BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2430946.2.2
(3838 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN129331.1|CN129331 RHOH1_34_G09.g1_A002 Acid- and alkal... 1503 0.0
gb|CX607503.1|CX607503 ANR1_29_C09.b1_A002 Anaerobic roots ... 1285 0.0
gb|CD227355.1|CD227355 CCC1_50_D12.g1_A007 Callus culture/c... 1201 0.0
gb|CW385345.1|CW385345 fsbb001f068m13k0 Sorghum methylation... 1092 0.0
gb|CL148486.1|CL148486 104_328_10593130_148_31782_254 Sorgh... 1065 0.0
gb|BI075805.1|BI075805 IP1_21_D10.b1_A002 Immature pannicle... 1037 0.0
gb|AW672122.1|AW672122 LG1_357_F04.b1_A002 Light Grown 1 (L... 1029 0.0
gb|BE918108.1|BE918108 OV1_2_A10.b1_A002 Ovary 1 (OV1) Sorg... 1027 0.0
gb|BE918058.1|BE918058 OV1_1_D06.b1_A002 Ovary 1 (OV1) Sorg... 1025 0.0
gb|BI643766.1|BI643766 IP1_56_G10.b1_A002 Immature pannicle... 1007 0.0
gb|BI211927.1|BI211927 IP1_62_B12.b1_A002 Immature pannicle... 1003 0.0
gb|AW744882.1|AW744882 LG1_384_E04.b1_A002 Light Grown 1 (L... 1001 0.0
gb|BE918570.1|BE918570 OV1_8_E09.b1_A002 Ovary 1 (OV1) Sorg... 954 0.0
gb|CL148485.1|CL148485 104_328_10593130_116_31783_254 Sorgh... 942 0.0
gb|BI076119.1|BI076119 IP1_25_A08.b1_A002 Immature pannicle... 930 0.0
gb|BI075180.1|BI075180 IP1_17_A09.b1_A002 Immature pannicle... 916 0.0
gb|BE355233.1|BE355233 DG1_113_C09.b1_A002 Dark Grown 1 (DG... 894 0.0
gb|CN129574.1|CN129574 RHOH1_36_E05.b3_A002 Acid- and alkal... 870 0.0
gb|BF317903.1|BF317903 OV1_9_B10.b1_A002 Ovary 1 (OV1) Sorg... 850 0.0
gb|CF433645.1|CF433645 NIT1_28_F11.b1_A002 Nitrogen-deficie... 767 0.0
gb|BG947269.1|BG947269 IP1_3_E08.b1_A002 Immature pannicle ... 765 0.0
gb|CF433703.1|CF433703 NIT1_28_F11.g1_A002 Nitrogen-deficie... 745 0.0
gb|CX607587.1|CX607587 ANR1_29_C09.g1_A002 Anaerobic roots ... 712 0.0
gb|BI076140.1|BI076140 IP1_26_A08.b1_A002 Immature pannicle... 704 0.0
gb|BE917989.1|BE917989 OV1_8_E09.g1_A002 Ovary 1 (OV1) Sorg... 696 0.0
gb|BI211821.1|BI211821 IP1_61_F01.b1_A002 Immature pannicle... 672 0.0
gb|BG048793.1|BG048793 OV1_23_B06.b1_A002 Ovary 1 (OV1) Sor... 668 0.0
gb|BF317768.1|BF317768 OV1_9_B10.g1_A002 Ovary 1 (OV1) Sorg... 660 0.0
gb|BG947780.1|BG947780 IP1_5_A08.b1_A002 Immature pannicle ... 646 0.0
gb|BE355115.1|BE355115 DG1_113_C09.g1_A002 Dark Grown 1 (DG... 638 0.0
gb|CD227257.1|CD227257 CCC1_50_D12.b1_A007 Callus culture/c... 634 e-179
gb|BI074880.1|BI074880 IP1_17_A09.g1_A002 Immature pannicle... 624 e-176
gb|BI643725.1|BI643725 IP1_56_C04.b1_A002 Immature pannicle... 624 e-176
gb|BI141671.1|BI141671 IP1_55_E02.b1_A002 Immature pannicle... 611 e-172
gb|CN129247.1|CN129247 RHOH1_34_G09.b3_A002 Acid- and alkal... 605 e-170
gb|BG050771.1|BG050771 FM1_70_D01.b1_A003 Floral-Induced Me... 593 e-167
gb|BI141589.1|BI141589 IP1_54_D04.b1_A002 Immature pannicle... 587 e-165
gb|CF072531.1|CF072531 FE1_3_B12.b1_A002 Iron-deficient see... 587 e-165
gb|CW482521.1|CW482521 fsbb001f242k13k0 Sorghum methylation... 575 e-161
gb|CD227780.1|CD227780 CCC1_53_B11.g1_A007 Callus culture/c... 563 e-158
gb|CF073545.1|CF073545 FE1_10_F02.g1_A002 Iron-deficient se... 543 e-152
gb|BI211854.1|BI211854 IP1_62_B12.g1_A002 Immature pannicle... 498 e-138
gb|CF073760.1|CF073760 FE1_12_E05.b1_A002 Iron-deficient se... 484 e-134
gb|BI245560.1|BI245560 IP1_67_A11.g1_A002 Immature pannicle... 482 e-133
gb|BI075512.1|BI075512 IP1_21_D10.g1_A002 Immature pannicle... 476 e-132
gb|AW744834.1|AW744834 LG1_384_E04.g1_A002 Light Grown 1 (L... 470 e-130
gb|BI076267.1|BI076267 IP1_25_A08.g1_A002 Immature pannicle... 468 e-129
gb|BG947491.1|BG947491 IP1_5_A08.g1_A002 Immature pannicle ... 464 e-128
gb|CW482520.1|CW482520 fsbb001f242k13f0 Sorghum methylation... 460 e-127
gb|CW378708.1|CW378708 fsbb001f057j16k0 Sorghum methylation... 456 e-126
gb|CW502291.1|CW502291 fsbb001f298i22k0 Sorghum methylation... 448 e-123
gb|BG103164.1|BG103164 RHIZ2_18_H12.g1_A003 Rhizome2 (RHIZ2... 442 e-121
gb|BG052472.1|BG052472 RHIZ2_13_D07.b1_A003 Rhizome2 (RHIZ2... 440 e-121
gb|BG240580.1|BG240580 OV1_31_F08.b1_A002 Ovary 1 (OV1) Sor... 440 e-121
gb|CW113233.1|CW113233 104_487_11105330_148_34550_007 Sorgh... 438 e-120
gb|CW113232.1|CW113232 104_487_11105330_116_34554_007 Sorgh... 432 e-118
gb|CN129665.1|CN129665 RHOH1_36_E05.g1_A002 Acid- and alkal... 430 e-118
gb|BF585752.1|BF585752 FM1_24_B07.b1_A003 Floral-Induced Me... 426 e-117
gb|BF481793.1|BF481793 FM1_20_D08.b1_A003 Floral-Induced Me... 416 e-114
gb|BF585894.1|BF585894 FM1_25_H01.g1_A003 Floral-Induced Me... 392 e-107
gb|BF481979.1|BF481979 FM1_19_G05.b1_A003 Floral-Induced Me... 383 e-104
gb|BG103336.1|BG103336 RHIZ2_18_H12.b1_A003 Rhizome2 (RHIZ2... 381 e-103
gb|BF586580.1|BF586580 FM1_29_A05.b1_A003 Floral-Induced Me... 375 e-101
gb|BI212094.1|BI212094 IP1_61_F01.g1_A002 Immature pannicle... 375 e-101
gb|BF656010.1|BF656010 FM1_42_G12.b1_A003 Floral-Induced Me... 373 e-101
gb|BG050513.1|BG050513 FM1_70_D01.g1_A003 Floral-Induced Me... 359 1e-096
gb|CF072157.1|CF072157 FE1_5_C06.b1_A002 Iron-deficient see... 357 5e-096
gb|BF585972.1|BF585972 FM1_25_H01.b1_A003 Floral-Induced Me... 343 7e-092
gb|CX607839.1|CX607839 ANR1_31_C06.b1_A002 Anaerobic roots ... 343 7e-092
gb|BI141399.1|BI141399 IP1_55_E02.g1_A002 Immature pannicle... 339 1e-090
gb|CW378707.1|CW378707 fsbb001f057j16f0 Sorghum methylation... 317 4e-084
gb|CW443882.1|CW443882 fsbb001f164d11k0 Sorghum methylation... 303 6e-080
gb|BI141322.1|BI141322 IP1_54_D04.g1_A002 Immature pannicle... 291 2e-076
gb|CD213148.1|CD213148 HS1_28_B08.g1_A012 Heat-shocked seed... 278 4e-072
gb|CW502290.1|CW502290 fsbb001f298i22f0 Sorghum methylation... 266 1e-068
gb|CW385344.1|CW385344 fsbb001f068m13f0 Sorghum methylation... 256 1e-065
gb|BG947184.1|BG947184 IP1_3_E08.g1_A002 Immature pannicle ... 242 2e-061
gb|BG049087.1|BG049087 OV1_23_B06.g1_A002 Ovary 1 (OV1) Sor... 238 3e-060
gb|BI141454.1|BI141454 IP1_56_C04.g1_A002 Immature pannicle... 228 3e-057
gb|BE598881.1|BE598881 PI1_83_C07.b1_A002 Pathogen induced ... 224 5e-056
gb|CD227828.1|CD227828 CCC1_56_G02.b1_A007 Callus culture/c... 200 7e-049
gb|BG239994.1|BG239994 OV1_31_F08.g1_A002 Ovary 1 (OV1) Sor... 196 1e-047
gb|BF585666.1|BF585666 FM1_24_B07.g1_A003 Floral-Induced Me... 192 2e-046
gb|BF655935.1|BF655935 FM1_42_G12.g1_A003 Floral-Induced Me... 178 3e-042
gb|BE918278.1|BE918278 OV1_1_D06.g1_A002 Ovary 1 (OV1) Sorg... 176 1e-041
gb|BE918322.1|BE918322 OV1_2_A10.g1_A002 Ovary 1 (OV1) Sorg... 159 2e-036
gb|CD220053.1|CD220053 CCC1_60_F06.g1_A007 Callus culture/c... 157 9e-036
gb|BI245743.1|BI245743 IP1_63_G04.b1_A002 Immature pannicle... 155 4e-035
gb|BF587214.1|BF587214 FM1_33_F03.b2_A003 Floral-Induced Me... 151 6e-034
gb|CW058702.1|CW058702 104_301_10518887_115_30164 Sorghum m... 139 2e-030
gb|BG053825.1|BG053825 RHIZ2_10_C07.b1_A003 Rhizome2 (RHIZ2... 139 2e-030
gb|BI075362.1|BI075362 IP1_19_F06.b1_A002 Immature pannicle... 135 3e-029
gb|BG052407.1|BG052407 RHIZ2_13_D07.g1_A003 Rhizome2 (RHIZ2... 133 1e-028
gb|CW148395.1|CW148395 104_547_11141932_148_35011_016 Sorgh... 131 5e-028
gb|BG948758.1|BG948758 LG1_330_A01.b1_A002 Light Grown 1 (L... 131 5e-028
gb|CD423905.1|CD423905 SA1_2_G12.b1_A002 Salicylic acid-tre... 131 5e-028
gb|BG103131.1|BG103131 RHIZ2_18_E07.g1_A003 Rhizome2 (RHIZ2... 119 2e-024
gb|BI246175.1|BI246175 IP1_67_H10.b1_A002 Immature pannicle... 117 8e-024
gb|BM326022.1|BM326022 PIC1_64_G10.b1_A002 Pathogen-infecte... 117 8e-024
gb|CF072554.1|CF072554 FE1_3_B12.g1_A002 Iron-deficient see... 117 8e-024
gb|CW023463.1|CW023463 104_163_10432463_1_30001 Sorghum met... 115 3e-023
gb|CW296109.1|CW296109 104_777_11461315_116_35620_068 Sorgh... 115 3e-023
gb|BG101839.1|BG101839 RHIZ2_23_A10.g1_A003 Rhizome2 (RHIZ2... 109 2e-021
gb|CW148394.1|CW148394 104_547_11141932_116_35015_016 Sorgh... 105 3e-020
gb|BE356017.1|BE356017 DG1_121_D11.b1_A002 Dark Grown 1 (DG... 101 5e-019
gb|BG465791.1|BG465791 RHIZ2_48_F08.b1_A003 Rhizome2 (RHIZ2... 101 5e-019
gb|BG560234.1|BG560234 RHIZ2_71_G02.b1_A003 Rhizome2 (RHIZ2... 101 5e-019
gb|CF072057.1|CF072057 FE1_20_C10.b1_A002 Iron-deficient se... 101 5e-019
gb|CN134554.1|CN134554 OX1_27_C06.b1_A002 Oxidatively-stres... 101 5e-019
gb|CN127278.1|CN127278 RHOH1_22_C03.b1_A002 Acid- and alkal... 100 2e-018
gb|BG557221.1|BG557221 EM1_44_B10.g1_A002 Embryo 1 (EM1) So... 98 7e-018
gb|CD425359.1|CD425359 SA1_11_F01.g1_A002 Salicylic acid-tr... 98 7e-018
gb|CF071834.1|CF071834 FE1_19_D03.b1_A002 Iron-deficient se... 98 7e-018
gb|BF481629.1|BF481629 FM1_20_D08.g1_A003 Floral-Induced Me... 96 3e-017
gb|BG051983.1|BG051983 RHIZ2_7_D11.g1_A003 Rhizome2 (RHIZ2)... 94 1e-016
gb|BG241543.1|BG241543 RHIZ2_51_H04.g1_A003 Rhizome2 (RHIZ2... 94 1e-016
gb|CN134640.1|CN134640 OX1_27_C06.g1_A002 Oxidatively-stres... 94 1e-016
gb|CW164546.1|CW164546 104_572_11152044_116_36464_038 Sorgh... 92 5e-016
gb|CW224628.1|CW224628 104_662_11203928_116_37202_032 Sorgh... 92 5e-016
gb|BG557440.1|BG557440 EM1_44_B10.b1_A002 Embryo 1 (EM1) So... 92 5e-016
gb|CD233339.1|CD233339 SS1_13_G11.b1_A012 Salt-stressed see... 92 5e-016
gb|CF432727.1|CF432727 NIT1_18_C04.g1_A002 Nitrogen-deficie... 92 5e-016
gb|CF771740.1|CF771740 DSBF1_23_E06.g1_A010 Drought-stresse... 92 5e-016
gb|CN128917.1|CN128917 RHOH1_32_H10.b1_A002 Acid- and alkal... 92 5e-016
gb|CX607922.1|CX607922 ANR1_31_C06.g1_A002 Anaerobic roots ... 92 5e-016
gb|BF586500.1|BF586500 FM1_29_A05.g1_A003 Floral-Induced Me... 90 2e-015
gb|BI245815.1|BI245815 IP1_64_G05.g1_A002 Immature pannicle... 90 2e-015
gb|CD213045.1|CD213045 HS1_28_B08.b1_A012 Heat-shocked seed... 88 7e-015
gb|CN132882.1|CN132882 OX1_8_F12.g1_A002 Oxidatively-stress... 88 7e-015
gb|CW296110.1|CW296110 104_777_11461315_148_35624_068 Sorgh... 86 3e-014
gb|CD219969.1|CD219969 CCC1_60_F06.b1_A007 Callus culture/c... 86 3e-014
gb|CW213542.1|CW213542 104_645_11191609_148_37039_013 Sorgh... 84 1e-013
gb|AW282791.1|AW282791 LG1_290_D05.g1_A002 Light Grown 1 (L... 84 1e-013
gb|BF586023.1|BF586023 FM1_33_F03.b1_A003 Floral-Induced Me... 84 1e-013
gb|BF587843.1|BF587843 FM1_33_F03.g1_A003 Floral-Induced Me... 84 1e-013
gb|CW164547.1|CW164547 104_572_11152044_148_36463_038 Sorgh... 82 4e-013
gb|CW224629.1|CW224629 104_662_11203928_148_37201_032 Sorgh... 82 4e-013
gb|BF480979.1|BF480979 FM1_15_G12.g1_A003 Floral-Induced Me... 82 4e-013
gb|BF481250.1|BF481250 FM1_17_E01.b1_A003 Floral-Induced Me... 82 4e-013
gb|BG102383.1|BG102383 RHIZ2_23_A10.b1_A003 Rhizome2 (RHIZ2... 82 4e-013
gb|BG241497.1|BG241497 RHIZ2_50_A08.g1_A003 Rhizome2 (RHIZ2... 82 4e-013
gb|BG241776.1|BG241776 RHIZ2_50_A08.b1_A003 Rhizome2 (RHIZ2... 82 4e-013
gb|BG465562.1|BG465562 RHIZ2_46_A10.b1_A003 Rhizome2 (RHIZ2... 82 4e-013
gb|BG948020.1|BG948020 IP1_8_D05.b1_A002 Immature pannicle ... 82 4e-013
gb|BI140990.1|BI140990 IP1_41_G10.b1_A002 Immature pannicle... 82 4e-013
gb|CW116979.1|CW116979 104_492_11107412_116_34607_066 Sorgh... 78 7e-012
gb|AW283377.1|AW283377 LG1_223_D12.g1_A002 Light Grown 1 (L... 78 7e-012
gb|BG241885.1|BG241885 RHIZ2_51_H04.b1_A003 Rhizome2 (RHIZ2... 78 7e-012
gb|BG465808.1|BG465808 RHIZ2_48_H02.b1_A003 Rhizome2 (RHIZ2... 78 7e-012
gb|BG947765.1|BG947765 IP1_8_G12.g1_A002 Immature pannicle ... 78 7e-012
gb|BG948058.1|BG948058 IP1_8_G12.b1_A002 Immature pannicle ... 78 7e-012
gb|BI074550.1|BI074550 IP1_16_A11.g1_A002 Immature pannicle... 78 7e-012
gb|CL172543.1|CL172543 104_375_10890237_148_31796_141 Sorgh... 76 3e-011
gb|AW286294.1|AW286294 LG1_330_A01.g1_A002 Light Grown 1 (L... 76 3e-011
gb|BE598541.1|BE598541 PI1_83_C07.g1_A002 Pathogen induced ... 76 3e-011
gb|BG948517.1|BG948517 IP1_10_F08.b1_A002 Immature pannicle... 76 3e-011
gb|BG465855.1|BG465855 RHIZ2_45_D07.g1_A003 Rhizome2 (RHIZ2... 74 1e-010
gb|BI212040.1|BI212040 IP1_63_G04.g1_A002 Immature pannicle... 74 1e-010
gb|CD427212.1|CD427212 SA1_18_E03.b1_A002 Salicylic acid-tr... 74 1e-010
gb|CF430600.1|CF430600 NIT1_3_E06.b1_A002 Nitrogen-deficien... 74 1e-010
gb|CF757235.1|CF757235 DSAF1_15_D07.g1_A011 Drought-stresse... 74 1e-010
gb|CN128754.1|CN128754 RHOH1_31_H09.b1_A002 Acid- and alkal... 74 1e-010
gb|CL192265.1|CL192265 104_415_10940114_116_32261_015 Sorgh... 72 4e-010
gb|BF481487.1|BF481487 FM1_19_G05.g1_A003 Floral-Induced Me... 72 4e-010
gb|CF433027.1|CF433027 NIT1_20_E12.g1_A002 Nitrogen-deficie... 72 4e-010
gb|CF072959.1|CF072959 FE1_27_D01.b1_A002 Iron-deficient se... 70 2e-009
gb|CX618063.1|CX618063 GABR1_37_B05.g1_A002 GA- or brassino... 70 2e-009
gb|CL157591.1|CL157591 104_345_10783695_114_31477_255 Sorgh... 68 7e-009
gb|CL157592.1|CL157592 104_345_10783695_116_31478_255 Sorgh... 68 7e-009
gb|CL197184.1|CL197184 104_424_10943572_114_32383_016 Sorgh... 68 7e-009
gb|CW082277.1|CW082277 104_424_10943572_114_32334_016 Sorgh... 68 7e-009
gb|CW481819.1|CW481819 fsbb001f241j14k0 Sorghum methylation... 68 7e-009
gb|CW496561.1|CW496561 fsbb001f288o02f0 Sorghum methylation... 68 7e-009
gb|BG050984.1|BG050984 FM1_55_A02.b1_A003 Floral-Induced Me... 68 7e-009
gb|CD211868.1|CD211868 HS1_67_A05.b1_A012 Heat-shocked seed... 68 7e-009
gb|CL167974.1|CL167974 104_365_10810478_114_31804_158 Sorgh... 66 3e-008
gb|CL167975.1|CL167975 104_365_10810478_116_31805_158 Sorgh... 66 3e-008
gb|CW031320.1|CW031320 104_259_10500738_116_30398 Sorghum m... 66 3e-008
gb|CW235188.1|CW235188 104_690_11214849_116_37409_041 Sorgh... 66 3e-008
gb|CW235189.1|CW235189 104_690_11214849_148_37413_041 Sorgh... 66 3e-008
gb|CW315001.1|CW315001 104_805_11472128_148_35822_018 Sorgh... 66 3e-008
gb|CW413531.1|CW413531 fsbb001f112l18f0 Sorghum methylation... 66 3e-008
gb|BG103304.1|BG103304 RHIZ2_18_D07.b1_A003 Rhizome2 (RHIZ2... 66 3e-008
gb|CF429881.1|CF429881 PH1_25_C04.b1_A002 Phosphorous-defic... 66 3e-008
gb|CF433456.1|CF433456 NIT1_27_E11.b1_A002 Nitrogen-deficie... 66 3e-008
gb|BZ423529.1|BZ423529 id50c12.g1 WGS-SbicolorF (DH5a methy... 64 1e-007
gb|CW218309.1|CW218309 104_651_11196119_148_37457_082 Sorgh... 64 1e-007
gb|CW344900.1|CW344900 104_847_11488203_116_36201_004 Sorgh... 64 1e-007
gb|CW344901.1|CW344901 104_847_11488203_148_36202_004 Sorgh... 64 1e-007
gb|AW564329.1|AW564329 LG1_290_C06.b1_A002 Light Grown 1 (L... 64 1e-007
gb|BE362654.1|BE362654 DG1_88_F12.b1_A002 Dark Grown 1 (DG1... 64 1e-007
gb|BF481056.1|BF481056 FM1_15_G12.b1_A003 Floral-Induced Me... 64 1e-007
gb|BG051682.1|BG051682 FM1_60_A04.g1_A003 Floral-Induced Me... 64 1e-007
gb|CF428798.1|CF428798 PH1_17_F11.g1_A002 Phosphorous-defic... 64 1e-007
gb|CN128155.1|CN128155 RHOH1_27_H08.b1_A002 Acid- and alkal... 64 1e-007
gb|CW140470.1|CW140470 104_531_11135797_116_34926_063 Sorgh... 62 4e-007
gb|BE126049.1|BE126049 DG1_65_G07.b1_A002 Dark Grown 1 (DG1... 62 4e-007
gb|BF420934.1|BF420934 FM1_5_B03.g1_A003 Floral-Induced Mer... 62 4e-007
gb|BG933529.1|BG933529 WS1_4_E04.b1_A002 Water-stressed 1 (... 62 4e-007
gb|CW335567.1|CW335567 104_834_11483110_116_36083_087 Sorgh... 60 2e-006
gb|BE126016.1|BE126016 DG1_65_B11.b1_A002 Dark Grown 1 (DG1... 60 2e-006
gb|BE357339.1|BE357339 DG1_148_D12.g1_A002 Dark Grown 1 (DG... 58 6e-006
gb|BF655662.1|BF655662 FM1_47_C09.b1_A003 Floral-Induced Me... 58 6e-006
gb|CW335568.1|CW335568 104_834_11483110_148_36104_087 Sorgh... 54 1e-004
gb|CW350794.1|CW350794 fsbb001f012e11k0 Sorghum methylation... 54 1e-004
gb|BG052201.1|BG052201 RHIZ2_7_D11.b1_A003 Rhizome2 (RHIZ2)... 54 1e-004
gb|BG412467.1|BG412467 OV2_34_E11.g1_A002 Ovary 2 (OV2) Sor... 54 1e-004
gb|CW282760.1|CW282760 104_759_11408886_116_35478_031 Sorgh... 52 4e-004
gb|CX621396.1|CX621396 GABR1_57_H04.g1_A002 GA- or brassino... 52 4e-004
gb|AW564350.1|AW564350 LG1_290_D05.b1_A002 Light Grown 1 (L... 50 0.002
gb|BG103825.1|BG103825 RHIZ2_37_C06.b1_A003 Rhizome2 (RHIZ2... 50 0.002
gb|BI140951.1|BI140951 IP1_41_C08.b1_A002 Immature pannicle... 50 0.002
gb|CW031319.1|CW031319 104_259_10500738_114_30397 Sorghum m... 48 0.006
gb|CW180606.1|CW180606 104_595_11163041_116_36639_075 Sorgh... 48 0.006
gb|CW180607.1|CW180607 104_595_11163041_148_36643_075 Sorgh... 48 0.006
gb|CW315969.1|CW315969 104_807_11472644_148_35845_076 Sorgh... 48 0.006
gb|BE357401.1|BE357401 DG1_15_D04.b2_A002 Dark Grown 1 (DG1... 48 0.006
gb|CF430024.1|CF430024 PH1_25_C04.g1_A002 Phosphorous-defic... 48 0.006
gb|CL172542.1|CL172542 104_375_10890237_116_31797_141 Sorgh... 46 0.024
gb|CW350793.1|CW350793 fsbb001f012e11f0 Sorghum methylation... 46 0.024
gb|CW382740.1|CW382740 fsbb001f064o11k0 Sorghum methylation... 46 0.024
gb|CW462663.1|CW462663 fsbb001f210o15k0 Sorghum methylation... 46 0.024
gb|BI074863.1|BI074863 IP1_16_A11.b1_A002 Immature pannicle... 46 0.024
gb|BI098336.1|BI098336 IP1_31_B05.b1_A002 Immature pannicle... 46 0.024
gb|CD212657.1|CD212657 HS1_6_E10.g1_A012 Heat-shocked seedl... 46 0.024
gb|CF073271.1|CF073271 FE1_22_H04.b1_A002 Iron-deficient se... 46 0.024
gb|CF073274.1|CF073274 FE1_22_A05.b1_A002 Iron-deficient se... 46 0.024
gb|CF074199.1|CF074199 FE1_21_C05.g1_A002 Iron-deficient se... 46 0.024
gb|CX608205.1|CX608205 ANR1_37_F12.b1_A002 Anaerobic roots ... 46 0.024
gb|CW056421.1|CW056421 104_298_10517674_114_30156 Sorghum m... 44 0.096
gb|CW233496.1|CW233496 104_686_11213456_148_37375_020 Sorgh... 44 0.096
gb|CW319522.1|CW319522 104_812_11474531_148_35892_046 Sorgh... 44 0.096
gb|BG947539.1|BG947539 IP1_5_G03.g1_A002 Immature pannicle ... 44 0.096
gb|BI099525.1|BI099525 IP1_43_D01.g1_A002 Immature pannicle... 44 0.096
gb|BI141001.1|BI141001 IP1_41_H09.b1_A002 Immature pannicle... 44 0.096
gb|CW024404.1|CW024404 104_164_10434936_1_30002 Sorghum met... 42 0.38
gb|CW366544.1|CW366544 fsbb001f039j12f0 Sorghum methylation... 42 0.38
gb|BG103285.1|BG103285 RHIZ2_18_E07.b1_A003 Rhizome2 (RHIZ2... 42 0.38
gb|BG947832.1|BG947832 IP1_5_G03.b1_A002 Immature pannicle ... 42 0.38
gb|BI076099.1|BI076099 IP1_25_G03.b1_A002 Immature pannicle... 42 0.38
gb|BI245885.1|BI245885 IP1_64_G05.b1_A002 Immature pannicle... 42 0.38
gb|CD210886.1|CD210886 HS1_66_G06.g1_A012 Heat-shocked seed... 42 0.38
gb|CD233360.1|CD233360 SS1_13_G11.g1_A012 Salt-stressed see... 42 0.38
gb|CD427292.1|CD427292 SA1_18_E03.g1_A002 Salicylic acid-tr... 42 0.38
gb|CF071970.1|CF071970 FE1_19_D03.g1_A002 Iron-deficient se... 42 0.38
gb|CN128839.1|CN128839 RHOH1_31_H09.g1_A002 Acid- and alkal... 42 0.38
>gb|CN129331.1|CN129331 RHOH1_34_G09.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_34_G09_A002 5', mRNA sequence
Length = 848
Score = 1503 bits (758), Expect = 0.0
Identities = 818/838 (97%)
Strand = Plus / Minus
Query: 1867 tcaatgccatcaaatctctgtggaaattgtacataacaagttttccttcctagagccgga 1926
||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 848 tcaatgccatcgaatctttgtggaaattgtacataacaagttttccttcgtagagccgga 789
Query: 1927 tccatcatgaagcacattgcttctctaagagctttgctgctattgaagtaatggtcgcaa 1986
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 788 tccatcatgaagcacattgcttctctaagagctttgctgctgttgaagtaatggtcacaa 729
Query: 1987 tccacattgagaagataggcaccatttgtcagcacagcagatacacgaatcagcgcattc 2046
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 728 tccacattgagaagataggcaccatttgtcagcacagcagatacacgaatcagtgcattc 669
Query: 2047 attgcaccagccttcttgtgatgctgaaagcctggtctcttttcacgagagacatagaca 2106
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 668 attgcaccagccttcttgtgatgctggaagcctggtctcttttcacgagagacatagaca 609
Query: 2107 agacgtggtaactcatttccatcagtgtcgagcccaccactgtgccccaagaaaacctga 2166
||||| ||||| ||||||||||||||||| || |||||||||||||||||||| ||||||
Sbjct: 608 agacgcggtaattcatttccatcagtgtcaagaccaccactgtgccccaagaacacctga 549
Query: 2167 atcatgccaggatggtccctaggattattcccaggccatgcagttccatcagccatggtc 2226
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 548 atcatgccaggatggtccctaggattattcccaggccaagcagttccatcagccatggtc 489
Query: 2227 cacccctcttcaggcactttctgtgctttggcaacaagggcattgattcttactttgaat 2286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 cacccctcttcaggcactttctgtgctttggcaacaagggcattgattcttactttgaat 429
Query: 2287 tcttcatactccctcttcattgcgcgtctttccttaacaaatgaaggttgaattttgtcc 2346
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 428 tcttcatactctctcttcattgctcgtctttccttaacaaatgaaggttgaattttgtcc 369
Query: 2347 ttcaggtaatctattttttgagcaaagtaaaattctggagctcttggttcaatattgtgc 2406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ttcaggtaatctattttttgagcaaagtaaaattctggagctcttggttcaatattgtgc 309
Query: 2407 ttcttacaaaagggaacccactttctagcaaattctgcggtttctgagagagactcaaaa 2466
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ttcttacaaaagggaacccactttctagcaaattctgcggtttctgagagagactcaaat 249
Query: 2467 gtcagcatagctgaaccatcatcagaaacatagcatgacactttgtcaacagggtaatcc 2526
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 248 gtcagcatagctgaaccatcatcagaaacatagcatgacactttgtcgacagggtaatcc 189
Query: 2527 acagaaagaatggacaaaacagtgttggctgtgatcagtggaggttccttcaatggatcc 2586
|||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 188 acagcaagaatggacaaaacagtgttggccgtgatcagtggaggttccttcaatggatcc 129
Query: 2587 actgtactgacgaagacatcaatgggagccagctgtgatggctctccctctctatcatac 2646
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 128 actgtactgacgaagacatcaatgggagccagctgtgacggctctccctctctatcatac 69
Query: 2647 ctcaatgcaagcctgtcaagatatgtctcacggttgattggataccattttgggaact 2704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 ctcaatgcaagcctgtcaagatatgtctcacggttgattggataccattttgggaact 11
>gb|CX607503.1|CX607503 ANR1_29_C09.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_29_C09_A002 3', mRNA sequence
Length = 768
Score = 1285 bits (648), Expect = 0.0
Identities = 741/770 (96%), Gaps = 8/770 (1%)
Strand = Plus / Minus
Query: 2378 attctggagctcttggttcaatattgtgcttcttacaaaagggaacccactttctagcaa 2437
|||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 768 attctggagctcttggttca-tattgtgcttcttacaaa-gggaacccactttctagcaa 711
Query: 2438 attctgcggtttctgagagagactcaaaagtcagcatagctgaaccatcatcagaaacat 2497
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 710 attctgcggtttctgagagagactcaaatgtcagcatagctgaaccatcatcagaaacat 651
Query: 2498 agcatgacactttgtcaacagggtaatccacagaaagaatggacaaaacagtgttggctg 2557
|||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 650 agcatgacactttgtcgacagggtaatccacagcaagaatggacaaaacagtgttggccg 591
Query: 2558 tgatcagtggaggttccttcaatggatccactgtactgacgaagacatcaatgggagcca 2617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 tgatcagtggaggttccttcaatggatccactgtactgacgaagacatcaatgggagcca 531
Query: 2618 gctgtgatggctctccctctctatcatacctcaatgcaagcctgtcaagatatgtctcac 2677
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 gctgtgacggctctccctctctatcatacctcaatgcaagcctgtcaagatatgtctcac 471
Query: 2678 ggttgattggataccattttgggaactgatctagaagccaagacaaggcaaaccagacct 2737
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 470 ggttgattggataccattttgggaactgatcaagaagccaagacaaggcaaaccagacct 411
Query: 2738 cgcagataacagatactagccataatccataagcatcacgcactggatgactgacacgat 2797
| |||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||
Sbjct: 410 cacagataacagatactagccacaatccataagcattattcactggatgactgacacgat 351
Query: 2798 actggaagaagaagcacaggatgataagacggagaatgatcactacccggtaaaggttga 2857
| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 350 attggaagaagaagcacaggatgataagacggagaatgatcactatccggtaaaggttga 291
Query: 2858 gctggtttgaggaaattggcacgatacggctcaaaggtagccgtgcatcatcaaccattt 2917
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 290 gctggtttgagggaattggcacaatacggctcaaaggtagccgtgcatcatcaaccattt 231
Query: 2918 gcatatnttctccatttgagccagtcccctccatgtct------cctcctctagcctctg 2971
|||||| ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 230 gcatatcttctccatttgagccagtcccctccatgtctcctcctcctcctctagcctctg 171
Query: 2972 gatatttattagtcacttgcatcatatttttgtcctgtttaaccctccagctctcaactc 3031
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 170 gatatttattagtcacttgcatcatatttttgtcctgtttaactctccagctctcaactc 111
Query: 3032 tttccttccagtcaacactattaagcccataggaattcaagtccttcgaggggtccacaa 3091
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 110 tttccttccagtcaacactattaagcccataagaattcaagtcctttgaggggtccacaa 51
Query: 3092 tcctcacaggaactgggacgcttggatcaacatagctcgatgttggactg 3141
||| ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 50 tccgcacaggaactgggacgcttggatcaacatagcttgatgttggactg 1
>gb|CD227355.1|CD227355 CCC1_50_D12.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_50_D12_A007 5', mRNA sequence
Length = 669
Score = 1201 bits (606), Expect = 0.0
Identities = 650/665 (97%)
Strand = Plus / Minus
Query: 2074 aagcctggtctcttttcacgagagacatagacaagacgtggtaactcatttccatcagtg 2133
|||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 665 aagcctggtctcttttcacgagagacatagacaagacgcggtaattcatttccatcagtg 606
Query: 2134 tcgagcccaccactgtgccccaagaaaacctgaatcatgccaggatggtccctaggatta 2193
|| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 605 tcaagaccaccactgtgccccaagaacacctgaatcatgccaggatggtccctaggatta 546
Query: 2194 ttcccaggccatgcagttccatcagccatggtccacccctcttcaggcactttctgtgct 2253
||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ttcncaggccaagcagttccatcagccatggtccacccctcttcaggcactttctgtgct 486
Query: 2254 ttggcaacaagggcattgattcttactttgaattcttcatactccctcttcattgcgcgt 2313
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 485 ttggcaacaagggcattgattcttactttgaattcttcatactctctcttcattgctcgt 426
Query: 2314 ctttccttaacaaatgaaggttgaattttgtccttcaggtaatctattttttgagcaaag 2373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ctttccttaacaaatgaaggttgaattttgtccttcaggtaatctattttttgagcaaag 366
Query: 2374 taaaattctggagctcttggttcaatattgtgcttcttacaaaagggaacccactttcta 2433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 taaaattctggagctcttggttcaatattgtgcttcttacaaaagggaacccactttcta 306
Query: 2434 gcaaattctgcggtttctgagagagactcaaaagtcagcatagctgaaccatcatcagaa 2493
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 305 gcaaattctgcggtttctgagagagactcaaatgtcagcatagctgaaccatcatcagaa 246
Query: 2494 acatagcatgacactttgtcaacagggtaatccacagaaagaatggacaaaacagtgttg 2553
|||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 245 acatagcatgacactttgtcgacagggtaatccacagcaagaatggacaaaacagtgttg 186
Query: 2554 gctgtgatcagtggaggttccttcaatggatccactgtactgacgaagacatcaatggga 2613
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 gccgtgatcagtggaggttccttcaatggatccactgtactgacgaagacatcaatggga 126
Query: 2614 gccagctgtgatggctctccctctctatcatacctcaatgcaagcctgtcaagatatgtc 2673
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 gccagctgtgacggctctccctctctatcatacctcaatgcaagcctgtcaagatatgtc 66
Query: 2674 tcacggttgattggataccattttgggaactgatctagaagccaagacaaggcaaaccag 2733
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 65 tcacggttgattggataccattttgggaactgatcaagaagccaagacaaggcaaaccag 6
Query: 2734 acctc 2738
|||||
Sbjct: 5 acctc 1
>gb|CW385345.1|CW385345 fsbb001f068m13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f068m13, DNA
sequence
Length = 659
Score = 1092 bits (551), Expect = 0.0
Identities = 622/645 (96%), Gaps = 3/645 (0%)
Strand = Plus / Minus
Query: 377 acgagggggca---gatcttgattgagcctcttcaaataagagtcacggtctcgatcagc 433
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 acgagggggcagacgatcttgattgagcctcttcaaataagagtcacggtctcgatcagc 600
Query: 434 agttgacgccacattgccccaaggcagcagctttctgtgtcggggagatgaaaggatcga 493
|||| || || |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 599 agttcacaccgcattgccccaaggcggcagctttctgtgtcggggagatgaaaggatcga 540
Query: 494 tcttcacccacagcaaggagaagatagatgcaagaaggatggaccagacaatgacgattg 553
||||||||||||||||||||||||| || || || |||||||||||||||||||||||||
Sbjct: 539 tcttcacccacagcaaggagaagatggacgcgaggaggatggaccagacaatgacgattg 480
Query: 554 ttggtgtgcggttctgccttcccatgagacccttgaggaaggggtagagatggaggatca 613
||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||
Sbjct: 479 ttggtgtgcggttctgcctgcccatgagacccttcaggaaggggtacagatggaggatca 420
Query: 614 cccagatcgagaagaacagctttccaaagagcggaccccaggattggtagccactgttaa 673
||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |
Sbjct: 419 cccagatcgagaagaacagctttccaaagagcggaccccaggattggtaaccgctgttga 360
Query: 674 tggcatacgaaattcctgccaccattccgaccaggttaatgacaagaacagtggtcggag 733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tggcatacgaaattcctgccaccattccgaccaggttaatgacaagaacagtggtcggag 300
Query: 734 gaatgagcaaactggtccacttgaacacatatagctcagcaaagtcgccatcctcatcag 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 gaatgagcaaactggtccacttgaacacatatagctcagcaaagtcgccatcctcatcag 240
Query: 794 atgcctttgaggtaactgtgaagttggtatcaatcccagccaacactttcagcagaccct 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 atgcctttgaggtaactgtgaagttggtatcaatcccagccaacactttcagcagaccct 180
Query: 854 ggaacactgcgaagagatgggcagaggtgccaccaataacccaaaactgctcatttctcc 913
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 ggaacaccgcgaagagatgggcagaggtgccaccaataacccaaaactgctcatttctcc 120
Query: 914 accaatcttcaatgccaacaccgctccatctaagctccaatataccagtggcaaaaatgg 973
|||||||||||||||||||||| |||||||| || |||||||||||||||||||||||||
Sbjct: 119 accaatcttcaatgccaacaccactccatctgagttccaatataccagtggcaaaaatgg 60
Query: 974 aggcgaaaagaagaatgaagaacatcccagcataattgctaatct 1018
|||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 59 aggcgaaaagaagaatgaagaacatcccagcatagttactaatct 15
>gb|CL148486.1|CL148486 104_328_10593130_148_31782_254 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10593130, DNA
sequence
Length = 638
Score = 1065 bits (537), Expect = 0.0
Identities = 615/639 (96%), Gaps = 4/639 (0%)
Strand = Plus / Plus
Query: 325 catcctcacctacaacaaaaagaattcccatctagcctcctcaggtatttacacgagggg 384
|||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 1 catcctcatctacaacaaaaa-atttcccatctagcctcctcaggtatttacacgagggg 59
Query: 385 gcaga---tcttgattgagcctcttcaaataagagtcacggtctcgatcagcagttgacg 441
||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 60 gcagacgatcttgattgagcctcttcaaataagagtcacggtctcgatcagcagttcaca 119
Query: 442 ccacattgccccaaggcagcagctttctgtgtcggggagatgaaaggatcgatcttcacc 501
|| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ccgcattgccccaaggcggcagctttctgtgtcggggagatgaaaggatcgatcttcacc 179
Query: 502 cacagcaaggagaagatagatgcaagaaggatggaccagacaatgacgattgttggtgtg 561
||||||||||||||||| || || || |||||||||||||||||||||||||||||||||
Sbjct: 180 cacagcaaggagaagatggacgcgaggaggatggaccagacaatgacgattgttggtgtg 239
Query: 562 cggttctgccttcccatgagacccttgaggaaggggtagagatggaggatcacccagatc 621
||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 240 cggttctgcctgcccatgagacccttcaggaaggggtacagatggaggatcacccagatc 299
Query: 622 gagaagaacagctttccaaagagcggaccccaggattggtagccactgttaatggcatac 681
||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||
Sbjct: 300 gagaagaacagctttccaaagagcggaccccaggattggtaaccgctgttgatggcatac 359
Query: 682 gaaattcctgccaccattccgaccaggttaatgacaagaacagtggtcggaggaatgagc 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gaaattcctgccaccattccgaccaggttaatgacaagaacagtggtcggaggaatgagc 419
Query: 742 aaactggtccacttgaacacatatagctcagcaaagtcgccatcctcatcagatgccttt 801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 aaactggtccacttgaacacatatagctcagcaaagtcgccatcctcatcagatgccttt 479
Query: 802 gaggtaactgtgaagttggtatcaatcccagccaacactttcagcagaccctggaacact 861
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gaggtaactgtgaagttggtatcaatcccagccaacactttcagcagaccctggaacacc 539
Query: 862 gcgaagagatgggcagaggtgccaccaataacccaaaactgctcatttctccaccaatct 921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gcgaagagatgggcagaggtgccaccaataacccaaaactgctcatttctccaccaatct 599
Query: 922 tcaatgccaacaccgctccatctaagctccaatatacca 960
|||||||||||||| |||||||| || ||||||||||||
Sbjct: 600 tcaatgccaacaccactccatctgagttccaatatacca 638
>gb|BI075805.1|BI075805 IP1_21_D10.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 646
Score = 1037 bits (523), Expect = 0.0
Identities = 612/639 (95%), Gaps = 2/639 (0%)
Strand = Plus / Minus
Query: 979 aaaagaagaatgaagaacatccc-agcataattgctaatctcaggaatgataaatttatt 1037
|||||||||||||||| |||||| |||||| || ||||||||||||||||||||||||||
Sbjct: 646 aaaagaagaatgaaga-catccccagcatagttactaatctcaggaatgataaatttatt 588
Query: 1038 ggtaaggaggcagatagcgggaagcacacaataggcaataagcggaatggatgtgattgg 1097
||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 587 ggtaaggagacagatagcaggaagaacacaataggcaataagcggaatggatgtgattgg 528
Query: 1098 atatacaatagtgttgatgtaagccagcctctccaaaagcttcaatcgtccattgtaacc 1157
||| ||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 527 ataaacaatggtgttgatgtaagccagcctctccaaaagcttcagtcggccattgtaacc 468
Query: 1158 ataccagataggacaatgtctactaagcagaatttccactgacccaagagcccaacggag 1217
||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||
Sbjct: 467 ataccagataggacaatgtctgctgagcaaaatttccactgacccaagagcccaacggag 408
Query: 1218 cacctgattaagacgatcggaaagattgattggtgcagaacccttgaaacaaggtcgtgg 1277
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 407 cacctgattaagacgatcagagagattgattggtgcagaacccttgaaacaaggtcgtgg 348
Query: 1278 tggcatgcagtagattgattgccagccccttgcatgcattttaaacccagtcagaatatc 1337
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 347 tggcatgcagtagattgattgccatcctcttgcatgcattttaaacccagtcagaatatc 288
Query: 1338 ctccgttactgaaccatagatccagccaatctcttttccccattcagttttgtcctcata 1397
||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 ctctgtaactgaaccatagatccagccaatctcttttccccattcagttttgtcctcata 228
Query: 1398 tccacaactgatgacatggatagcttcctttagtagagaagctgggtttgttgaaggtgg 1457
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 cccacagctgattacatggatagcttcctttagtagagaagctgggtttgttgaaggtgg 168
Query: 1458 tatgccaccttgtgtcataaaggtggatgcaatgaaaataggagactgaccaaagcgttt 1517
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 167 tatgccaccttgagtcataaaggtggatgcaatgaaaattggagactgaccaaagcgttt 108
Query: 1518 ctccaatttcctctgggacataagcactgacctttcatcctcgtaaccttcaataccctc 1577
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 107 ctccaatttcctctgggacataagcactgacctttcatcctcataaccttcaataccctc 48
Query: 1578 ttcgatgtcttccatattgaagatgggagctgaagattc 1616
||||||||||||||| |||||||||||||||||||||||
Sbjct: 47 ttcgatgtcttccatgttgaagatgggagctgaagattc 9
>gb|AW672122.1|AW672122 LG1_357_F04.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 599
Score = 1029 bits (519), Expect = 0.0
Identities = 573/591 (96%)
Strand = Plus / Minus
Query: 1447 gttgaaggtggtatgccaccttgtgtcataaaggtggatgcaatgaaaataggagactga 1506
||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 599 gttgaaggtggtatgccaccttgagtcataaaggtggatgcaatgaaaattggagactga 540
Query: 1507 ccaaagcgtttctccaatttcctctgggacataagcactgacctttcatcctcgtaacct 1566
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 539 ccaaagcgtttctccaatttcctctgggacataagcactgacctttcatcctcataacct 480
Query: 1567 tcaataccctcttcgatgtcttccatattgaagatgggagctgaagattctgttctcttc 1626
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 479 tcaataccctcttcgatgtcttccatgttgaagatgggagctgaagattctgttctcttc 420
Query: 1627 ataatacggctttgactatccatataactcttgttctttttcttccttctaccacagcag 1686
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 419 ataatacggctttgactatccatataacttttgttctttttcttccttctaccacagcag 360
Query: 1687 ctcttaataacaatgtttggctccagatcagcttcagtcaaaacaggatcgtatccatac 1746
||||||| ||||||||| || ||||||||||||||||||||||||||||| |||||||||
Sbjct: 359 ctcttaacaacaatgttaggttccagatcagcttcagtcaaaacaggatcatatccatac 300
Query: 1747 aaagcctgtctattgaaacagcatcctgttcccacgtaaactggaccctgaatgccatcc 1806
|||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 299 aaagcctgcctattgaaacagcatcctgttcccacatagactggaccctgaatgccatct 240
Query: 1807 agacctttcatgttgatatcaaagaaaactatgttccgattagcatatcgatcgtgcaag 1866
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 239 agacctttcatgttgatatcaaagaaaactatgttccgattagcatatcgatcgtgcatg 180
Query: 1867 tcaatgccatcaaatctctgtggaaattgtacataacaagttttccttcctagagccgga 1926
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 tcaatgccatcgaatctttgtggaaattgtacataacaagttttccttcctagagccgga 120
Query: 1927 tccatcatgaagcacattgcttctctaagagctttgctgctattgaagtaatggtcgcaa 1986
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 119 tccatcatgaagcacattgcttctctaagagctttgctgctgttgaagtaatggtcacaa 60
Query: 1987 tccacattgagaagataggcaccatttgtcagcacagcagatacacgaatc 2037
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 tccacattgagaagataggcaccatttgtcagcacagcagatacacgaatc 9
>gb|BE918108.1|BE918108 OV1_2_A10.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 598
Score = 1027 bits (518), Expect = 0.0
Identities = 572/590 (96%)
Strand = Plus / Minus
Query: 673 atggcatacgaaattcctgccaccattccgaccaggttaatgacaagaacagtggtcgga 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 atggcatacgaaattcctgccaccattccgaccaggttaatgacaagaacagtggtcgga 539
Query: 733 ggaatgagcaaactggtccacttgaacacatatagctcagcaaagtcgccatcctcatca 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ggaatgagcaaactggtccacttgaacacatatagctcagcaaagtcgccatcctcatca 479
Query: 793 gatgcctttgaggtaactgtgaagttggtatcaatcccagccaacactttcagcagaccc 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 gatgcctttgaggtaactgtgaagttggtatcaatcccagccaacactttcagcagaccc 419
Query: 853 tggaacactgcgaagagatgggcagaggtgccaccaataacccaaaactgctcatttctc 912
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 tggaacaccgcgaagagatgggcagaggtgccaccaataacccaaaactgctcatttctc 359
Query: 913 caccaatcttcaatgccaacaccgctccatctaagctccaatataccagtggcaaaaatg 972
||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||
Sbjct: 358 caccaatcttcaatgccaacaccactccatctgagttccaatataccagtggcaaaaatg 299
Query: 973 gaggcgaaaagaagaatgaagaacatcccagcataattgctaatctcaggaatgataaat 1032
||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 298 gaggcgaaaagaagaatgaagaacatcccagcatagttactaatctcaggaatgataaat 239
Query: 1033 ttattggtaaggaggcagatagcgggaagcacacaataggcaataagcggaatggatgtg 1092
|||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 238 ttattggtaaggagacagatagcaggaagaacacaataggcaataagcggaatggatgtg 179
Query: 1093 attggatatacaatagtgttgatgtaagccagcctctccaaaagcttcaatcgtccattg 1152
|||||||| ||||| |||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 178 attggataaacaatggtgttgatgtaagccagcctctccaaaagcttcagtcggccattg 119
Query: 1153 taaccataccagataggacaatgtctactaagcagaatttccactgacccaagagcccaa 1212
|||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||
Sbjct: 118 taaccataccagataggacaatgtctgctgagcaaaatttccactgacccaagagcccaa 59
Query: 1213 cggagcacctgattaagacgatcggaaagattgattggtgcagaaccctt 1262
||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 58 cggagcacctgattaagacgatcagagagattgattggtgcagaaccctt 9
>gb|BE918058.1|BE918058 OV1_1_D06.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 610
Score = 1025 bits (517), Expect = 0.0
Identities = 576/596 (96%)
Strand = Plus / Minus
Query: 667 ctgttaatggcatacgaaattcctgccaccattccgaccaggttaatgacaagaacagtg 726
||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 604 ctgttgatggcatacgaaattcntgccaccattccgaccaggttaatgacaagaacagtg 545
Query: 727 gtcggaggaatgagcaaactggtccacttgaacacatatagctcagcaaagtcgccatcc 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gtcggaggaatgagcaaactggtccacttgaacacatatagctcagcaaagtcgccatcc 485
Query: 787 tcatcagatgcctttgaggtaactgtgaagttggtatcaatcccagccaacactttcagc 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 tcatcagatgcctttgaggtaactgtgaagttggtatcaatcccagccaacactttcagc 425
Query: 847 agaccctggaacactgcgaagagatgggcagaggtgccaccaataacccaaaactgctca 906
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 agaccctggaacaccgcgaagagatgggcagaggtgccaccaataacccaaaactgctca 365
Query: 907 tttctccaccaatcttcaatgccaacaccgctccatctaagctccaatataccagtggca 966
||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||
Sbjct: 364 tttctccaccaatcttcaatgccaacaccactccatctgagttccaatataccagtggca 305
Query: 967 aaaatggaggcgaaaagaagaatgaagaacatcccagcataattgctaatctcaggaatg 1026
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 304 aaaatggaggcgaaaagaagaatgaagaacatcccagcatagttactaatctcaggaatg 245
Query: 1027 ataaatttattggtaaggaggcagatagcgggaagcacacaataggcaataagcggaatg 1086
|||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||
Sbjct: 244 ataaatttattggtaaggagacagatagcaggaagaacacaataggcaataagcggaatg 185
Query: 1087 gatgtgattggatatacaatagtgttgatgtaagccagcctctccaaaagcttcaatcgt 1146
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 184 gatgtgattggataaacaatggtgttgatgtaagccagcctctccaaaagcttcagtcgg 125
Query: 1147 ccattgtaaccataccagataggacaatgtctactaagcagaatttccactgacccaaga 1206
|||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||
Sbjct: 124 ccattgtaaccataccagataggacaatgtctgctgagcaaaatttccactgacccaaga 65
Query: 1207 gcccaacggagcacctgattaagacgatcggaaagattgattggtgcagaaccctt 1262
||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 64 gcccaacggagcacctgattaagacgatcagagagattgattggtgcagaaccctt 9
>gb|BI643766.1|BI643766 IP1_56_G10.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 556
Score = 1007 bits (508), Expect = 0.0
Identities = 538/548 (98%)
Strand = Plus / Minus
Query: 2200 ggccatgcagttccatcagccatggtccacccctcttcaggcactttctgtgctttggca 2259
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ggccaagcagttccatcagccatggtccacccctcttcaggcactttctgtgctttggca 497
Query: 2260 acaagggcattgattcttactttgaattcttcatactccctcttcattgcgcgtctttcc 2319
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 496 acaagggcattgattcttactttgaattcttcatactctctcttcattgctcgtctttcc 437
Query: 2320 ttaacaaatgaaggttgaattttgtccttcaggtaatctattttttgagcaaagtaaaat 2379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ttaacaaatgaaggttgaattttgtccttcaggtaatctattttttgagcaaagtaaaat 377
Query: 2380 tctggagctcttggttcaatattgtgcttcttacaaaagggaacccactttctagcaaat 2439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tctggagctcttggttcaatattgtgcttcttacaaaagggaacccactttctagcaaat 317
Query: 2440 tctgcggtttctgagagagactcaaaagtcagcatagctgaaccatcatcagaaacatag 2499
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 316 tctgcggtttctgagagagactcaaatgtcagcatagctgaaccatcatcagaaacatag 257
Query: 2500 catgacactttgtcaacagggtaatccacagaaagaatggacaaaacagtgttggctgtg 2559
|||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||
Sbjct: 256 catgacactttgtcgacagggtaatccacagcaagaatggacaaaacagtgttggccgtg 197
Query: 2560 atcagtggaggttccttcaatggatccactgtactgacgaagacatcaatgggagccagc 2619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 atcagtggaggttccttcaatggatccactgtactgacgaagacatcaatgggagccagc 137
Query: 2620 tgtgatggctctccctctctatcatacctcaatgcaagcctgtcaagatatgtctcacgg 2679
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 tgtgacggctctccctctctatcatacctcaatgcaagcctgtcaagatatgtctcacgg 77
Query: 2680 ttgattggataccattttgggaactgatctagaagccaagacaaggcaaaccagacctcg 2739
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 76 ttgattggataccattttgggaactgatcaagaagccaagacaaggcaaaccagacctca 17
Query: 2740 cagataac 2747
||||||||
Sbjct: 16 cagataac 9
>gb|BI211927.1|BI211927 IP1_62_B12.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 617
Score = 1003 bits (506), Expect = 0.0
Identities = 585/610 (95%), Gaps = 1/610 (0%)
Strand = Plus / Minus
Query: 978 gaaaagaagaatgaagaacatcccagcataattgctaatctcaggaatgataaatttatt 1037
|||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 617 gaaaagaagaatgaagaacatcccagcatagttactaatctcaggaatgataaatttat- 559
Query: 1038 ggtaaggaggcagatagcgggaagcacacaataggcaataagcggaatggatgtgattgg 1097
||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 558 ggtaaggagacagatagcaggaagaacacaataggcaataagcggaatggatgtgattgg 499
Query: 1098 atatacaatagtgttgatgtaagccagcctctccaaaagcttcaatcgtccattgtaacc 1157
||| ||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 498 ataaacaatggtgttgatgtaagccagcctctccaaaagcttcagtcggccattgtaacc 439
Query: 1158 ataccagataggacaatgtctactaagcagaatttccactgacccaagagcccaacggag 1217
||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||
Sbjct: 438 ataccagataggacaatgtctgctgagcaaaatttccactgacccaagagcccaacggag 379
Query: 1218 cacctgattaagacgatcggaaagattgattggtgcagaacccttgaaacaaggtcgtgg 1277
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 378 cacctgattaagacgatcagagagattgattggtgcagaacccttgaaacaaggtcgtgg 319
Query: 1278 tggcatgcagtagattgattgccagccccttgcatgcattttaaacccagtcagaatatc 1337
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 318 tggcatgcagtagattgattgccatcctcttgcatgcattttaaacccagtcagaatatc 259
Query: 1338 ctccgttactgaaccatagatccagccaatctcttttccccattcagttttgtcctcata 1397
||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ctctgtaactgaaccatagatccagccaatctcttttccccattcagttttgtcctcata 199
Query: 1398 tccacaactgatgacatggatagcttcctttagtagagaagctgggtttgttgaaggtgg 1457
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 cccacagctgattacatggatagcttcctttagtagagaagctgggtttgttgaaggtgg 139
Query: 1458 tatgccaccttgtgtcataaaggtggatgcaatgaaaataggagactgaccaaagcgttt 1517
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 138 tatgccaccttgagtcataaaggtggatgcaatgaaaattggagactgaccaaagcgttt 79
Query: 1518 ctccaatttcctctgggacataagcactgacctttcatcctcgtaaccttcaataccctc 1577
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 78 ctccaatttcctctgggacataagcactgacctttcatcctcataaccttcaataccctc 19
Query: 1578 ttcgatgtct 1587
||||||||||
Sbjct: 18 ttcgatgtct 9
>gb|AW744882.1|AW744882 LG1_384_E04.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 589
Score = 1001 bits (505), Expect = 0.0
Identities = 562/581 (96%)
Strand = Plus / Minus
Query: 618 gatcgagaagaacagctttccaaagagcggaccccaggattggtagccactgttaatggc 677
||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||
Sbjct: 589 gatcgagaagaacagctttccaaagagcggaccccaggattggtaaccgctgttgatggc 530
Query: 678 atacgaaattcctgccaccattccgaccaggttaatgacaagaacagtggtcggaggaat 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 atacgaaattcctgccaccattccgaccaggttaatgacaagaacagtggtcggaggaat 470
Query: 738 gagcaaactggtccacttgaacacatatagctcagcaaagtcgccatcctcatcagatgc 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 gagcaaactggtccacttgaacacatatagctcagcaaagtcgccatcctcatcagatgc 410
Query: 798 ctttgaggtaactgtgaagttggtatcaatcccagccaacactttcagcagaccctggaa 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ctttgaggtaactgtgaagttggtatcaatcccagccaacactttcagcagaccctggaa 350
Query: 858 cactgcgaagagatgggcagaggtgccaccaataacccaaaactgctcatttctccacca 917
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 caccgcgaagagatgggcagaggtgccaccaataacccaaaactgctcatttctccacca 290
Query: 918 atcttcaatgccaacaccgctccatctaagctccaatataccagtggcaaaaatggaggc 977
|||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||
Sbjct: 289 atcttcaatgccaacaccactccatctgagttccaatataccagtggcaaaaatggaggc 230
Query: 978 gaaaagaagaatgaagaacatcccagcataattgctaatctcaggaatgataaatttatt 1037
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 229 gaaaagaagaatgaagaacatcccagcatagttactaatctcaggaatgataaatttatt 170
Query: 1038 ggtaaggaggcagatagcgggaagcacacaataggcaataagcggaatggatgtgattgg 1097
||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 169 ggtaaggagacagatagcaggaagaacacaataggcaataagcggaatggatgtgattgg 110
Query: 1098 atatacaatagtgttgatgtaagccagcctctccaaaagcttcaatcgtccattgtaacc 1157
||| ||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 109 ataaacaatggtgttgatgtaagccagcctctccaaaagcttcagtcggccattgtaacc 50
Query: 1158 ataccagataggacaatgtctactaagcagaatttccactg 1198
||||||||||||||||||||| || |||| |||||||||||
Sbjct: 49 ataccagataggacaatgtctgctgagcaaaatttccactg 9
>gb|BE918570.1|BE918570 OV1_8_E09.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 631
Score = 954 bits (481), Expect = 0.0
Identities = 571/598 (95%), Gaps = 6/598 (1%)
Strand = Plus / Minus
Query: 277 caccggcacggaagaagctaatgaacagagacataactta--tgcaaatccatcctcacc 334
||||||||| ||||||||||| ||||||| ||||||||| |||||||||||||||| |
Sbjct: 605 caccggcaccaaagaagctaataaacagaggcataacttagatgcaaatccatcctcatc 546
Query: 335 tacaacaaaaagaattcccatctagcctcctcaggtatttacacgagggggcaga---tc 391
||||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 545 tacaacaaaaa-atttcccatctagcctcctcaggtatttacacgagggggcagacgatc 487
Query: 392 ttgattgagcctcttcaaataagagtcacggtctcgatcagcagttgacgccacattgcc 451
|||||||||||||||||||||||||||||||||||||||||||||| || || |||||||
Sbjct: 486 ttgattgagcctcttcaaataagagtcacggtctcgatcagcagttcacaccgcattgcc 427
Query: 452 ccaaggcagcagctttctgtgtcggggagatgaaaggatcgatcttcacccacagcaagg 511
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ccaaggcggcagctttctgtgtcggggagatgaaaggatcgatcttcacccacagcaagg 367
Query: 512 agaagatagatgcaagaaggatggaccagacaatgacgattgttggtgtgcggttctgcc 571
||||||| || || || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 agaagatggacgcgaggaggatggaccagacaatgacgattgttggtgtgcggttctgcc 307
Query: 572 ttcccatgagacccttgaggaaggggtagagatggaggatcacccagatcgagaagaaca 631
| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 306 tgcccatgagacccttcaggaaggggtacagatggaggatcacccagatcgagaagaaca 247
Query: 632 gctttccaaagagcggaccccaggattggtagccactgttaatggcatacgaaattcctg 691
||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||
Sbjct: 246 gctttccaaagagcggaccccaggattggtaaccgctgttgatggcatacgaaattcctg 187
Query: 692 ccaccattccgaccaggttaatgacaagaacagtggtcggaggaatgagcaaactggtcc 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ccaccattccgaccaggttaatgacaagaacagtggtcggaggaatgagcaaactggtcc 127
Query: 752 acttgaacacatatagctcagcaaagtcgccatcctcatcagatgcctttgaggtaactg 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 acttgaacacatatagctcagcaaagtcgccatcctcatcagatgcctttgaggtaactg 67
Query: 812 tgaagttggtatcaatcccagccaacactttcagcagaccctggaacactgcgaagag 869
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 66 tgaagttggtatcaatcccagccaacactttcagcagaccctggaacaccgcgaagag 9
>gb|CL148485.1|CL148485 104_328_10593130_116_31783_254 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10593130, DNA
sequence
Length = 591
Score = 942 bits (475), Expect = 0.0
Identities = 526/543 (96%)
Strand = Plus / Minus
Query: 476 gggagatgaaaggatcgatcttcacccacagcaaggagaagatagatgcaagaaggatgg 535
||||||||||||||||||||||||||||||||||||||||||| | || || |||||||
Sbjct: 591 gggagatgaaaggatcgatcttcacccacagcaaggagaagatggtcgcgaggaggatgg 532
Query: 536 accagacaatgacgattgttggtgtgcggttctgccttcccatgagacccttgaggaagg 595
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 531 accagacaatgacgattgttggtgtgcggttctgcctgcccatgagacccttcaggaagg 472
Query: 596 ggtagagatggaggatcacccagatcgagaagaacagctttccaaagagcggaccccagg 655
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 ggtacagatggaggatcacccagatcgagaagaacagctttccaaagagcggaccccagg 412
Query: 656 attggtagccactgttaatggcatacgaaattcctgccaccattccgaccaggttaatga 715
||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 attggtaaccgctgttgatggcatacgaaattcctgccaccattccgaccaggttaatga 352
Query: 716 caagaacagtggtcggaggaatgagcaaactggtccacttgaacacatatagctcagcaa 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 caagaacagtggtcggaggaatgagcaaactggtccacttgaacacatatagctcagcaa 292
Query: 776 agtcgccatcctcatcagatgcctttgaggtaactgtgaagttggtatcaatcccagcca 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 agtcgccatcctcatcagatgcctttgaggtaactgtgaagttggtatcaatcccagcca 232
Query: 836 acactttcagcagaccctggaacactgcgaagagatgggcagaggtgccaccaataaccc 895
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 231 acactttcagcagaccctggaacaccgcgaagagatgggcagaggtgccaccaataaccc 172
Query: 896 aaaactgctcatttctccaccaatcttcaatgccaacaccgctccatctaagctccaata 955
|||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||
Sbjct: 171 aaaactgctcatttctccaccaatcttcaatgccaacaccactccatctgagttccaata 112
Query: 956 taccagtggcaaaaatggaggcgaaaagaagaatgaagaacatcccagcataattgctaa 1015
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 111 taccagtggcaaaaatggaggcgaaaagaagaatgaagaacatcccagcatagttactaa 52
Query: 1016 tct 1018
|||
Sbjct: 51 tct 49
>gb|BI076119.1|BI076119 IP1_25_A08.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 556
Score = 930 bits (469), Expect = 0.0
Identities = 528/548 (96%)
Strand = Plus / Minus
Query: 1399 ccacaactgatgacatggatagcttcctttagtagagaagctgggtttgttgaaggtggt 1458
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 ccacagctgattacatggatagcttcctttagtagagaagctgggtttgttgaaggtggt 496
Query: 1459 atgccaccttgtgtcataaaggtggatgcaatgaaaataggagactgaccaaagcgtttc 1518
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 495 atgccacctgnagtcataaaggtggatgcaatgaaaattggagactgaccaaagcgtttc 436
Query: 1519 tccaatttcctctgggacataagcactgacctttcatcctcgtaaccttcaataccctct 1578
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 435 tccaatttcctctgggacataagcactgacctttcatcctcataaccttcaataccctct 376
Query: 1579 tcgatgtcttccatattgaagatgggagctgaagattctgttctcttcataatacggctt 1638
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tcgatgtcttccatgttgaagatgggagctgaagattctgttctcttcataatacggctt 316
Query: 1639 tgactatccatataactcttgttctttttcttccttctaccacagcagctcttaataaca 1698
||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 315 tgactatccatataacttttgttctttttcttccttctaccacagcagctcttaacaaca 256
Query: 1699 atgtttggctccagatcagcttcagtcaaaacaggatcgtatccatacaaagcctgtcta 1758
||||| || ||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 255 atgttaggttccagatcagcttcagtcaaaacaggatcatatccatacaaagcctgccta 196
Query: 1759 ttgaaacagcatcctgttcccacgtaaactggaccctgaatgccatccagacctttcatg 1818
||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||
Sbjct: 195 ttgaaacagcatcctgttcccacatagactggaccctgaatgccatctagacctttcatg 136
Query: 1819 ttgatatcaaagaaaactatgttccgattagcatatcgatcgtgcaagtcaatgccatca 1878
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 135 ttgatatcaaagaaaactatgttccgattagcatatcgatcgtgcatgtcaatgccatcg 76
Query: 1879 aatctctgtggaaattgtacataacaagttttccttcctagagccggatccatcatgaag 1938
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 aatctttgtggaaattgtacataacaagttttccttcctagagccggatccatcatgaag 16
Query: 1939 cacattgc 1946
||||||||
Sbjct: 15 cacattgc 8
>gb|BI075180.1|BI075180 IP1_17_A09.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 559
Score = 916 bits (462), Expect = 0.0
Identities = 522/542 (96%)
Strand = Plus / Minus
Query: 1698 aatgtttggctccagatcagcttcagtcaaaacaggatcgtatccatacaaagcctgtct 1757
|||||| || ||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 550 aatgttaggttccagatcagcttcagtcaaaacaggatcatatccatacaaagcctgcct 491
Query: 1758 attgaaacagcatcctgttcccacgtaaactggaccctgaatgccatccagacctttcat 1817
|||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||
Sbjct: 490 attgaaacagcatcctgttcccacatagactggaccctgaatgccatctagacctttcat 431
Query: 1818 gttgatatcaaagaaaactatgttccgattagcatatcgatcgtgcaagtcaatgccatc 1877
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 430 gttgatatcaaagaaaactatgttccgattagcatatcgatcgtgcatgtcaatgccatc 371
Query: 1878 aaatctctgtggaaattgtacataacaagttttccttcctagagccggatccatcatgaa 1937
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gaatctttgtggaaattgtacataacaagttttccttcctagagccggatccatcatgaa 311
Query: 1938 gcacattgcttctctaagagctttgctgctattgaagtaatggtcgcaatccacattgag 1997
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 310 gcacattgcttctctaagagctttgctgctgttgaagtaatggtcacaatccacattgag 251
Query: 1998 aagataggcaccatttgtcagcacagcagatacacgaatcagcgcattcattgcaccagc 2057
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 250 aagataggcaccatttgtcagcacagcagatacacgaatcagtgcattcattgcaccagc 191
Query: 2058 cttcttgtgatgctgaaagcctggtctcttttcacgagagacatagacaagacgtggtaa 2117
||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 190 cttcttgtgatgctggaagcctggtctcttttcacgagagacatagacaagacgcggtaa 131
Query: 2118 ctcatttccatcagtgtcgagcccaccactgtgccccaagaaaacctgaatcatgccagg 2177
||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||
Sbjct: 130 ttcatttccatcagtgtcaagaccaccactgtgccccaagaacacctgaatcatgccagg 71
Query: 2178 atggtccctaggattattcccaggccatgcagttccatcagccatggtccacccctcttc 2237
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 70 atggtccctaggattattcccaggccaagcagttccatcagccatggtccacccctcttc 11
Query: 2238 ag 2239
||
Sbjct: 10 ag 9
>gb|BE355233.1|BE355233 DG1_113_C09.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 494
Score = 894 bits (451), Expect = 0.0
Identities = 477/486 (98%)
Strand = Plus / Minus
Query: 2192 tattcccaggccatgcagttccatcagccatggtccacccctcttcaggcactttctgtg 2251
||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tattcncaggccaagcagttccatcagccatggtccacccctcttcaggcactttctgtg 435
Query: 2252 ctttggcaacaagggcattgattcttactttgaattcttcatactccctcttcattgcgc 2311
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 434 ctttggcaacaagggcattgattcttactttgaattcttcatactctctcttcattgctc 375
Query: 2312 gtctttccttaacaaatgaaggttgaattttgtccttcaggtaatctattttttgagcaa 2371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gtctttccttaacaaatgaaggttgaattttgtccttcaggtaatctattttttgagcaa 315
Query: 2372 agtaaaattctggagctcttggttcaatattgtgcttcttacaaaagggaacccactttc 2431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 agtaaaattctggagctcttggttcaatattgtgcttcttacaaaagggaacccactttc 255
Query: 2432 tagcaaattctgcggtttctgagagagactcaaaagtcagcatagctgaaccatcatcag 2491
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 254 tagcaaattctgcggtttctgagagagactcaaatgtcagcatagctgaaccatcatcag 195
Query: 2492 aaacatagcatgacactttgtcaacagggtaatccacagaaagaatggacaaaacagtgt 2551
|||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 194 aaacatagcatgacactttgtcgacagggtaatccacagcaagaatggacaaaacagtgt 135
Query: 2552 tggctgtgatcagtggaggttccttcaatggatccactgtactgacgaagacatcaatgg 2611
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 tggccgtgatcagtggaggttccttcaatggatccactgtactgacgaagacatcaatgg 75
Query: 2612 gagccagctgtgatggctctccctctctatcatacctcaatgcaagcctgtcaagatatg 2671
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 gagccagctgtgacggctctccctctctatcatacctcaatgcaagcctgtcaagatatg 15
Query: 2672 tctcac 2677
||||||
Sbjct: 14 tctcac 9
>gb|CN129574.1|CN129574 RHOH1_36_E05.b3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_36_E05_A002 3', mRNA sequence
Length = 768
Score = 870 bits (439), Expect = 0.0
Identities = 681/753 (90%), Gaps = 24/753 (3%)
Strand = Plus / Minus
Query: 18 tacaacagctgcctt---atatagttgtgctaatagattacagtgttctgactgtctgca 74
||||||||||||||| ||||||||||||||| | ||||||||||||||||||| |||
Sbjct: 749 tacaacagctgcctttttatatagttgtgctaaaaaattacagtgttctgactgtttgct 690
Query: 75 cacattccaaagaatgtagtc--tttgtgtataaataacagcattgccaatataagctcg 132
|||| | ||||||||||| || | || ||||||||||||||||||||| |||| | |||
Sbjct: 689 cacaatacaaagaatgta-tcagtctgcgtataaataacagcattgcca-tata-gttcg 633
Query: 133 tgtgaacagttcccacaaacaaatgataatttactctaaaacaataaactgcacgcataa 192
|||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 632 tgtgaacagttccctcaaacaaatgataatttactctaaaacaataaacaccacgtataa 573
Query: 193 caaaacttcaaaattcacatcttacgctgctggctggcgctacatggaaggtagaaa-gg 251
|||| | ||||||||||| ||||||||||||| || |||||| | |||||| ||| ||
Sbjct: 572 aaaaaatgcaaaattcacaatttacgctgctggccggtgctacaggcaaggtaaaaaagg 513
Query: 252 ctccgtgattcttagtccgcagcagca---------ccggcacggaagaagctaatgaac 302
|||| ||||| |||||||||||||||| ||||||| ||||||||||| |||
Sbjct: 512 ctccatgatttttagtccgcagcagcagcaccgtcaccggcaccaaagaagctaataaac 453
Query: 303 agagacataactta--tgcaaatccatcctcacctacaacaaaaagaattcccatctagc 360
|||| ||||||||| |||||||||||||||| |||||||||||| | ||||||||||||
Sbjct: 452 agaggcataacttagatgcaaatccatcctcatctacaacaaaaa-atttcccatctagc 394
Query: 361 ctcctcaggtatttacacgagggggcaga---tcttgattgagcctcttcaaataagagt 417
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 393 ctcctcaggtatttacacgagggggcagacgatcttgattgagcctcttcaaataagagt 334
Query: 418 cacggtctcgatcagcagttgacgccacattgccccaaggcagcagctttctgtgtcggg 477
|||||||||||||||||||| || || |||||||||||||| ||||||||||||||||||
Sbjct: 333 cacggtctcgatcagcagttcacaccgcattgccccaaggcggcagctttctgtgtcggg 274
Query: 478 gagatgaaaggatcgatcttcacccacagcaaggagaagatagatgcaagaaggatggac 537
||||||||||||||||||||||||||||||||||| || || || || || |||||||||
Sbjct: 273 gagatgaaaggatcgatcttcacccacagcaaggaaaaaatggacgcgaggaggatggac 214
Query: 538 cagacaatgacgattgttggtgtgcggttctgccttcccatgagacccttgaggaagggg 597
|| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 213 caaacaatgacgattgttggtgtgcggttctgcctgcccatgagacccttcaggaagggg 154
Query: 598 tagagatggaggatcacccagatcgagaagaacagctttccaaagagcggaccccaggat 657
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 tacagatggaggatcacccagatcgagaagaacagctttccaaagagcggaccccaggat 94
Query: 658 tggtagccactgttaatggcatacgaaattcctgccaccattccgaccaggttaatgaca 717
||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 tggtaaccgctgttgatggcatacgaaattcctgccaccattccgaccaggttaatgaca 34
Query: 718 agaacagtggtcggaggaatgagcaaactggtc 750
|||||||||||||||||||||||||||||||||
Sbjct: 33 agaacagtggtcggaggaatgagcaaactggtc 1
>gb|BF317903.1|BF317903 OV1_9_B10.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 511
Score = 850 bits (429), Expect = 0.0
Identities = 485/503 (96%), Gaps = 3/503 (0%)
Strand = Plus / Minus
Query: 370 tatttacacgagggggcaga---tcttgattgagcctcttcaaataagagtcacggtctc 426
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 511 tatttacacgagggggcagacgatcttgattgagcctcttcaaataagagtcacggtctc 452
Query: 427 gatcagcagttgacgccacattgccccaaggcagcagctttctgtgtcggggagatgaaa 486
||||||||||| || || |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 451 gatcagcagttcacaccgcattgccccaaggcggcagctttctgtgtcggggagatgaaa 392
Query: 487 ggatcgatcttcacccacagcaaggagaagatagatgcaagaaggatggaccagacaatg 546
|||||||||||||||||||||||||||||||| || || || ||||||||||||||||||
Sbjct: 391 ggatcgatcttcacccacagcaaggagaagatggacgcgaggaggatggaccagacaatg 332
Query: 547 acgattgttggtgtgcggttctgccttcccatgagacccttgaggaaggggtagagatgg 606
|||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||
Sbjct: 331 acgattgttggtgtgcggttctgcctgcccatgagacccttcaggaaggggtacagatgg 272
Query: 607 aggatcacccagatcgagaagaacagctttccaaagagcggaccccaggattggtagcca 666
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 271 aggatcacccagatcgagaagaacagctttccaaagagcggaccccaggattggtaaccg 212
Query: 667 ctgttaatggcatacgaaattcctgccaccattccgaccaggttaatgacaagaacagtg 726
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 ctgttgatggcatacgaaattcctgccaccattccgaccaggttaatgacaagaacagtg 152
Query: 727 gtcggaggaatgagcaaactggtccacttgaacacatatagctcagcaaagtcgccatcc 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 gtcggaggaatgagcaaactggtccacttgaacacatatagctcagcaaagtcgccatcc 92
Query: 787 tcatcagatgcctttgaggtaactgtgaagttggtatcaatcccagccaacactttcagc 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 tcatcagatgcctttgaggtaactgtgaagttggtatcaatcccagccaacactttcagc 32
Query: 847 agaccctggaacactgcgaagag 869
|||||||||||||| ||||||||
Sbjct: 31 agaccctggaacaccgcgaagag 9
>gb|CF433645.1|CF433645 NIT1_28_F11.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_28_F11_A002 3', mRNA sequence
Length = 688
Score = 767 bits (387), Expect = 0.0
Identities = 620/689 (89%), Gaps = 24/689 (3%)
Strand = Plus / Minus
Query: 18 tacaacagctgcctt---atatagttgtgctaatagattacagtgttctgactgtctgca 74
||||||||||||||| ||||||||||||||| | ||||||||||||||||||| |||
Sbjct: 685 tacaacagctgcctttttatatagttgtgctaagaaattacagtgttctgactgtttgct 626
Query: 75 cacattccaaagaatgtagtc--tttgtgtataaataacagcattgccaatataagctcg 132
|||| | ||||||||||| || | || ||||||||||||||||||||| |||| | |||
Sbjct: 625 cacaatacaaagaatgta-tcagtctgcgtataaataacagcattgcca-tata-gttcg 569
Query: 133 tgtgaacagttcccacaaacaaatgataatttactctaaaacaataaactgcacgcataa 192
|||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 568 tgtgaacagttccctcaaacaaatgataatttactctaaaacaataaacaccacgtataa 509
Query: 193 caaaacttcaaaattcacatcttacgctgctggctggcgctacatggaaggtagaaa-gg 251
|||| | ||||||||||| ||||||||||||| || |||||| | |||||||||| ||
Sbjct: 508 aaaaaatgcaaaattcacaatttacgctgctggccggtgctacaggcaaggtagaaaagg 449
Query: 252 ctccgtgattcttagtccgcagcagca---------ccggcacggaagaagctaatgaac 302
|||| ||||| |||||||||||||||| ||||||| ||||||||||| |||
Sbjct: 448 ctccatgatttttagtccgcagcagcagcaccgtcaccggcaccaaagaagctaataaac 389
Query: 303 agagacataactta--tgcaaatccatcctcacctacaacaaaaagaattcccatctagc 360
|||| ||||||||| |||||||||||||||| |||||||||||| | ||||||||||||
Sbjct: 388 agaggcataacttagatgcaaatccatcctcatctacaacaaaaa-atttcccatctagc 330
Query: 361 ctcctcaggtatttacacgagggggcaga---tcttgattgagcctcttcaaataagagt 417
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 329 ctcctcaggtatttacacgagggggcagacgatcttgattgagcctcttcaaataagagt 270
Query: 418 cacggtctcgatcagcagttgacgccacattgccccaaggcagcagctttctgtgtcggg 477
|||||||||||||||||||| || || |||||||||||||| ||||||||||||||||||
Sbjct: 269 cacggtctcgatcagcagttcacaccgcattgccccaaggcggcagctttctgtgtcggg 210
Query: 478 gagatgaaaggatcgatcttcacccacagcaaggagaagatagatgcaagaaggatggac 537
||||||||||||||||||||||||| ||||||||||||||| || || || |||||||||
Sbjct: 209 gagatgaaaggatcgatcttcacccgcagcaaggagaagatggacgcgaggaggatggac 150
Query: 538 cagacaatgacgattgttggtgtgcggttctgccttcccatgagacccttgaggaagggg 597
||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 149 cagacaatgacgattgttggtgtgcggttctgcctgcccatgagacccttcaggaagggg 90
Query: 598 tagagatggaggatcacccagatcgagaagaacagctttccaaagagcggaccccaggat 657
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 tacagatggaggatcacccagatcgagaagaacagctttccaaagagcggaccccaggat 30
Query: 658 tggtagccactgttaatggcatacgaaat 686
||||| || ||||| ||||||||||||||
Sbjct: 29 tggtaaccgctgttgatggcatacgaaat 1
>gb|BG947269.1|BG947269 IP1_3_E08.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 465
Score = 765 bits (386), Expect = 0.0
Identities = 427/441 (96%)
Strand = Plus / Minus
Query: 2522 aatccacagaaagaatggacaaaacagtgttggctgtgatcagtggaggttccttcaatg 2581
||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 465 aatccacagcaagaatggacaaaacagtgttggccgtgatcagtggaggttccttcaatg 406
Query: 2582 gatccactgtactgacgaagacatcaatgggagccagctgtgatggctctccctctctat 2641
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 405 gatccactgtactgacgaagacatcaatgggagccagctgtgacggctctccctctctat 346
Query: 2642 catacctcaatgcaagcctgtcaagatatgtctcacggttgattggataccattttggga 2701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 catacctcaatgcaagcctgtcaagatatgtctcacggttgattggataccattttggga 286
Query: 2702 actgatctagaagccaagacaaggcaaaccagacctcgcagataacagatactagccata 2761
||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 285 actgatcaagaagccaagacaaggcaaaccagacctcacagataacagatactagccaca 226
Query: 2762 atccataagcatcacgcactggatgactgacacgatactggaagaagaagcacaggatga 2821
|||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 225 atccataagcattattcactggatgactgacacgatattggaagaagaagcacaggatga 166
Query: 2822 taagacggagaatgatcactacccggtaaaggttgagctggtttgaggaaattggcacga 2881
||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |
Sbjct: 165 taagacggagaatgatcactatccggtaaaggttgagctggtttgagggaattggcacaa 106
Query: 2882 tacggctcaaaggtagccgtgcatcatcaaccatttgcatatnttctccatttgagccag 2941
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 105 tacggctcaaaggtagccgtgcatcatcaaccatttgcatatcttctccatttgagccag 46
Query: 2942 tcccctccatgtctcctcctc 2962
|||||||||||||||||||||
Sbjct: 45 tcccctccatgtctcctcctc 25
>gb|CF433703.1|CF433703 NIT1_28_F11.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor cDNA
clone NIT1_28_F11_A002 5', mRNA sequence
Length = 452
Score = 745 bits (376), Expect = 0.0
Identities = 433/452 (95%)
Strand = Plus / Minus
Query: 795 tgcctttgaggtaactgtgaagttggtatcaatcccagccaacactttcagcagaccctg 854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tgcctttgaggtaactgtgaagttggtatcaatcccagccaacactttcagcagaccctg 393
Query: 855 gaacactgcgaagagatgggcagaggtgccaccaataacccaaaactgctcatttctcca 914
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gaacaccgcgaagagatgggcagaggtgccaccaataacccaaaactgctcatttctcca 333
Query: 915 ccaatcttcaatgccaacaccgctccatctaagctccaatataccagtggcaaaaatgga 974
||||||||||||||||||||| |||||| | || ||||||||||||||||||||||||||
Sbjct: 332 ccaatcttcaatgccaacaccactccatttgagttccaatataccagtggcaaaaatgga 273
Query: 975 ggcgaaaagaagaatgaagaacatcccagcataattgctaatctcaggaatgataaattt 1034
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 272 ggcgaaaagaagaatgaagaacatcccagcatagttactaatctcaggaatgataaattt 213
Query: 1035 attggtaaggaggcagatagcgggaagcacacaataggcaataagcggaatggatgtgat 1094
|||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 212 attggtaaggagacagatagcaggaagaacacaataggcaataagcggaatggatgtgat 153
Query: 1095 tggatatacaatagtgttgatgtaagccagcctctccaaaagcttcaatcgtccattgta 1154
|||||| ||||| |||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 152 tggataaacaatggtgttgatgtaagccagcctctccaaaagcttcagtcggccattgta 93
Query: 1155 accataccagataggacaatgtctactaagcagaatttccactgacccaagagcccaacg 1214
|||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||
Sbjct: 92 accataccagataggacaatgtctgctgagcaaaatttccactgacccaagagcccaacg 33
Query: 1215 gagcacctgattaagacgatcggaaagattga 1246
||||||||||||||||||||| || |||||||
Sbjct: 32 gagcacctgattaagacgatcagagagattga 1
>gb|CX607587.1|CX607587 ANR1_29_C09.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_29_C09_A002 5', mRNA sequence
Length = 606
Score = 712 bits (359), Expect = 0.0
Identities = 400/414 (96%)
Strand = Plus / Plus
Query: 2549 tgttggctgtgatcagtggaggttccttcaatggatccactgtactgacgaagacatcaa 2608
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 tgttggccgtgatcagtggaggttccttcaatggatccactgtactgacgaagacatcaa 246
Query: 2609 tgggagccagctgtgatggctctccctctctatcatacctcaatgcaagcctgtcaagat 2668
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tgggagccagctgtgacggctctccctctctatcatacctcaatgcaagcctgtcaagat 306
Query: 2669 atgtctcacggttgattggataccattttgggaactgatctagaagccaagacaaggcaa 2728
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 307 atgtctcacggttgattggataccattttgggaactgatcaagaagccaagacaaggcaa 366
Query: 2729 accagacctcgcagataacagatactagccataatccataagcatcacgcactggatgac 2788
|||||||||| |||||||||||||||||||| ||||||||||||| | |||||||||||
Sbjct: 367 accagacctcacagataacagatactagccacaatccataagcattattcactggatgac 426
Query: 2789 tgacacgatactggaagaagaagcacaggatgataagacggagaatgatcactacccggt 2848
|||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 427 tgacaccatattggaagaagaagcacaggatgataagacggagaatgatcactatccggt 486
Query: 2849 aaaggttgagctggtttgaggaaattggcacgatacggctcaaaggtagccgtgcatcat 2908
||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 487 aaaggttgagctggtttgagggaattggcacaatacggctcaaaggtagccgtgcatcat 546
Query: 2909 caaccatttgcatatnttctccatttgagccagtcccctccatgtctcctcctc 2962
||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 547 caaccatttgcatatcttctccatttgagccagtcccctccatgtctcctcctc 600
Score = 115 bits (58), Expect = 3e-023
Identities = 91/102 (89%)
Strand = Plus / Minus
Query: 3726 ggcggagaccaatcggcccgtgcgggcctctagatccgagcggcgttggcgaccaccatg 3785
|||||||||| |||||||||||||||||||||||||||||||||| | | |||||||||
Sbjct: 120 ggcggagaccgatcggcccgtgcgggcctctagatccgagcggcggcgaccaccaccatg 61
Query: 3786 ccccaaattcctcccgctcgatcgctgcaatgccgcgcagtg 3827
|||| || |||||| ||| |||||||||||||||||||||
Sbjct: 60 ccccggatccctccctctccctcgctgcaatgccgcgcagtg 19
>gb|BI076140.1|BI076140 IP1_26_A08.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 418
Score = 704 bits (355), Expect = 0.0
Identities = 397/411 (96%)
Strand = Plus / Minus
Query: 1536 cataagcactgacctttcatcctcgtaaccttcaataccctcttcgatgtcttccatatt 1595
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 418 cataagcactgacctttcatcctcataaccttcaataccctcttcgatgtcttccatgtt 359
Query: 1596 gaagatgggagctgaagattctgttctcttcataatacggctttgactatccatataact 1655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gaagatgggagctgaagattctgttctcttcataatacggctttgactatccatataact 299
Query: 1656 cttgttctttttcttccttctaccacagcagctcttaataacaatgtttggctccagatc 1715
||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||
Sbjct: 298 tttgttctttttcttccttctaccacagcagctcttaacaacaatgttaggttccagatc 239
Query: 1716 agcttcagtcaaaacaggatcgtatccatacaaagcctgtctattgaaacagcatcctgt 1775
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 238 agcttcagtcaaaacaggatcatatccatacaaagcctgcctattgaaacagcatcctgt 179
Query: 1776 tcccacgtaaactggaccctgaatgccatccagacctttcatgttgatatcaaagaaaac 1835
|||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 178 tcccacatagactggaccctgaatgccatctagacctttcatgttgatatcaaagaaaac 119
Query: 1836 tatgttccgattagcatatcgatcgtgcaagtcaatgccatcaaatctctgtggaaattg 1895
||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||
Sbjct: 118 tatgttccgattagcatatcgatcgtgcatgtcaatgccatcgaatctttgtggaaattg 59
Query: 1896 tacataacaagttttccttcctagagccggatccatcatgaagcacattgc 1946
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 tacataacaagttttccttcctagagccggatccatcatgaagcacattgc 8
>gb|BE917989.1|BE917989 OV1_8_E09.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 629
Score = 696 bits (351), Expect = 0.0
Identities = 565/627 (90%), Gaps = 22/627 (3%)
Strand = Plus / Minus
Query: 34 tatagttgtgctaatagattacagtgttctgactgtctgcacacattccaaagaatgtag 93
|||||||||||||| | ||||||||||||||||||| ||| |||| | |||||||||||
Sbjct: 622 tatagttgtgctaaga-attacagtgttctgactgtttgctcacaatacaaagaatgta- 565
Query: 94 tc--tttgtgtataaataacagcattgccaatataagctcgtgtgaacagttcccacaaa 151
|| | || ||||||||||||||||||||| |||| | ||||||||||||||||| ||||
Sbjct: 564 tcagtctgcgtataaataacagcattgcca-tata-gttcgtgtgaacagttccctcaaa 507
Query: 152 caaatgataatttactctaaaacaataaactgcacgcataacaaaacttcaaaattcaca 211
|||||||||||||||||||||||||||||| |||| |||| |||| | |||||||||||
Sbjct: 506 caaatgataatttactctaaaacaataaacaccacgtataaaaaaaatgcaaaattcaca 447
Query: 212 tcttacgctgctggctggcgctacatggaaggtagaaa-ggctccgtgattcttagtccg 270
||||||||||||| || |||||| | |||||||||| |||||| ||||| ||||||||
Sbjct: 446 atttacgctgctggccggtgctacaggcaaggtagaaaaggctccatgatttttagtccg 387
Query: 271 cagcagca---------ccggcacggaagaagctaatgaacagagacataactta--tgc 319
|||||||| ||||||| ||||||||||| ||||||| ||||||||| |||
Sbjct: 386 cagcagcagcaccgtcaccggcaccaaagaagctaataaacagaggcataacttagatgc 327
Query: 320 aaatccatcctcacctacaacaaaaagaattcccatctagcctcctcaggtatttacacg 379
||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 326 aaatccatcctcatctacaacaaaaa-atttcccatctagcctcctcaggtatttacacg 268
Query: 380 agggggcaga---tcttgattgagcctcttcaaataagagtcacggtctcgatcagcagt 436
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 agggggcagacgatcttgattgagcctcttcaaataagagtcacggtctcgatcagcagt 208
Query: 437 tgacgccacattgccccaaggcagcagctttctgtgtcggggagatgaaaggatcgatct 496
| || || |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 207 tcacaccgcattgccccaaggcggcagctttctgtgtcggggagatgaaaggatcgatct 148
Query: 497 tcacccacagcaaggagaagatagatgcaagaaggatggaccagacaatgacgattgttg 556
|||||||||||||||||||||| || || || ||||||||||||||||||||||||||||
Sbjct: 147 tcacccacagcaaggagaagatggacgcgaggaggatggaccagacaatgacgattgttg 88
Query: 557 gtgtgcggttctgccttcccatgagacccttgaggaaggggtagagatggaggatcaccc 616
|||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 87 gtgtgcggttctgcctgcccatgagacccttcaggaaggggtacagatggaggatcaccc 28
Query: 617 agatcgagaagaacagctttccaaaga 643
|||||||||||||||||||||||||||
Sbjct: 27 agatcgagaagaacagctttccaaaga 1
>gb|BI211821.1|BI211821 IP1_61_F01.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 403
Score = 672 bits (339), Expect = 0.0
Identities = 381/395 (96%)
Strand = Plus / Minus
Query: 1674 tctaccacagcagctcttaataacaatgtttggctccagatcagcttcagtcaaaacagg 1733
|||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||
Sbjct: 403 tctaccacagcagctcttaacaacaatgttaggttccagatcagcttcagtcaaaacagg 344
Query: 1734 atcgtatccatacaaagcctgtctattgaaacagcatcctgttcccacgtaaactggacc 1793
||| ||||||||||||||||| |||||||||||||||||||||||||| || ||||||||
Sbjct: 343 atcatatccatacaaagcctgcctattgaaacagcatcctgttcccacatagactggacc 284
Query: 1794 ctgaatgccatccagacctttcatgttgatatcaaagaaaactatgttccgattagcata 1853
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ctgaatgccatctagacctttcatgttgatatcaaagaaaactatgttccgattagcata 224
Query: 1854 tcgatcgtgcaagtcaatgccatcaaatctctgtggaaattgtacataacaagttttcct 1913
||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 223 tcgatcgtgcatgtcaatgccatcgaatctttgtggaaattgtacataacaagttttcct 164
Query: 1914 tcctagagccggatccatcatgaagcacattgcttctctaagagctttgctgctattgaa 1973
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 163 tcctagagccggatccatcatgaagcacattgcttctctaagagctttgctgctgttgaa 104
Query: 1974 gtaatggtcgcaatccacattgagaagataggcaccatttgtcagcacagcagatacacg 2033
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 gtaatggtcacaatccacattgagaagataggcaccatttgtcagcacagcagatacacg 44
Query: 2034 aatcagcgcattcattgcaccagccttcttgtgat 2068
|||||| ||||||||||||||||||||||||||||
Sbjct: 43 aatcagtgcattcattgcaccagccttcttgtgat 9
>gb|BG048793.1|BG048793 OV1_23_B06.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 420
Score = 668 bits (337), Expect = 0.0
Identities = 395/413 (95%), Gaps = 1/413 (0%)
Strand = Plus / Minus
Query: 867 gagatgggcagaggtgccaccaataacccaaaactgctcatttctccaccaatcttcaat 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gagatgggcagaggtgccaccaataacccaaaactgctcatttctccaccaatcttcaat 361
Query: 927 gccaacaccgctccatctaagctccaatataccagtggcaaaaatggaggcgaaaagaag 986
||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gccaacaccactccatctgagttccaatataccagtggcaaaaatggaggcgaaaagaag 301
Query: 987 aatgaagaacatcccagcataattgctaatctcaggaatgataaatttattggtaaggag 1046
||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 300 aatgaagaacatcccagcatagttactaatctcaggaatgataaatttattggtaaggag 241
Query: 1047 gcagatagcgggaagcacacaataggcaataagcggaatggatgtgattggatatacaat 1106
|||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 240 acagatagcaggaagaacacaataggcaataagcggaatggatgtgattggataaacaat 181
Query: 1107 agtgttgatgtaagccagcctctccaaaagcttcaatcgtccattgtaaccataccagat 1166
|||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 180 ggtgttgatgtaagccagcctctccaaaagcttcagtcggccattgtaaccataccagat 121
Query: 1167 aggacaatgtctactaagcagaatttccactgacccaagagcccaacggagcacctgatt 1226
|||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 120 aggacaatgtctgctgagcaaaatttccactgacccaagagcccaacggagcacctgatt 61
Query: 1227 aagacgatcggaaagattgattggtgcagaacccttgaaacaaggtcgtggtg 1279
||||||||| || ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 60 aagacgatcagagagattgattggtgcagaaccctt-aaacaaggtcgtggtg 9
>gb|BF317768.1|BF317768 OV1_9_B10.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 612
Score = 660 bits (333), Expect = 0.0
Identities = 543/605 (89%), Gaps = 21/605 (3%)
Strand = Plus / Minus
Query: 31 ttatatagttgtgctaatagattacagtgttctgactgtctgcacacattccaaagaatg 90
||||||||||||||||| | ||||||||||||||||||| ||| |||| | |||||||||
Sbjct: 601 ttatatagttgtgctaagaaattacagtgttctgactgtttgctcacaatacaaagaatg 542
Query: 91 tagtc--tttgtgtataaataacagcattgccaatataagctcgtgtgaacagttcccac 148
|| || | || ||||||||||||||||||||| |||| | ||||||||||||||||| |
Sbjct: 541 ta-tcagtctgcgtataaataacagcattgcca-tata-gttcgtgtgaacagttccctc 485
Query: 149 aaacaaatgataatttactctaaaacaataaactgcacgcataacaaaacttcaaaattc 208
||||||||||||||||||||||||||||||||| |||| |||| |||| | ||||||||
Sbjct: 484 aaacaaatgataatttactctaaaacaataaacaccacgtataaaaaaaatgcaaaattc 425
Query: 209 acatcttacgctgctggctggcgctacatggaaggtagaaa-ggctccgtgattcttagt 267
||| ||||||||||||| || |||||| | |||||||||| |||||| ||||| |||||
Sbjct: 424 acaatttacgctgctggccggtgctacaggcaaggtagaaaaggctccatgatttttagt 365
Query: 268 ccgcagcagca---------ccggcacggaagaagctaatgaacagagacataactta-- 316
||||||||||| ||||||| ||||||||||| ||||||| |||||||||
Sbjct: 364 ccgcagcagcagcaccgtcaccggcaccaaagaagctaataaacagaggcataacttaga 305
Query: 317 tgcaaatccatcctcacctacaacaaaaagaattcccatctagcctcctcaggtatttac 376
|||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 304 tgcaaatccatcctcatctacaacaaaaa-atttcccatctagcctcctcaggtatttac 246
Query: 377 acgagggggcaga---tcttgattgagcctcttcaaataagagtcacggtctcgatcagc 433
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 acgagggggcagacgatcttgattgagcctcttcaaataagagtcacggtctcgatcagc 186
Query: 434 agttgacgccacattgccccaaggcagcagctttctgtgtcggggagatgaaaggatcga 493
|||| || || |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 185 agttcacaccgcattgccccaaggcggcagctttctgtgtcggggagatgaaaggatcga 126
Query: 494 tcttcacccacagcaaggagaagatagatgcaagaaggatggaccagacaatgacgattg 553
||||||||||||||||||||||||| || || || |||||||||||||||||||||||||
Sbjct: 125 tcttcacccacagcaaggagaagatggacgcgaggaggatggaccagacaatgacgattg 66
Query: 554 ttggtgtgcggttctgccttcccatgagacccttgaggaaggggtagagatggaggatca 613
||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||
Sbjct: 65 ttggtgtgcggttctgcctgcccatgagacccttcaggaaggggtacagatggaggatca 6
Query: 614 cccag 618
|||||
Sbjct: 5 cccag 1
>gb|BG947780.1|BG947780 IP1_5_A08.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 385
Score = 646 bits (326), Expect = 0.0
Identities = 365/378 (96%)
Strand = Plus / Minus
Query: 1569 aataccctcttcgatgtcttccatattgaagatgggagctgaagattctgttctcttcat 1628
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 385 aataccctcttcgatgtcttccatgttgaagatgggagctgaagattctgttctcttcat 326
Query: 1629 aatacggctttgactatccatataactcttgttctttttcttccttctaccacagcagct 1688
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 325 aatacggctttgactatccatataacttttgttctttttcttccttctaccacagcagct 266
Query: 1689 cttaataacaatgtttggctccagatcagcttcagtcaaaacaggatcgtatccatacaa 1748
||||| ||||||||| || ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 265 cttaacaacaatgttaggttccagatcagcttcagtcaaaacaggatcatatccatacaa 206
Query: 1749 agcctgtctattgaaacagcatcctgttcccacgtaaactggaccctgaatgccatccag 1808
|||||| |||||||||||||||||||||||||| || |||||||||||||||||||| ||
Sbjct: 205 agcctgcctattgaaacagcatcctgttcccacatagactggaccctgaatgccatctag 146
Query: 1809 acctttcatgttgatatcaaagaaaactatgttccgattagcatatcgatcgtgcaagtc 1868
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 145 acctttcatgttgatatcaaagaaaactatgttccgattagcatatcgatcgtgcatgtc 86
Query: 1869 aatgccatcaaatctctgtggaaattgtacataacaagttttccttcctagagccggatc 1928
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 aatgccatcgaatctttgtggaaattgtacataacaagttttccttcctagagccggatc 26
Query: 1929 catcatgaagcacattgc 1946
||||||||||||||||||
Sbjct: 25 catcatgaagcacattgc 8
>gb|BE355115.1|BE355115 DG1_113_C09.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 612
Score = 638 bits (322), Expect = 0.0
Identities = 546/610 (89%), Gaps = 23/610 (3%)
Strand = Plus / Minus
Query: 34 tatagttgtgctaatagattacagtgttctgactgtctgcacacattccaaagaatgtag 93
|||||||||||||| | ||||||||||||||||||| ||| |||| | |||||||||||
Sbjct: 605 tatagttgtgctaaaa-attacagtgttctgactgtttgctcacaatacaaagaatgta- 548
Query: 94 tc--tttgtgtataaataacagcattgccaatataagctcgtgtgaacagttcccacaaa 151
|| | || ||||||||||||||||||||| |||| | ||||||||||||||||| ||||
Sbjct: 547 tcagtctgcgtataaataacagcattgcca-tata-gttcgtgtgaacagttccctcaaa 490
Query: 152 caaatgataatttactctaaaacaataaactgcacgcataacaaaactt-caaaattcac 210
|||||||||||||||||||||||||||||| |||| |||| |||| | ||||||||||
Sbjct: 489 caaatgataatttactctaaaacaataaacaccacgtataaaaaaaaatgcaaaattcac 430
Query: 211 atcttacgctgctggctggcgctacatggaaggtagaaa-ggctccgtgattcttagtcc 269
| ||||||||||||| || |||||| | |||||||||| |||||| ||||| |||||||
Sbjct: 429 aatttacgctgctggccggtgctacaggcaaggtagaaaaggctccatgatttttagtcc 370
Query: 270 gcagcagca---------ccggcacggaagaagctaatgaacagagacataactta--tg 318
||||||||| ||||||| ||||||||||| ||||||| ||||||||| ||
Sbjct: 369 gcagcagcagcaccgtcaccggcaccaaagaagctaataaacagaggcataacttagatg 310
Query: 319 caaatccatcctcacctacaacaaaaagaattcccatctagcctcctcaggtatttacac 378
|||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 309 caaatccatcctcatctacaacaaaaa-atttcccatctagcctcctcaggtatttacac 251
Query: 379 gagggggcaga---tcttgattgagcctcttcaaataagagtcacggtctcgatcagcag 435
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gagggggcagacgatcttgattgagcctcttcaaataagagtcacggtctcgatcagcag 191
Query: 436 ttgacgccacattgccccaaggcagcagctttctgtgtcggggagatgaaaggatcgatc 495
|| || || |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 190 ttcacaccgcattgccccaaggcggcagctttctgtgtcggggagatgaaaggatcgatc 131
Query: 496 ttcacccacagcaaggagaagatagatgcaagaaggatggaccagacaatgacgattgtt 555
||||||||||||||||||||||| || || || |||||||||||||||||||||||||||
Sbjct: 130 ttcacccacagcaaggagaagatggacgcgaggaggatggaccagacaatgacgattgtt 71
Query: 556 ggtgtgcggttctgccttcccatgagacccttgaggaaggggtagagatggaggatcacc 615
||||||||||||||||| |||||||||| ||| ||||||||||| |||||||||||||||
Sbjct: 70 ggtgtgcggttctgcctgcccatgagacacttcaggaaggggtacagatggaggatcacc 11
Query: 616 cagatcgaga 625
||||||||||
Sbjct: 10 cagatcgaga 1
>gb|CD227257.1|CD227257 CCC1_50_D12.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_50_D12_A007 3', mRNA sequence
Length = 611
Score = 634 bits (320), Expect = e-179
Identities = 549/614 (89%), Gaps = 26/614 (4%)
Strand = Plus / Minus
Query: 18 tacaacagctgcctt---atatagttgtgctaatagattacagtgttctgactgtctgca 74
||||||||||||||| ||||||||||||||| | || |||||||||||||||| |||
Sbjct: 608 tacaacagctgcctttttatatagttgtgctaagaaat-acagtgttctgactgtttgct 550
Query: 75 cacattccaaagaatgtagtc--tttgtgtataaataacagcattgccaatataagctcg 132
|||| | ||||||||||| || | || ||||||||||||||||||||| |||| | |||
Sbjct: 549 cacaatacaaagaatgta-tcagtctgcgtataaataacagcattgcca-tata-gttcg 493
Query: 133 tgtgaacagttcccacaaacaaatgataatttactctaaaacaataaactgcacgcataa 192
|||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 492 tgtgaacagttccctcaaacaaatgataatttactctaaaacaataaacaccacgtataa 433
Query: 193 caaaacttcaaaattcacatcttacgctgctggctggcgctacatggaaggtagaaa-gg 251
|||| | ||||||||||| ||||||||||||| || |||||| | |||||||||| ||
Sbjct: 432 aaaaa-tgcaaaattcacaatttacgctgctggccggtgctacaggcaaggtagaaaagg 374
Query: 252 ctccgtgattcttagtccgcagcagca---------ccggcacggaagaagctaatgaac 302
|||| ||||| |||||||||||||||| ||||||| |||||||||||| |||
Sbjct: 373 ctccatgatttttagtccgcagcagcagcaccgtcaccggcaccgaagaagctaataaac 314
Query: 303 agagacataactta--tgcaaatccatcctcacctacaacaaaaagaattcccatctagc 360
|||| ||||||||| |||||||||||||||| |||||||||||| | ||||||||||||
Sbjct: 313 agaggcataacttagatgcaaatccatcctcatctacaacaaaaa-atttcccatctagc 255
Query: 361 ctcctcaggtatttacacgagggggcaga---tcttgattgagcctcttcaaataagagt 417
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 254 ctcctcaggtatttacacgagggggcagacgatcttgattgagcctcttcaaataagagt 195
Query: 418 cacggtctcgatcagcagttgacgccacattgccccaaggcagcagctttctgtgtcggg 477
|||||||||||||||||||| || || |||||||||||||| ||||||||||||||||||
Sbjct: 194 cacggtctcgatcagcagttcacaccgcattgccccaaggcggcagctttctgtgtcggg 135
Query: 478 gagatgaaaggatcgatcttcacccacagcaaggagaagatagatgcaagaaggatggac 537
||||||||||||||||||||||||||||||||||||||||| || || || |||||||||
Sbjct: 134 gagatgaaaggatcgatcttcacccacagcaaggagaagatggacgcgaggaggatggac 75
Query: 538 cagacaatgacgattgttggtgtgcggttctgccttcccatgagacccttgaggaagggg 597
||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 74 cagacaatgacgattgttggtgtgcggttctgcctgcccatgagacccttcaggaagggg 15
Query: 598 tagagatggaggat 611
|| |||||||||||
Sbjct: 14 tacagatggaggat 1
>gb|BI074880.1|BI074880 IP1_17_A09.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 523
Score = 624 bits (315), Expect = e-176
Identities = 474/524 (90%), Gaps = 16/524 (3%)
Strand = Plus / Minus
Query: 168 ctaaaacaataaactgcacgcataacaaaacttcaaaattcacatcttacgctgctggct 227
|||||||||||||| |||| |||| |||| | ||||||||||| |||||||||||||
Sbjct: 523 ctaaaacaataaacaccacgtataaaaaaaatgcaaaattcacaatttacgctgctggcc 464
Query: 228 ggcgctacatggaaggtagaaa-ggctccgtgattcttagtccgcagcagca-------- 278
|| |||||| | |||||||||| |||||| ||||| ||||||||||||||||
Sbjct: 463 ggtgctacaggcaaggtagaaaaggctccatgatttttagtccgcagcagcagcaccgtc 404
Query: 279 -ccggcacggaagaagctaatgaacagagacataactta--tgcaaatccatcctcacct 335
||||||| ||||||||||| ||||||| ||||||||| |||||||||||||||| ||
Sbjct: 403 accggcaccaaagaagctaataaacagaggcataacttagatgcaaatccatcctcatct 344
Query: 336 acaacaaaaagaattcccatctagcctcctcaggtatttacacgagggggcaga---tct 392
|||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 343 acaacaaaaa-atttcccatctagcctcctcaggtatttacacgagggggcagacgatct 285
Query: 393 tgattgagcctcttcaaataagagtcacggtctcgatcagcagttgacgccacattgccc 452
||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||
Sbjct: 284 tgattgagcctcttcaaataagagtcacggtctcgatcagcagttcacaccgcattgccc 225
Query: 453 caaggcagcagctttctgtgtcggggagatgaaaggatcgatcttcacccacagcaagga 512
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 caaggcggcagctttctgtgtcggggagatgaaaggatcgatcttcacccacagcaagga 165
Query: 513 gaagatagatgcaagaaggatggaccagacaatgacgattgttggtgtgcggttctgcct 572
|||||| || || || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 gaagatggacgcgaggaggatggaccagacaatgacgattgttggtgtgcggttctgcct 105
Query: 573 tcccatgagacccttgaggaaggggtagagatggaggatcacccagatcgagaagaacag 632
|||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 104 gcccatgagacccttcaggaaggggtacagatggaggatcacccagatcgagaagaacag 45
Query: 633 ctttccaaagagcggaccccaggattggtagccactgttaatgg 676
|||||||||||||||||||||||||||||| || ||||| ||||
Sbjct: 44 ctttccaaagagcggaccccaggattggtaaccgctgttgatgg 1
>gb|BI643725.1|BI643725 IP1_56_C04.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 374
Score = 624 bits (315), Expect = e-176
Identities = 354/367 (96%)
Strand = Plus / Minus
Query: 1674 tctaccacagcagctcttaataacaatgtttggctccagatcagcttcagtcaaaacagg 1733
|||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||
Sbjct: 374 tctaccacagcagctcttaacaacaatgttaggttccagatcagcttcagtcaaaacagg 315
Query: 1734 atcgtatccatacaaagcctgtctattgaaacagcatcctgttcccacgtaaactggacc 1793
||| ||||||||||||||||| |||||||||||||||||||||||||| || ||||||||
Sbjct: 314 atcatatccatacaaagcctgcctattgaaacagcatcctgttcccacatagactggacc 255
Query: 1794 ctgaatgccatccagacctttcatgttgatatcaaagaaaactatgttccgattagcata 1853
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ctgaatgccatctagacctttcatgttgatatcaaagaaaactatgttccgattagcata 195
Query: 1854 tcgatcgtgcaagtcaatgccatcaaatctctgtggaaattgtacataacaagttttcct 1913
||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 194 tcgatcgtgcatgtcaatgccatcgaatctttgtggaaattgtacataacaagttttcct 135
Query: 1914 tcctagagccggatccatcatgaagcacattgcttctctaagagctttgctgctattgaa 1973
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 134 tcctagagccggatccatcatgaagcacattgcttctctaagagctttgctgctgttgaa 75
Query: 1974 gtaatggtcgcaatccacattgagaagataggcaccatttgtcagcacagcagatacacg 2033
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 gtaatggtcacaatccacattgagaagataggcaccatttgtcagcacagcagatacacg 15
Query: 2034 aatcagc 2040
|||||||
Sbjct: 14 aatcagc 8
>gb|BI141671.1|BI141671 IP1_55_E02.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 367
Score = 611 bits (308), Expect = e-172
Identities = 347/360 (96%)
Strand = Plus / Minus
Query: 1587 ttccatattgaagatgggagctgaagattctgttctcttcataatacggctttgactatc 1646
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ttccatgttgaagatgggagctgaagattctgttctcttcataatacggctttgactatc 308
Query: 1647 catataactcttgttctttttcttccttctaccacagcagctcttaataacaatgtttgg 1706
||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 307 catataacttttgttctttttcttccttctaccacagcagctcttaacaacaatgttagg 248
Query: 1707 ctccagatcagcttcagtcaaaacaggatcgtatccatacaaagcctgtctattgaaaca 1766
||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 247 ttccagatcagcttcagtcaaaacaggatcatatccatacaaagcctgcctattgaaaca 188
Query: 1767 gcatcctgttcccacgtaaactggaccctgaatgccatccagacctttcatgttgatatc 1826
||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 187 gcatcctgttcccacatagactggaccctgaatgccatctagacctttcatgttgatatc 128
Query: 1827 aaagaaaactatgttccgattagcatatcgatcgtgcaagtcaatgccatcaaatctctg 1886
|||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||
Sbjct: 127 aaagaaaactatgttccgattagcatatcgatcgtgcatgtcaatgccatcgaatctttg 68
Query: 1887 tggaaattgtacataacaagttttccttcctagagccggatccatcatgaagcacattgc 1946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 tggaaattgtacataacaagttttccttcctagagccggatccatcatgaagcacattgc 8
>gb|CN129247.1|CN129247 RHOH1_34_G09.b3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_34_G09_A002 3', mRNA sequence
Length = 774
Score = 605 bits (305), Expect = e-170
Identities = 329/337 (97%)
Strand = Plus / Minus
Query: 635 ttccaaagagcggaccccaggattggtagccactgttaatggcatacgaaattcctgcca 694
|||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||
Sbjct: 337 ttccaaagagcggaccccaggattggtaaccgctgttgatggcatacgaaattcctgcca 278
Query: 695 ccattccgaccaggttaatgacaagaacagtggtcggaggaatgagcaaactggtccact 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 ccattccgaccaggttaatgacaagaacagtggtcggaggaatgagcaaactggtccact 218
Query: 755 tgaacacatatagctcagcaaagtcgccatcctcatcagatgcctttgaggtaactgtga 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 tgaacacatatagctcagcaaagtcgccatcctcatcagatgcctttgaggtaactgtga 158
Query: 815 agttggtatcaatcccagccaacactttcagcagaccctggaacactgcgaagagatggg 874
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 157 agttggtatcaatcccagccaacactttcagcagaccctggaacaccgtgaagagatggg 98
Query: 875 cagaggtgccaccaataacccaaaactgctcatttctccaccaatcttcaatgccaacac 934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 cagaggtgccaccaataacccaaaactgctcatttctccaccaatcttcaatgccaacac 38
Query: 935 cgctccatctaagctccaatataccagtggcaaaaat 971
| |||||||| || |||||||||||||||||||||||
Sbjct: 37 cactccatctgagttccaatataccagtggcaaaaat 1
Score = 392 bits (198), Expect = e-107
Identities = 386/440 (87%), Gaps = 24/440 (5%)
Strand = Plus / Minus
Query: 18 tacaacagctgcctt---atatagttgtgctaatagattacagtgttctgactgtctgca 74
||||||||||||||| ||||||||||||||| | ||||||||||||||||||| |||
Sbjct: 771 tacaacagctgcctttttatatagttgtgctaagaaattacagtgttctgactgtttgct 712
Query: 75 cacattccaaagaatgtagtc--tttgtgtataaataacagcattgccaatataagctcg 132
|||| | ||||||||||| || | || ||||||||||||||||||||| |||| | |||
Sbjct: 711 cacaatacaaagaatgta-tcagtctgcgtataaataacagcattgcca-tata-gttcg 655
Query: 133 tgtgaacagttcccacaaacaaatgataatttactctaaaacaataaactgcacgcataa 192
|||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 654 tgtgaacagttccctcaaacaaatgataatttactctaaaacaataaacaccacgtataa 595
Query: 193 caaaacttcaaaattcacatcttacgctgctggctggcgctacatggaaggtagaaa-gg 251
|||| | ||||||||||| ||||||||||||| || |||||| | |||||||||| ||
Sbjct: 594 aaaaaatgcaaaattcacaatttacgctgctggccggtgctacaggcaaggtagaaaagg 535
Query: 252 ctccgtgattcttagtccgcagcagca---------ccggcacggaagaagctaatgaac 302
|||| ||||| |||||||||||||||| ||||||| ||||||||||| |||
Sbjct: 534 ctccatgatttttagtccgcagcagcagcaccgtcaccggcaccaaagaagctaataaac 475
Query: 303 agagacataactta--tgcaaatccatcctcacctacaacaaaaagaattcccatctagc 360
|||| ||||||||| |||||||||||||||| |||||||||||| | ||||||||||||
Sbjct: 474 agaggcataacttagatgcaaatccatcctcatctacaacaaaaa-atttcccatctagc 416
Query: 361 ctcctcaggtatttacacgagggggcaga---tcttgattgagcctcttcaaataagagt 417
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 415 ctcctcaggtatttacacgagggggcagacgatcttgattgagcctcttcaaataagagt 356
Query: 418 cacggtctcgatcagcagtt 437
||||||||||||||||||||
Sbjct: 355 cacggtctcgatcagcagtt 336
>gb|BG050771.1|BG050771 FM1_70_D01.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 359
Score = 593 bits (299), Expect = e-167
Identities = 338/351 (96%)
Strand = Plus / Minus
Query: 1268 aaggtcgtggtggcatgcagtagattgattgccagccccttgcatgcattttaaacccag 1327
||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 359 aaggtcggggtggcatgcagtagattgattgccatcctcttgcatgcattttaaacccag 300
Query: 1328 tcagaatatcctccgttactgaaccatagatccagccaatctcttttccccattcagttt 1387
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tcagaatatcctctgtaactgaaccatagatccagccaatctcttttccccattcagttt 240
Query: 1388 tgtcctcatatccacaactgatgacatggatagcttcctttagtagagaagctgggtttg 1447
|||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 239 tgtcctcatacccacagctgattacatggatagcttcctttagtagagaagctgggtttg 180
Query: 1448 ttgaaggtggtatgccaccttgtgtcataaaggtggatgcaatgaaaataggagactgac 1507
|||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 179 ttgaaggtggtatgccactttgagtcataaaggtggatgcaatgaaaattggagactgac 120
Query: 1508 caaagcgtttctccaatttcctctgggacataagcactgacctttcatcctcgtaacctt 1567
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 119 caaagcgtttctccaatttcctctgggacataagcactgacctttcatcctcataacctt 60
Query: 1568 caataccctcttcgatgtcttccatattgaagatgggagctgaagattctg 1618
||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 59 caataccctcttcgatgtcttccatgttgaagatgggagctgaagattctg 9
>gb|BI141589.1|BI141589 IP1_54_D04.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 351
Score = 587 bits (296), Expect = e-165
Identities = 332/344 (96%)
Strand = Plus / Minus
Query: 1697 caatgtttggctccagatcagcttcagtcaaaacaggatcgtatccatacaaagcctgtc 1756
||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 351 caatgttaggttccagatcagcttcagtcaaaacaggatcatatccatacaaagcctgcc 292
Query: 1757 tattgaaacagcatcctgttcccacgtaaactggaccctgaatgccatccagacctttca 1816
||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||
Sbjct: 291 tattgaaacagcatcctgttcccacatagactggaccctgaatgccatctagacctttca 232
Query: 1817 tgttgatatcaaagaaaactatgttccgattagcatatcgatcgtgcaagtcaatgccat 1876
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 231 tgttgatatcaaagaaaactatgttccgattagcatatcgatcgtgcatgtcaatgccat 172
Query: 1877 caaatctctgtggaaattgtacataacaagttttccttcctagagccggatccatcatga 1936
| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 cgaatctttgtggaaattgtacataacaagttttccttcctagagccggatccatcatga 112
Query: 1937 agcacattgcttctctaagagctttgctgctattgaagtaatggtcgcaatccacattga 1996
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 111 agcacattgcttctctaagagctttgctgctgttgaagtaatggtcacaatccacattga 52
Query: 1997 gaagataggcaccatttgtcagcacagcagatacacgaatcagc 2040
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51 gaagataggcaccatttgtcagcacagcagatacacgaatcagc 8
>gb|CF072531.1|CF072531 FE1_3_B12.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_3_B12_A002 3', mRNA sequence
Length = 577
Score = 587 bits (296), Expect = e-165
Identities = 518/582 (89%), Gaps = 25/582 (4%)
Strand = Plus / Minus
Query: 18 tacaacagctgcctt---atatagttgtgctaatagattacagtgttctgactgtctgca 74
||||||||||||||| ||||||||||||||| | ||||||||||||||||||| |||
Sbjct: 577 tacaacagctgcctttttatatagttgtgctaaga-attacagtgttctgactgtttgct 519
Query: 75 cacattccaaagaatgtagtc--tttgtgtataaataacagcattgccaatataagctcg 132
|||| | ||||||||||| || | || ||||||||||||||||||||| |||| | |||
Sbjct: 518 cacaatacaaagaatgta-tcagtctgcgtataaataacagcattgcca-tata-gttcg 462
Query: 133 tgtgaacagttcccacaaacaaatgataatttactctaaaacaataaactgcacgcataa 192
|||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 461 tgtgaacagttccctcaaacaaatgataatttactctaaaacaataaacaccacgtataa 402
Query: 193 caaaacttcaaaattcacatcttacgctgctggctggcgctacatggaaggtagaaa-gg 251
|||| | ||||||||||| ||||||||||||| || |||||| | | |||||||| ||
Sbjct: 401 aaaaaatgcaaaattcacaatttacgctgctggccggtgctacaggcagggtagaaaagg 342
Query: 252 ctccgtgattcttagtccgcagcagca---------ccggcacggaagaagctaatgaac 302
|||| ||||| |||||||||||||||| ||||||| ||||||||||| |||
Sbjct: 341 ctccatgatttttagtccgcagcagcagcaccgtcaccggcaccaaagaagctaataaac 282
Query: 303 agagacataactta--tgcaaatccatcctcacctacaacaaaaagaattcccatctagc 360
|||| ||||||||| |||||||||||||||| |||||||||||| | ||||||||||||
Sbjct: 281 agaggcataacttagatgcaaatccatcctcatctacaacaaaaa-atttcccatctagc 223
Query: 361 ctcctcaggtatttacacgagggggcaga---tcttgattgagcctcttcaaataagagt 417
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 222 ctcctcaggtatttacacgagggggcagacgatcttgattgagcctcttcaaataagagt 163
Query: 418 cacggtctcgatcagcagttgacgccacattgccccaaggcagcagctttctgtgtcggg 477
|||||||||||||||||||| || || |||||||||||||| ||||||||||||||||||
Sbjct: 162 cacggtctcgatcagcagttcacaccgcattgccccaaggcggcagctttctgtgtcggg 103
Query: 478 gagatgaaaggatcgatcttcacccacagcaaggagaagatagatgcaagaaggatggac 537
||||||||||||||||||||||||||||||||||||||||| || || || |||||||||
Sbjct: 102 gagatgaaaggatcgatcttcacccacagcaaggagaagatggacgcgaggaggatggac 43
Query: 538 cagacaatgacgattgttggtgtgcggttctgccttcccatg 579
||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 42 cagacaatgacgattgttggtgtgcggttctgcctgcccatg 1
>gb|CW482521.1|CW482521 fsbb001f242k13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f242k13, DNA
sequence
Length = 647
Score = 575 bits (290), Expect = e-161
Identities = 341/358 (95%)
Strand = Plus / Plus
Query: 1012 ctaatctcaggaatgataaatttattggtaaggaggcagatagcgggaagcacacaatag 1071
|||| |||||||||||||||||||||||||||||| |||||||| ||||| |||||||||
Sbjct: 137 ctaacctcaggaatgataaatttattggtaaggagacagatagcaggaagaacacaatag 196
Query: 1072 gcaataagcggaatggatgtgattggatatacaatagtgttgatgtaagccagcctctcc 1131
||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 197 gcaataagcggaatggatgtgattggataaacaatggtgttgatgtaagccagcctctcc 256
Query: 1132 aaaagcttcaatcgtccattgtaaccataccagataggacaatgtctactaagcagaatt 1191
|||||||||| ||| |||||||||||||||||||||||||||||||| || |||| ||||
Sbjct: 257 aaaagcttcagtcggccattgtaaccataccagataggacaatgtctgctgagcaaaatt 316
Query: 1192 tccactgacccaagagcccaacggagcacctgattaagacgatcggaaagattgattggt 1251
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 317 tccactgacccaagagcccaacggagcacctgattaagacgatcagagagattgattggt 376
Query: 1252 gcagaacccttgaaacaaggtcgtggtggcatgcagtagattgattgccagccccttgca 1311
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 377 gcagaacccttgaaacaaggtcgtggtggcatgcagtagattgattgccatcctcttgca 436
Query: 1312 tgcattttaaacccagtcagaatatcctccgttactgaaccatagatccagccaatct 1369
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 437 tgcattttaaacccagtcagaatatcctctgtaactgaaccatagatccagccaatct 494
Score = 95.6 bits (48), Expect = 3e-017
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 1368 ctcttttccccattcagttttgtcctcatatccacaactgatgacatggatagcttcctt 1427
|||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||
Sbjct: 588 ctcttttccccattcagttttgtcctcatacccacagctgattacatggatagcttcctt 647
>gb|CD227780.1|CD227780 CCC1_53_B11.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_53_B11_A007 5', mRNA sequence
Length = 652
Score = 563 bits (284), Expect = e-158
Identities = 560/652 (85%)
Strand = Plus / Minus
Query: 1396 tatccacaactgatgacatggatagcttcctttagtagagaagctgggtttgttgaaggt 1455
||||||||||| |||||||| |||||||||||||| || ||||||||||||||||||||
Sbjct: 652 tatccacaactaatgacatgtatagcttcctttagcagggaagctgggtttgttgaaggg 593
Query: 1456 ggtatgccaccttgtgtcataaaggtggatgcaatgaaaataggagactgaccaaagcgt 1515
|||||||||||||| |||||||||||||||||||| ||||| || ||||| |||||||||
Sbjct: 592 ggtatgccaccttgagtcataaaggtggatgcaataaaaattggggactggccaaagcgt 533
Query: 1516 ttctccaatttcctctgggacataagcactgacctttcatcctcgtaaccttcaataccc 1575
|||||||| || |||||||||| |||| |||||||||||||||||||||||||| |||
Sbjct: 532 ttctccaagctcttctgggacatgagcagtgacctttcatcctcgtaaccttcaaatccc 473
Query: 1576 tcttcgatgtcttccatattgaagatgggagctgaagattctgttctcttcataatacgg 1635
||||| || |||||||| |||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 472 tcttctatatcttccatgttgaagatgggagccgaagattctgttctcttcatatcacgg 413
Query: 1636 ctttgactatccatataactcttgttctttttcttccttctaccacagcagctcttaata 1695
||| ||| ||||| ||||||| ||| | || || | |||||||| || |||||
Sbjct: 412 tttttggaatcaatatagctcttgtccttcctttttctgccgccacagcaacttttaatg 353
Query: 1696 acaatgtttggctccagatcagcttcagtcaaaacaggatcgtatccatacaaagcctgt 1755
| |||| | ||||||| ||||||||| ||||| |||||||| || |||||||| |||||
Sbjct: 352 ataatgataggctccaaatcagcttctgtcaatacaggatcataaccatacaaggcctgc 293
Query: 1756 ctattgaaacagcatcctgttcccacgtaaactggaccctgaatgccatccagacctttc 1815
|||||||||||||||||||||||||| ||||| || || ||||||||||| | ||| |||
Sbjct: 292 ctattgaaacagcatcctgttcccacataaacaggtccttgaatgccatctaaacccttc 233
Query: 1816 atgttgatatcaaagaaaactatgttccgattagcatatcgatcgtgcaagtcaatgcca 1875
|| || ||||||||||| || |||||||| || ||||| ||||| || |||| ||||||
Sbjct: 232 atattaatatcaaagaagacaatgttccggtttgcataacgatcatgtgagtctatgcca 173
Query: 1876 tcaaatctctgtggaaattgtacataacaagttttccttcctagagccggatccatcatg 1935
|||||||| |||||||| || || || ||||||||||||||||| || |||||||||||
Sbjct: 172 tcaaatctttgtggaaactgaacgtagcaagttttccttcctagtgctggatccatcata 113
Query: 1936 aagcacattgcttctctaagagctttgctgctattgaagtaatggtcgcaatccacattg 1995
|| ||||| || |||||||||||||||||||| |||||||| || || |||||||||||
Sbjct: 112 aaacacatagcctctctaagagctttgctgctgttgaagtagtgatcacaatccacatta 53
Query: 1996 agaagataggcaccatttgtcagcacagcagatacacgaatcagcgcattca 2047
|||||||| |||||||||||||| ||||| ||||| || |||| |||||||
Sbjct: 52 agaagataagcaccatttgtcaggacagctgatacgcgtatcaaagcattca 1
>gb|CF073545.1|CF073545 FE1_10_F02.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_10_F02_A002 5', mRNA sequence
Length = 490
Score = 543 bits (274), Expect = e-152
Identities = 439/491 (89%), Gaps = 16/491 (3%)
Strand = Plus / Plus
Query: 141 gttcccacaaacaaatgataatttactctaaaacaataaactgcacgcataacaaaactt 200
|||||| |||||||||||||||||||||||||||||||||| |||| |||| |||| |
Sbjct: 1 gttccctcaaacaaatgataatttactctaaaacaataaacaccacgtataaaaaaaatg 60
Query: 201 caaaattcacatcttacgctgctggctggcgctacatggaaggtagaaa-ggctccgtga 259
||||||||||| ||||||||||||| || |||||| | |||||| ||| |||||| |||
Sbjct: 61 caaaattcacaatttacgctgctggccggtgctacaggcaaggtaaaaaaggctccatga 120
Query: 260 ttcttagtccgcagcagca---------ccggcacggaagaagctaatgaacagagacat 310
|| |||||||||||||||| ||||||| ||||||||||| ||||||| |||
Sbjct: 121 tttttagtccgcagcagcagcaccgtcaccggcaccaaagaagctaataaacagaggcat 180
Query: 311 aactta--tgcaaatccatcctcacctacaacaaaaagaattcccatctagcctcctcag 368
|||||| |||||||||||||||| |||||||||||| | ||||||||||||||||||||
Sbjct: 181 aacttagatgcaaatccatcctcatctacaacaaaaa-atttcccatctagcctcctcag 239
Query: 369 gtatttacacgagggggcaga---tcttgattgagcctcttcaaataagagtcacggtct 425
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 240 gtatttacacgagggggcagacgatcttgattgagcctcttcaaataagagtcacggtct 299
Query: 426 cgatcagcagttgacgccacattgccccaaggcagcagctttctgtgtcggggagatgaa 485
|||||||||||| || || |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 300 cgatcagcagttcacaccgcattgccccaaggcggcagctttctgtgtcggggagatgaa 359
Query: 486 aggatcgatcttcacccacagcaaggagaagatagatgcaagaaggatggaccagacaat 545
||||||||||||||||||||||||||| ||||| || || || ||||||||||| |||||
Sbjct: 360 aggatcgatcttcacccacagcaaggaaaagatggacgcgaggaggatggaccacacaat 419
Query: 546 gacgattgttggtgtgcggttctgccttcccatgagacccttgaggaaggggtagagatg 605
||||||||||||||||||||||||||| ||||||| |||||| ||||||||||| |||||
Sbjct: 420 gacgattgttggtgtgcggttctgcctgcccatgaaacccttcaggaaggggtacagatg 479
Query: 606 gaggatcaccc 616
|||||||||||
Sbjct: 480 gaggatcaccc 490
>gb|BI211854.1|BI211854 IP1_62_B12.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 503
Score = 498 bits (251), Expect = e-138
Identities = 440/495 (88%), Gaps = 21/495 (4%)
Strand = Plus / Minus
Query: 31 ttatatagttgtgctaatagattacagtgttctgactgtctgcacacattccaaagaatg 90
||||||||||||||||| | ||||||||||||||||||| ||| |||| | |||||||||
Sbjct: 491 ttatatagttgtgctaagaaattacagtgttctgactgtttgctcacaatacaaagaatg 432
Query: 91 tagtc--tttgtgtataaataacagcattgccaatataagctcgtgtgaacagttcccac 148
|| || | || ||||||||||||||||||||| |||| | ||||||||||||||||| |
Sbjct: 431 ta-tcagtctgcgtataaataacagcattgcca-tata-gttcgtgtgaacagttccctc 375
Query: 149 aaacaaatgataatttactctaaaacaataaactgcacgcataacaaaacttcaaaattc 208
||||||||||||||||||||||||||||||||| |||| |||| |||| | ||||||||
Sbjct: 374 aaacaaatgataatttactctaaaacaataaacaccacgtataaaaaaaatgcaaaattc 315
Query: 209 acatcttacgctgctggctggcgctacatggaaggtagaaa-ggctccgtgattcttagt 267
||| ||||||||||||| || |||||| | |||||||||| |||||| ||||| |||||
Sbjct: 314 acaatttacgctgctggccggtgctacaggcaaggtagaaaaggctccatgatttttagt 255
Query: 268 ccgcagcagca---------ccggcacggaagaagctaatgaacagagacataactta-- 316
||||||||||| ||||||| ||||||||||| ||||||| |||||||||
Sbjct: 254 ccgcagcagcagcaccgtcaccggcaccaaagaagctaataaacagaggcataacttaga 195
Query: 317 tgcaaatccatcctcacctacaacaaaaagaattcccatctagcctcctcaggtatttac 376
|||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 194 tgcaaatccatcctcatctacaacaaaaa-atttcccatctagcctcctcaggtatttac 136
Query: 377 acgagggggcaga---tcttgattgagcctcttcaaataagagtcacggtctcgatcagc 433
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 acgagggggcagacgatcttgattgagcctcttcaaataagagtcacggtctcgatcagc 76
Query: 434 agttgacgccacattgccccaaggcagcagctttctgtgtcggggagatgaaaggatcga 493
|||| || || |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 75 agttcacaccgcattgccccaaggcggcagctttctgtgtcggggagatgaaaggatcga 16
Query: 494 tcttcacccacagca 508
|||||||||||||||
Sbjct: 15 tcttcacccacagca 1
>gb|CF073760.1|CF073760 FE1_12_E05.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_12_E05_A002 3', mRNA sequence
Length = 477
Score = 484 bits (244), Expect = e-134
Identities = 405/453 (89%), Gaps = 18/453 (3%)
Strand = Plus / Minus
Query: 101 gtataaataacagcattgccaatataagctcgtgtgaacagttcccacaaacaaatgata 160
||||||||||||||||||||| |||| | ||||||||||||||||| |||||||||||||
Sbjct: 450 gtataaataacagcattgcca-tata-gttcgtgtgaacagttccctcaaacaaatgata 393
Query: 161 atttactctaaaacaataaactgcacgcataacaaaacttcaaaattcacatcttacgct 220
||||||||||||||||||||| |||| |||| |||| | ||||||||||| |||||||
Sbjct: 392 atttactctaaaacaataaacaccacgtataaaaaaaatgcaaaattcacaatttacgct 333
Query: 221 gctggctggcgctacatggaaggtagaaa-ggctccgtgattcttagtccgcagcagca- 278
|||||| || |||||| | |||||||||| |||||| ||||| ||||||||||||||||
Sbjct: 332 gctggccggtgctacaggcaaggtagaaaaggctccatgatttttagtccgcagcagcag 273
Query: 279 --------ccggcacggaagaagctaatgaacagagacataactta--tgcaaatccatc 328
||||||| ||||||||||| ||||||| ||||||||| ||||||||||||
Sbjct: 272 caccgtcaccggcaccaaagaagctaataaacagaggcataacttagatgcaaatccatc 213
Query: 329 ctcacctacaacaaaaagaattcccatctagcctcctcaggtatttacacgagggggcag 388
|||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 ctcatctacaacaaaaa-atttcccatctagcctcctcaggtatttacacgagggggcag 154
Query: 389 a---tcttgattgagcctcttcaaataagagtcacggtctcgatcagcagttgacgccac 445
| |||||||||||||||||||||||||||||||||||||||||||||||| || || |
Sbjct: 153 acgatcttgattgagcctcttcaaataagagtcacggtctcgatcagcagttcacaccgc 94
Query: 446 attgccccaaggcagcagctttctgtgtcggggagatgaaaggatcgatcttcacccaca 505
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 attgccccaaggcggcagctttctgtgtcggggagatgaaaggatcgatcttcacccaca 34
Query: 506 gcaaggagaagatagatgcaagaaggatggacc 538
||||||||||||| || || || ||||||||||
Sbjct: 33 gcaaggagaagatggacgcgaggaggatggacc 1
>gb|BI245560.1|BI245560 IP1_67_A11.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 504
Score = 482 bits (243), Expect = e-133
Identities = 436/491 (88%), Gaps = 22/491 (4%)
Strand = Plus / Minus
Query: 31 ttatatagttgtgctaatagattacagtgttctgactgtctgcacacattccaaagaatg 90
||||||||||||||||| | ||||||||||||||||||| ||| |||| | |||||||||
Sbjct: 486 ttatatagttgtgctaaga-attacagtgttctgactgtttgctcacaatacaaagaatg 428
Query: 91 tagtc--tttgtgtataaataacagcattgccaatataagctcgtgtgaacagttcccac 148
|| || | || ||||||||||||||||||||| |||| | ||||||||||||||||| |
Sbjct: 427 ta-tcagtctgcgtataaataacagcattgcca-tata-gttcgtgtgaacagttccctc 371
Query: 149 aaacaaatgataatttactctaaaacaataaactgcacgcataacaaaacttcaaaattc 208
||||||||||||||||||||||||||||||||| |||| |||| |||| | ||||||||
Sbjct: 370 aaacaaatgataatttactctaaaacaataaacaccacgtataaaaaaaatgcaaaattc 311
Query: 209 acatcttacgctgctggctggcgctacatggaaggtagaaa-ggctccgtgattcttagt 267
||| ||||||||||||| || |||||| | |||||||||| |||||| ||||| |||||
Sbjct: 310 acaatttacgctgctggccggtgctacaggcaaggtagaaaaggctccatgatttttagt 251
Query: 268 ccgcagcagca---------ccggcacggaagaagctaatgaacagagacataactta-- 316
||||||||||| ||||||| ||||||||||| ||||||| |||||||||
Sbjct: 250 ccgcagcagcagcaccgtcaccggcaccaaagaagctaataaacagaggcataacttaga 191
Query: 317 tgcaaatccatcctcacctacaacaaaaagaattcccatctagcctcctcaggtatttac 376
|||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 190 tgcaaatccatcctcatctacaacaaaaa-atttcccatctagcctcctcaggtatttac 132
Query: 377 acgagggggcaga---tcttgattgagcctcttcaaataagagtcacggtctcgatcagc 433
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 acgagggggcagacgatcttgattgagcctcttcaaataagagtcacggtctcgatcagc 72
Query: 434 agttgacgccacattgccccaaggcagcagctttctgtgtcggggagatgaaaggatcga 493
|||| || || |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 71 agttcacaccgcattgccccaaggcggcagctttctgtgtcggggagatgaaaggatcga 12
Query: 494 tcttcacccac 504
|||||||||||
Sbjct: 11 tcttcacccac 1
>gb|BI075512.1|BI075512 IP1_21_D10.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 469
Score = 476 bits (240), Expect = e-132
Identities = 389/433 (89%), Gaps = 18/433 (4%)
Strand = Plus / Minus
Query: 101 gtataaataacagcattgccaatataagctcgtgtgaacagttcccacaaacaaatgata 160
||||||||||||||||||||| |||| | ||||||||||||||||| |||||||||||||
Sbjct: 431 gtataaataacagcattgcca-tata-gttcgtgtgaacagttccctcaaacaaatgata 374
Query: 161 atttactctaaaacaataaactgcacgcataacaaaacttcaaaattcacatcttacgct 220
||||||||||||||||||||| |||| |||| |||| | ||||||||||| |||||||
Sbjct: 373 atttactctaaaacaataaacaccacgtataaaaaaaatgcaaaattcacaatttacgct 314
Query: 221 gctggctggcgctacatggaaggtagaaa-ggctccgtgattcttagtccgcagcagca- 278
|||||| || |||||| | |||||||||| |||||| ||||| ||||||||||||||||
Sbjct: 313 gctggccggtgctacaggcaaggtagaaaaggctccatgatttttagtccgcagcagcag 254
Query: 279 --------ccggcacggaagaagctaatgaacagagacataactta--tgcaaatccatc 328
||||||| ||||||||||| ||||||| ||||||||| ||||||||||||
Sbjct: 253 caccgtcaccggcaccaaagaagctaataaacagaggcataacttagatgcaaatccatc 194
Query: 329 ctcacctacaacaaaaagaattcccatctagcctcctcaggtatttacacgagggggcag 388
|||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 ctcatctacaacaaaaa-atttcccatctagcctcctcaggtatttacacgagggggcag 135
Query: 389 a---tcttgattgagcctcttcaaataagagtcacggtctcgatcagcagttgacgccac 445
| |||||||||||||||||||||||||||||||||||||||||||||||| || || |
Sbjct: 134 acgatcttgattgagcctcttcaaataagagtcacggtctcgatcagcagttcacaccgc 75
Query: 446 attgccccaaggcagcagctttctgtgtcggggagatgaaaggatcgatcttcacccaca 505
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 attgccccaaggcggcagctttctgtgtcggggagatgaaaggatcgatcttcacccaca 15
Query: 506 gcaaggagaagat 518
|||||||||||||
Sbjct: 14 gcaaggagaagat 2
>gb|AW744834.1|AW744834 LG1_384_E04.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 513
Score = 470 bits (237), Expect = e-130
Identities = 450/511 (88%), Gaps = 25/511 (4%)
Strand = Plus / Minus
Query: 18 tacaacagctgcctt---atatagttgtgctaatagattacagtgttctgactgtctgca 74
||||||||||||||| ||||||||||||||| | || |||||||||||||||| |||
Sbjct: 506 tacaacagctgcctttttatatagttgtgctaagaaat-acagtgttctgactgtttgct 448
Query: 75 cacattccaaagaatgtagtc--tttgtgtataaataacagcattgccaatataagctcg 132
|||| | ||||||||||| || | || ||||||||||||||||||||| |||| | |||
Sbjct: 447 cacaatacaaagaatgta-tcagtctgcgtataaataacagcattgcca-tata-gttcg 391
Query: 133 tgtgaacagttcccacaaacaaatgataatttactctaaaacaataaactgcacgcataa 192
|||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 390 tgtgaacagttccctcaaacaaatgataatttactctaaaacaataaacaccacgtataa 331
Query: 193 caaaacttcaaaattcacatcttacgctgctggctggcgctacatggaaggtagaaa-gg 251
|||| | ||||||||||| ||||||||||||| || |||||| | |||||||||| ||
Sbjct: 330 aaaaaatgcaaaattcacaatttacgctgctggccggtgctacaggcaaggtagaaaagg 271
Query: 252 ctccgtgattcttagtccgcagcagca---------ccggcacggaagaagctaatgaac 302
|||| ||||| |||||||||||||||| ||||||| ||||||||||| |||
Sbjct: 270 ctccatgatttttagtccgcagcagcagcaccgtcaccggcaccaaagaagctaataaac 211
Query: 303 agagacataactta--tgcaaatccatcctcacctacaacaaaaagaattcccatctagc 360
||| ||||||||| |||||||||||||||| |||||||||||| | ||||||||||||
Sbjct: 210 ggaggcataacttagatgcaaatccatcctcatctacaacaaaaa-atttcccatctagc 152
Query: 361 ctcctcaggtatttacacgagggggcaga---tcttgattgagcctcttcaaataagagt 417
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 151 ctcctcaggtatttacacgagggggcagacgatcttgattgagcctcttcaaataagagt 92
Query: 418 cacggtctcgatcagcagttgacgccacattgccccaaggcagcagctttctgtgtcggg 477
|||||||||||||||||||| || || |||||||||||||| ||||||||||||||| ||
Sbjct: 91 cacggtctcgatcagcagttcacaccgcattgccccaaggcggcagctttctgtgtcagg 32
Query: 478 gagatgaaaggatcgatcttcacccacagca 508
|||||||||||||||||||||||||||||||
Sbjct: 31 gagatgaaaggatcgatcttcacccacagca 1
>gb|BI076267.1|BI076267 IP1_25_A08.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 428
Score = 468 bits (236), Expect = e-129
Identities = 385/429 (89%), Gaps = 18/429 (4%)
Strand = Plus / Minus
Query: 101 gtataaataacagcattgccaatataagctcgtgtgaacagttcccacaaacaaatgata 160
||||||||||||||||||||| |||| | ||||||||||||||||| |||||||||||||
Sbjct: 426 gtataaataacagcattgcca-tata-gttcgtgtgaacagttccctcaaacaaatgata 369
Query: 161 atttactctaaaacaataaactgcacgcataacaaaacttcaaaattcacatcttacgct 220
||||||||||||||||||||| |||| |||| |||| | ||||||||||| |||||||
Sbjct: 368 atttactctaaaacaataaacaccacgtataaaaaaaatgcaaaattcacaatttacgct 309
Query: 221 gctggctggcgctacatggaaggtagaaa-ggctccgtgattcttagtccgcagcagca- 278
|||||| || |||||| | |||||||||| |||||| ||||| ||||||||||||||||
Sbjct: 308 gctggccggtgctacaggcaaggtagaaaaggctccatgatttttagtccgcagcagcag 249
Query: 279 --------ccggcacggaagaagctaatgaacagagacataactta--tgcaaatccatc 328
||||||| ||||||||||| ||||||| ||||||||| ||||||||||||
Sbjct: 248 caccgtcaccggcaccaaagaagctaataaacagaggcataacttagatgcaaatccatc 189
Query: 329 ctcacctacaacaaaaagaattcccatctagcctcctcaggtatttacacgagggggcag 388
|||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ctcatctacaacaaaaa-atttcccatctagcctcctcaggtatttacacgagggggcag 130
Query: 389 a---tcttgattgagcctcttcaaataagagtcacggtctcgatcagcagttgacgccac 445
| |||||||||||||||||||||||||||||||||||||||||||||||| || || |
Sbjct: 129 acgatcttgattgagcctcttcaaataagagtcacggtctcgatcagcagttcacaccgc 70
Query: 446 attgccccaaggcagcagctttctgtgtcggggagatgaaaggatcgatcttcacccaca 505
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 attgccccaaggcggcagctttctgtgtcggggagatgaaaggatcgatcttcacccaca 10
Query: 506 gcaaggaga 514
|||||||||
Sbjct: 9 gcaaggaga 1
>gb|BG947491.1|BG947491 IP1_5_A08.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 426
Score = 464 bits (234), Expect = e-128
Identities = 383/427 (89%), Gaps = 18/427 (4%)
Strand = Plus / Minus
Query: 101 gtataaataacagcattgccaatataagctcgtgtgaacagttcccacaaacaaatgata 160
||||||||||||||||||||| |||| | ||||||||||||||||| |||||||||||||
Sbjct: 424 gtataaataacagcattgcca-tata-gttcgtgtgaacagttccctcaaacaaatgata 367
Query: 161 atttactctaaaacaataaactgcacgcataacaaaacttcaaaattcacatcttacgct 220
||||||||||||||||||||| |||| |||| |||| | ||||||||||| |||||||
Sbjct: 366 atttactctaaaacaataaacaccacgtataaaaaaaatgcaaaattcacaatttacgct 307
Query: 221 gctggctggcgctacatggaaggtagaaa-ggctccgtgattcttagtccgcagcagca- 278
|||||| || |||||| | |||||||||| |||||| ||||| ||||||||||||||||
Sbjct: 306 gctggccggtgctacaggcaaggtagaaaaggctccatgatttttagtccgcagcagcag 247
Query: 279 --------ccggcacggaagaagctaatgaacagagacataactta--tgcaaatccatc 328
||||||| ||||||||||| ||||||| ||||||||| ||||||||||||
Sbjct: 246 caccgtcaccggcaccaaagaagctaataaacagaggcataacttagatgcaaatccatc 187
Query: 329 ctcacctacaacaaaaagaattcccatctagcctcctcaggtatttacacgagggggcag 388
|||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ctcatctacaacaaaaa-atttcccatctagcctcctcaggtatttacacgagggggcag 128
Query: 389 a---tcttgattgagcctcttcaaataagagtcacggtctcgatcagcagttgacgccac 445
| |||||||||||||||||||||||||||||||||||||||||||||||| || || |
Sbjct: 127 acgatcttgattgagcctcttcaaataagagtcacggtctcgatcagcagttcacaccgc 68
Query: 446 attgccccaaggcagcagctttctgtgtcggggagatgaaaggatcgatcttcacccaca 505
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 attgccccaaggcggcagctttctgtgtcggggagatgaaaggatcgatcttcacccaca 8
Query: 506 gcaagga 512
|||||||
Sbjct: 7 gcaagga 1
>gb|CW482520.1|CW482520 fsbb001f242k13f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f242k13, DNA
sequence
Length = 651
Score = 460 bits (232), Expect = e-127
Identities = 271/284 (95%)
Strand = Plus / Minus
Query: 1086 ggatgtgattggatatacaatagtgttgatgtaagccagcctctccaaaagcttcaatcg 1145
||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 651 ggatgtgattggataaacaatggtgttgatgtaagccagcctctccaaaagcttcagtcg 592
Query: 1146 tccattgtaaccataccagataggacaatgtctactaagcagaatttccactgacccaag 1205
|||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||
Sbjct: 591 gccattgtaaccataccagataggacaatgtctgctgagcaaaatttccactgacccaag 532
Query: 1206 agcccaacggagcacctgattaagacgatcggaaagattgattggtgcagaacccttgaa 1265
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 531 agcccaacggagcacctgattaagacgatcagagagattgattggtgcagaacccttgaa 472
Query: 1266 acaaggtcgtggtggcatgcagtagattgattgccagccccttgcatgcattttaaaccc 1325
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 471 acaaggtcgtggtggcatgcagtagattgattgccatcctcttgcatgcattttaaaccc 412
Query: 1326 agtcagaatatcctccgttactgaaccatagatccagccaatct 1369
||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 411 agtcagaatatcctctgtaactgaaccatagatccagccaatct 368
Score = 347 bits (175), Expect = 5e-093
Identities = 193/199 (96%)
Strand = Plus / Minus
Query: 1368 ctcttttccccattcagttttgtcctcatatccacaactgatgacatggatagcttcctt 1427
|||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||
Sbjct: 274 ctcttttccccattcagttttgtcctcatacccacagctgattacatggatagcttcctt 215
Query: 1428 tagtagagaagctgggtttgttgaaggtggtatgccaccttgtgtcataaaggtggatgc 1487
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 214 tagtagagaagctgggtttgttgaaggtggtatgccaccttgagtcataaaggtggatgc 155
Query: 1488 aatgaaaataggagactgaccaaagcgtttctccaatttcctctgggacataagcactga 1547
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aatgaaaattggagactgaccaaagcgtttctccaatttcctctgggacataagcactga 95
Query: 1548 cctttcatcctcgtaacct 1566
|||||||||||| ||||||
Sbjct: 94 cctttcatcctcataacct 76
>gb|CW378708.1|CW378708 fsbb001f057j16k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f057j16, DNA
sequence
Length = 661
Score = 456 bits (230), Expect = e-126
Identities = 260/270 (96%)
Strand = Plus / Minus
Query: 2644 tacctcaatgcaagcctgtcaagatatgtctcacggttgattggataccattttgggaac 2703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 tacctcaatgcaagcctgtcaagatatgtctcacggttgattggataccattttgggaac 348
Query: 2704 tgatctagaagccaagacaaggcaaaccagacctcgcagataacagatactagccataat 2763
||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 347 tgatcaagaagccaagacaaggcaaaccagacctcacagataacagatactagccacaat 288
Query: 2764 ccataagcatcacgcactggatgactgacacgatactggaagaagaagcacaggatgata 2823
|||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 287 ccataagcattattcactggatgactgacacgatattggaagaagaagcacaggatgata 228
Query: 2824 agacggagaatgatcactacccggtaaaggttgagctggtttgaggaaattggcacgata 2883
||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||
Sbjct: 227 agacggagaatgatcactatccggtaaaggttgagctggtttgagggaattggcacaata 168
Query: 2884 cggctcaaaggtagccgtgcatcatcaacc 2913
||||||||||||||||||||||||||||||
Sbjct: 167 cggctcaaaggtagccgtgcatcatcaacc 138
Score = 295 bits (149), Expect = 2e-077
Identities = 161/165 (97%)
Strand = Plus / Minus
Query: 2484 atcatcagaaacatagcatgacactttgtcaacagggtaatccacagaaagaatggacaa 2543
|||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 661 atcatcagaaacatagcatgacactttgtcgacagggtaatccacagcaagaatggacaa 602
Query: 2544 aacagtgttggctgtgatcagtggaggttccttcaatggatccactgtactgacgaagac 2603
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aacagtgttggccgtgatcagtggaggttccttcaatggatccactgtactgacgaagac 542
Query: 2604 atcaatgggagccagctgtgatggctctccctctctatcatacct 2648
||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 541 atcaatgggagccagctgtgacggctctccctctctatcatacct 497
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 972,565
Number of Sequences: 832831
Number of extensions: 972565
Number of successful extensions: 264436
Number of sequences better than 0.5: 247
Number of HSP's better than 0.5 without gapping: 246
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 263693
Number of HSP's gapped (non-prelim): 559
length of query: 3838
length of database: 491,359,669
effective HSP length: 21
effective length of query: 3817
effective length of database: 473,870,218
effective search space: 1808762622106
effective search space used: 1808762622106
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)