.1|CN128754 RHOH1_31_H09.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_31_H09_A002 3', mRNA sequence
Length = 705
Score = 331 bits (167), Expect = 3e-088
Identities = 370/435 (85%), Gaps = 2/435 (0%)
Strand = Plus / Minus
Query: 242 tcctagcagttgatgccacat-ttcgcgatatcaggaccagtgacccgggtggtgaatgg 300
||||||||||||||||||||| || | | |||| || |||||||| ||||||||||| ||
Sbjct: 446 tcctagcagttgatgccacatgtttgag-tatctgggccagtgacacgggtggtgaacgg 388
Query: 301 atcgatacgaacccacatcagggaaaagatcgacgcaaggaggatagcccagacaacgac 360
|| || |||||||||| || ||| ||||| || || | ||||| ||||| ||||| ||
Sbjct: 387 gtctatgcgaacccacagcaaggagaagattgatgccaacaggattgcccaaacaaccac 328
Query: 361 aatggtcggcgtgcggttctgcttccccatgaggcccttgaggaaggggtacaggtggac 420
|||||||| |||||||| ||| |||||||| || |||||||| ||||||| ||| ||
Sbjct: 327 gatggtcggggtgcggttttgccgacccatgagacctttgaggaatgggtacaagtgcac 268
Query: 421 aatcacccagaacgcaaagaagagcttcccgaaaagaggtccccatgactggtaaccgct 480
|||||||||||| || || || ||||| || ||||| || |||||||| |||||||||||
Sbjct: 267 aatcacccagaaggcgaaaaaaagcttgccaaaaagcgggccccatgattggtaaccgct 208
Query: 481 attgattgcgtaggaaatgccagcgaccacgccgaccaggttgatgatcaaaatagtggt 540
||||| |||||||| || ||||| || || || |||||||||||||||||||| || ||
Sbjct: 207 gttgatcgcgtaggagataccagcaacaacaccaaccaggttgatgatcaaaatggtcgt 148
Query: 541 tggtgggatcagaagcgttgtccacttgaacatgtagagctcggcaaaatcaccttcttc 600
||||||||||| |||||||||||||||||||||||| ||||| ||||| ||||| |||||
Sbjct: 147 tggtgggatcaaaagcgttgtccacttgaacatgtacagctccgcaaagtcaccgtcttc 88
Query: 601 gtcagtggccttagaggtgacagtgaagctcgtgtcgataccagcaagcaccttcaggag 660
|| | |||||| ||||||||||||||| | ||||||||||| ||||||||||| |||||
Sbjct: 87 atctgaggcctttgaggtgacagtgaagttggtgtcgataccggcaagcaccttgaggag 28
Query: 661 accctggaagacggc 675
|||||||||||||||
Sbjct: 27 accctggaagacggc 13
>gb|CD423915.1|CD423915 SA1_2_G12.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_2_G12_A002 5', mRNA sequence
Length = 679
Score = 317 bits (160), Expect = 4e-084
Identities = 196/208 (94%)
Strand = Plus / Minus
Query: 3263 ttgtggcgcttgtacttagtcttgcactgcgggcacgcctgggtgccgtccttgcgctcg 3322
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 ttgtgacgcttgtacttggtcttgcactgcgggcacgcctgggtgccgtccttgcgctcg 617
Query: 3323 tactcgtagcatgggcggcacacggggaagccgcagacgtcgcaggcggtgaagaggtcg 3382
||||||||||| || |||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 616 tactcgtagcagggccggcacactgggaagccgcagacgtcgcaggcggtgaagagctcg 557
Query: 3383 ccgtccgccgcggtgcccacgccgtcgccgcagatctggcacacctgcccggccacatgc 3442
||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||
Sbjct: 556 ccgtccgccgcggtgcccacgccatcgccgcagatctggcacacatgcccggccccatgc 497
Query: 3443 ttccccgaattcgtggcgtcgccgccgt 3470
||||| ||||||| |||||||||||||
Sbjct: 496 ttcccagaattcgcagcgtcgccgccgt 469
Score = 145 bits (73), Expect = 3e-032
Identities = 113/125 (90%), Gaps = 1/125 (0%)
Strand = Plus / Minus
Query: 3462 cgccgccgtccatggcgcaccaatccgagccctccacgagttcacaaacgccggaccccc 3521
|||| ||||||||||||| ||||||||||||||||||| |||||||| |||||||||||
Sbjct: 465 cgccaccgtccatggcgcgccaatccgagccctccacg-gttcacaacggccggaccccc 407
Query: 3522 gccgactcaccgcattcctcggcttcccctcccgcgtgccggcgccgaatcgcccccggg 3581
||| ||||||||||||||||||||||||||||||| || |||| |||||||| |||||
Sbjct: 406 accgcctcaccgcattcctcggcttcccctcccgcgcaccagcgcggaatcgcctccggg 347
Query: 3582 ctcgc 3586
|||||
Sbjct: 346 ctcgc 342
Score = 71.9 bits (36), Expect = 4e-010
Identities = 69/80 (86%), Gaps = 5/80 (6%)
Strand = Plus / Minus
Query: 3625 gtggcagtggccctaacccagtg-----ttcacctcgcgcaggagcaagtggtggagctc 3679
||||||||||| ||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 297 gtggcagtggcgctaacccagtgctcacctcacctcgcgcgggagcaagtggcggagctc 238
Query: 3680 gctcgaggcggcgacggagg 3699
|| |||| ||||||||||||
Sbjct: 237 gcgcgagacggcgacggagg 218
>gb|CD227355.1|CD227355 CCC1_50_D12.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_50_D12_A007 5', mRNA sequence
Length = 669
Score = 297 bits (150), Expect = 4e-078
Identities = 524/649 (80%)
Strand = Plus / Minus
Query: 1898 ttttcacgagacacataaaccaaacgaggaagttcattgccttcaacgtcaagccctcca 1957
||||||||||| ||||| || | ||| || | |||||| || ||| |||||| || |||
Sbjct: 653 ttttcacgagagacatagacaagacgcggtaattcatttccatcagtgtcaagaccacca 594
Query: 1958 ctgtgacccaggaaaacctgaatcattccaggatggtccctagtattgttcccaggccaa 2017
||||| |||| ||| ||||||||||| |||||||||||||||| ||| ||| ||||||||
Sbjct: 593 ctgtgccccaagaacacctgaatcatgccaggatggtccctaggattattcncaggccaa 534
Query: 2018 ggtgtaccatcttgcatgatccatccctcctcgggaactttttgtgcattggctacaaga 2077
| || ||||| |||| |||| ||||| || || ||||| ||||| ||||| |||||
Sbjct: 533 gcagttccatcagccatggtccacccctcttcaggcactttctgtgctttggcaacaagg 474
Query: 2078 ccattgatacgaactttgaattcttcatattctctcttcatggcccggcgttctttcaca 2137
||||||| | ||||||||||||||||| ||||||||||| || || | ||| || |||
Sbjct: 473 gcattgattcttactttgaattcttcatactctctcttcattgctcgtctttccttaaca 414
Query: 2138 aatgaagtttgaactttgtctttcaagtaatcaattttctgagcaaagtaccattccgga 2197
||||||| ||||| |||||| |||| |||||| ||||| ||||||||||| |||| |||
Sbjct: 413 aatgaaggttgaattttgtccttcaggtaatctattttttgagcaaagtaaaattctgga 354
Query: 2198 gccctaggctctatgttgtacttcttacagaacggaacccattttctagcaaactctgaa 2257
|| || || || || |||| ||||||||| || |||||||| ||||||||||| ||||
Sbjct: 353 gctcttggttcaatattgtgcttcttacaaaagggaacccactttctagcaaattctgcg 294
Query: 2258 gtttcagagagagcatcaaaagtcagcatagcagctccatcatccgaaacatagcaagat 2317
||||| ||||||| ||||| ||||||||||| | |||||||| ||||||||||| ||
Sbjct: 293 gtttctgagagagactcaaatgtcagcatagctgaaccatcatcagaaacatagcatgac 234
Query: 2318 accttgtcaaccggataatcgacagcaaggatggaaagcacagtatttgcagtgacaaga 2377
|| ||||| || || ||||| |||||||| ||||| | ||||| || || |||| ||
Sbjct: 233 actttgtcgacagggtaatccacagcaagaatggacaaaacagtgttggccgtgatcagt 174
Query: 2378 ggaggctccttcataggatccacagtactgacaaagatatcaacaggagctaattgagat 2437
||||| ||||||| |||||||| |||||||| |||| ||||| ||||| | || ||
Sbjct: 173 ggaggttccttcaatggatccactgtactgacgaagacatcaatgggagccagctgtgac 114
Query: 2438 ggttcaccttctcggtcataccttaaagccagtctatcaaggtatgtttcacggttgatt 2497
|| || || |||| |||||||| || || || || ||||| ||||| ||||||||||||
Sbjct: 113 ggctctccctctctatcatacctcaatgcaagcctgtcaagatatgtctcacggttgatt 54
Query: 2498 ggggaccactttgggaactgatccaaaatccaggacaaagcaaaccaga 2546
|| |||| |||||||||||||| | || ||| ||||| ||||||||||
Sbjct: 53 ggataccattttgggaactgatcaagaagccaagacaaggcaaaccaga 5
>gb|BG273410.1|BG273410 OV2_25_D04.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 370
Score = 291 bits (147), Expect = 2e-076
Identities = 308/361 (85%), Gaps = 3/361 (0%)
Strand = Plus / Minus
Query: 2525 atccaggacaaagcaaaccagatctcacatatgacggataaaagccacagtggatatgca 2584
|||||||| | ||| ||||||||||||||||| || || | |||||| | ||| ||||||
Sbjct: 370 atccaggaaagagcgaaccagatctcacatataacagacagaagccataatgggtatgca 311
Query: 2585 ttgttcacaggatgtgtgatacggtagcgcaagaatatgcatagaacagccaaacgtagc 2644
||| |||||||| ||||||||||||| ||||||| |||| ||||||| ||| ||||||
Sbjct: 310 ttgcgcacaggatttgtgatacggtagtgcaagaagatgcttagaacaatcaatcgtagc 251
Query: 2645 acaatgaccattctgtacggatttattctggatgaaggaattggcacttttctagataga 2704
||||||||||| ||||| |||||||| ||||| ||||||| ||| ||||| |||||||||
Sbjct: 250 acaatgaccatcctgtatggatttatcctggaggaaggaagtggaactttcctagataga 191
Query: 2705 ggttgccgagtttcatcattcagtaaggcatcttccatgttataatcagtagaagcatca 2764
|| || ||||||||||| |||| ||||||||||||||||||||||||||| || ||||||
Sbjct: 190 ggctggcgagtttcatcgttcaataaggcatcttccatgttataatcagttgatgcatca 131
Query: 2765 atatcagcaactccacgcccttctgatggagcaatgcttgttccattggtcataggaatt 2824
|||||| |||| || || || || || ||||||||||| || ||||| ||||| ||||||
Sbjct: 130 atatcaccaacaccccgaccctcagagggagcaatgctcgtgccattcgtcatgggaatt 71
Query: 2825 gcacctttatcc---ttcattttccatccatccaccctctctttccatgcaacattgcca 2881
| || |||||| ||||||||||| ||||| |||||||||||||| |||||||| |||
Sbjct: 70 gttcccttatcctgtttcattttccagccatcaaccctctctttccaggcaacattccca 11
Query: 2882 a 2882
|
Sbjct: 10 a 10
>gb|CL177245.1|CL177245 104_384_10893704_116_31916_152 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10893704, DNA
sequence
Length = 676
Score = 278 bits (140), Expect = 4e-072
Identities = 164/172 (95%)
Strand = Plus / Plus
Query: 3283 cttgcactgcgggcacgcctgggtgccgtccttgcgctcgtactcgtagcatgggcggca 3342
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 1 cttgcactgcgggcacgcctgggtgccgtccttgcgctcgtactcgtagcagggccggca 60
Query: 3343 cacggggaagccgcagacgtcgcaggcggtgaagaggtcgccgtccgccgcggtgcccac 3402
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 61 cactgggaagccgcagacgtcgcaggcggtgaagagctcgccgtccgccgcggtgcccac 120
Query: 3403 gccgtcgccgcagatctggcacacctgcccggccacatgcttccccgaattc 3454
||| |||||||||||||||||||| ||||||||| |||||||||| ||||||
Sbjct: 121 gccatcgccgcagatctggcacacatgcccggccccatgcttcccagaattc 172
Score = 145 bits (73), Expect = 3e-032
Identities = 113/125 (90%), Gaps = 1/125 (0%)
Strand = Plus / Plus
Query: 3462 cgccgccgtccatggcgcaccaatccgagccctccacgagttcacaaacgccggaccccc 3521
|||| ||||||||||||| ||||||||||||||||||| |||||||| |||||||||||
Sbjct: 326 cgccaccgtccatggcgcgccaatccgagccctccacg-gttcacaacggccggaccccc 384
Query: 3522 gccgactcaccgcattcctcggcttcccctcccgcgtgccggcgccgaatcgcccccggg 3581
||| ||||||||||||||||||||||||||||||| || |||| |||||||| |||||
Sbjct: 385 accgcctcaccgcattcctcggcttcccctcccgcgcaccagcgcggaatcgcctccggg 444
Query: 3582 ctcgc 3586
|||||
Sbjct: 445 ctcgc 449
Score = 71.9 bits (36), Expect = 4e-010
Identities = 69/80 (86%), Gaps = 5/80 (6%)
Strand = Plus / Plus
Query: 3625 gtggcagtggccctaacccagtg-----ttcacctcgcgcaggagcaagtggtggagctc 3679
||||||||||| ||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 494 gtggcagtggcgctaacccagtgctcacctcacctcgcgcgggagcaagtggcggagctc 553
Query: 3680 gctcgaggcggcgacggagg 3699
|| |||| ||||||||||||
Sbjct: 554 gcgcgagacggcgacggagg 573
>gb|BG557440.1|BG557440 EM1_44_B10.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 506
Score = 278 bits (140), Expect = 4e-072
Identities = 239/272 (87%)
Strand = Plus / Minus
Query: 1163 ccatagatccacccaatctcagttccccagtcagttttgtcctcatagccacagctgatg 1222
||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || ||
Sbjct: 506 ccatagatccacccaatctcagttccccattcagtcttgtcctcatagccacaacttata 447
Query: 1223 acatgaatagcttctttcagaagagactctggagttgcagattgtggaacaccgccatat 1282
||||| |||||||||||||||||||| || ||||||||||| || |||||||| ||||||
Sbjct: 446 acatggatagcttctttcagaagagattccggagttgcagactgaggaacaccaccatat 387
Query: 1283 tccatcagagtagaggctacaaaaacactggactggccaaatctcttctccaagctcatt 1342
||||||||||| ||||| |||||| | || || ||||||||||||||||||||||||
Sbjct: 386 tccatcagagtggaggcaacaaaagctgcagattgaccaaatctcttctccaagctcatt 327
Query: 1343 tgagacataatcagcgatttctcatcatcaaactgagaaccttcaatcccttcctctata 1402
|||||||||| || ||||||||||||||||| || ||||||| || |||||||||
Sbjct: 326 tgagacataagaagtgatttctcatcatcaaatccagcgccttcaactccctcctctata 267
Query: 1403 tcttcgagattaaatactggtacagaactgtc 1434
||||||||||| |||||||| |||||||||||
Sbjct: 266 tcttcgagattgaatactggcacagaactgtc 235
Score = 151 bits (76), Expect = 6e-034
Identities = 103/112 (91%)
Strand = Plus / Minus
Query: 1544 ggctcataaccatataaggccgttctgttaaacacacaaccagttcccacataaactggc 1603
|||||||||||||||| || |||||||| || ||||||||||||||||||||||||||
Sbjct: 119 ggctcataaccatatagagctgttctgttgaaaacacaaccagttcccacataaactggt 60
Query: 1604 ccttgaatgccatcaagacctctcaagttaatatcgaaaaacacagtgttcc 1655
||||| ||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 59 ccttggatgccatcaagacctctcaagttaatatcaaaaaacacggtgttcc 8
>gb|BG465505.1|BG465505 RHIZ2_45_D07.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 551
Score = 276 bits (139), Expect = 1e-071
Identities = 319/377 (84%), Gaps = 9/377 (2%)
Strand = Plus / Minus
Query: 2699 gatagaggttgccgagtttcatcattcagtaaggcatcttccatgttataatcagtagaa 2758
|||||||| || ||||||||||| |||| ||||||||||||||||||||||||||| ||
Sbjct: 551 gatagaggctggcgagtttcatcgttcaataaggcatcttccatgttataatcagttgat 492
Query: 2759 gcatcaatatcagcaactccacgcccttctgatggagcaatgcttgttccattggtcata 2818
|||||||||||| |||| || || || || || |||||||||||||| ||||| |||||
Sbjct: 491 gcatcaatatcaccaacaccccgaccctcagagggagcaatgcttgtgccatttgtcatg 432
Query: 2819 ggaattgcacctttatcc---ttcattttccatccatccaccctctctttccatgcaaca 2875
||||||| || |||||| ||||||||||| ||||| |||||||||||||| ||||||
Sbjct: 431 ggaattgttcccttatcctgtttcattttccagccatcaaccctctctttccaggcaaca 372
Query: 2876 ttgccaaggctaccggagaactccctcgatgggtttggagaatgatttacataaggaaat 2935
|| |||| |||||| ||||| ||||| || || ||||| |||||||| ||||| ||||||
Sbjct: 371 ttcccaatgctaccagagaattcccttgacggatttggtgaatgattcacatagggaaat 312
Query: 2936 tgatgtccacgcctgccaatgttcccaacaggagacatcatatga---tcaggggaagct 2992
|| ||||| |||||||||||||| || |||||||||||| |||||||||||
Sbjct: 311 gga---gcacgcttgccaatgttcccagttggggacatcatatgatggtcaggggaagca 255
Query: 2993 ccaggaatctctcctgagatctggctatgagttagtgacgggatatatccacgagggatc 3052
||||| || ||||| ||||||||||| | ||| | ||||||||| ||||| |||||||||
Sbjct: 254 ccagggatttctcccgagatctggctgttagtgactgacgggatgtatccccgagggatc 195
Query: 3053 tcaccactgtcatactt 3069
|||||||||||||||||
Sbjct: 194 tcaccactgtcatactt 178
Score = 50.1 bits (25), Expect = 0.002
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 3152 tcagcaatcttttgcttctgatcctggttgccagatgcttggtagttgtagtc 3204
||||||||||| |||||||| || | |||||||||||| |||||||| ||||
Sbjct: 92 tcagcaatcttctgcttctggtcatcgttgccagatgcagggtagttgaagtc 40
>gb|BG103285.1|BG103285 RHIZ2_18_E07.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 585
Score = 272 bits (137), Expect = 2e-070
Identities = 182/197 (92%)
Strand = Plus / Minus
Query: 3254 gggctccctttgtggcgcttgtacttagtcttgcactgcgggcacgcctgggtgccgtcc 3313
|||||||| ||||||||||||||||| ||||||||||| ||||||||||| |||||||||
Sbjct: 356 gggctccccttgtggcgcttgtacttggtcttgcactgggggcacgcctgcgtgccgtcc 297
Query: 3314 ttgcgctcgtactcgtagcatgggcggcacacggggaagccgcagacgtcgcaggcggtg 3373
|||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||
Sbjct: 296 ttgcgctcgtactcgtagcaggggcggcacaccgggaacccgcagacgtcgcaggcggtg 237
Query: 3374 aagaggtcgccgtccgccgcggtgcccacgccgtcgccgcagatctggcacacctgcccg 3433
|||| ||| |||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 236 aagacgtccccgtccgccgtggtgcccacgccgtcgccacagatctggcacacctgcccg 177
Query: 3434 gccacatgcttccccga 3450
|| || || |||||||
Sbjct: 176 cccccacgcctccccga 160
Score = 67.9 bits (34), Expect = 6e-009
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 3028 tgacgggatatatccacgagggatctcaccactgtcatactt 3069
||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 585 tgacgggatgtatccccgagggatctcaccactgtcatactt 544
Score = 50.1 bits (25), Expect = 0.002
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 3152 tcagcaatcttttgcttctgatcctggttgccagatgcttggtagttgtagtc 3204
||||||||||| |||||||| || | |||||||||||| |||||||| ||||
Sbjct: 458 tcagcaatcttctgcttctggtcatcgttgccagatgcagggtagttgaagtc 406
>gb|BG947832.1|BG947832 IP1_5_G03.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 464
Score = 270 bits (136), Expect = 9e-070
Identities = 169/180 (93%)
Strand = Plus / Minus
Query: 3254 gggctccctttgtggcgcttgtacttagtcttgcactgcgggcacgcctgggtgccgtcc 3313
|||||||| ||||||||||||||||| ||||||||||| ||||||||||| |||||||||
Sbjct: 335 gggctccccttgtggcgcttgtacttggtcttgcactgggggcacgcctgcgtgccgtcc 276
Query: 3314 ttgcgctcgtactcgtagcatgggcggcacacggggaagccgcagacgtcgcaggcggtg 3373
|||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||
Sbjct: 275 ttgcgctcgtactcgtagcaggggcggcacaccgggaacccgcagacgtcgcaggcggtg 216
Query: 3374 aagaggtcgccgtccgccgcggtgcccacgccgtcgccgcagatctggcacacctgcccg 3433
|||| ||| || ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 aagacgtccccctccgccgtggtgcccacgccgtcgccgcagatctggcacacctgcccg 156
Score = 42.1 bits (21), Expect = 0.37
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 3152 tcagcaatcttttgcttctgatcctggttgccagatgcttggtagttgtagtc 3204
||||||||||| |||||||| || | ||||||||||| |||||||| ||||
Sbjct: 437 tcagcaatcttctgcttctggtcatcattgccagatgcagggtagttgaagtc 385
>gb|BI076099.1|BI076099 IP1_25_G03.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 528
Score = 270 bits (136), Expect = 9e-070
Identities = 169/180 (93%)
Strand = Plus / Minus
Query: 3254 gggctccctttgtggcgcttgtacttagtcttgcactgcgggcacgcctgggtgccgtcc 3313
|||||||| ||||||||||||||||| ||||||||||| ||||||||||| |||||||||
Sbjct: 335 gggctccccttgtggcgcttgtacttggtcttgcactgggggcacgcctgcgtgccgtcc 276
Query: 3314 ttgcgctcgtactcgtagcatgggcggcacacggggaagccgcagacgtcgcaggcggtg 3373
|||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||
Sbjct: 275 ttgcgctcgtactcgtagcaggggcggcacaccgggaacccgcagacgtcgcaggcggtg 216
Query: 3374 aagaggtcgccgtccgccgcggtgcccacgccgtcgccgcagatctggcacacctgcccg 3433
|||| ||| || ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 aagacgtccccctccgccgtggtgcccacgccgtcgccgcagatctggcacacctgcccg 156
Score = 42.1 bits (21), Expect = 0.37
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 3152 tcagcaatcttttgcttctgatcctggttgccagatgcttggtagttgtagtc 3204
||||||||||| |||||||| || | ||||||||||| |||||||| ||||
Sbjct: 437 tcagcaatcttctgcttctggtcatcattgccagatgcagggtagttgaagtc 385
>gb|BI245885.1|BI245885 IP1_64_G05.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 495
Score = 270 bits (136), Expect = 9e-070
Identities = 169/180 (93%)
Strand = Plus / Minus
Query: 3254 gggctccctttgtggcgcttgtacttagtcttgcactgcgggcacgcctgggtgccgtcc 3313
|||||||| ||||||||||||||||| ||||||||||| ||||||||||| |||||||||
Sbjct: 275 gggctccccttgtggcgcttgtacttggtcttgcactgggggcacgcctgcgtgccgtcc 216
Query: 3314 ttgcgctcgtactcgtagcatgggcggcacacggggaagccgcagacgtcgcaggcggtg 3373
|||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||
Sbjct: 215 ttgcgctcgtactcgtagcaggggcggcacaccgggaacccgcagacgtcgcaggcggtg 156
Query: 3374 aagaggtcgccgtccgccgcggtgcccacgccgtcgccgcagatctggcacacctgcccg 3433
|||| ||| || ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagacgtccccctccgccgtggtgcccacgccgtcgccgcagatctggcacacctgcccg 96
Score = 56.0 bits (28), Expect = 2e-005
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 3038 tatccacgagggatctcaccactgtcatactt 3069
||||| ||||||||||||||||||||||||||
Sbjct: 494 tatcctcgagggatctcaccactgtcatactt 463
Score = 42.1 bits (21), Expect = 0.37
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 3152 tcagcaatcttttgcttctgatcctggttgccagatgcttggtagttgtagtc 3204
||||||||||| |||||||| || | ||||||||||| |||||||| ||||
Sbjct: 377 tcagcaatcttctgcttctggtcatcattgccagatgcagggtagttgaagtc 325
>gb|CD233360.1|CD233360 SS1_13_G11.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA clone
SS1_13_G11_A012 5', mRNA sequence
Length = 610
Score = 270 bits (136), Expect = 9e-070
Identities = 169/180 (93%)
Strand = Plus / Minus
Query: 3254 gggctccctttgtggcgcttgtacttagtcttgcactgcgggcacgcctgggtgccgtcc 3313
|||||||| ||||||||||||||||| ||||||||||| ||||||||||| |||||||||
Sbjct: 372 gggctccccttgtggcgcttgtacttggtcttgcactgggggcacgcctgcgtgccgtcc 313
Query: 3314 ttgcgctcgtactcgtagcatgggcggcacacggggaagccgcagacgtcgcaggcggtg 3373
|||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||
Sbjct: 312 ttgcgctcgtactcgtagcaggggcggcacaccgggaacccgcagacgtcgcaggcggtg 253
Query: 3374 aagaggtcgccgtccgccgcggtgcccacgccgtcgccgcagatctggcacacctgcccg 3433
|||| ||| || ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 aagacgtccccctccgccgtggtgcccacgccgtcgccgcagatctggcacacctgcccg 193
Score = 67.9 bits (34), Expect = 6e-009
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 3028 tgacgggatatatccacgagggatctcaccactgtcatactt 3069
||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 601 tgacgggatgtatccccgagggatctcaccactgtcatactt 560
Score = 42.1 bits (21), Expect = 0.37
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 3152 tcagcaatcttttgcttctgatcctggttgccagatgcttggtagttgtagtc 3204
||||||||||| |||||||| || | ||||||||||| |||||||| ||||
Sbjct: 474 tcagcaatcttatgcttctggtcatcattgccagatgcagggtagttgaagtc 422
>gb|CF071834.1|CF071834 FE1_19_D03.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_19_D03_A002 3', mRNA sequence
Length = 615
Score = 270 bits (136), Expect = 9e-070
Identities = 306/360 (85%), Gaps = 2/360 (0%)
Strand = Plus / Minus
Query: 242 tcctagcagttgatgccacat-ttcgcgatatcaggaccagtgacccgggtggtgaatgg 300
||||||||||||||||||||| || | | |||| || |||||||| ||||||||||| ||
Sbjct: 374 tcctagcagttgatgccacatgtttgag-tatctgggccagtgacacgggtggtgaacgg 316
Query: 301 atcgatacgaacccacatcagggaaaagatcgacgcaaggaggatagcccagacaacgac 360
|| || |||||||||| || ||| |||||||| || | ||||| ||||||||||| ||
Sbjct: 315 gtctatgcgaacccacagcaaggagaagatcgatgccaacaggattgcccagacaaccac 256
Query: 361 aatggtcggcgtgcggttctgcttccccatgaggcccttgaggaaggggtacaggtggac 420
|||||||| |||||||| ||| |||||||| || |||||||| ||||||| ||| ||
Sbjct: 255 gatggtcggggtgcggttttgccgacccatgagacctttgaggaatgggtacaagtgcac 196
Query: 421 aatcacccagaacgcaaagaagagcttcccgaaaagaggtccccatgactggtaaccgct 480
|||||||||||| || ||||||||||| || || || || |||||||| |||||||||||
Sbjct: 195 aatcacccagaaggcgaagaagagcttgccaaagagcgggccccatgattggtaaccgct 136
Query: 481 attgattgcgtaggaaatgccagcgaccacgccgaccaggttgatgatcaaaatagtggt 540
||||| |||||||| || ||||| || || || |||||||||||||||| ||| || ||
Sbjct: 135 gttgatcgcgtaggagataccagcaacaacaccaaccaggttgatgatcagaatggtcgt 76
Query: 541 tggtgggatcagaagcgttgtccacttgaacatgtagagctcggcaaaatcaccttcttc 600
|||||||||||||||||||||||||||||||||||| ||||| ||||| ||||| |||||
Sbjct: 75 tggtgggatcagaagcgttgtccacttgaacatgtacagctccgcaaagtcaccgtcttc 16
>gb|CF071970.1|CF071970 FE1_19_D03.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_19_D03_A002 5', mRNA sequence
Length = 552
Score = 270 bits (136), Expect = 9e-070
Identities = 169/180 (93%)
Strand = Plus / Minus
Query: 3254 gggctccctttgtggcgcttgtacttagtcttgcactgcgggcacgcctgggtgccgtcc 3313
|||||||| ||||||||||||||||| ||||||||||| ||||||||||| |||||||||
Sbjct: 340 gggctccccttgtggcgcttgtacttggtcttgcactgggggcacgcctgcgtgccgtcc 281
Query: 3314 ttgcgctcgtactcgtagcatgggcggcacacggggaagccgcagacgtcgcaggcggtg 3373
|||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||
Sbjct: 280 ttgcgctcgtactcgtagcaggggcggcacaccgggaacccgcagacgtcgcaggcggtg 221
Query: 3374 aagaggtcgccgtccgccgcggtgcccacgccgtcgccgcagatctggcacacctgcccg 3433
|||| ||| || ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 aagacgtccccctccgccgtggtgcccacgccgtcgccgcagatctggcacacctgcccg 161
Score = 50.1 bits (25), Expect = 0.002
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 3045 gagggatctcaccactgtcatactt 3069
|||||||||||||||||||||||||
Sbjct: 552 gagggatctcaccactgtcatactt 528
Score = 42.1 bits (21), Expect = 0.37
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 3152 tcagcaatcttttgcttctgatcctggttgccagatgcttggtagttgtagtc 3204
||||||||||| |||||||| || | ||||||||||| |||||||| ||||
Sbjct: 442 tcagcaatcttctgcttctggtcatcattgccagatgcagggtagttgaagtc 390
>gb|CF771740.1|CF771740 DSBF1_23_E06.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_23_E06_A010 3', mRNA sequence
Length = 633
Score = 270 bits (136), Expect = 9e-070
Identities = 306/360 (85%), Gaps = 2/360 (0%)
Strand = Plus / Minus
Query: 242 tcctagcagttgatgccacat-ttcgcgatatcaggaccagtgacccgggtggtgaatgg 300
||||||||||||||||||||| || | | |||| || |||||||| ||||||||||| ||
Sbjct: 364 tcctagcagttgatgccacatgtttgag-tatctgggccagtgacacgggtggtgaacgg 306
Query: 301 atcgatacgaacccacatcagggaaaagatcgacgcaaggaggatagcccagacaacgac 360
||||| |||||||||| || ||| ||||||||||| | ||||| ||||||||||| ||
Sbjct: 305 gtcgatgcgaacccacagcaaggagaagatcgacgccaacaggattgcccagacaaccac 246
Query: 361 aatggtcggcgtgcggttctgcttccccatgaggcccttgaggaaggggtacaggtggac 420
|||||||| |||||||| ||| |||||||| ||||||||||| ||||||| ||| ||
Sbjct: 245 gatggtcggggtgcggttttgccgacccatgagacccttgaggaatgggtacaagtgcac 186
Query: 421 aatcacccagaacgcaaagaagagcttcccgaaaagaggtccccatgactggtaaccgct 480
|||||||||||| || ||||||||||| || || || || |||||||| |||||||||||
Sbjct: 185 aatcacccagaaggcgaagaagagcttgccaaagagtgggccccatgattggtaaccgct 126
Query: 481 attgattgcgtaggaaatgccagcgaccacgccgaccaggttgatgatcaaaatagtggt 540
||||| || ||||| || ||||| || || || |||||||||||||||| ||| || ||
Sbjct: 125 gttgatcgcataggagataccagcaacaacaccaaccaggttgatgatcagaatggtcgt 66
Query: 541 tggtgggatcagaagcgttgtccacttgaacatgtagagctcggcaaaatcaccttcttc 600
||| ||||||||||| |||||||||||||||||||| ||||| ||||| ||||| |||||
Sbjct: 65 tggcgggatcagaagggttgtccacttgaacatgtacagctccgcaaagtcaccgtcttc 6
>gb|CN128839.1|CN128839 RHOH1_31_H09.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_31_H09_A002 5', mRNA sequence
Length = 654
Score = 270 bits (136), Expect = 9e-070
Identities = 169/180 (93%)
Strand = Plus / Minus
Query: 3254 gggctccctttgtggcgcttgtacttagtcttgcactgcgggcacgcctgggtgccgtcc 3313
|||||||| ||||||||||||||||| ||||||||||| ||||||||||| |||||||||
Sbjct: 310 gggctccccttgtggcgcttgtacttggtcttgcactgggggcacgcctgcgtgccgtcc 251
Query: 3314 ttgcgctcgtactcgtagcatgggcggcacacggggaagccgcagacgtcgcaggcggtg 3373
|||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||
Sbjct: 250 ttgcgctcgtactcgtagcaggggcggcacaccgggaacccgcagacgtcgcaggcggtg 191
Query: 3374 aagaggtcgccgtccgccgcggtgcccacgccgtcgccgcagatctggcacacctgcccg 3433
|||| ||| || ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 aagacgtccccctccgccgtggtgcccacgccgtcgccgcagatctggcacacctgcccg 131
Score = 107 bits (54), Expect = 7e-021
Identities = 107/124 (86%), Gaps = 3/124 (2%)
Strand = Plus / Minus
Query: 2949 tgccaatgttcccaacaggagacatcatatgat---caggggaagctccaggaatctctc 3005
|||||||||||||| || ||||||||||||| |||||||||| ||||| || ||||
Sbjct: 621 tgccaatgttcccagttggggacatcatatgatggtcaggggaagcaccagggatttctc 562
Query: 3006 ctgagatctggctatgagttagtgacgggatatatccacgagggatctcaccactgtcat 3065
| ||||||||||| | ||| | ||||||||| ||||| ||||||||||||||||||||||
Sbjct: 561 ccgagatctggctgttagtgactgacgggatgtatcctcgagggatctcaccactgtcat 502
Query: 3066 actt 3069
||||
Sbjct: 501 actt 498
>gb|BG557221.1|BG557221 EM1_44_B10.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 608
Score = 262 bits (132), Expect = 2e-067
Identities = 305/360 (84%), Gaps = 2/360 (0%)
Strand = Plus / Minus
Query: 242 tcctagcagttgatgccacat-ttcgcgatatcaggaccagtgacccgggtggtgaatgg 300
||||||||||||||||||||| || | | |||| || |||||||| ||||||||||| ||
Sbjct: 365 tcctagcagttgatgccacatgtttgag-tatctgggccagtgacacgggtggtgaacgg 307
Query: 301 atcgatacgaacccacatcagggaaaagatcgacgcaaggaggatagcccagacaacgac 360
|| || |||||||||| || ||| ||||| || || | ||||| ||||||||||| ||
Sbjct: 306 gtctatgcgaacccacagcaaggagaagattgatgccaacaggattgcccagacaaccac 247
Query: 361 aatggtcggcgtgcggttctgcttccccatgaggcccttgaggaaggggtacaggtggac 420
|||||||| |||||||| ||| |||||||| || |||||||| ||||||| ||| ||
Sbjct: 246 gatggtcggggtgcggttttgccgacccatgagacctttgaggaatgggtacaagtgcac 187
Query: 421 aatcacccagaacgcaaagaagagcttcccgaaaagaggtccccatgactggtaaccgct 480
|||||||||||| || ||||||||||| || || || || |||||||| |||||||||||
Sbjct: 186 aatcacccagaaggcgaagaagagcttgccaaagagcgggccccatgattggtaaccgct 127
Query: 481 attgattgcgtaggaaatgccagcgaccacgccgaccaggttgatgatcaaaatagtggt 540
||||| |||||||| || ||||| || || || |||||||||||||||| ||| || ||
Sbjct: 126 gttgatcgcgtaggagataccagcaacaacaccaaccaggttgatgatcagaatggtcgt 67
Query: 541 tggtgggatcagaagcgttgtccacttgaacatgtagagctcggcaaaatcaccttcttc 600
|||||||||||||||||||||||||||||||||||| ||||| ||||| ||||| |||||
Sbjct: 66 tggtgggatcagaagcgttgtccacttgaacatgtacagctccgcaaagtcaccgtcttc 7
>gb|CD427292.1|CD427292 SA1_18_E03.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_18_E03_A002 5', mRNA sequence
Length = 531
Score = 262 bits (132), Expect = 2e-067
Identities = 168/180 (93%)
Strand = Plus / Minus
Query: 3254 gggctccctttgtggcgcttgtacttagtcttgcactgcgggcacgcctgggtgccgtcc 3313
|||||||| ||||||||||||||||| ||||||||||| |||| |||||| |||||||||
Sbjct: 364 gggctccccttgtggcgcttgtacttggtcttgcactgggggcgcgcctgcgtgccgtcc 305
Query: 3314 ttgcgctcgtactcgtagcatgggcggcacacggggaagccgcagacgtcgcaggcggtg 3373
|||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||
Sbjct: 304 ttgcgctcgtactcgtagcaggggcggcacaccgggaacccgcagacgtcgcaggcggtg 245
Query: 3374 aagaggtcgccgtccgccgcggtgcccacgccgtcgccgcagatctggcacacctgcccg 3433
|||| ||| || ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 aagacgtccccctccgccgtggtgcccacgccgtcgccgcagatctggcacacctgcccg 185
Score = 42.1 bits (21), Expect = 0.37
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 3152 tcagcaatcttttgcttctgatcctggttgccagatgcttggtagttgtagtc 3204
||||||||||| |||||||| || | ||||||||||| |||||||| ||||
Sbjct: 466 tcagcaatcttctgcttctggtcatcattgccagatgcagggtagttgaagtc 414
>gb|CW024404.1|CW024404 104_164_10434936_1_30002 Sorghum methylation filtered library (LibID:
104) Sorghum bicolor genomic clone 10434936, DNA sequence
Length = 549
Score = 260 bits (131), Expect = 8e-067
Identities = 161/171 (94%)
Strand = Plus / Plus
Query: 3263 ttgtggcgcttgtacttagtcttgcactgcgggcacgcctgggtgccgtccttgcgctcg 3322
||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 195 ttgtggcgcttgtacttggtcttgcactgggggcacgcctgcgtgccgtccttgcgctcg 254
Query: 3323 tactcgtagcatgggcggcacacggggaagccgcagacgtcgcaggcggtgaagaggtcg 3382
||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||| |||
Sbjct: 255 tactcgtagcaggggcggcacaccgggaacccgcagacgtcgcaggcggtgaagacgtcc 314
Query: 3383 ccgtccgccgcggtgcccacgccgtcgccgcagatctggcacacctgcccg 3433
|| ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ccctccgccgtggtgcccacgccgtcgccgcagatctggcacacctgcccg 365
>gb|CW366544.1|CW366544 fsbb001f039j12f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f039j12, DNA
sequence
Length = 726
Score = 260 bits (131), Expect = 8e-067
Identities = 161/171 (94%)
Strand = Plus / Minus
Query: 3263 ttgtggcgcttgtacttagtcttgcactgcgggcacgcctgggtgccgtccttgcgctcg 3322
||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 337 ttgtggcgcttgtacttggtcttgcactgggggcacgcctgcgtgccgtccttgcgctcg 278
Query: 3323 tactcgtagcatgggcggcacacggggaagccgcagacgtcgcaggcggtgaagaggtcg 3382
||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||| |||
Sbjct: 277 tactcgtagcaggggcggcacaccgggaacccgcagacgtcgcaggcggtgaagacgtcc 218
Query: 3383 ccgtccgccgcggtgcccacgccgtcgccgcagatctggcacacctgcccg 3433
|| ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 ccctccgccgtggtgcccacgccgtcgccgcagatctggcacacctgcccg 167
>gb|CD233339.1|CD233339 SS1_13_G11.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_13_G11_A012 3', mRNA sequence
Length = 616
Score = 254 bits (128), Expect = 5e-065
Identities = 295/348 (84%), Gaps = 2/348 (0%)
Strand = Plus / Minus
Query: 242 tcctagcagttgatgccacat-ttcgcgatatcaggaccagtgacccgggtggtgaatgg 300
||||||||||||||||||||| || | | |||| || |||||||| ||||||||||| ||
Sbjct: 347 tcctagcagttgatgccacatgtttgag-tatctgggccagtgacacgggtggtgaacgg 289
Query: 301 atcgatacgaacccacatcagggaaaagatcgacgcaaggaggatagcccagacaacgac 360
||||| |||||||||| || ||| ||||||||||| | ||||| ||||||||||| ||
Sbjct: 288 gtcgatgcgaacccacagcaaggagaagatcgacgccaacaggattgcccagacaaccac 229
Query: 361 aatggtcggcgtgcggttctgcttccccatgaggcccttgaggaaggggtacaggtggac 420
|||||||| |||||||| ||| |||||||| ||||||||||| ||||||| ||| ||
Sbjct: 228 gatggtcggggtgcggttttgccgacccatgagacccttgaggaatgggtacaagtgcac 169
Query: 421 aatcacccagaacgcaaagaagagcttcccgaaaagaggtccccatgactggtaaccgct 480
|||||||||||| || ||||||||||| || || || || |||||||| |||||||||||
Sbjct: 168 aatcacccagaaggcgaagaagagcttgccaaagagtgggccccatgattggtaaccgct 109
Query: 481 attgattgcgtaggaaatgccagcgaccacgccgaccaggttgatgatcaaaatagtggt 540
||||| || ||||| || ||||| || || || |||||||||||||||| ||| || ||
Sbjct: 108 gttgatcgcataggagataccagcaacaacaccaaccaggttgatgatcagaatggtcgt 49
Query: 541 tggtgggatcagaagcgttgtccacttgaacatgtagagctcggcaaa 588
||| ||||||| ||| |||||||||||||||||||| ||||| |||||
Sbjct: 48 tggcgggatcaaaagggttgtccacttgaacatgtacagctccgcaaa 1
>gb|CD210886.1|CD210886 HS1_66_G06.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_66_G06_A012 5', mRNA sequence
Length = 537
Score = 248 bits (125), Expect = 3e-063
Identities = 166/180 (92%)
Strand = Plus / Minus
Query: 3254 gggctccctttgtggcgcttgtacttagtcttgcactgcgggcacgcctgggtgccgtcc 3313
|||||||| ||||||||||||||||| ||||||||||| ||||||||||| | ||||||
Sbjct: 372 gggctccccttgtggcgcttgtacttggtcttgcactgggggcacgcctgcgncccgtcc 313
Query: 3314 ttgcgctcgtactcgtagcatgggcggcacacggggaagccgcagacgtcgcaggcggtg 3373
|||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||
Sbjct: 312 ttgcgctcgtactcgtagcaggggcggcacaccgggaacccgcagacgtcgcaggcggtg 253
Query: 3374 aagaggtcgccgtccgccgcggtgcccacgccgtcgccgcagatctggcacacctgcccg 3433
|||| ||| || ||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 aagacgtccccctccgctgtggtgcccacgccgtcgccgcagatctggcacacctgcccg 193
Score = 42.1 bits (21), Expect = 0.37
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 3152 tcagcaatcttttgcttctgatcctggttgccagatgcttggtagttgtagtc 3204
||||||||||| |||||||| || | ||||||||||| |||||||| ||||
Sbjct: 474 tcagcaatcttctgcttctggtcatcattgccagatgcagggtagttgaagtc 422
>gb|BI245815.1|BI245815 IP1_64_G05.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 616
Score = 246 bits (124), Expect = 1e-062
Identities = 294/348 (84%), Gaps = 2/348 (0%)
Strand = Plus / Minus
Query: 242 tcctagcagttgatgccacat-ttcgcgatatcaggaccagtgacccgggtggtgaatgg 300
||||||||||||||||||||| || | | |||| || |||||||| ||||||||||| ||
Sbjct: 349 tcctagcagttgatgccacatgtttgag-tatctgggccagtgacacgggtggtgaacgg 291
Query: 301 atcgatacgaacccacatcagggaaaagatcgacgcaaggaggatagcccagacaacgac 360
|| || |||||||||| || ||| ||||| || || | ||||| ||||||||||| ||
Sbjct: 290 gtctatgcgaacccacagcaaggagaagattgatgccaacaggattgcccagacaaccac 231
Query: 361 aatggtcggcgtgcggttctgcttccccatgaggcccttgaggaaggggtacaggtggac 420
|||||||| |||||||| ||| |||||||| || |||||||| ||||||| ||| ||
Sbjct: 230 gatggtcggggtgcggttttgccgacccatgagacctttgaggaatgggtacaagtgcac 171
Query: 421 aatcacccagaacgcaaagaagagcttcccgaaaagaggtccccatgactggtaaccgct 480
|||||||||||| || ||||||||||| || || || || |||||||| || ||||||||
Sbjct: 170 aatcacccagaaggcgaagaagagcttgccaaagagcgggccccatgattgataaccgct 111
Query: 481 attgattgcgtaggaaatgccagcgaccacgccgaccaggttgatgatcaaaatagtggt 540
||||| |||||||| || ||||| || || || |||||||||||||||| ||| || ||
Sbjct: 110 gttgatcgcgtaggagataccagcaacaacaccaaccaggttgatgatcagaatggtcgt 51
Query: 541 tggtgggatcagaagcgttgtccacttgaacatgtagagctcggcaaa 588
|||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 50 tggtgggatcagaagcgttgtccacttgaacatgtacagctccgcaaa 3
>gb|BI643766.1|BI643766 IP1_56_G10.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 556
Score = 242 bits (122), Expect = 2e-061
Identities = 422/522 (80%)
Strand = Plus / Minus
Query: 2032 catgatccatccctcctcgggaactttttgtgcattggctacaagaccattgatacgaac 2091
|||| |||| ||||| || || ||||| ||||| ||||| ||||| ||||||| | ||
Sbjct: 536 catggtccacccctcttcaggcactttctgtgctttggcaacaagggcattgattcttac 477
Query: 2092 tttgaattcttcatattctctcttcatggcccggcgttctttcacaaatgaagtttgaac 2151
||||||||||||||| ||||||||||| || || | ||| || |||||||||| |||||
Sbjct: 476 tttgaattcttcatactctctcttcattgctcgtctttccttaacaaatgaaggttgaat 417
Query: 2152 tttgtctttcaagtaatcaattttctgagcaaagtaccattccggagccctaggctctat 2211
|||||| |||| |||||| ||||| ||||||||||| |||| ||||| || || || ||
Sbjct: 416 tttgtccttcaggtaatctattttttgagcaaagtaaaattctggagctcttggttcaat 357
Query: 2212 gttgtacttcttacagaacggaacccattttctagcaaactctgaagtttcagagagagc 2271
|||| ||||||||| || |||||||| ||||||||||| |||| ||||| |||||||
Sbjct: 356 attgtgcttcttacaaaagggaacccactttctagcaaattctgcggtttctgagagaga 297
Query: 2272 atcaaaagtcagcatagcagctccatcatccgaaacatagcaagataccttgtcaaccgg 2331
||||| ||||||||||| | |||||||| ||||||||||| || || ||||| || ||
Sbjct: 296 ctcaaatgtcagcatagctgaaccatcatcagaaacatagcatgacactttgtcgacagg 237
Query: 2332 ataatcgacagcaaggatggaaagcacagtatttgcagtgacaagaggaggctccttcat 2391
||||| |||||||| ||||| | ||||| || || |||| || ||||| |||||||
Sbjct: 236 gtaatccacagcaagaatggacaaaacagtgttggccgtgatcagtggaggttccttcaa 177
Query: 2392 aggatccacagtactgacaaagatatcaacaggagctaattgagatggttcaccttctcg 2451
|||||||| |||||||| |||| ||||| ||||| | || || || || || ||||
Sbjct: 176 tggatccactgtactgacgaagacatcaatgggagccagctgtgacggctctccctctct 117
Query: 2452 gtcataccttaaagccagtctatcaaggtatgtttcacggttgattggggaccactttgg 2511
|||||||| || || || || ||||| ||||| |||||||||||||| |||| |||||
Sbjct: 116 atcatacctcaatgcaagcctgtcaagatatgtctcacggttgattggataccattttgg 57
Query: 2512 gaactgatccaaaatccaggacaaagcaaaccagatctcaca 2553
||||||||| | || ||| ||||| |||||||||| ||||||
Sbjct: 56 gaactgatcaagaagccaagacaaggcaaaccagacctcaca 15
>gb|BF481793.1|BF481793 FM1_20_D08.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 475
Score = 224 bits (113), Expect = 5e-056
Identities = 364/448 (81%)
Strand = Plus / Minus
Query: 1973 acctgaatcattccaggatggtccctagtattgttcccaggccaaggtgtaccatcttgc 2032
||||| |||||||| ||||| || || | || ||| |||||||||| || ||||| |
Sbjct: 471 acctggatcattcctggatgatctcttgggttattcncaggccaaggagtgccatcagcc 412
Query: 2033 atgatccatccctcctcgggaactttttgtgcattggctacaagaccattgatacgaact 2092
||| |||| |||||||| || | |||||| || || |||||||| ||||||| || |||
Sbjct: 411 atggtccagccctcctcaggtattttttgcgcttttgctacaagggcattgatccgtact 352
Query: 2093 ttgaattcttcatattctctcttcatggcccggcgttctttcacaaatgaagtttgaact 2152
||||| |||||||| || |||||||| || || | |||||||||||| |||| ||| | |
Sbjct: 351 ttgaactcttcatactccctcttcatagctcgcctttctttcacaaaagaaggttgtatt 292
Query: 2153 ttgtctttcaagtaatcaattttctgagcaaagtaccattccggagccctaggctctatg 2212
||||| || | |||||| || || ||||||||||| | || ||||||||||| || |||
Sbjct: 291 ttgtcctttaggtaatctatcttttgagcaaagtaaaactctggagccctaggttcaatg 232
Query: 2213 ttgtacttcttacagaacggaacccattttctagcaaactctgaagtttcagagagagca 2272
|||| ||||| || || ||||||||||| || |||||||||| ||||||||| || ||
Sbjct: 231 ttgtgtttcttgcaaaagggaacccatttccttgcaaactctgcagtttcagatagcgct 172
Query: 2273 tcaaaagtcagcatagcagctccatcatccgaaacatagcaagataccttgtcaaccgga 2332
|||||||||| |||||| | || ||||| ||||||||||| ||||| |||||||| ||
Sbjct: 171 tcaaaagtcaacatagctgaaccgtcatcagaaacatagcatgatactttgtcaacaggg 112
Query: 2333 taatcgacagcaaggatggaaagcacagtatttgcagtgacaagaggaggctccttcata 2392
||||| |||||||| ||||| || ||||| || ||||| | |||||||||||||| |
Sbjct: 111 taatccacagcaagaatggacaggacagtgttggcagtaattagaggaggctccttgagt 52
Query: 2393 ggatccacagtactgacaaagatatcaa 2420
|||||||| ||||||||||||| |||||
Sbjct: 51 ggatccactgtactgacaaagacatcaa 24
>gb|CL192265.1|CL192265 104_415_10940114_116_32261_015 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10940114, DNA
sequence
Length = 564
Score = 204 bits (103), Expect = 4e-050
Identities = 172/195 (88%)
Strand = Plus / Minus
Query: 1180 ctcagttccccagtcagttttgtcctcatagccacagctgatgacatgaatagcttcttt 1239
|||||||||||| ||||| ||||||||||||||||| || || ||||| |||||||||||
Sbjct: 454 ctcagttccccattcagtcttgtcctcatagccacaacttataacatggatagcttcttt 395
Query: 1240 cagaagagactctggagttgcagattgtggaacaccgccatattccatcagagtagaggc 1299
||||||||| || ||||||||||| || |||||||| ||||||||||||||||| |||||
Sbjct: 394 cagaagagattccggagttgcagactgaggaacaccaccatattccatcagagtggaggc 335
Query: 1300 tacaaaaacactggactggccaaatctcttctccaagctcatttgagacataatcagcga 1359
|||||| | || || |||||||||||||||||||||||||||||||||| || ||
Sbjct: 334 aacaaaagctgcagattgaccaaatctcttctccaagctcatttgagacataagaagtga 275
Query: 1360 tttctcatcatcaaa 1374
|||||||||||||||
Sbjct: 274 tttctcatcatcaaa 260
Score = 67.9 bits (34), Expect = 6e-009
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 1381 accttcaatcccttcctctatatcttcgagattaaatactggtacagaactgtc 1434
|||||||| || |||||||||||||||||||| |||||||| |||||||||||
Sbjct: 117 accttcaactccctcctctatatcttcgagattgaatactggcacagaactgtc 64
>gb|BF586580.1|BF586580 FM1_29_A05.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 398
Score = 204 bits (103), Expect = 4e-050
Identities = 316/387 (81%)
Strand = Plus / Minus
Query: 2134 cacaaatgaagtttgaactttgtctttcaagtaatcaattttctgagcaaagtaccattc 2193
|||||| |||| ||| | |||||| || | |||||| || || ||||||||||| | ||
Sbjct: 398 cacaaaagaaggttgtattttgtcctttaggtaatctatcttttgagcaaagtaaaactc 339
Query: 2194 cggagccctaggctctatgttgtacttcttacagaacggaacccattttctagcaaactc 2253
||||||||||| || ||||||| ||||| || || ||||||||||| || ||||||||
Sbjct: 338 tggagccctaggttcaatgttgtgtttcttgcaaaagggaacccatttccttgcaaactc 279
Query: 2254 tgaagtttcagagagagcatcaaaagtcagcatagcagctccatcatccgaaacatagca 2313
|| ||||||||| || || |||||||||| |||||| | || ||||| |||||||||||
Sbjct: 278 tgcagtttcagatagcgcttcaaaagtcaacatagctgaaccgtcatcagaaacatagca 219
Query: 2314 agataccttgtcaaccggataatcgacagcaaggatggaaagcacagtatttgcagtgac 2373
||||| |||||||| || ||||| |||||||| ||||| || ||||| || ||||| |
Sbjct: 218 tgatactttgtcaacagggtaatccacagcaagaatggacaggacagtgttggcagtaat 159
Query: 2374 aagaggaggctccttcataggatccacagtactgacaaagatatcaacaggagctaattg 2433
|||||||||||||| | |||||||| ||||||||||||| ||||| ||||| || ||
Sbjct: 158 tagaggaggctccttgagtggatccactgtactgacaaagacatcaattggagccaactg 99
Query: 2434 agatggttcaccttctcggtcataccttaaagccagtctatcaaggtatgtttcacggtt 2493
|| ||| ||||| || | ||||| || || || |||||||| ||||| ||||| |||||
Sbjct: 98 aggtggctcaccctccctatcatatctcaatgcaagtctatcgaggtaagtttcccggtt 39
Query: 2494 gattggggaccactttgggaactgatc 2520
||| || |||||||||||||||||||
Sbjct: 38 gataggataccactttgggaactgatc 12
>gb|CD219969.1|CD219969 CCC1_60_F06.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_60_F06_A007 3', mRNA sequence
Length = 579
Score = 204 bits (103), Expect = 4e-050
Identities = 260/310 (83%), Gaps = 2/310 (0%)
Strand = Plus / Minus
Query: 242 tcctagcagttgatgccacat-ttcgcgatatcaggaccagtgacccgggtggtgaatgg 300
||||||||||||||||||||| || | | |||| || |||||||| ||||||||||| ||
Sbjct: 309 tcctagcagttgatgccacatgtttgag-tatctgggccagtgacacgggtggtgaacgg 251
Query: 301 atcgatacgaacccacatcagggaaaagatcgacgcaaggaggatagcccagacaacgac 360
||||| |||||||||| || ||| ||||||||||| ||||| ||||||||||| ||
Sbjct: 250 gtcgatgcgaacccacagcaaggagaagatcgacgccnacaggattgcccagacaaccac 191
Query: 361 aatggtcggcgtgcggttctgcttccccatgaggcccttgaggaaggggtacaggtggac 420
|||||||| |||||||| ||| |||||||| ||||||||||| ||||||| ||| ||
Sbjct: 190 gatggtcggggtgcggttttgccgacccatgagacccttgaggaatgggtacaagtgcac 131
Query: 421 aatcacccagaacgcaaagaagagcttcccgaaaagaggtccccatgactggtaaccgct 480
|||||||||||| || ||||||||||| || || || || |||||||| |||||||||||
Sbjct: 130 aatcacccagaaggcgaagaagagcttgccaaagagtgggccccatgattggtaaccgct 71
Query: 481 attgattgcgtaggaaatgccagcgaccacgccgaccaggttgatgatcaaaatagtggt 540
||||| || ||||| || ||||| || || || |||||||||||||||| ||| || ||
Sbjct: 70 gttgatcgcataggagataccagcaacaacaccaaccaggttgatgatcagaatggtcgt 11
Query: 541 tggtgggatc 550
||| ||||||
Sbjct: 10 tggcgggatc 1
>gb|BE355233.1|BE355233 DG1_113_C09.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 494
Score = 200 bits (101), Expect = 7e-049
Identities = 317/389 (81%)
Strand = Plus / Minus
Query: 2032 catgatccatccctcctcgggaactttttgtgcattggctacaagaccattgatacgaac 2091
|||| |||| ||||| || || ||||| ||||| ||||| ||||| ||||||| | ||
Sbjct: 466 catggtccacccctcttcaggcactttctgtgctttggcaacaagggcattgattcttac 407
Query: 2092 tttgaattcttcatattctctcttcatggcccggcgttctttcacaaatgaagtttgaac 2151
||||||||||||||| ||||||||||| || || | ||| || |||||||||| |||||
Sbjct: 406 tttgaattcttcatactctctcttcattgctcgtctttccttaacaaatgaaggttgaat 347
Query: 2152 tttgtctttcaagtaatcaattttctgagcaaagtaccattccggagccctaggctctat 2211
|||||| |||| |||||| ||||| ||||||||||| |||| ||||| || || || ||
Sbjct: 346 tttgtccttcaggtaatctattttttgagcaaagtaaaattctggagctcttggttcaat 287
Query: 2212 gttgtacttcttacagaacggaacccattttctagcaaactctgaagtttcagagagagc 2271
|||| ||||||||| || |||||||| ||||||||||| |||| ||||| |||||||
Sbjct: 286 attgtgcttcttacaaaagggaacccactttctagcaaattctgcggtttctgagagaga 227
Query: 2272 atcaaaagtcagcatagcagctccatcatccgaaacatagcaagataccttgtcaaccgg 2331
||||| ||||||||||| | |||||||| ||||||||||| || || ||||| || ||
Sbjct: 226 ctcaaatgtcagcatagctgaaccatcatcagaaacatagcatgacactttgtcgacagg 167
Query: 2332 ataatcgacagcaaggatggaaagcacagtatttgcagtgacaagaggaggctccttcat 2391
||||| |||||||| ||||| | ||||| || || |||| || ||||| |||||||
Sbjct: 166 gtaatccacagcaagaatggacaaaacagtgttggccgtgatcagtggaggttccttcaa 107
Query: 2392 aggatccacagtactgacaaagatatcaa 2420
|||||||| |||||||| |||| |||||
Sbjct: 106 tggatccactgtactgacgaagacatcaa 78
>gb|BI099373.1|BI099373 IP1_41_C08.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 321
Score = 198 bits (100), Expect = 3e-048
Identities = 233/273 (85%), Gaps = 12/273 (4%)
Strand = Plus / Minus
Query: 88 tattaacttacggataaagaccagcggaggtacatat---agcatatgtaattaacgtct 144
|||||||||| ||||||| |||||||||||||||||| | |||||||||||||| |||
Sbjct: 278 tattaacttatggataaacaccagcggaggtacatattacaacatatgtaattaacttct 219
Query: 145 cccgaccaagttcctaccatacta-----taaaaagagccacccactgataacttacgat 199
|||||||| ||||||| ||||||| || |||||||||||||| |||| ||||||
Sbjct: 218 cccgaccatgttcctagcatactacgtattataaagagccacccacctataaattacgaa 159
Query: 200 gcacaatgcgt-ctagttccactctttaattatcttcagctcatcctagcagttgatgcc 258
|||||| || |||||||||||||||||| || |||||||||| |||||||||||||||
Sbjct: 158 --acaatgggtgctagttccactctttaat-atattcagctcattctagcagttgatgcc 102
Query: 259 acatttcgcgatatcaggaccagtgacccgggtggtgaatggatcgatacgaacccacat 318
|| || | || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 gcaattaccaattgggggaccagtgacccgggtggtgaatggatcgatacgaacccacag 42
Query: 319 cagggaaaagatcgacgcaaggaggatagccca 351
||||||||| ||| | ||||||||| |||||||
Sbjct: 41 cagggaaaatatctatgcaaggagggtagccca 9
>gb|BG240580.1|BG240580 OV1_31_F08.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 538
Score = 180 bits (91), Expect = 6e-043
Identities = 337/419 (80%)
Strand = Plus / Minus
Query: 335 gcaaggaggatagcccagacaacgacaatggtcggcgtgcggttctgcttccccatgagg 394
||||||||||| | ||| || | ||| |||||||| || |||||||| |||||||||||
Sbjct: 519 gcaaggaggatggaccaaacgatgacgatggtcggtgtacggttctgtttccccatgaga 460
Query: 395 cccttgaggaaggggtacaggtggacaatcacccagaacgcaaagaagagcttcccgaaa 454
||||| ||||| ||||| ||||||| |||||||||| |||||||| ||||| |||||
Sbjct: 459 cccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagctttccgaag 400
Query: 455 agaggtccccatgactggtaaccgctattgattgcgtaggaaatgccagcgaccacgccg 514
|| || |||||||| ||||| || || ||||| || || || | ||||| || | ||
Sbjct: 399 agtggaccccatgattggtagccactgttgatagcatatgatactccagccactatacca 340
Query: 515 accaggttgatgatcaaaatagtggttggtgggatcagaagcgttgtccacttgaacatg 574
|||||||| || | | | |||||| || || |||||||| |||||||||||||||
Sbjct: 339 accaggtttatcacaagcacagtggtcgggggaatcagaagacttgtccacttgaacaca 280
Query: 575 tagagctcggcaaaatcaccttcttcgtcagtggccttagaggtgacagtgaagctcgtg 634
|| ||||| ||||||||||| || || || || ||||| || ||||| |||||| | |||
Sbjct: 279 tatagctcagcaaaatcaccatcatcatcggttgcctttgatgtgaccgtgaagtttgtg 220
Query: 635 tcgataccagcaagcaccttcaggagaccctggaagacggcaaataaatgcgcagaaata 694
||||| || || ||||| || | |||||| ||||| || ||||| | ||||||||| ||
Sbjct: 219 tcgatccctgccagcacttttaagagaccttggaacacagcaaagagatgcgcagaggta 160
Query: 695 ccaccaatgacccagaactgctcgttcctccaccattcatcaatgccaacaccactcca 753
|||||||||||||| ||||| || || |||||||| || ||||||||||||||||||||
Sbjct: 159 ccaccaatgacccaaaactgttcatttctccaccagtcctcaatgccaacaccactcca 101
>gb|BG559985.1|BG559985 RHIZ2_68_A11.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 482
Score = 174 bits (88), Expect = 4e-041
Identities = 200/236 (84%), Gaps = 6/236 (2%)
Strand = Plus / Minus
Query: 2837 ttcattttccatccatccaccctctctttccatgcaacattgccaaggctaccggagaac 2896
||||||||||| ||||| |||||||||||||| |||||||| |||| |||||| |||||
Sbjct: 469 ttcattttccagccatcaaccctctctttccaggcaacattcccaatgctaccagagaat 410
Query: 2897 tccctcgatgggtttggagaatgatttacataaggaaattgatgtccacgcctgccaatg 2956
||||| || || ||||| |||||||| ||||| |||||| || ||||| ||||||||
Sbjct: 409 tcccttgacggatttggtgaatgattcacatagggaaatggag---cacgcttgccaatg 353
Query: 2957 ttcccaacaggagacatcatatgat---caggggaagctccaggaatctctcctgagatc 3013
|||||| || ||||||||||||| |||||||||| ||||| || ||||| ||||||
Sbjct: 352 ttcccagttggggacatcatatgatggtcaggggaagcaccagggatttctcccgagatc 293
Query: 3014 tggctatgagttagtgacgggatatatccacgagggatctcaccactgtcatactt 3069
||||| | ||| | ||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 292 tggctgttagtgactgacgggatgtatccccgagggatctcaccactgtcatactt 237
Score = 60.0 bits (30), Expect = 2e-006
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 3254 gggctccctttgtggcgcttgtacttagtcttgcactg 3291
|||||||| ||||||||||||||||| |||||||||||
Sbjct: 49 gggctccccttgtggcgcttgtacttggtcttgcactg 12
Score = 50.1 bits (25), Expect = 0.002
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 3152 tcagcaatcttttgcttctgatcctggttgccagatgcttggtagttgtagtc 3204
||||||||||| |||||||| || | |||||||||||| |||||||| ||||
Sbjct: 151 tcagcaatcttctgcttctggtcatcgttgccagatgcagggtagttgaagtc 99
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 944,604
Number of Sequences: 832831
Number of extensions: 944604
Number of successful extensions: 261073
Number of sequences better than 0.5: 256
Number of HSP's better than 0.5 without gapping: 253
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 260345
Number of HSP's gapped (non-prelim): 650
length of query: 3727
length of database: 491,359,669
effective HSP length: 21
effective length of query: 3706
effective length of database: 473,870,218
effective search space: 1756163027908
effective search space used: 1756163027908
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)