BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2430806.2.1
(1380 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN137686.1|CN137686 OX1_58_H08.g1_A002 Oxidatively-stres... 1298 0.0
gb|CN137608.1|CN137608 OX1_58_H08.b1_A002 Oxidatively-stres... 1005 0.0
gb|BE356448.1|BE356448 DG1_125_E05.b1_A002 Dark Grown 1 (DG... 904 0.0
gb|BF587903.1|BF587903 FM1_34_B08.g1_A003 Floral-Induced Me... 900 0.0
gb|BG410776.1|BG410776 EM1_25_G09.g1_A002 Embryo 1 (EM1) So... 852 0.0
gb|BI211583.1|BI211583 IP1_59_B12.g1_A002 Immature pannicle... 846 0.0
gb|BF587255.1|BF587255 FM1_34_B08.b1_A003 Floral-Induced Me... 835 0.0
gb|BG053879.1|BG053879 RHIZ2_11_A11.b1_A003 Rhizome2 (RHIZ2... 833 0.0
gb|BG465532.1|BG465532 RHIZ2_45_F11.b1_A003 Rhizome2 (RHIZ2... 805 0.0
gb|BG411106.1|BG411106 EM1_25_G09.b1_A002 Embryo 1 (EM1) So... 733 0.0
gb|BG241535.1|BG241535 RHIZ2_50_F09.g1_A003 Rhizome2 (RHIZ2... 722 0.0
gb|BG241742.1|BG241742 RHIZ2_50_F09.b1_A003 Rhizome2 (RHIZ2... 718 0.0
gb|CF429032.1|CF429032 PH1_19_C09.b1_A002 Phosphorous-defic... 652 0.0
gb|CW282502.1|CW282502 104_758_11408743_148_35469_022 Sorgh... 349 4e-094
gb|CF429134.1|CF429134 PH1_19_C09.g1_A002 Phosphorous-defic... 329 4e-088
gb|BE356519.1|BE356519 DG1_125_E05.g1_A002 Dark Grown 1 (DG... 285 5e-075
gb|CL176358.1|CL176358 104_382_10893074_116_31763_290 Sorgh... 274 2e-071
gb|CW132322.1|CW132322 104_515_11116148_116_34797_070 Sorgh... 274 2e-071
gb|CW142262.1|CW142262 104_533_11136761_116_34938_071 Sorgh... 274 2e-071
gb|CW142263.1|CW142263 104_533_11136761_148_34942_071 Sorgh... 274 2e-071
gb|CW315578.1|CW315578 104_806_11472438_116_35824_019 Sorgh... 274 2e-071
gb|CW334306.1|CW334306 104_832_11482429_116_36054_051 Sorgh... 274 2e-071
gb|CW334307.1|CW334307 104_832_11482429_148_36053_051 Sorgh... 270 3e-070
gb|CW059428.1|CW059428 104_302_10519312_114_30165 Sorghum m... 268 1e-069
gb|CW123090.1|CW123090 104_502_11111025_148_34685_043 Sorgh... 268 1e-069
gb|CW187409.1|CW187409 104_605_11167076_148_36715_068 Sorgh... 268 1e-069
gb|CW190842.1|CW190842 104_612_11174724_116_36760_038 Sorgh... 268 1e-069
gb|CW205739.1|CW205739 104_634_11187225_116_36951_043 Sorgh... 268 1e-069
gb|CW209356.1|CW209356 104_639_11189196_148_36987_042 Sorgh... 268 1e-069
gb|CL176359.1|CL176359 104_382_10893074_148_31762_290 Sorgh... 262 8e-068
gb|BG053579.1|BG053579 RHIZ2_11_A11.g1_A003 Rhizome2 (RHIZ2... 244 2e-062
gb|CW315579.1|CW315579 104_806_11472438_148_35828_019 Sorgh... 224 2e-056
gb|CW265341.1|CW265341 104_734_11231821_116_35257_053 Sorgh... 204 2e-050
gb|CW129612.1|CW129612 104_511_11114659_116_34764_068 Sorgh... 172 6e-041
gb|CW334499.1|CW334499 104_833_11482534_116_36073_095 Sorgh... 172 6e-041
gb|CW123089.1|CW123089 104_502_11111025_116_34689_043 Sorgh... 159 8e-037
gb|CW282501.1|CW282501 104_758_11408743_116_35465_022 Sorgh... 159 8e-037
gb|BG050763.1|BG050763 FM1_70_C03.b1_A003 Floral-Induced Me... 153 5e-035
gb|CW059429.1|CW059429 104_302_10519312_115_30168 Sorghum m... 143 5e-032
gb|CW190843.1|CW190843 104_612_11174724_148_36759_038 Sorgh... 143 5e-032
gb|CW205740.1|CW205740 104_634_11187225_148_36952_043 Sorgh... 143 5e-032
gb|CW265342.1|CW265342 104_734_11231821_148_35261_053 Sorgh... 143 5e-032
gb|CW414148.1|CW414148 fsbb001f113k12f0 Sorghum methylation... 143 5e-032
gb|CW499891.1|CW499891 fsbb001f294o04k0 Sorghum methylation... 143 5e-032
gb|CW209355.1|CW209355 104_639_11189196_116_36988_042 Sorgh... 127 3e-027
gb|CW414149.1|CW414149 fsbb001f113k12k0 Sorghum methylation... 127 3e-027
gb|BG053873.1|BG053873 RHIZ2_11_A01.b1_A003 Rhizome2 (RHIZ2... 123 5e-026
gb|CW132323.1|CW132323 104_515_11116148_148_34793_070 Sorgh... 121 2e-025
gb|CW334500.1|CW334500 104_833_11482534_148_36072_095 Sorgh... 98 3e-018
gb|CL152401.1|CL152401 104_335_10779931_114_31363_331 Sorgh... 90 6e-016
gb|CL152402.1|CL152402 104_335_10779931_116_31364_331 Sorgh... 90 6e-016
gb|CW187408.1|CW187408 104_605_11167076_116_36716_068 Sorgh... 90 6e-016
gb|CW475078.1|CW475078 fsbb001f231e07f0 Sorghum methylation... 70 6e-010
gb|CF484408.1|CF484408 POL1_25_D07.b1_A002 Pollen Sorghum b... 54 4e-005
gb|CX622836.1|CX622836 GABR1_66_F08.b1_A002 GA- or brassino... 54 4e-005
gb|CW134972.1|CW134972 104_519_11117593_148_34826_009 Sorgh... 42 0.13
gb|CW260178.1|CW260178 104_726_11228826_116_35193_067 Sorgh... 42 0.13
gb|CW260179.1|CW260179 104_726_11228826_148_35189_067 Sorgh... 42 0.13
>gb|CN137686.1|CN137686 OX1_58_H08.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_58_H08_A002 5', mRNA sequence
Length = 848
Score = 1298 bits (655), Expect = 0.0
Identities = 801/847 (94%), Gaps = 12/847 (1%)
Strand = Plus / Plus
Query: 49 cctttccgtttaaggcagcaagcaggagcagacaggagg-------cgccgagagcccag 101
|||||||||| | |||||||||||| ||||||||||||| ||||||||| ||||
Sbjct: 3 cctttccgtt-acggcagcaagcag-agcagacaggaggcgccgcccgccgagagtccag 60
Query: 102 cgtcggagat---ctccgccgccatggagacgctggccagcgccatgcggcgcgagaacc 158
|||||||||| |||||| ||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 61 cgtcggagatctcctccgcagccatggagtcgctggccagcgccatgcgtcgcgagaacc 120
Query: 159 gccggtccaaggccccgccctcctcctctgcttcctccgccctcgcctcgggcagggtcc 218
||||||||||||||||| |||||||||| || ||||| |||||||||||||||||||||
Sbjct: 121 gccggtccaaggccccgtcctcctcctccgccgcctccaccctcgcctcgggcagggtcc 180
Query: 219 ctctcgtcatggccttcctctcctgcctcgcctggctctacgtcgccggccgtttgtggc 278
||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 181 ctctcgtcatggctttcctctcctgcctcgcctggctctacgtcgccggccggttgtggc 240
Query: 279 aggacgcgcagacccgggcgatcctgtccggcctcctcgagaagagctctaccagcgtcc 338
||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||
Sbjct: 241 aggacgcgcagacccgggcgatcctctccggcctcctcgagaagagttctggcagcgtcc 300
Query: 339 cgaaggtgctctcggtggaggacaagcttaggaaccttgggtgcaaggcgattggaagga 398
||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |
Sbjct: 301 cgaaggtgctctcggtggaggacaagcttaggaacctcggatgcaaggcgattggaagca 360
Query: 399 aaattgttgaggcggagatggacctgaccaaggccaagagcgaggggtacctgtggggga 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaattgttgaggcggagatggacctgaccaaggccaagagcgaggggtacctgtggggga 420
Query: 459 acaggactgcagctgtggactccgacaagaagcagcagcttcttgccgtcattggagttt 518
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acaggactgcagctgtcgattccgacaagaagcagcagcttcttgccgtcattggagttt 480
Query: 519 acactgggtttggctcccgtctcaagaggaacgtcttccgtggctcctggatgccaagag 578
|||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||
Sbjct: 481 acactgggtttggctcccgtctcaggaggaatgtcttccgtggctcctggatgccgagag 540
Query: 579 gtgatgctctgaagaagcttgaggaaaagggtgtagctattcgttttgttattggtcgga 638
|||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 541 gtgatgctctgaagaagcttgaggaaaagggtgtagttattcgctttgttattggtcgga 600
Query: 639 gtgcaaatcgaggtgatagcttggaccgtaatattgatgatgaaaatcggcagacaaagg 698
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 601 gtgcaaatcgaggtgatagcttggaccgtaatattgacgatgaaaatcggcagacaaagg 660
Query: 699 acttcttgattcttgaaagtcatgaagaggctgcagaagaattaccgagcaaagcaaaaa 758
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 661 acttcttgattcttgaaagtcatgaagaggctgcagaagaattgccgagcaaagcaaagt 720
Query: 759 ttttcttcagtgctgcagttgaagcctgggatgcagaattttatgtcaaagttgaagata 818
||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||
Sbjct: 721 ttttcttcagtgctgcagttgaaacctgggatgcagaattctatgtcaaagttgaggata 780
Query: 819 acattaatcttgacttagctgggttaattgagatgctcgaaggccgtcgaggtagccaag 878
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 781 acattaatcttgacttagctgggttaatcgagatgctcgaaggccgtcgaggtagccaag 840
Query: 879 gattgta 885
|||||||
Sbjct: 841 gattgta 847
>gb|CN137608.1|CN137608 OX1_58_H08.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_58_H08_A002 3', mRNA sequence
Length = 791
Score = 1005 bits (507), Expect = 0.0
Identities = 641/684 (93%), Gaps = 10/684 (1%)
Strand = Plus / Plus
Query: 623 tttgttattggtcggagtgcaaatcgaggtgatagcttggaccgtaatattgatgatgaa 682
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 5 tttgttattggtcggagtgcaaatcgaggtgatagcttggaccgtaatattgccgatgaa 64
Query: 683 aatcggcagacaaaggacttcttgattcttgaaagtcatgaagaggctgcagaagaatta 742
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 aatcggcagacaaaggacttcttgattcttgaaagtcatgaagaggctgcagaagaattg 124
Query: 743 ccgagcaaagcaaaaattttcttcagtgctgcagttgaagcctgggatgcagaattttat 802
|||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 125 ccgagcaaagcaaagtttttcttcagtgctgcagttgaaacctgggatgcagaattttat 184
Query: 803 gtcaaagttgaagataacattaatcttgacttagctgggttaattgagatgctcgaaggc 862
||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 185 gtcaaagttgaggataacattaatcttgacttagctgggttaatcgagatgctcgaaggc 244
Query: 863 cgtcgaggtagccaaggattgtacatgggttgtatgaaatcagggatggtcataagtgaa 922
||| ||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||
Sbjct: 245 cgttgaggtagccaaggattgtatatgggttgtatgaaatcaggggttgtcataagtgaa 304
Query: 923 gagggccaacaatggtatgaacctgagtggtggaaatttggagattcaaaaacgtatttt 982
||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 305 gagggtcaacaatggtatgaacctgactggtggaaatttggagattcaaaaacgtatttt 364
Query: 983 cgacacgcttctggttctttgtttatcctctcaaaaaatttggctcgctacatcaacata 1042
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 cgacaggcttctggttctttgtttatcctctcaaaaaatttggctcgctacatcaacata 424
Query: 1043 aatagtgcgtcactgcagagttatgcacacgatgatatatcagtaggttcatggatgatg 1102
|||||||| || || ||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 425 aatagtgcatcgctccagagttatgcacacgacgacatatcagtaggttcatggatgatg 484
Query: 1103 ggactgaatgcaacttacgtggatgatgaccggttgtgctgcagcagttccagacaagag 1162
|||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||
Sbjct: 485 ggactgaatgcaacttacgtcgacgatgaccggttgtgctgcagcagctccagacaagag 544
Query: 1163 aaaatctgttccaatgcttgag-----cggaaggcgtggctgctggcctgttgctgtaca 1217
||| ||||||| |||||||||| ||||||||||| ||| ||||||||||||| |||
Sbjct: 545 aaagtctgttctaatgcttgaggtgagcggaaggcgtgactgttggcctgttgctgcaca 604
Query: 1218 tcctgatgaagattttgcacacctgtcattttgtatacac----tgctttcgtgaaccgg 1273
||||||||||||||||| ||| ||||||||||||||||| |||||| ||||| |||
Sbjct: 605 tcctgatgaagattttgtacatctgtcattttgtatacatagaatgcttttgtgaatcgg 664
Query: 1274 aaaa-ggctactatccagatagaa 1296
|||| |||||||||||||||||||
Sbjct: 665 aaaaaggctactatccagatagaa 688
>gb|BE356448.1|BE356448 DG1_125_E05.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 569
Score = 904 bits (456), Expect = 0.0
Identities = 538/565 (95%), Gaps = 3/565 (0%)
Strand = Plus / Plus
Query: 88 cgccgagagcccagcgtcggagatctccgccgc---catggagacgctggccagcgccat 144
||||||||| |||||||||||||||||| |||| ||||||| ||||||||||||||||
Sbjct: 5 cgccgagagtccagcgtcggagatctcctccgcagccatggagtcgctggccagcgccat 64
Query: 145 gcggcgcgagaaccgccggtccaaggccccgccctcctcctctgcttcctccgccctcgc 204
||| ||||||||||||||||||||||||||| |||||||||| || ||||| |||||||
Sbjct: 65 gcgtcgcgagaaccgccggtccaaggccccgtcctcctcctccgccgcctccaccctcgc 124
Query: 205 ctcgggcagggtccctctcgtcatggccttcctctcctgcctcgcctggctctacgtcgc 264
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 125 ctcgggcagggtccctctcgtcatggctttcctctcctgcctcgcctggctctacgtcgc 184
Query: 265 cggccgtttgtggcaggacgcgcagacccgggcgatcctgtccggcctcctcgagaagag 324
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 185 cggccggttgtggcaggacgcgcagacccgggcgatcctctccggcctcctcgagaagag 244
Query: 325 ctctaccagcgtcccgaaggtgctctcggtggaggacaagcttaggaaccttgggtgcaa 384
||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 245 ttctggcagcgtcccgaaggtgctctcggtggaggacaagcttaggaacctcggatgcaa 304
Query: 385 ggcgattggaaggaaaattgttgaggcggagatggacctgaccaaggccaagagcgaggg 444
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ggcgattggaagcaaaattgttgaggcggagatggacctgaccaaggccaagagcgaggg 364
Query: 445 gtacctgtgggggaacaggactgcagctgtggactccgacaagaagcagcagcttcttgc 504
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 365 gtacctgtgggggaacaggactgcagctgtcgattccgacaagaagcagcagcttcttgc 424
Query: 505 cgtcattggagtttacactgggtttggctcccgtctcaagaggaacgtcttccgtggctc 564
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 425 cgtcattggagtttacactgggtttggctcccgtctcaagaggaatgtcttccgtggctc 484
Query: 565 ctggatgccaagaggtgatgctctgaagaagcttgaggaaaagggtgtagctattcgttt 624
||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 485 ctggatgccgagaggtgatgctctgaagaagcttgaggaaaagggtgtagttattcgttt 544
Query: 625 tgttattggtcggagtgcaaatcga 649
||||||||||||||||||| |||||
Sbjct: 545 tgttattggtcggagtgcanatcga 569
>gb|BF587903.1|BF587903 FM1_34_B08.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 634
Score = 900 bits (454), Expect = 0.0
Identities = 568/606 (93%), Gaps = 5/606 (0%)
Strand = Plus / Plus
Query: 656 agcttggaccgtaatattgatgatgaaaatcggcagacaaaggacttcttgattcttgaa 715
|||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 agcttggaccgtaatattgacgatgaaagtcggcagacaaaggacttcttgattcttgaa 60
Query: 716 agtcatgaagaggctgcagaagaattaccgagcaaagcaaaaattttcttcagtgctgca 775
|||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 61 agtcatgaagaggctgcagaagaattgccgagcaaagcaaagtttttcttcagtgctgca 120
Query: 776 gttgaagcctgggatgcagaattttatgtcaaagttgaagataacattaatcttgactta 835
|||||| |||||||||||||||| ||||||||||| || |||||||||||||||||||||
Sbjct: 121 gttgaaacctgggatgcagaattctatgtcaaagtcgaggataacattaatcttgactta 180
Query: 836 gctgggttaattgagatgctcgaaggccgtcgaggtagccaaggattgtacatgggttgt 895
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gctgggttaatcgagatgctcgaaggccgtcgaggtagccaaggattgtacatgggttgt 240
Query: 896 atgaaatcagggatggtcataagtgaagagggccaacaatggtatgaacctgagtggtgg 955
|||||||||||| | ||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 241 atgaaatcaggggttgtcataagtgaagaggggcaacaatggtatgaacctgactggtgg 300
Query: 956 aaatttggagattcaaaaacgtattttcgacacgcttctggttctttgtttatcctctca 1015
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 301 aaatttggagattcaaaaacgtattttcgacatgcttctggttctttgtttatcctctca 360
Query: 1016 aaaaatttggctcgctacatcaacataaatagtgcgtcactgcagagttatgcacacgat 1075
||||||||||| ||||||||||||||||||||||| || || |||||||||||||||||
Sbjct: 361 aaaaatttggcacgctacatcaacataaatagtgcatcgctccagagttatgcacacgac 420
Query: 1076 gatatatcagtaggttcatggatgatgggactgaatgcaacttacgtggatgatgaccgg 1135
|| |||||||| || |||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 421 gacatatcagtggggtcatggatgatgggactgaatgcaacttacgtcgacgatgaccgg 480
Query: 1136 ttgtgctgcagcagttccagacaagagaaaatctgttccaatgct-----tgagcggaag 1190
|||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||
Sbjct: 481 ttgtgctgcagcagttccagacaagagaaagtctgttctaatgcttgaggtgagcggaag 540
Query: 1191 gcgtggctgctggcctgttgctgtacatcctgatgaagattttgcacacctgtcattttg 1250
||||| ||||||| ||||| ||| |||||||||||||||||||| ||| |||||||||||
Sbjct: 541 gcgtgactgctggtctgttactgcacatcctgatgaagattttgtacatctgtcattttg 600
Query: 1251 tataca 1256
||||||
Sbjct: 601 tataca 606
>gb|BG410776.1|BG410776 EM1_25_G09.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 637
Score = 852 bits (430), Expect = 0.0
Identities = 558/599 (93%), Gaps = 10/599 (1%)
Strand = Plus / Plus
Query: 708 ttcttgaaagtcatgaagaggctgcagaagaattaccgagcaaagcaaaaattttcttca 767
|||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 1 ttcttgaaagtcatgaagaggctgcagaagaattgccgagcaaagcaaagtttttcttca 60
Query: 768 gtgctgcagttgaagcctgggatgcagaattttatgtcaaagttgaagataacattaatc 827
|||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 61 gtgctgcagttgaaacctgggatgcagaattctatgtcaaagttgaggataacattaatc 120
Query: 828 ttgacttagctgggttaattgagatgctcgaaggccgtcgaggtagccaaggattgtaca 887
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 121 ttgacttagctgggttaatcgagatgctcgaaggccgtcgaggtagccaaggattgtata 180
Query: 888 tgggttgtatgaaatcagggatggtcataagtgaagagggccaacaatggtatgaacctg 947
|||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||
Sbjct: 181 tgggttgtatgaaatcaggggttgtcataagtgaagagggtcaacaatggtatgaacctg 240
Query: 948 agtggtggaaatttggagattcaaaaacgtattttcgacacgcttctggttctttgttta 1007
| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 241 actggtggaaatttggagattcaaaaacgtattttcgacatgcttctggttctttgttta 300
Query: 1008 tcctctcaaaaaatttggctcgctacatcaacataaatagtgcgtcactgcagagttatg 1067
||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||
Sbjct: 301 tcctctcaaaaaatttggctcgctacatcaacataaatagtgcatcgctccagagttatg 360
Query: 1068 cacacgatgatatatcagtaggttcatggatgatgggactgaatgcaacttacgtggatg 1127
||||||| || |||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 361 cacacgacgacatatcagtaggttcatggatgatgggactgaatgcaacttacgtcgacg 420
Query: 1128 atgaccggttgtgctgcagcagttccagacaagagaaaatctgttccaatgcttgag--- 1184
|||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||
Sbjct: 421 atgaccggttgtgctgcagcagctccagacaagagaaagtctgttctaatgcttgaggtg 480
Query: 1185 --cggaaggcgtggctgctggcctgttgctgtacatcctgatgaagattttgcacacctg 1242
||||||||||| ||| ||||||||||||| |||||||||||||||||||| ||| |||
Sbjct: 481 agcggaaggcgtgactgttggcctgttgctgcacatcctgatgaagattttgtacatctg 540
Query: 1243 tcattttgtatacac----tgctttcgtgaaccggaaaa-ggctactatccagatagaa 1296
|||||||||||||| |||||| ||||| ||||||| |||||||||||||||||||
Sbjct: 541 tcattttgtatacatagaatgcttttgtgaatcggaaaaaggctactatccagatagaa 599
>gb|BI211583.1|BI211583 IP1_59_B12.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 641
Score = 846 bits (427), Expect = 0.0
Identities = 555/596 (93%), Gaps = 10/596 (1%)
Strand = Plus / Plus
Query: 711 ttgaaagtcatgaagaggctgcagaagaattaccgagcaaagcaaaaattttcttcagtg 770
||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 1 ttgaaagtcatgaagaggctgcagaagaattgccgagcaaagcaaagtttttcttcagtg 60
Query: 771 ctgcagttgaagcctgggatgcagaattttatgtcaaagttgaagataacattaatcttg 830
||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 61 ctgcagttgaaacctgggatgcagaattctatgtcaaagttgaggataacattaatcttg 120
Query: 831 acttagctgggttaattgagatgctcgaaggccgtcgaggtagccaaggattgtacatgg 890
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 121 acttagctgggttaatcgagatgctcgaaggccgtcgaggtagccaaggattgtatatgg 180
Query: 891 gttgtatgaaatcagggatggtcataagtgaagagggccaacaatggtatgaacctgagt 950
||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||| |
Sbjct: 181 gttgtatgaaatcaggggttgtcataagtgaagagggtcaacaatggtatgaacctgact 240
Query: 951 ggtggaaatttggagattcaaaaacgtattttcgacacgcttctggttctttgtttatcc 1010
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 241 ggtggaaatttggagattcaaaaacgtattttcgacatgcttctggttctttgtttatcc 300
Query: 1011 tctcaaaaaatttggctcgctacatcaacataaatagtgcgtcactgcagagttatgcac 1070
|||||||||||||||||||||||||||||||||||||||| || || |||||||||||||
Sbjct: 301 tctcaaaaaatttggctcgctacatcaacataaatagtgcatcgctccagagttatgcac 360
Query: 1071 acgatgatatatcagtaggttcatggatgatgggactgaatgcaacttacgtggatgatg 1130
|||| || |||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 361 acgacgacatatcagtaggttcatggatgatgggactgaatgcaacttacgtcgacgatg 420
Query: 1131 accggttgtgctgcagcagttccagacaagagaaaatctgttccaatgcttgag-----c 1185
||||||||||||||||||| ||||||||||||||| ||||||| |||||||||| |
Sbjct: 421 accggttgtgctgcagcagctccagacaagagaaagtctgttctaatgcttgaggtgagc 480
Query: 1186 ggaaggcgtggctgctggcctgttgctgtacatcctgatgaagattttgcacacctgtca 1245
|||||||||| ||| ||||||||||||| |||||||||||||||||||| ||| ||||||
Sbjct: 481 ggaaggcgtgactgttggcctgttgctgcacatcctgatgaagattttgtacatctgtca 540
Query: 1246 ttttgtatacac----tgctttcgtgaaccggaaaa-ggctactatccagatagaa 1296
||||||||||| |||||| ||||| ||||||| |||||||||||||||||||
Sbjct: 541 ttttgtatacatagaatgcttttgtgaatcggaaaaaggctactatccagatagaa 596
>gb|BF587255.1|BF587255 FM1_34_B08.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 517
Score = 835 bits (421), Expect = 0.0
Identities = 483/503 (96%), Gaps = 3/503 (0%)
Strand = Plus / Plus
Query: 102 cgtcggagatctccgccgc---catggagacgctggccagcgccatgcggcgcgagaacc 158
|||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||
Sbjct: 15 cgtcggagatctccgcagcagccatggagtcgctggccagcgccatgcggcgcgagaacc 74
Query: 159 gccggtccaaggccccgccctcctcctctgcttcctccgccctcgcctcgggcagggtcc 218
||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 75 gccggtccaaggccccgtcctcctcctccgctgcctccgccctcgcctcgggcagggtcc 134
Query: 219 ctctcgtcatggccttcctctcctgcctcgcctggctctacgtcgccggccgtttgtggc 278
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 135 ctctcgtcatggccttcctctcctgcctcgcctggctctacgtcgccggccggttgtggc 194
Query: 279 aggacgcgcagacccgggcgatcctgtccggcctcctcgagaagagctctaccagcgtcc 338
||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||
Sbjct: 195 aggacgcgcagacccgggcgatcctctccggcctcctcgagaagagttctggcagcgtcc 254
Query: 339 cgaaggtgctctcggtggaggacaagcttaggaaccttgggtgcaaggcgattggaagga 398
||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |
Sbjct: 255 cgaaggtgctctcggtggaggacaagcttaggaacctcggatgcaaggcgattggaagca 314
Query: 399 aaattgttgaggcggagatggacctgaccaaggccaagagcgaggggtacctgtggggga 458
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 aaattgttgaggcagagatggacctgaccaaggccaagagcgaggggtacctgtggggga 374
Query: 459 acaggactgcagctgtggactccgacaagaagcagcagcttcttgccgtcattggagttt 518
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 acaggactgcagctgtcgactccgacaagaagcagcagcttcttgccgtcattggagttt 434
Query: 519 acactgggtttggctcccgtctcaagaggaacgtcttccgtggctcctggatgccaagag 578
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 435 acactgggtttggttcccgtctcaagaggaacgtcttccgtggctcctggatgccgagag 494
Query: 579 gtgatgctctgaagaagcttgag 601
|||||||||||||||||||||||
Sbjct: 495 gtgatgctctgaagaagcttgag 517
>gb|BG053879.1|BG053879 RHIZ2_11_A11.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 517
Score = 833 bits (420), Expect = 0.0
Identities = 482/502 (96%), Gaps = 3/502 (0%)
Strand = Plus / Plus
Query: 102 cgtcggagatctccgccgc---catggagacgctggccagcgccatgcggcgcgagaacc 158
|||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||
Sbjct: 16 cgtcggagatctccgcagcagccatggagtcgctggccagcgccatgcggcgcgagaacc 75
Query: 159 gccggtccaaggccccgccctcctcctctgcttcctccgccctcgcctcgggcagggtcc 218
||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 76 gccggtccaaggccccgtcctcctcctccgctgcctccgccctcgcctcgggcagggtcc 135
Query: 219 ctctcgtcatggccttcctctcctgcctcgcctggctctacgtcgccggccgtttgtggc 278
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 136 ctctcgtcatggccttcctctcctgcctcgcctggctctacgtcgccggccggttgtggc 195
Query: 279 aggacgcgcagacccgggcgatcctgtccggcctcctcgagaagagctctaccagcgtcc 338
||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||
Sbjct: 196 aggacgcgcagacccgggcgatcctctccggcctcctcgagaagagttctggcagcgtcc 255
Query: 339 cgaaggtgctctcggtggaggacaagcttaggaaccttgggtgcaaggcgattggaagga 398
||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |
Sbjct: 256 cgaaggtgctctcggtggaggacaagcttaggaacctcggatgcaaggcgattggaagca 315
Query: 399 aaattgttgaggcggagatggacctgaccaaggccaagagcgaggggtacctgtggggga 458
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 aaattgttgaggcagagatggacctgaccaaggccaagagcgaggggtacctgtggggga 375
Query: 459 acaggactgcagctgtggactccgacaagaagcagcagcttcttgccgtcattggagttt 518
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 acaggactgcagctgtcgactccgacaagaagcagcagcttcttgccgtcattggagttt 435
Query: 519 acactgggtttggctcccgtctcaagaggaacgtcttccgtggctcctggatgccaagag 578
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 436 acactgggtttggttcccgtctcaagaggaacgtcttccgtggctcctggatgccgagag 495
Query: 579 gtgatgctctgaagaagcttga 600
||||||||||||||||||||||
Sbjct: 496 gtgatgctctgaagaagcttga 517
>gb|BG465532.1|BG465532 RHIZ2_45_F11.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 492
Score = 805 bits (406), Expect = 0.0
Identities = 468/488 (95%), Gaps = 3/488 (0%)
Strand = Plus / Plus
Query: 102 cgtcggagatctccgccgc---catggagacgctggccagcgccatgcggcgcgagaacc 158
|||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||
Sbjct: 5 cgtcggagatctccgcagcagccatggagtcgctggccagcgccatgcggcgcgagaacc 64
Query: 159 gccggtccaaggccccgccctcctcctctgcttcctccgccctcgcctcgggcagggtcc 218
||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 65 gccggtccaaggccccgtcctcctcctccgctgcctccgccctcgcctcgggcagggtcc 124
Query: 219 ctctcgtcatggccttcctctcctgcctcgcctggctctacgtcgccggccgtttgtggc 278
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 125 ctctcgtcatggccttcctctcctgcctcgcctggctctacgtcgccggccggttgtggc 184
Query: 279 aggacgcgcagacccgggcgatcctgtccggcctcctcgagaagagctctaccagcgtcc 338
||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||
Sbjct: 185 aggacgcgcagacccgggcgatcctctccggcctcctcgagaagagttctggcagcgtcc 244
Query: 339 cgaaggtgctctcggtggaggacaagcttaggaaccttgggtgcaaggcgattggaagga 398
||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |
Sbjct: 245 cgaaggtgctctcggtggaggacaagcttaggaacctcggatgcaaggcgattggaagca 304
Query: 399 aaattgttgaggcggagatggacctgaccaaggccaagagcgaggggtacctgtggggga 458
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 aaattgttgaggcagagatggacctgaccaaggccaagagcgaggggtacctgtggggga 364
Query: 459 acaggactgcagctgtggactccgacaagaagcagcagcttcttgccgtcattggagttt 518
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 acaggactgcagctgtcgactccgacaagaagcagcagcttcttgccgtcattggagttt 424
Query: 519 acactgggtttggctcccgtctcaagaggaacgtcttccgtggctcctggatgccaagag 578
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 425 acactgggtttggttcccgtctcaagaggaacgtcttccgtggctcctggatgccgagag 484
Query: 579 gtgatgct 586
||||||||
Sbjct: 485 gtgatgct 492
>gb|BG411106.1|BG411106 EM1_25_G09.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 484
Score = 733 bits (370), Expect = 0.0
Identities = 441/464 (95%), Gaps = 3/464 (0%)
Strand = Plus / Plus
Query: 88 cgccgagagcccagcgtcggagatctccgccgc---catggagacgctggccagcgccat 144
||||||||| |||||||||||||||||| |||| ||||||| ||||||||||||||||
Sbjct: 21 cgccgagagtccagcgtcggagatctcctccgcagccatggagtcgctggccagcgccat 80
Query: 145 gcggcgcgagaaccgccggtccaaggccccgccctcctcctctgcttcctccgccctcgc 204
||| ||||||||||||||||||||||||||| |||||||||| || ||||| |||||||
Sbjct: 81 gcgtcgcgagaaccgccggtccaaggccccgtcctcctcctccgccgcctccaccctcgc 140
Query: 205 ctcgggcagggtccctctcgtcatggccttcctctcctgcctcgcctggctctacgtcgc 264
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 141 ctcgggcagggtccctctcgtcatggctttcctctcctgcctcgcctggctctacgtcgc 200
Query: 265 cggccgtttgtggcaggacgcgcagacccgggcgatcctgtccggcctcctcgagaagag 324
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 cggccggttgtggcaggacgcgcagacccgggcgatcctctccggcctcctcgagaagag 260
Query: 325 ctctaccagcgtcccgaaggtgctctcggtggaggacaagcttaggaaccttgggtgcaa 384
||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 261 ttctggcagcgtcccgaaggtgctctcggtggaggacaagcttaggaacctcggatgcaa 320
Query: 385 ggcgattggaaggaaaattgttgaggcggagatggacctgaccaaggccaagagcgaggg 444
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggcgattggaagcaaaattgttgaggcggagatggacctgaccaaggccaagagcgaggg 380
Query: 445 gtacctgtgggggaacaggactgcagctgtggactccgacaagaagcagcagcttcttgc 504
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 381 gtacctgtgggggaacaggactgcagctgtcgattccgacaagaagcagcagcttcttgc 440
Query: 505 cgtcattggagtttacactgggtttggctcccgtctcaagagga 548
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cgtcattggagtttacactgggtttggctcccgtctcaagagga 484
>gb|BG241535.1|BG241535 RHIZ2_50_F09.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 599
Score = 722 bits (364), Expect = 0.0
Identities = 495/537 (92%), Gaps = 10/537 (1%)
Strand = Plus / Plus
Query: 770 gctgcagttgaagcctgggatgcagaattttatgtcaaagttgaagataacattaatctt 829
|||||||||||| |||||||||||||||| ||||||||||| || |||||||||||||||
Sbjct: 1 gctgcagttgaaacctgggatgcagaattctatgtcaaagtcgaggataacattaatctt 60
Query: 830 gacttagctgggttaattgagatgctcgaaggccgtcgaggtagccaaggattgtacatg 889
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gacttagctgggttaatcgagatgctcgaaggccgtcgaggtagccaaggattgtacatg 120
Query: 890 ggttgtatgaaatcagggatggtcataagtgaagagggccaacaatggtatgaacctgag 949
|||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||
Sbjct: 121 ggttgtatgaaatcaggggttgtcataagtgaagaggggcaacaatggtatgaacctgac 180
Query: 950 tggtggaaatttggagattcaaaaacgtattttcgacacgcttctggttctttgtttatc 1009
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 181 tggtggaaatttggagattcaaaaacgtattttcgacatgcttctggttctttgtttatc 240
Query: 1010 ctctcaaaaaatttggctcgctacatcaacataaatagtgcgtcactgcagagttatgca 1069
||||||||||||||||| ||||||||||||||||||||||| || || ||||||||||||
Sbjct: 241 ctctcaaaaaatttggcacgctacatcaacataaatagtgcatcgctccagagttatgca 300
Query: 1070 cacgatgatatatcagtaggttcatggatgatgggactgaatgcaacttacgtggatgat 1129
||||| || |||||||| || |||||||||||||||||||||||||||||||| || |||
Sbjct: 301 cacgacgacatatcagtggggtcatggatgatgggactgaatgcaacttacgtcgacgat 360
Query: 1130 gaccggttgtgctgcagcagttccagacaagagaaaatctgttccaatgct-----tgag 1184
|||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||
Sbjct: 361 gaccggttgtgctgcagcagttccagacaagagaaagtctgttctaatgcttgaggtgag 420
Query: 1185 cggaaggcgtggctgctggcctgttgctgtacatcctgatgaagattttgcacacctgtc 1244
||||||||||| ||||||| ||||| ||| |||||||||||||||||||| ||| |||||
Sbjct: 421 cggaaggcgtgactgctggtctgttactgcacatcctgatgaagattttgtacatctgtc 480
Query: 1245 attttgtatac----actgctttcgtgaaccgg-aaaaggctactatccagatagaa 1296
||||||||||| |||||||| ||||| ||| ||||||||||||| ||||||||
Sbjct: 481 attttgtatacatagactgcttttgtgaatcggaaaaaggctactatttagatagaa 537
>gb|BG241742.1|BG241742 RHIZ2_50_F09.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 444
Score = 718 bits (362), Expect = 0.0
Identities = 421/440 (95%), Gaps = 3/440 (0%)
Strand = Plus / Plus
Query: 102 cgtcggagatctccgccgc---catggagacgctggccagcgccatgcggcgcgagaacc 158
|||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||
Sbjct: 5 cgtcggagatctccgcagcagccatggagtcgctggccagcgccatgcggcgcgagaacc 64
Query: 159 gccggtccaaggccccgccctcctcctctgcttcctccgccctcgcctcgggcagggtcc 218
||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 65 gccggtccaaggccccgtcctcctcctccgctgcctccgccctcgcctcgggcagggtcc 124
Query: 219 ctctcgtcatggccttcctctcctgcctcgcctggctctacgtcgccggccgtttgtggc 278
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 125 ctctcgtcatggccttcctctcctgcctcgcctggctctacgtcgccggccggttgtggc 184
Query: 279 aggacgcgcagacccgggcgatcctgtccggcctcctcgagaagagctctaccagcgtcc 338
||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||
Sbjct: 185 aggacgcgcagacccgggcgatcctctccggcctcctcgagaagagttctggcagcgtcc 244
Query: 339 cgaaggtgctctcggtggaggacaagcttaggaaccttgggtgcaaggcgattggaagga 398
||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |
Sbjct: 245 cgaaggtgctctcggtggaggacaagcttaggaacctcggatgcaaggcgattggaagca 304
Query: 399 aaattgttgaggcggagatggacctgaccaaggccaagagcgaggggtacctgtggggga 458
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 aaattgttgaggcagagatggacctgaccaaggccaagagcgaggggtacctgtggggga 364
Query: 459 acaggactgcagctgtggactccgacaagaagcagcagcttcttgccgtcattggagttt 518
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 acaggactgcagctgtcgactccgacaagaagcagcagcttcttgccgtcattggagttt 424
Query: 519 acactgggtttggctcccgt 538
||||||||||||| ||||||
Sbjct: 425 acactgggtttggttcccgt 444
>gb|CF429032.1|CF429032 PH1_19_C09.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_19_C09_A002 3', mRNA sequence
Length = 582
Score = 652 bits (329), Expect = 0.0
Identities = 463/506 (91%), Gaps = 10/506 (1%)
Strand = Plus / Plus
Query: 801 atgtcaaagttgaagataacattaatcttgacttagctgggttaattgagatgctcgaag 860
||||||||||||| |||||||||||||||| ||||| ||||||||| |||||||| ||||
Sbjct: 1 atgtcaaagttgaggataacattaatcttgccttagttgggttaatcgagatgcttgaag 60
Query: 861 gccgtcgaggtagccaaggattgtacatgggttgtatgaaatcagggatggtcataagtg 920
||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||
Sbjct: 61 gccgtcgaggtagccaaggattgtatatgggttgtatgaaatcaggggttgtcataagtg 120
Query: 921 aagagggccaacaatggtatgaacctgagtggtggaaatttggagattcaaaaacgtatt 980
||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 121 aagagggtcaacaatggtatgaacctgactggtggaaatttgtagattcaaaaacgtatt 180
Query: 981 ttcgacacgcttctggttctttgtttatcctctcaaaaaatttggctcgctacatcaaca 1040
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttcgacatgcttctggttctttgtttatcctctcaaaaaatttggctcgctacatcaaca 240
Query: 1041 taaatagtgcgtcactgcagagttatgcacacgatgatatatcagtaggttcatggatga 1100
|||||||||| || || ||||||||||| ||||| || ||||||||||||||||||||||
Sbjct: 241 taaatagtgcatcgctccagagttatgctcacgaggacatatcagtaggttcatggatga 300
Query: 1101 tgggactgaatgcaacttacgtggatgatgaccggttgtgctgcagcagttccagacaag 1160
|||| ||||||||||||||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 301 tggggctgaatgcaacttacgtcgacgatgaccggttgtgctgcagcagctccagacaag 360
Query: 1161 agaaaatctgttccaatgcttgag-----cggaaggcgtggctgctggcctgttgctgta 1215
||||| |||||| |||||||||| ||||||||||| ||| ||||||||||||| |
Sbjct: 361 agaaagtctgttataatgcttgaggtgagcggaaggcgtgactgttggcctgttgctgca 420
Query: 1216 catcctgatgaagattttgcacacctgtcattttgtatacac----tgctttcgtgaacc 1271
||||||||||||||||||| ||| ||||||||||||||||| |||||| ||||| |
Sbjct: 421 catcctgatgaagattttgtacatctgtcattttgtatacatagaatgcttttgtgaatc 480
Query: 1272 ggaaaa-ggctactatccagatagaa 1296
|||||| |||||||||||||||||||
Sbjct: 481 ggaaaaaggctactatccagatagaa 506
>gb|CW282502.1|CW282502 104_758_11408743_148_35469_022 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11408743, DNA
sequence
Length = 700
Score = 349 bits (176), Expect = 4e-094
Identities = 191/196 (97%)
Strand = Plus / Plus
Query: 385 ggcgattggaaggaaaattgttgaggcggagatggacctgaccaaggccaagagcgaggg 444
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 ggcgattggaagcaaaattgttgaggcggagatggacctgaccaaggccaagagcgaggg 237
Query: 445 gtacctgtgggggaacaggactgcagctgtggactccgacaagaagcagcagcttcttgc 504
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 238 gtacctgtgggggaacaggactgcagctgtcgattccgacaagaagcagcagcttcttgc 297
Query: 505 cgtcattggagtttacactgggtttggctcccgtctcaagaggaacgtcttccgtggctc 564
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 298 cgtcattggagtttacactgggtttggctcccgtctcaagaggaatgtcttccgtggctc 357
Query: 565 ctggatgccaagaggt 580
||||||||| ||||||
Sbjct: 358 ctggatgccgagaggt 373
Score = 117 bits (59), Expect = 3e-024
Identities = 62/63 (98%)
Strand = Plus / Plus
Query: 577 aggtgatgctctgaagaagcttgaggaaaagggtgtagctattcgttttgttattggtcg 636
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 594 aggtgatgctctgaagaagcttgaggaaaagggtgtagttattcgttttgttattggtcg 653
Query: 637 gag 639
|||
Sbjct: 654 gag 656
Score = 85.7 bits (43), Expect = 1e-014
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 335 gtcccgaaggtgctctcggtggaggacaagcttaggaaccttgggtgcaag 385
||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 46 gtcccgaaggtgctctcggtggaggacaagcttaggaacctcggatgcaag 96
>gb|CF429134.1|CF429134 PH1_19_C09.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_19_C09_A002 5', mRNA sequence
Length = 258
Score = 329 bits (166), Expect = 4e-088
Identities = 222/240 (92%), Gaps = 3/240 (1%)
Strand = Plus / Plus
Query: 88 cgccgagagcccagcgtcggagatctccgccgc---catggagacgctggccagcgccat 144
||||||||| |||||||||||||||||| |||| ||||||| ||||||||| ||||||
Sbjct: 8 cgccgagagtccagcgtcggagatctcctccgcagccatggagtcgctggccaacgccat 67
Query: 145 gcggcgcgagaaccgccggtccaaggccccgccctcctcctctgcttcctccgccctcgc 204
||| ||||||||||||| ||||||||||||| |||||||||| || ||||| |||||||
Sbjct: 68 gcgtcgcgagaaccgccagtccaaggccccgtcctcctcctccgccgcctccaccctcgc 127
Query: 205 ctcgggcagggtccctctcgtcatggccttcctctcctgcctcgcctggctctacgtcgc 264
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 128 ctcgggcagggtccctctcgtcatggctttcctctcctgcctcgcctggctctacgtcgc 187
Query: 265 cggccgtttgtggcaggacgcgcagacccgggcgatcctgtccggcctcctcgagaagag 324
|||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 188 cggccggttgtggcacgacgcgcagacccgggcgatcctctccggcctcctcgagaagag 247
>gb|BE356519.1|BE356519 DG1_125_E05.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 680
Score = 285 bits (144), Expect = 5e-075
Identities = 224/249 (89%), Gaps = 10/249 (4%)
Strand = Plus / Plus
Query: 1058 cagagttatgcacacgatgatatatcagtaggttcatggatgatgggactgaatgcaact 1117
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 370 cagagttatgcacacgacgacatatcagtaggttcatggatgatgggactgaatgcaact 429
Query: 1118 tacgtggatgatgaccggttgtgctgcagcagttccagacaagagaaaatctgttccaat 1177
||||| || ||||||||||||||||||||||| ||||||||||||||| ||||||| |||
Sbjct: 430 tacgtcgacgatgaccggttgtgctgcagcagctccagacaagagaaagtctgttctaat 489
Query: 1178 gcttgag-----cggaaggcgtggctgctggcctgttgctgtacatcctgatgaagattt 1232
||||||| ||||||||||| ||| ||||||||||||| ||||||||||||||||||
Sbjct: 490 gcttgaggtgagcggaaggcgtgactgttggcctgttgctgcacatcctgatgaagattt 549
Query: 1233 tgcacacctgtcattttgtatacac----tgctttcgtgaaccggaaaa-ggctactatc 1287
|| ||| ||||||||||||||||| |||||| ||||| ||||||| ||||||||||
Sbjct: 550 tgtacatctgtcattttgtatacatagaatgcttttgtgaatcggaaaaaggctactatc 609
Query: 1288 cagatagaa 1296
|||||||||
Sbjct: 610 cagatagaa 618
>gb|CL176358.1|CL176358 104_382_10893074_116_31763_290 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10893074, DNA
sequence
Length = 712
Score = 274 bits (138), Expect = 2e-071
Identities = 214/238 (89%), Gaps = 11/238 (4%)
Strand = Plus / Plus
Query: 43 gtcctccctttccgtttaaggcagcaagcaggagcagacaggaggcgccg-------aga 95
||||| |||||||||| | |||||||||||| |||||||||||||||||| |||
Sbjct: 316 gtccttcctttccgttaacggcagcaagcag-agcagacaggaggcgccgcccgccgaga 374
Query: 96 gcccagcgtcggagatctccgccgc---catggagacgctggccagcgccatgcggcgcg 152
| |||||||||||||||||| |||| ||||||| ||||||||||||||||||| ||||
Sbjct: 375 gtccagcgtcggagatctcctccgcagccatggagtcgctggccagcgccatgcgtcgcg 434
Query: 153 agaaccgccggtccaaggccccgccctcctcctctgcttcctccgccctcgcctcgggca 212
||||||||||||||||||||||| |||||||||| || ||||| |||||||||||||||
Sbjct: 435 agaaccgccggtccaaggccccgtcctcctcctccgccgcctccaccctcgcctcgggca 494
Query: 213 gggtccctctcgtcatggccttcctctcctgcctcgcctggctctacgtcgccggccg 270
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 495 gggtccctctcgtcatggctttcctctcctgcctcgcctggctctacgtcgccggccg 552
Score = 97.6 bits (49), Expect = 3e-018
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 272 ttgtggcaggacgcgcagacccgggcgatcctgtccggcctcctcgagaagag 324
|||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 641 ttgtggcaggacgcgcagacccgggcgatcctctccggcctcctcgagaagag 693
>gb|CW132322.1|CW132322 104_515_11116148_116_34797_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11116148, DNA
sequence
Length = 588
Score = 274 bits (138), Expect = 2e-071
Identities = 214/238 (89%), Gaps = 11/238 (4%)
Strand = Plus / Minus
Query: 43 gtcctccctttccgtttaaggcagcaagcaggagcagacaggaggcgccg-------aga 95
||||| |||||||||| | |||||||||||| |||||||||||||||||| |||
Sbjct: 518 gtccttcctttccgttaacggcagcaagcag-agcagacaggaggcgccgcccgccgaga 460
Query: 96 gcccagcgtcggagatctccgccgc---catggagacgctggccagcgccatgcggcgcg 152
| |||||||||||||||||| |||| ||||||| ||||||||||||||||||| ||||
Sbjct: 459 gtccagcgtcggagatctcctccgcagccatggagtcgctggccagcgccatgcgtcgcg 400
Query: 153 agaaccgccggtccaaggccccgccctcctcctctgcttcctccgccctcgcctcgggca 212
||||||||||||||||||||||| |||||||||| || ||||| |||||||||||||||
Sbjct: 399 agaaccgccggtccaaggccccgtcctcctcctccgccgcctccaccctcgcctcgggca 340
Query: 213 gggtccctctcgtcatggccttcctctcctgcctcgcctggctctacgtcgccggccg 270
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gggtccctctcgtcatggctttcctctcctgcctcgcctggctctacgtcgccggccg 282
Score = 97.6 bits (49), Expect = 3e-018
Identities = 52/53 (98%)
Strand = Plus / Minus
Query: 272 ttgtggcaggacgcgcagacccgggcgatcctgtccggcctcctcgagaagag 324
|||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 193 ttgtggcaggacgcgcagacccgggcgatcctctccggcctcctcgagaagag 141
Score = 81.8 bits (41), Expect = 2e-013
Identities = 41/41 (100%)
Strand = Plus / Minus
Query: 335 gtcccgaaggtgctctcggtggaggacaagcttaggaacct 375
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 44 gtcccgaaggtgctctcggtggaggacaagcttaggaacct 4
>gb|CW142262.1|CW142262 104_533_11136761_116_34938_071 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11136761, DNA
sequence
Length = 580
Score = 274 bits (138), Expect = 2e-071
Identities = 214/238 (89%), Gaps = 11/238 (4%)
Strand = Plus / Plus
Query: 43 gtcctccctttccgtttaaggcagcaagcaggagcagacaggaggcgccg-------aga 95
||||| |||||||||| | |||||||||||| |||||||||||||||||| |||
Sbjct: 179 gtccttcctttccgttaacggcagcaagcag-agcagacaggaggcgccgcccgccgaga 237
Query: 96 gcccagcgtcggagatctccgccgc---catggagacgctggccagcgccatgcggcgcg 152
| |||||||||||||||||| |||| ||||||| ||||||||||||||||||| ||||
Sbjct: 238 gtccagcgtcggagatctcctccgcagccatggagtcgctggccagcgccatgcgtcgcg 297
Query: 153 agaaccgccggtccaaggccccgccctcctcctctgcttcctccgccctcgcctcgggca 212
||||||||||||||||||||||| |||||||||| || ||||| |||||||||||||||
Sbjct: 298 agaaccgccggtccaaggccccgtcctcctcctccgccgcctccaccctcgcctcgggca 357
Query: 213 gggtccctctcgtcatggccttcctctcctgcctcgcctggctctacgtcgccggccg 270
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gggtccctctcgtcatggctttcctctcctgcctcgcctggctctacgtcgccggccg 415
Score = 97.6 bits (49), Expect = 3e-018
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 272 ttgtggcaggacgcgcagacccgggcgatcctgtccggcctcctcgagaagag 324
|||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 504 ttgtggcaggacgcgcagacccgggcgatcctctccggcctcctcgagaagag 556
>gb|CW142263.1|CW142263 104_533_11136761_148_34942_071 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11136761, DNA
sequence
Length = 682
Score = 274 bits (138), Expect = 2e-071
Identities = 214/238 (89%), Gaps = 11/238 (4%)
Strand = Plus / Minus
Query: 43 gtcctccctttccgtttaaggcagcaagcaggagcagacaggaggcgccg-------aga 95
||||| |||||||||| | |||||||||||| |||||||||||||||||| |||
Sbjct: 524 gtccttcctttccgttaacggcagcaagcag-agcagacaggaggcgccgcccgccgaga 466
Query: 96 gcccagcgtcggagatctccgccgc---catggagacgctggccagcgccatgcggcgcg 152
| |||||||||||||||||| |||| ||||||| ||||||||||||||||||| ||||
Sbjct: 465 gtccagcgtcggagatctcctccgcagccatggagtcgctggccagcgccatgcgtcgcg 406
Query: 153 agaaccgccggtccaaggccccgccctcctcctctgcttcctccgccctcgcctcgggca 212
||||||||||||||||||||||| |||||||||| || ||||| |||||||||||||||
Sbjct: 405 agaaccgccggtccaaggccccgtcctcctcctccgccgcctccaccctcgcctcgggca 346
Query: 213 gggtccctctcgtcatggccttcctctcctgcctcgcctggctctacgtcgccggccg 270
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gggtccctctcgtcatggctttcctctcctgcctcgcctggctctacgtcgccggccg 288
Score = 97.6 bits (49), Expect = 3e-018
Identities = 52/53 (98%)
Strand = Plus / Minus
Query: 272 ttgtggcaggacgcgcagacccgggcgatcctgtccggcctcctcgagaagag 324
|||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 199 ttgtggcaggacgcgcagacccgggcgatcctctccggcctcctcgagaagag 147
Score = 83.8 bits (42), Expect = 4e-014
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 335 gtcccgaaggtgctctcggtggaggacaagcttaggaaccttgggtgcaa 384
||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 50 gtcccgaaggtgctctcggtggaggacaagcttaggaacctcggatgcaa 1
>gb|CW315578.1|CW315578 104_806_11472438_116_35824_019 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11472438, DNA
sequence
Length = 636
Score = 274 bits (138), Expect = 2e-071
Identities = 214/238 (89%), Gaps = 11/238 (4%)
Strand = Plus / Plus
Query: 43 gtcctccctttccgtttaaggcagcaagcaggagcagacaggaggcgccg-------aga 95
||||| |||||||||| | |||||||||||| |||||||||||||||||| |||
Sbjct: 315 gtccttcctttccgttaacggcagcaagcag-agcagacaggaggcgccgcccgccgaga 373
Query: 96 gcccagcgtcggagatctccgccgc---catggagacgctggccagcgccatgcggcgcg 152
| |||||||||||||||||| |||| ||||||| ||||||||||||||||||| ||||
Sbjct: 374 gtccagcgtcggagatctcctccgcagccatggagtcgctggccagcgccatgcgtcgcg 433
Query: 153 agaaccgccggtccaaggccccgccctcctcctctgcttcctccgccctcgcctcgggca 212
||||||||||||||||||||||| |||||||||| || ||||| |||||||||||||||
Sbjct: 434 agaaccgccggtccaaggccccgtcctcctcctccgccgcctccaccctcgcctcgggca 493
Query: 213 gggtccctctcgtcatggccttcctctcctgcctcgcctggctctacgtcgccggccg 270
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 494 gggtccctctcgtcatggctttcctctcctgcctcgcctggctctacgtcgccggccg 551
>gb|CW334306.1|CW334306 104_832_11482429_116_36054_051 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11482429, DNA
sequence
Length = 635
Score = 274 bits (138), Expect = 2e-071
Identities = 214/238 (89%), Gaps = 11/238 (4%)
Strand = Plus / Plus
Query: 43 gtcctccctttccgtttaaggcagcaagcaggagcagacaggaggcgccg-------aga 95
||||| |||||||||| | |||||||||||| |||||||||||||||||| |||
Sbjct: 140 gtccttcctttccgttaacggcagcaagcag-agcagacaggaggcgccgcccgccgaga 198
Query: 96 gcccagcgtcggagatctccgccgc---catggagacgctggccagcgccatgcggcgcg 152
| |||||||||||||||||| |||| ||||||| ||||||||||||||||||| ||||
Sbjct: 199 gtccagcgtcggagatctcctccgcagccatggagtcgctggccagcgccatgcgtcgcg 258
Query: 153 agaaccgccggtccaaggccccgccctcctcctctgcttcctccgccctcgcctcgggca 212
||||||||||||||||||||||| |||||||||| || ||||| |||||||||||||||
Sbjct: 259 agaaccgccggtccaaggccccgtcctcctcctccgccgcctccaccctcgcctcgggca 318
Query: 213 gggtccctctcgtcatggccttcctctcctgcctcgcctggctctacgtcgccggccg 270
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gggtccctctcgtcatggctttcctctcctgcctcgcctggctctacgtcgccggccg 376
Score = 97.6 bits (49), Expect = 3e-018
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 272 ttgtggcaggacgcgcagacccgggcgatcctgtccggcctcctcgagaagag 324
|||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 465 ttgtggcaggacgcgcagacccgggcgatcctctccggcctcctcgagaagag 517
Score = 44.1 bits (22), Expect = 0.034
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 335 gtcccgaaggtgctctcggtgg 356
||||||||||||||||||||||
Sbjct: 614 gtcccgaaggtgctctcggtgg 635
>gb|CW334307.1|CW334307 104_832_11482429_148_36053_051 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11482429, DNA
sequence
Length = 627
Score = 270 bits (136), Expect = 3e-070
Identities = 209/232 (90%), Gaps = 11/232 (4%)
Strand = Plus / Minus
Query: 49 cctttccgtttaaggcagcaagcaggagcagacaggaggcgccg-------agagcccag 101
|||||||||| | |||||||||||| |||||||||||||||||| |||| ||||
Sbjct: 617 cctttccgttaacggcagcaagcag-agcagacaggaggcgccgcccgccgagagtccag 559
Query: 102 cgtcggagatctccgccgc---catggagacgctggccagcgccatgcggcgcgagaacc 158
|||||||||||||| |||| ||||||| ||||||||||||||||||| ||||||||||
Sbjct: 558 cgtcggagatctcctccgcagccatggagtcgctggccagcgccatgcgtcgcgagaacc 499
Query: 159 gccggtccaaggccccgccctcctcctctgcttcctccgccctcgcctcgggcagggtcc 218
||||||||||||||||| |||||||||| || ||||| |||||||||||||||||||||
Sbjct: 498 gccggtccaaggccccgtcctcctcctccgccgcctccaccctcgcctcgggcagggtcc 439
Query: 219 ctctcgtcatggccttcctctcctgcctcgcctggctctacgtcgccggccg 270
||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ctctcgtcatggctttcctctcctgcctcgcctggctctacgtcgccggccg 387
Score = 97.6 bits (49), Expect = 3e-018
Identities = 52/53 (98%)
Strand = Plus / Minus
Query: 272 ttgtggcaggacgcgcagacccgggcgatcctgtccggcctcctcgagaagag 324
|||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 298 ttgtggcaggacgcgcagacccgggcgatcctctccggcctcctcgagaagag 246
Score = 85.7 bits (43), Expect = 1e-014
Identities = 49/51 (96%)
Strand = Plus / Minus
Query: 335 gtcccgaaggtgctctcggtggaggacaagcttaggaaccttgggtgcaag 385
||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 149 gtcccgaaggtgctctcggtggaggacaagcttaggaacctcggatgcaag 99
>gb|CW059428.1|CW059428 104_302_10519312_114_30165 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10519312, DNA
sequence
Length = 658
Score = 268 bits (135), Expect = 1e-069
Identities = 180/195 (92%)
Strand = Plus / Minus
Query: 386 gcgattggaaggaaaattgttgaggcggagatggacctgaccaaggccaagagcgagggg 445
||||||||| ||||| ||||||||||||||||||||||| ||| |||||||| ||||||
Sbjct: 594 gcgattggagggaaagttgttgaggcggagatggacctggccagggccaagactgagggg 535
Query: 446 tacctgtgggggaacaggactgcagctgtggactccgacaagaagcagcagcttcttgcc 505
|||||||||| |||||||||||||||||| ||||||| |||||||||| ||||||||||
Sbjct: 534 tacctgtgggagaacaggactgcagctgtcgactccggcaagaagcagaagcttcttgct 475
Query: 506 gtcattggagtttacactgggtttggctcccgtctcaagaggaacgtcttccgtggctcc 565
|||||||| |||||||||||||||||||| | || |||||||||||||||||||||||||
Sbjct: 474 gtcattggtgtttacactgggtttggctctcatcgcaagaggaacgtcttccgtggctcc 415
Query: 566 tggatgccaagaggt 580
|||||||||||||||
Sbjct: 414 tggatgccaagaggt 400
Score = 109 bits (55), Expect = 7e-022
Identities = 58/59 (98%)
Strand = Plus / Minus
Query: 581 gatgctctgaagaagcttgaggaaaagggtgtagctattcgttttgttattggtcggag 639
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 128 gatgctctgaagaagcttgaggaaaagggtgtagttattcgttttgttattggtcggag 70
>gb|CW123090.1|CW123090 104_502_11111025_148_34685_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11111025, DNA
sequence
Length = 664
Score = 268 bits (135), Expect = 1e-069
Identities = 180/195 (92%)
Strand = Plus / Plus
Query: 386 gcgattggaaggaaaattgttgaggcggagatggacctgaccaaggccaagagcgagggg 445
||||||||| ||||| ||||||||||||||||||||||| ||| |||||||| ||||||
Sbjct: 203 gcgattggagggaaagttgttgaggcggagatggacctggccagggccaagactgagggg 262
Query: 446 tacctgtgggggaacaggactgcagctgtggactccgacaagaagcagcagcttcttgcc 505
|||||||||| |||||||||||||||||| ||||||| |||||||||| ||||||||||
Sbjct: 263 tacctgtgggagaacaggactgcagctgtcgactccggcaagaagcagaagcttcttgct 322
Query: 506 gtcattggagtttacactgggtttggctcccgtctcaagaggaacgtcttccgtggctcc 565
|||||||| |||||||||||||||||||| | || |||||||||||||||||||||||||
Sbjct: 323 gtcattggtgtttacactgggtttggctctcatcgcaagaggaacgtcttccgtggctcc 382
Query: 566 tggatgccaagaggt 580
|||||||||||||||
Sbjct: 383 tggatgccaagaggt 397
Score = 60.0 bits (30), Expect = 6e-007
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 339 cgaaggtgctctcggtggaggacaagctta 368
||||||||||||||||||||||||||||||
Sbjct: 65 cgaaggtgctctcggtggaggacaagctta 94
>gb|CW187409.1|CW187409 104_605_11167076_148_36715_068 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11167076, DNA
sequence
Length = 685
Score = 268 bits (135), Expect = 1e-069
Identities = 180/195 (92%)
Strand = Plus / Minus
Query: 386 gcgattggaaggaaaattgttgaggcggagatggacctgaccaaggccaagagcgagggg 445
||||||||| ||||| ||||||||||||||||||||||| ||| |||||||| ||||||
Sbjct: 535 gcgattggagggaaagttgttgaggcggagatggacctggccagggccaagactgagggg 476
Query: 446 tacctgtgggggaacaggactgcagctgtggactccgacaagaagcagcagcttcttgcc 505
|||||||||| |||||||||||||||||| ||||||| |||||||||| ||||||||||
Sbjct: 475 tacctgtgggagaacaggactgcagctgtcgactccggcaagaagcagaagcttcttgct 416
Query: 506 gtcattggagtttacactgggtttggctcccgtctcaagaggaacgtcttccgtggctcc 565
|||||||| |||||||||||||||||||| | || |||||||||||||||||||||||||
Sbjct: 415 gtcattggtgtttacactgggtttggctctcatcgcaagaggaacgtcttccgtggctcc 356
Query: 566 tggatgccaagaggt 580
|||||||||||||||
Sbjct: 355 tggatgccaagaggt 341
Score = 109 bits (55), Expect = 7e-022
Identities = 58/59 (98%)
Strand = Plus / Minus
Query: 581 gatgctctgaagaagcttgaggaaaagggtgtagctattcgttttgttattggtcggag 639
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 69 gatgctctgaagaagcttgaggaaaagggtgtagttattcgttttgttattggtcggag 11
Score = 60.0 bits (30), Expect = 6e-007
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 339 cgaaggtgctctcggtggaggacaagctta 368
||||||||||||||||||||||||||||||
Sbjct: 673 cgaaggtgctctcggtggaggacaagctta 644
>gb|CW190842.1|CW190842 104_612_11174724_116_36760_038 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11174724, DNA
sequence
Length = 585
Score = 268 bits (135), Expect = 1e-069
Identities = 180/195 (92%)
Strand = Plus / Minus
Query: 386 gcgattggaaggaaaattgttgaggcggagatggacctgaccaaggccaagagcgagggg 445
||||||||| ||||| ||||||||||||||||||||||| ||| |||||||| ||||||
Sbjct: 327 gcgattggagggaaagttgttgaggcggagatggacctggccagggccaagactgagggg 268
Query: 446 tacctgtgggggaacaggactgcagctgtggactccgacaagaagcagcagcttcttgcc 505
|||||||||| |||||||||||||||||| ||||||| |||||||||| ||||||||||
Sbjct: 267 tacctgtgggagaacaggactgcagctgtcgactccggcaagaagcagaagcttcttgct 208
Query: 506 gtcattggagtttacactgggtttggctcccgtctcaagaggaacgtcttccgtggctcc 565
|||||||| |||||||||||||||||||| | || |||||||||||||||||||||||||
Sbjct: 207 gtcattggtgtttacactgggtttggctctcatcgcaagaggaacgtcttccgtggctcc 148
Query: 566 tggatgccaagaggt 580
|||||||||||||||
Sbjct: 147 tggatgccaagaggt 133
Score = 60.0 bits (30), Expect = 6e-007
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 339 cgaaggtgctctcggtggaggacaagctta 368
||||||||||||||||||||||||||||||
Sbjct: 465 cgaaggtgctctcggtggaggacaagctta 436
>gb|CW205739.1|CW205739 104_634_11187225_116_36951_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11187225, DNA
sequence
Length = 657
Score = 268 bits (135), Expect = 1e-069
Identities = 180/195 (92%)
Strand = Plus / Minus
Query: 386 gcgattggaaggaaaattgttgaggcggagatggacctgaccaaggccaagagcgagggg 445
||||||||| ||||| ||||||||||||||||||||||| ||| |||||||| ||||||
Sbjct: 557 gcgattggagggaaagttgttgaggcggagatggacctggccagggccaagactgagggg 498
Query: 446 tacctgtgggggaacaggactgcagctgtggactccgacaagaagcagcagcttcttgcc 505
|||||||||| |||||||||||||||||| ||||||| |||||||||| ||||||||||
Sbjct: 497 tacctgtgggagaacaggactgcagctgtcgactccggcaagaagcagaagcttcttgct 438
Query: 506 gtcattggagtttacactgggtttggctcccgtctcaagaggaacgtcttccgtggctcc 565
|||||||| |||||||||||||||||||| | || |||||||||||||||||||||||||
Sbjct: 437 gtcattggtgtttacactgggtttggctctcatcgcaagaggaacgtcttccgtggctcc 378
Query: 566 tggatgccaagaggt 580
|||||||||||||||
Sbjct: 377 tggatgccaagaggt 363
Score = 109 bits (55), Expect = 7e-022
Identities = 58/59 (98%)
Strand = Plus / Minus
Query: 581 gatgctctgaagaagcttgaggaaaagggtgtagctattcgttttgttattggtcggag 639
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 91 gatgctctgaagaagcttgaggaaaagggtgtagttattcgttttgttattggtcggag 33
>gb|CW209356.1|CW209356 104_639_11189196_148_36987_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11189196, DNA
sequence
Length = 725
Score = 268 bits (135), Expect = 1e-069
Identities = 180/195 (92%)
Strand = Plus / Plus
Query: 386 gcgattggaaggaaaattgttgaggcggagatggacctgaccaaggccaagagcgagggg 445
||||||||| ||||| ||||||||||||||||||||||| ||| |||||||| ||||||
Sbjct: 155 gcgattggagggaaagttgttgaggcggagatggacctggccagggccaagactgagggg 214
Query: 446 tacctgtgggggaacaggactgcagctgtggactccgacaagaagcagcagcttcttgcc 505
|||||||||| |||||||||||||||||| ||||||| |||||||||| ||||||||||
Sbjct: 215 tacctgtgggagaacaggactgcagctgtcgactccggcaagaagcagaagcttcttgct 274
Query: 506 gtcattggagtttacactgggtttggctcccgtctcaagaggaacgtcttccgtggctcc 565
|||||||| |||||||||||||||||||| | || |||||||||||||||||||||||||
Sbjct: 275 gtcattggtgtttacactgggtttggctctcatcgcaagaggaacgtcttccgtggctcc 334
Query: 566 tggatgccaagaggt 580
|||||||||||||||
Sbjct: 335 tggatgccaagaggt 349
Score = 109 bits (55), Expect = 7e-022
Identities = 58/59 (98%)
Strand = Plus / Plus
Query: 581 gatgctctgaagaagcttgaggaaaagggtgtagctattcgttttgttattggtcggag 639
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 621 gatgctctgaagaagcttgaggaaaagggtgtagttattcgttttgttattggtcggag 679
Score = 60.0 bits (30), Expect = 6e-007
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 339 cgaaggtgctctcggtggaggacaagctta 368
||||||||||||||||||||||||||||||
Sbjct: 17 cgaaggtgctctcggtggaggacaagctta 46
>gb|CL176359.1|CL176359 104_382_10893074_148_31762_290 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10893074, DNA
sequence
Length = 712
Score = 262 bits (132), Expect = 8e-068
Identities = 173/186 (93%), Gaps = 3/186 (1%)
Strand = Plus / Minus
Query: 88 cgccgagagcccagcgtcggagatctccgccgc---catggagacgctggccagcgccat 144
||||||||| |||||||||||||||||| |||| ||||||| ||||||||||||||||
Sbjct: 685 cgccgagagtccagcgtcggagatctcctccgcagccatggagtcgctggccagcgccat 626
Query: 145 gcggcgcgagaaccgccggtccaaggccccgccctcctcctctgcttcctccgccctcgc 204
||| ||||||||||||||||||||||||||| |||||||||| || ||||| |||||||
Sbjct: 625 gcgtcgcgagaaccgccggtccaaggccccgtcctcctcctccgccgcctccaccctcgc 566
Query: 205 ctcgggcagggtccctctcgtcatggccttcctctcctgcctcgcctggctctacgtcgc 264
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 565 ctcgggcagggtccctctcgtcatggctttcctctcctgcctcgcctggctctacgtcgc 506
Query: 265 cggccg 270
||||||
Sbjct: 505 cggccg 500
Score = 234 bits (118), Expect = 2e-059
Identities = 127/130 (97%)
Strand = Plus / Minus
Query: 385 ggcgattggaaggaaaattgttgaggcggagatggacctgaccaaggccaagagcgaggg 444
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 ggcgattggaagcaaaattgttgaggcggagatggacctgaccaaggccaagagcgaggg 71
Query: 445 gtacctgtgggggaacaggactgcagctgtggactccgacaagaagcagcagcttcttgc 504
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 70 gtacctgtgggggaacaggactgcagctgtcgattccgacaagaagcagcagcttcttgc 11
Query: 505 cgtcattgga 514
||||||||||
Sbjct: 10 cgtcattgga 1
Score = 97.6 bits (49), Expect = 3e-018
Identities = 52/53 (98%)
Strand = Plus / Minus
Query: 272 ttgtggcaggacgcgcagacccgggcgatcctgtccggcctcctcgagaagag 324
|||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 411 ttgtggcaggacgcgcagacccgggcgatcctctccggcctcctcgagaagag 359
Score = 85.7 bits (43), Expect = 1e-014
Identities = 49/51 (96%)
Strand = Plus / Minus
Query: 335 gtcccgaaggtgctctcggtggaggacaagcttaggaaccttgggtgcaag 385
||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 262 gtcccgaaggtgctctcggtggaggacaagcttaggaacctcggatgcaag 212
>gb|BG053579.1|BG053579 RHIZ2_11_A11.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 345
Score = 244 bits (123), Expect = 2e-062
Identities = 263/308 (85%), Gaps = 10/308 (3%)
Strand = Plus / Plus
Query: 989 gcttctggttctttgtttatcctctcaaaaaatttggctcgctacatcaacataaatagt 1048
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 gcttctggttctttgtttatcctctcaaaaaatttggcccgctacatcaacataaatagt 60
Query: 1049 gcgtcactgcagagttatgcacacgatgatatatcagtaggttcatggatgatgggactg 1108
|| || || ||||||||||| | ||| || | |||||| || ||||||||||||||||||
Sbjct: 61 gcatcgctccagagttatgcccccgacgacaaatcagtggggtcatggatgatgggactg 120
Query: 1109 aatgcaacttacgtggatgatgaccggttgtgctgcagcagttccagacaagagaaaatc 1168
|||||||||||||| || |||||||||||||||||||||||||||| |||| | ||| |
Sbjct: 121 aatgcaacttacgttgacgatgaccggttgtgctgcagcagttccaaacaaaaaaaagtt 180
Query: 1169 tgttccaatgct-----tgagcggaaggcgtggctgctggcctgttgctgtacatcctga 1223
|||| || ||| ||||||||||| ||| ||||||| |||| ||| ||||||||
Sbjct: 181 tgttttaaagctttaggtgagcggaaggggtgactgctggtttgttactgcccatcctga 240
Query: 1224 tgaagattttgcacacctgtcattttgtatac----actgctttcgtgaaccgg-aaaag 1278
||| |||||| ||| ||||||||||||| || |||||||| ||||| ||| |||||
Sbjct: 241 agaaaattttggacatctgtcattttgtaaacaaaaactgcttttgtgaatcggaaaaag 300
Query: 1279 gctactat 1286
||||||||
Sbjct: 301 gctactat 308
>gb|CW315579.1|CW315579 104_806_11472438_148_35828_019 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11472438, DNA
sequence
Length = 426
Score = 224 bits (113), Expect = 2e-056
Identities = 122/125 (97%)
Strand = Plus / Minus
Query: 385 ggcgattggaaggaaaattgttgaggcggagatggacctgaccaaggccaagagcgaggg 444
|||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 125 ggcgattggaagcaaaattgttgaggcggagatggacctgaccaagtccaagagcgaggg 66
Query: 445 gtacctgtgggggaacaggactgcagctgtggactccgacaagaagcagcagcttcttgc 504
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 65 gtacctgtgggggaacaggactgcagctgtggattccgacaagaagcagcagcttcttgc 6
Query: 505 cgtca 509
|||||
Sbjct: 5 cgtca 1
Score = 89.7 bits (45), Expect = 6e-016
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 272 ttgtggcaggacgcgcagacccgggcgatcctgtccggcctcctcgagaagag 324
|||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 406 ttgtggcaggacgcgcagacccgggcgatcctatccggcctccttgagaagag 354
Score = 85.7 bits (43), Expect = 1e-014
Identities = 49/51 (96%)
Strand = Plus / Minus
Query: 335 gtcccgaaggtgctctcggtggaggacaagcttaggaaccttgggtgcaag 385
||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 257 gtcccgaaggtgctctcggtggaggacaagcttaggaacctcggatgcaag 207
>gb|CW265341.1|CW265341 104_734_11231821_116_35257_053 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11231821, DNA
sequence
Length = 665
Score = 204 bits (103), Expect = 2e-050
Identities = 176/199 (88%), Gaps = 11/199 (5%)
Strand = Plus / Plus
Query: 43 gtcctccctttccgtttaaggcagcaagcaggagcagacaggaggcgccg-------aga 95
||||| |||||||||| | |||||||||||| |||||||||||||||||| |||
Sbjct: 468 gtccttcctttccgttaacggcagcaagcag-agcagacaggaggcgccgcccgccgaga 526
Query: 96 gcccagcgtcggagatctccgccgc---catggagacgctggccagcgccatgcggcgcg 152
| |||||||||||||||||| |||| ||||||| ||||||||||||||||||| ||||
Sbjct: 527 gtccagcgtcggagatctcctccgcagccatggagtcgctggccagcgccatgcgtcgcg 586
Query: 153 agaaccgccggtccaaggccccgccctcctcctctgcttcctccgccctcgcctcgggca 212
||||||||||||||||||||||| |||||||||| || ||||| |||||||||||||||
Sbjct: 587 agaaccgccggtccaaggccccgtcctcctcctccgccgcctccaccctcgcctcgggca 646
Query: 213 gggtccctctcgtcatggc 231
|||||||||||||||||||
Sbjct: 647 gggtccctctcgtcatggc 665
>gb|CW129612.1|CW129612 104_511_11114659_116_34764_068 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11114659, DNA
sequence
Length = 660
Score = 172 bits (87), Expect = 6e-041
Identities = 108/115 (93%)
Strand = Plus / Plus
Query: 1046 agtgcgtcactgcagagttatgcacacgatgatatatcagtaggttcatggatgatggga 1105
|||||||||||||||||||||||||| || || ||||||||||||||||||||||||||
Sbjct: 220 agtgcgtcactgcagagttatgcacatgacgacatatcagtaggttcatggatgatgggg 279
Query: 1106 ctgaatgcaacttacgtggatgatgaccggttgtgctgcagcagttccagacaag 1160
|||||||||||||||||||| || |||||||||||||| ||||||||||||||||
Sbjct: 280 ctgaatgcaacttacgtggacgacgaccggttgtgctgtagcagttccagacaag 334
>gb|CW334499.1|CW334499 104_833_11482534_116_36073_095 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11482534, DNA
sequence
Length = 638
Score = 172 bits (87), Expect = 6e-041
Identities = 108/115 (93%)
Strand = Plus / Minus
Query: 1046 agtgcgtcactgcagagttatgcacacgatgatatatcagtaggttcatggatgatggga 1105
|||||||||||||||||||||||||| || || ||||||||||||||||||||||||||
Sbjct: 316 agtgcgtcactgcagagttatgcacatgacgacatatcagtaggttcatggatgatgggg 257
Query: 1106 ctgaatgcaacttacgtggatgatgaccggttgtgctgcagcagttccagacaag 1160
|||||||||||||||||||| || |||||||||||||| ||||||||||||||||
Sbjct: 256 ctgaatgcaacttacgtggacgacgaccggttgtgctgtagcagttccagacaag 202
>gb|CW123089.1|CW123089 104_502_11111025_116_34689_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11111025, DNA
sequence
Length = 693
Score = 159 bits (80), Expect = 8e-037
Identities = 113/124 (91%)
Strand = Plus / Minus
Query: 713 gaaagtcatgaagaggctgcagaagaattaccgagcaaagcaaaaattttcttcagtgct 772
|||||||||||||||| | |||||||||||||||| |||||||| ||||||||||||||
Sbjct: 174 gaaagtcatgaagaggttacagaagaattaccgagtaaagcaaagtttttcttcagtgct 115
Query: 773 gcagttgaagcctgggatgcagaattttatgtcaaagttgaagataacattaatcttgac 832
||||| || ||||||| |||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 114 gcagtcgacacctgggaagcagaattctatgtcaaagttgaggataacattaatcttgac 55
Query: 833 ttag 836
||||
Sbjct: 54 ttag 51
Score = 127 bits (64), Expect = 3e-027
Identities = 73/76 (96%)
Strand = Plus / Minus
Query: 638 agtgcaaatcgaggtgatagcttggaccgtaatattgatgatgaaaatcggcagacaaag 697
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 425 agtgcaaatcgaggtgatagcttggaccgtaatattgacgatgaaaatcagcagacaaag 366
Query: 698 gacttcttgattcttg 713
||||||||| ||||||
Sbjct: 365 gacttcttgcttcttg 350
Score = 109 bits (55), Expect = 7e-022
Identities = 58/59 (98%)
Strand = Plus / Minus
Query: 581 gatgctctgaagaagcttgaggaaaagggtgtagctattcgttttgttattggtcggag 639
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 585 gatgctctgaagaagcttgaggaaaagggtgtagttattcgttttgttattggtcggag 527
>gb|CW282501.1|CW282501 104_758_11408743_116_35465_022 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11408743, DNA
sequence
Length = 655
Score = 159 bits (80), Expect = 8e-037
Identities = 95/100 (95%)
Strand = Plus / Minus
Query: 481 cgacaagaagcagcagcttcttgccgtcattggagtttacactgggtttggctcccgtct 540
||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct: 655 cgacaagaagcagcagcttctgcccgtcattggagtttacactgtgtttggctcccgtct 596
Query: 541 caagaggaacgtcttccgtggctcctggatgccaagaggt 580
||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 595 caagaggaatgtcttccgtggctcctggatgccgagaggt 556
Score = 143 bits (72), Expect = 5e-032
Identities = 75/76 (98%)
Strand = Plus / Minus
Query: 638 agtgcaaatcgaggtgatagcttggaccgtaatattgatgatgaaaatcggcagacaaag 697
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 119 agtgcaaatcgaggtgatagcttggaccgtaatattgacgatgaaaatcggcagacaaag 60
Query: 698 gacttcttgattcttg 713
||||||||||||||||
Sbjct: 59 gacttcttgattcttg 44
Score = 117 bits (59), Expect = 3e-024
Identities = 62/63 (98%)
Strand = Plus / Minus
Query: 577 aggtgatgctctgaagaagcttgaggaaaagggtgtagctattcgttttgttattggtcg 636
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 335 aggtgatgctctgaagaagcttgaggaaaagggtgtagttattcgttttgttattggtcg 276
Query: 637 gag 639
|||
Sbjct: 275 gag 273
>gb|BG050763.1|BG050763 FM1_70_C03.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 117
Score = 153 bits (77), Expect = 5e-035
Identities = 107/117 (91%)
Strand = Plus / Plus
Query: 380 tgcaaggcgattggaaggaaaattgttgaggcggagatggacctgaccaaggccaagagc 439
||||| ||||||||||| ||||||| |||||| |||||||||||||||| | |||||||
Sbjct: 1 tgcaatgcgattggaagcaaaattgctgaggcacagatggacctgaccaacggcaagagc 60
Query: 440 gaggggtacctgtgggggaacaggactgcagctgtggactccgacaagaagcagcag 496
|||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 61 gaggggtacctgtgggggaacaggactgcatctgtcaactccgacaagaagcagcag 117
>gb|CW059429.1|CW059429 104_302_10519312_115_30168 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10519312, DNA
sequence
Length = 587
Score = 143 bits (72), Expect = 5e-032
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 191 tcctccgccctcgcctcgggcagggtccctctcgtcatggccttcctctcctgcctcgcc 250
|||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 212 tcctccgccctcgcctcgggcacggtccctctcgtcatgaccttcctctcctgcctcgcc 271
Query: 251 tggctctacgtcgccggccg 270
||||||||||||||||||||
Sbjct: 272 tggctctacgtcgccggccg 291
Score = 109 bits (55), Expect = 7e-022
Identities = 95/107 (88%), Gaps = 6/107 (5%)
Strand = Plus / Plus
Query: 81 caggaggcgccgagagcccagcgtcggagatc---tccgccgccatggagacgctggcca 137
|||||||||| |||||| || |||||| |||| ||||||||||||| |||||||||||
Sbjct: 111 caggaggcgcggagagctcaacgtcggcgatcccctccgccgccatggggacgctggcca 170
Query: 138 gcgccatgcggcgcgaga---accgccggtccaaggccccgccctcc 181
|||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 171 gcgccatgcggcgcgagaaccaccgccggtccaaggccccgtcctcc 217
Score = 83.8 bits (42), Expect = 4e-014
Identities = 56/60 (93%), Gaps = 3/60 (5%)
Strand = Plus / Plus
Query: 272 ttgtggcaggacgcgcagacccgggcgatcctgt---ccggcctcctcgagaagagctct 328
|||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 391 ttgtggcaggacgcgcagacccgggcgatcctgtccgccggcctccacgagaagagctct 450
Score = 60.0 bits (30), Expect = 6e-007
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 339 cgaaggtgctctcggtggaggacaagctta 368
||||||||||||||||||||||||||||||
Sbjct: 558 cgaaggtgctctcggtggaggacaagctta 587
>gb|CW190843.1|CW190843 104_612_11174724_148_36759_038 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11174724, DNA
sequence
Length = 642
Score = 143 bits (72), Expect = 5e-032
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 191 tcctccgccctcgcctcgggcagggtccctctcgtcatggccttcctctcctgcctcgcc 250
|||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 494 tcctccgccctcgcctcgggcacggtccctctcgtcatgaccttcctctcctgcctcgcc 553
Query: 251 tggctctacgtcgccggccg 270
||||||||||||||||||||
Sbjct: 554 tggctctacgtcgccggccg 573
Score = 109 bits (55), Expect = 7e-022
Identities = 95/107 (88%), Gaps = 6/107 (5%)
Strand = Plus / Plus
Query: 81 caggaggcgccgagagcccagcgtcggagatc---tccgccgccatggagacgctggcca 137
|||||||||| |||||| || |||||| |||| ||||||||||||| |||||||||||
Sbjct: 393 caggaggcgcggagagctcaacgtcggcgatcccctccgccgccatggggacgctggcca 452
Query: 138 gcgccatgcggcgcgaga---accgccggtccaaggccccgccctcc 181
|||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 453 gcgccatgcggcgcgagaaccaccgccggtccaaggccccgtcctcc 499
>gb|CW205740.1|CW205740 104_634_11187225_148_36952_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11187225, DNA
sequence
Length = 647
Score = 143 bits (72), Expect = 5e-032
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 191 tcctccgccctcgcctcgggcagggtccctctcgtcatggccttcctctcctgcctcgcc 250
|||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 184 tcctccgccctcgcctcgggcacggtccctctcgtcatgaccttcctctcctgcctcgcc 243
Query: 251 tggctctacgtcgccggccg 270
||||||||||||||||||||
Sbjct: 244 tggctctacgtcgccggccg 263
Score = 109 bits (55), Expect = 7e-022
Identities = 95/107 (88%), Gaps = 6/107 (5%)
Strand = Plus / Plus
Query: 81 caggaggcgccgagagcccagcgtcggagatc---tccgccgccatggagacgctggcca 137
|||||||||| |||||| || |||||| |||| ||||||||||||| |||||||||||
Sbjct: 83 caggaggcgcggagagctcaacgtcggcgatcccctccgccgccatggggacgctggcca 142
Query: 138 gcgccatgcggcgcgaga---accgccggtccaaggccccgccctcc 181
|||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 143 gcgccatgcggcgcgagaaccaccgccggtccaaggccccgtcctcc 189
Score = 83.8 bits (42), Expect = 4e-014
Identities = 56/60 (93%), Gaps = 3/60 (5%)
Strand = Plus / Plus
Query: 272 ttgtggcaggacgcgcagacccgggcgatcctgt---ccggcctcctcgagaagagctct 328
|||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 363 ttgtggcaggacgcgcagacccgggcgatcctgtccgccggcctccacgagaagagctct 422
Score = 60.0 bits (30), Expect = 6e-007
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 339 cgaaggtgctctcggtggaggacaagctta 368
||||||||||||||||||||||||||||||
Sbjct: 530 cgaaggtgctctcggtggaggacaagctta 559
>gb|CW265342.1|CW265342 104_734_11231821_148_35261_053 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11231821, DNA
sequence
Length = 686
Score = 143 bits (72), Expect = 5e-032
Identities = 75/76 (98%)
Strand = Plus / Minus
Query: 638 agtgcaaatcgaggtgatagcttggaccgtaatattgatgatgaaaatcggcagacaaag 697
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 184 agtgcaaatcgaggtgatagcttggaccgtaatattgacgatgaaaatcggcagacaaag 125
Query: 698 gacttcttgattcttg 713
||||||||||||||||
Sbjct: 124 gacttcttgattcttg 109
Score = 117 bits (59), Expect = 3e-024
Identities = 62/63 (98%)
Strand = Plus / Minus
Query: 577 aggtgatgctctgaagaagcttgaggaaaagggtgtagctattcgttttgttattggtcg 636
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 400 aggtgatgctctgaagaagcttgaggaaaagggtgtagttattcgttttgttattggtcg 341
Query: 637 gag 639
|||
Sbjct: 340 gag 338
Score = 99.6 bits (50), Expect = 7e-019
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 515 gtttacactgggtttggctcccgtctcaagaggaacgtcttccgtggctcctggatgcca 574
||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 686 gtttacactgggtttggctcccgtctcaagaggaatgtcttccgtgcttcctggatgccg 627
Query: 575 agaggt 580
||||||
Sbjct: 626 agaggt 621
>gb|CW414148.1|CW414148 fsbb001f113k12f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f113k12, DNA
sequence
Length = 717
Score = 143 bits (72), Expect = 5e-032
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 191 tcctccgccctcgcctcgggcagggtccctctcgtcatggccttcctctcctgcctcgcc 250
|||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 208 tcctccgccctcgcctcgggcacggtccctctcgtcatgaccttcctctcctgcctcgcc 267
Query: 251 tggctctacgtcgccggccg 270
||||||||||||||||||||
Sbjct: 268 tggctctacgtcgccggccg 287
Score = 109 bits (55), Expect = 7e-022
Identities = 95/107 (88%), Gaps = 6/107 (5%)
Strand = Plus / Plus
Query: 81 caggaggcgccgagagcccagcgtcggagatc---tccgccgccatggagacgctggcca 137
|||||||||| |||||| || |||||| |||| ||||||||||||| |||||||||||
Sbjct: 107 caggaggcgcggagagctcaacgtcggcgatcccctccgccgccatggggacgctggcca 166
Query: 138 gcgccatgcggcgcgaga---accgccggtccaaggccccgccctcc 181
|||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 167 gcgccatgcggcgcgagaaccaccgccggtccaaggccccgtcctcc 213
Score = 83.8 bits (42), Expect = 4e-014
Identities = 56/60 (93%), Gaps = 3/60 (5%)
Strand = Plus / Plus
Query: 272 ttgtggcaggacgcgcagacccgggcgatcctgt---ccggcctcctcgagaagagctct 328
|||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 387 ttgtggcaggacgcgcagacccgggcgatcctgtccgccggcctccacgagaagagctct 446
Score = 60.0 bits (30), Expect = 6e-007
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 339 cgaaggtgctctcggtggaggacaagctta 368
||||||||||||||||||||||||||||||
Sbjct: 554 cgaaggtgctctcggtggaggacaagctta 583
>gb|CW499891.1|CW499891 fsbb001f294o04k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f294o04, DNA
sequence
Length = 601
Score = 143 bits (72), Expect = 5e-032
Identities = 78/80 (97%)
Strand = Plus / Minus
Query: 191 tcctccgccctcgcctcgggcagggtccctctcgtcatggccttcctctcctgcctcgcc 250
|||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 382 tcctccgccctcgcctcgggcacggtccctctcgtcatgaccttcctctcctgcctcgcc 323
Query: 251 tggctctacgtcgccggccg 270
||||||||||||||||||||
Sbjct: 322 tggctctacgtcgccggccg 303
Score = 109 bits (55), Expect = 7e-022
Identities = 95/107 (88%), Gaps = 6/107 (5%)
Strand = Plus / Minus
Query: 81 caggaggcgccgagagcccagcgtcggagatc---tccgccgccatggagacgctggcca 137
|||||||||| |||||| || |||||| |||| ||||||||||||| |||||||||||
Sbjct: 483 caggaggcgcggagagctcaacgtcggcgatcccctccgccgccatggggacgctggcca 424
Query: 138 gcgccatgcggcgcgaga---accgccggtccaaggccccgccctcc 181
|||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 423 gcgccatgcggcgcgagaaccaccgccggtccaaggccccgtcctcc 377
Score = 83.8 bits (42), Expect = 4e-014
Identities = 56/60 (93%), Gaps = 3/60 (5%)
Strand = Plus / Minus
Query: 272 ttgtggcaggacgcgcagacccgggcgatcctgt---ccggcctcctcgagaagagctct 328
|||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 203 ttgtggcaggacgcgcagacccgggcgatcctgtccgccggcctccacgagaagagctct 144
Score = 46.1 bits (23), Expect = 0.009
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 339 cgaaggtgctctcggtggaggac 361
|||||||||||||||||||||||
Sbjct: 36 cgaaggtgctctcggtggaggac 14
>gb|CW209355.1|CW209355 104_639_11189196_116_36988_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11189196, DNA
sequence
Length = 658
Score = 127 bits (64), Expect = 3e-027
Identities = 73/76 (96%)
Strand = Plus / Minus
Query: 638 agtgcaaatcgaggtgatagcttggaccgtaatattgatgatgaaaatcggcagacaaag 697
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 135 agtgcaaatcgaggtgatagcttggaccgtaatattgacgatgaaaatcagcagacaaag 76
Query: 698 gacttcttgattcttg 713
||||||||| ||||||
Sbjct: 75 gacttcttgcttcttg 60
Score = 111 bits (56), Expect = 2e-022
Identities = 83/92 (90%)
Strand = Plus / Minus
Query: 489 agcagcagcttcttgccgtcattggagtttacactgggtttggctcccgtctcaagagga 548
||||| |||||||||| ||||| | ||||||||||||||||||| | || ||||||||
Sbjct: 658 agcagaagcttcttgctgtcatggtgttttacactgggtttggctctcatcgcaagagga 599
Query: 549 acgtcttccgtggctcctggatgccaagaggt 580
||||||||||||||||||||||||||||||||
Sbjct: 598 acgtcttccgtggctcctggatgccaagaggt 567
Score = 109 bits (55), Expect = 7e-022
Identities = 58/59 (98%)
Strand = Plus / Minus
Query: 581 gatgctctgaagaagcttgaggaaaagggtgtagctattcgttttgttattggtcggag 639
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 295 gatgctctgaagaagcttgaggaaaagggtgtagttattcgttttgttattggtcggag 237
>gb|CW414149.1|CW414149 fsbb001f113k12k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f113k12, DNA
sequence
Length = 760
Score = 127 bits (64), Expect = 3e-027
Identities = 73/76 (96%)
Strand = Plus / Minus
Query: 638 agtgcaaatcgaggtgatagcttggaccgtaatattgatgatgaaaatcggcagacaaag 697
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 272 agtgcaaatcgaggtgatagcttggaccgtaatattgacgatgaaaatcagcagacaaag 213
Query: 698 gacttcttgattcttg 713
||||||||| ||||||
Sbjct: 212 gacttcttgcttcttg 197
Score = 109 bits (55), Expect = 7e-022
Identities = 58/59 (98%)
Strand = Plus / Minus
Query: 581 gatgctctgaagaagcttgaggaaaagggtgtagctattcgttttgttattggtcggag 639
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 432 gatgctctgaagaagcttgaggaaaagggtgtagttattcgttttgttattggtcggag 374
Score = 89.7 bits (45), Expect = 6e-016
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 524 gggtttggctcccgtctcaagaggaacgtcttccgtggctcctggatgccaagaggt 580
||||||||||| | || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 gggtttggctctcatcgcaagaggaacgtcttccgtggctcctggatgccaagaggt 704
>gb|BG053873.1|BG053873 RHIZ2_11_A01.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 111
Score = 123 bits (62), Expect = 5e-026
Identities = 82/88 (93%), Gaps = 3/88 (3%)
Strand = Plus / Plus
Query: 102 cgtcggagatctccgccgc---catggagacgctggccagcgccatgcggcgcgagaacc 158
|||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||
Sbjct: 16 cgtcggagatctccgcagcagccatggagtcgctggccagcgccatgcggcgcgagaacc 75
Query: 159 gccggtccaaggccccgccctcctcctc 186
||||||||||||||||| ||||||||||
Sbjct: 76 gccggtccaaggccccgtcctcctcctc 103
>gb|CW132323.1|CW132323 104_515_11116148_148_34793_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11116148, DNA
sequence
Length = 562
Score = 121 bits (61), Expect = 2e-025
Identities = 128/149 (85%), Gaps = 11/149 (7%)
Strand = Plus / Plus
Query: 43 gtcctccctttccgtttaaggcagcaagcaggagcagacaggaggcgccg-------aga 95
||||| |||||||||| | |||||||||||| |||||||||||||||||| |||
Sbjct: 415 gtccttcctttccgttaacggcagcaagcag-agcagacaggaggcgccgcccgccgaga 473
Query: 96 gcccagcgtcggagatctccgccgc---catggagacgctggccagcgccatgcggcgcg 152
| |||||||||||||||||| |||| ||||||| ||||||||||||||||||| ||||
Sbjct: 474 gtccagcgtcggagatctcctccgcagccatggagtcgctggccagcgccatgcgtcgcg 533
Query: 153 agaaccgccggtccaaggccccgccctcc 181
||||||||||| |||||||||| |||||
Sbjct: 534 agaaccgccgggtcaaggccccgtcctcc 562
>gb|CW334500.1|CW334500 104_833_11482534_148_36072_095 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11482534, DNA
sequence
Length = 631
Score = 97.6 bits (49), Expect = 3e-018
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 1046 agtgcgtcactgcagagttatgcacacgatgatatatcagtaggttcatggatgatggga 1105
|||||||||||||||||||||||||| || || ||||||||||||||||||||||||||
Sbjct: 558 agtgcgtcactgcagagttatgcacatgacgacatatcagtaggttcatggatgatgggg 617
Query: 1106 ctgaa 1110
|||||
Sbjct: 618 ctgaa 622
>gb|CL152401.1|CL152401 104_335_10779931_114_31363_331 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10779931, DNA
sequence
Length = 752
Score = 89.7 bits (45), Expect = 6e-016
Identities = 48/49 (97%)
Strand = Plus / Minus
Query: 929 caacaatggtatgaacctgagtggtggaaatttggagattcaaaaacgt 977
|||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 577 caacaatggtatgaacctgactggtggaaatttggagattcaaaaacgt 529
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 408,970
Number of Sequences: 832831
Number of extensions: 408970
Number of successful extensions: 115256
Number of sequences better than 0.5: 58
Number of HSP's better than 0.5 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 115036
Number of HSP's gapped (non-prelim): 173
length of query: 1380
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1360
effective length of database: 474,703,049
effective search space: 645596146640
effective search space used: 645596146640
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)