BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2419471.2.1
(556 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG488374.1|BG488374 RHIZ2_62_H06.b1_A003 Rhizome2 (RHIZ2... 712 0.0
gb|AW564150.1|AW564150 LG1_285_G11.b1_A002 Light Grown 1 (L... 700 0.0
gb|AW565192.1|AW565192 LG1_328_B12.b1_A002 Light Grown 1 (L... 700 0.0
gb|AW922605.1|AW922605 DG1_46_E01.b1_A002 Dark Grown 1 (DG1... 700 0.0
gb|BE356326.1|BE356326 DG1_124_C12.b1_A002 Dark Grown 1 (DG... 700 0.0
gb|BE356997.1|BE356997 DG1_146_C05.b1_A002 Dark Grown 1 (DG... 700 0.0
gb|BE362385.1|BE362385 DG1_86_G11.b1_A002 Dark Grown 1 (DG1... 700 0.0
gb|BE594385.1|BE594385 PI1_32_G11.b2_A002 Pathogen induced ... 700 0.0
gb|BE594579.1|BE594579 PI1_34_H11.b1_A002 Pathogen induced ... 700 0.0
gb|BE597578.1|BE597578 PI1_71_D08.b1_A002 Pathogen induced ... 700 0.0
gb|BG356093.1|BG356093 EM1_21_C10.b1_A002 Embryo 1 (EM1) So... 700 0.0
gb|BG462971.1|BG462971 EM1_46_H10.b1_A002 Embryo 1 (EM1) So... 700 0.0
gb|BG649727.1|BG649727 RHIZ2_82_H03.b1_A003 Rhizome2 (RHIZ2... 700 0.0
gb|BM317563.1|BM317563 LG1_214_C09.b9_A002 Light Grown 1 (L... 700 0.0
gb|BM325476.1|BM325476 PIC1_45_A08.b1_A002 Pathogen-infecte... 700 0.0
gb|BM325843.1|BM325843 PIC1_53_E04.b1_A002 Pathogen-infecte... 700 0.0
gb|CD225621.1|CD225621 CCC1_40_C04.g1_A007 Callus culture/c... 700 0.0
gb|CD430434.1|CD430434 ETH1_18_E11.g1_A002 Ethylene-treated... 700 0.0
gb|CF486633.1|CF486633 POL1_38_G10.g1_A002 Pollen Sorghum b... 700 0.0
gb|CN129525.1|CN129525 RHOH1_35_H09.g1_A002 Acid- and alkal... 700 0.0
gb|CN136390.1|CN136390 OX1_42_F05.g1_A002 Oxidatively-stres... 700 0.0
gb|CN140973.1|CN140973 OX1_48_C02.g1_A002 Oxidatively-stres... 700 0.0
gb|CX606362.1|CX606362 ANR1_2_D02.g1_A002 Anaerobic roots S... 700 0.0
gb|CX608420.1|CX608420 ANR1_38_B10.g1_A002 Anaerobic roots ... 700 0.0
gb|BE360694.1|BE360694 DG1_66_D11.b2_A002 Dark Grown 1 (DG1... 692 0.0
gb|CN140665.1|CN140665 OX1_45_G08.g1_A002 Oxidatively-stres... 692 0.0
gb|CX607251.1|CX607251 ANR1_7_B10.g1_A002 Anaerobic roots S... 692 0.0
gb|AW671493.1|AW671493 LG1_347_F07.b1_A002 Light Grown 1 (L... 688 0.0
gb|CB925829.1|CB925829 ABA1_23_H03.g1_A012 Abscisic acid-tr... 686 0.0
gb|CD204033.1|CD204033 HS1_3_D04.g1_A012 Heat-shocked seedl... 686 0.0
gb|CD204888.1|CD204888 HS1_10_G03.g1_A012 Heat-shocked seed... 686 0.0
gb|CD204925.1|CD204925 HS1_10_D06.g1_A012 Heat-shocked seed... 686 0.0
gb|CD209747.1|CD209747 HS1_54_E01.g1_A012 Heat-shocked seed... 686 0.0
gb|CD231037.1|CD231037 SS1_7_G07.g1_A012 Salt-stressed seed... 686 0.0
gb|CD232482.1|CD232482 SS1_45_G04.g1_A012 Salt-stressed see... 686 0.0
gb|CX612317.1|CX612317 GABR1_1_F05.g1_A002 GA- or brassinol... 684 0.0
gb|CX612501.1|CX612501 GABR1_2_F11.g1_A002 GA- or brassinol... 684 0.0
gb|BE125028.1|BE125028 DG1_14_B11.b1_A002 Dark Grown 1 (DG1... 682 0.0
gb|CN142711.1|CN142711 WOUND1_11_E10.g1_A002 Wounded leaves... 678 0.0
gb|BE919103.1|BE919103 FM1_3_B09.b1_A003 Floral-Induced Mer... 670 0.0
gb|BG463259.1|BG463259 EM1_48_D04.b1_A002 Embryo 1 (EM1) So... 670 0.0
gb|BI098351.1|BI098351 IP1_31_C11.b1_A002 Immature pannicle... 670 0.0
gb|BE598900.1|BE598900 PI1_83_A11.b1_A002 Pathogen induced ... 668 0.0
gb|CX613354.1|CX613354 GABR1_7_E06.g1_A002 GA- or brassinol... 668 0.0
gb|CX615658.1|CX615658 GABR1_21_C07.g1_A002 GA- or brassino... 668 0.0
gb|BG357819.1|BG357819 OV2_30_F09.b1_A002 Ovary 2 (OV2) Sor... 662 0.0
gb|CD236323.1|CD236323 SS1_33_F06.g1_A012 Salt-stressed see... 662 0.0
gb|CF488723.1|CF488723 POL1_51_F11.g1_A002 Pollen Sorghum b... 662 0.0
gb|CX614030.1|CX614030 GABR1_11_D09.g1_A002 GA- or brassino... 660 0.0
gb|CF487407.1|CF487407 POL1_43_D02.g1_A002 Pollen Sorghum b... 658 0.0
gb|BE365909.1|BE365909 PI1_2_H03.b1_A002 Pathogen induced 1... 654 0.0
gb|CN150172.1|CN150172 WOUND1_67_A06.g1_A002 Wounded leaves... 654 0.0
gb|CN146941.1|CN146941 WOUND1_44_H11.g1_A002 Wounded leaves... 646 0.0
gb|BF421307.1|BF421307 FM1_7_B01.b1_A003 Floral-Induced Mer... 642 0.0
gb|BF422143.1|BF422143 FM1_12_D04.b1_A003 Floral-Induced Me... 636 0.0
gb|BF655708.1|BF655708 FM1_47_H08.b1_A003 Floral-Induced Me... 630 e-179
gb|BF420996.1|BF420996 FM1_5_A01.b1_A003 Floral-Induced Mer... 626 e-178
gb|BF704662.1|BF704662 FM1_49_H09.b1_A003 Floral-Induced Me... 626 e-178
gb|BE363037.1|BE363037 DG1_9_B10.b1_A002 Dark Grown 1 (DG1)... 624 e-177
gb|BG322683.1|BG322683 EM1_13_A08.b1_A002 Embryo 1 (EM1) So... 624 e-177
gb|BG411069.1|BG411069 EM1_25_D03.b1_A002 Embryo 1 (EM1) So... 620 e-176
gb|BG649697.1|BG649697 RHIZ2_82_E04.b1_A003 Rhizome2 (RHIZ2... 620 e-176
gb|BG158420.1|BG158420 FM1_60_C06.b1_A003 Floral-Induced Me... 618 e-175
gb|BG465651.1|BG465651 RHIZ2_47_A11.b1_A003 Rhizome2 (RHIZ2... 618 e-175
gb|BG947938.1|BG947938 IP1_7_D02.b1_A002 Immature pannicle ... 618 e-175
gb|AW563567.1|AW563567 LG1_241_C01.b1_A002 Light Grown 1 (L... 617 e-175
gb|AW563356.1|AW563356 LG1_235_F06.b1_A002 Light Grown 1 (L... 615 e-174
gb|BE597610.1|BE597610 PI1_71_H11.b1_A002 Pathogen induced ... 611 e-173
gb|BE600808.1|BE600808 PI1_90_D10.b1_A002 Pathogen induced ... 577 e-163
gb|BG558847.1|BG558847 RHIZ2_57_D04.b1_A003 Rhizome2 (RHIZ2... 577 e-163
gb|BI643706.1|BI643706 IP1_56_A07.b1_A002 Immature pannicle... 577 e-163
gb|BE598049.1|BE598049 PI1_65_A08.b1_A002 Pathogen induced ... 563 e-159
gb|BG412187.1|BG412187 OV2_38_H12.b1_A002 Ovary 2 (OV2) Sor... 549 e-155
gb|AW563960.1|AW563960 LG1_275_D07.b1_A002 Light Grown 1 (L... 547 e-154
gb|BG050817.1|BG050817 FM1_71_A11.b1_A003 Floral-Induced Me... 533 e-150
gb|AW923082.1|AW923082 DG1_49_H12.b1_A002 Dark Grown 1 (DG1... 513 e-144
gb|BE601088.1|BE601088 PI1_96_G03.b1_A002 Pathogen induced ... 513 e-144
gb|CD210892.1|CD210892 HS1_66_E01.g1_A012 Heat-shocked seed... 502 e-140
gb|BG357683.1|BG357683 OV2_29_A03.b1_A002 Ovary 2 (OV2) Sor... 490 e-137
gb|CD235466.1|CD235466 SS1_29_B05.g1_A012 Salt-stressed see... 490 e-137
gb|BG560586.1|BG560586 RHIZ2_59_C04.b1_A003 Rhizome2 (RHIZ2... 462 e-128
gb|AW287380.2|AW287380 LG1_303_B11.b1_A002 Light Grown 1 (L... 434 e-120
gb|BE600993.1|BE600993 PI1_95_F05.b1_A002 Pathogen induced ... 426 e-118
gb|BE601082.1|BE601082 PI1_96_F08.b1_A002 Pathogen induced ... 424 e-117
gb|AW922620.1|AW922620 DG1_46_B03.b1_A002 Dark Grown 1 (DG1... 410 e-113
gb|AW286727.2|AW286727 LG1_204_E12.b1_A002 Light Grown 1 (L... 400 e-110
gb|AW287521.2|AW287521 LG1_242_B01.b1_A002 Light Grown 1 (L... 392 e-107
gb|BE126158.1|BE126158 DG1_66_D11.b1_A002 Dark Grown 1 (DG1... 392 e-107
gb|BM322421.1|BM322421 PIC1_4_F02.b1_A002 Pathogen-infected... 379 e-103
gb|AW677075.1|AW677075 DG1_4_B01.b1_A002 Dark Grown 1 (DG1)... 377 e-103
gb|BM324707.1|BM324707 PIC1_34_F01.b1_A002 Pathogen-infecte... 371 e-101
gb|BE358281.1|BE358281 DG1_27_E04.b2_A002 Dark Grown 1 (DG1... 345 3e-093
gb|BF655825.1|BF655825 FM1_41_A05.b1_A003 Floral-Induced Me... 329 2e-088
gb|BG241010.1|BG241010 OV1_37_B03.b1_A002 Ovary 1 (OV1) Sor... 319 2e-085
gb|CD207754.1|CD207754 HS1_34_C02.g1_A012 Heat-shocked seed... 305 2e-081
gb|BG053099.1|BG053099 RHIZ2_16_F01.b1_A003 Rhizome2 (RHIZ2... 299 1e-079
gb|AW671877.1|AW671877 LG1_352_G11.b1_A002 Light Grown 1 (L... 287 5e-076
gb|AW677078.1|AW677078 DG1_4_B06.b1_A002 Dark Grown 1 (DG1)... 287 5e-076
gb|BE357928.1|BE357928 DG1_23_E04.b1_A002 Dark Grown 1 (DG1... 287 5e-076
gb|BE358988.1|BE358988 DG1_38_G05.b1_A002 Dark Grown 1 (DG1... 287 5e-076
gb|BE361303.1|BE361303 DG1_71_C10.b1_A002 Dark Grown 1 (DG1... 287 5e-076
gb|BE361961.1|BE361961 DG1_83_F11.b1_A002 Dark Grown 1 (DG1... 287 5e-076
gb|BE595817.1|BE595817 PI1_54_E02.b1_A002 Pathogen induced ... 287 5e-076
gb|BE918096.1|BE918096 OV1_1_H01.b1_A002 Ovary 1 (OV1) Sorg... 287 5e-076
gb|BG047624.1|BG047624 OV1_26_B09.b1_A002 Ovary 1 (OV1) Sor... 287 5e-076
gb|BG054375.1|BG054375 OV2_3_F05.b1_A002 Ovary 2 (OV2) Sorg... 287 5e-076
gb|BG158105.1|BG158105 EM1_8_E10.b1_A002 Embryo 1 (EM1) Sor... 287 5e-076
gb|BG464094.1|BG464094 EM1_69_F02.b1_A002 Embryo 1 (EM1) So... 287 5e-076
gb|BG464294.1|BG464294 EM1_72_A05.b1_A002 Embryo 1 (EM1) So... 287 5e-076
gb|BG465499.1|BG465499 RHIZ2_45_D01.b1_A003 Rhizome2 (RHIZ2... 287 5e-076
gb|BG948543.1|BG948543 IP1_10_H10.b1_A002 Immature pannicle... 287 5e-076
gb|BI075280.1|BI075280 IP1_18_D11.b1_A002 Immature pannicle... 287 5e-076
gb|BI076189.1|BI076189 IP1_26_H01.b1_A002 Immature pannicle... 287 5e-076
gb|BI098922.1|BI098922 IP1_35_A06.b1_A002 Immature pannicle... 287 5e-076
gb|BI140686.1|BI140686 IP1_52_D12.b1_A002 Immature pannicle... 287 5e-076
gb|BI245887.1|BI245887 IP1_64_G08.b1_A002 Immature pannicle... 287 5e-076
gb|BG357757.1|BG357757 OV2_29_H10.b1_A002 Ovary 2 (OV2) Sor... 281 3e-074
gb|BF421417.1|BF421417 FM1_8_C06.b1_A003 Floral-Induced Mer... 280 1e-073
gb|BF587443.1|BF587443 FM1_36_D10.b1_A003 Floral-Induced Me... 280 1e-073
gb|BF588287.1|BF588287 FM1_39_H07.b1_A003 Floral-Induced Me... 280 1e-073
gb|BG050282.1|BG050282 FM1_68_H11.b1_A003 Floral-Induced Me... 280 1e-073
gb|BG102257.1|BG102257 RHIZ2_24_A08.b1_A003 Rhizome2 (RHIZ2... 280 1e-073
gb|BG102832.1|BG102832 RHIZ2_34_A03.b1_A003 Rhizome2 (RHIZ2... 280 1e-073
gb|BG103021.1|BG103021 RHIZ2_36_B05.b1_A003 Rhizome2 (RHIZ2... 280 1e-073
gb|BG241660.1|BG241660 RHIZ2_49_C09.b1_A003 Rhizome2 (RHIZ2... 280 1e-073
gb|BG465492.1|BG465492 RHIZ2_45_C05.b1_A003 Rhizome2 (RHIZ2... 280 1e-073
gb|BG488185.1|BG488185 RHIZ2_60_E11.b1_A003 Rhizome2 (RHIZ2... 280 1e-073
gb|BG488337.1|BG488337 RHIZ2_62_D10.b1_A003 Rhizome2 (RHIZ2... 280 1e-073
gb|BG488346.1|BG488346 RHIZ2_62_E07.b1_A003 Rhizome2 (RHIZ2... 280 1e-073
gb|BG488347.1|BG488347 RHIZ2_62_E08.b1_A003 Rhizome2 (RHIZ2... 280 1e-073
gb|BG560001.1|BG560001 RHIZ2_68_C05.b1_A003 Rhizome2 (RHIZ2... 280 1e-073
gb|BG649144.1|BG649144 EM1_56_E08.b1_A002 Embryo 1 (EM1) So... 280 1e-073
gb|DN551925.1|DN551925 pSPR-RT-MR-H2_F08_C293 pSPR Sorghum ... 280 1e-073
gb|BF587476.1|BF587476 FM1_36_G10.b1_A003 Floral-Induced Me... 272 3e-071
gb|BF588158.1|BF588158 FM1_38_D12.b1_A003 Floral-Induced Me... 272 3e-071
gb|BG560314.1|BG560314 RHIZ2_72_G03.b1_A003 Rhizome2 (RHIZ2... 272 3e-071
gb|BI246163.1|BI246163 IP1_67_G03.b1_A002 Immature pannicle... 272 3e-071
gb|CF485786.1|CF485786 POL1_33_D12.g1_A002 Pollen Sorghum b... 268 5e-070
gb|BE599895.1|BE599895 PI1_77_D06.b1_A002 Pathogen induced ... 266 2e-069
gb|AW924400.1|AW924400 WS1_69_D09.b1_A002 Water-stressed 1 ... 264 8e-069
gb|BG052200.1|BG052200 RHIZ2_7_D10.b1_A003 Rhizome2 (RHIZ2)... 264 8e-069
gb|BG103341.1|BG103341 RHIZ2_19_A05.b1_A003 Rhizome2 (RHIZ2... 264 8e-069
gb|BM325081.1|BM325081 PIC1_39_E11.b1_A002 Pathogen-infecte... 262 3e-068
gb|BF705407.1|BF705407 RHIZ2_3_F03.b1_A003 Rhizome2 (RHIZ2)... 260 1e-067
gb|AW671107.1|AW671107 LG1_329_A06.b1_A002 Light Grown 1 (L... 256 2e-066
gb|BG557368.1|BG557368 EM1_43_B03.b1_A002 Embryo 1 (EM1) So... 256 2e-066
gb|BF657755.1|BF657755 OV2_17_G03.b1_A002 Ovary 2 (OV2) Sor... 254 7e-066
gb|AW747134.1|AW747134 WS1_66_A02.b1_A002 Water-stressed 1 ... 246 2e-063
gb|AW287295.2|AW287295 LG1_269_B05.b1_A002 Light Grown 1 (L... 234 7e-060
gb|BG412797.1|BG412797 OV2_35_A01.b1_A002 Ovary 2 (OV2) Sor... 232 3e-059
gb|BF421400.1|BF421400 FM1_8_D06.b1_A003 Floral-Induced Mer... 226 2e-057
gb|BG102200.1|BG102200 RHIZ2_22_A08.b1_A003 Rhizome2 (RHIZ2... 226 2e-057
gb|BE357747.1|BE357747 DG1_22_E03.b1_A002 Dark Grown 1 (DG1... 218 4e-055
gb|BF481350.1|BF481350 FM1_18_A01.b1_A003 Floral-Induced Me... 218 4e-055
gb|BG411068.1|BG411068 EM1_25_D02.b1_A002 Embryo 1 (EM1) So... 218 4e-055
gb|CW032919.1|CW032919 104_262_10501663_115_30362 Sorghum m... 210 1e-052
gb|BG047674.1|BG047674 OV1_25_C03.b1_A002 Ovary 1 (OV1) Sor... 210 1e-052
gb|BG463436.1|BG463436 EM1_49_E01.b1_A002 Embryo 1 (EM1) So... 210 1e-052
gb|CF073553.1|CF073553 FE1_10_B03.g1_A002 Iron-deficient se... 210 1e-052
gb|BG157989.1|BG157989 EM1_7_A01.b1_A002 Embryo 1 (EM1) Sor... 208 4e-052
gb|BG053733.1|BG053733 RHIZ2_9_B02.b1_A003 Rhizome2 (RHIZ2)... 204 6e-051
gb|BF481360.1|BF481360 FM1_18_B01.b1_A003 Floral-Induced Me... 202 2e-050
gb|BF421201.1|BF421201 FM1_6_F09.b1_A003 Floral-Induced Mer... 200 1e-049
gb|BE596186.1|BE596186 PI1_50_F07.b1_A002 Pathogen induced ... 198 4e-049
gb|BE361068.1|BE361068 DG1_69_D01.b1_A002 Dark Grown 1 (DG1... 176 1e-042
gb|BF655873.1|BF655873 FM1_41_F09.b1_A003 Floral-Induced Me... 170 9e-041
gb|CN128207.1|CN128207 RHOH1_27_F10.g1_A002 Acid- and alkal... 170 9e-041
gb|CW404670.1|CW404670 fsbb001f096o14k0 Sorghum methylation... 165 5e-039
gb|CW260858.1|CW260858 104_727_11229193_148_35201_003 Sorgh... 163 2e-038
gb|BG947906.1|BG947906 IP1_6_H01.b1_A002 Immature pannicle ... 163 2e-038
gb|BG241664.1|BG241664 RHIZ2_49_D01.b1_A003 Rhizome2 (RHIZ2... 159 3e-037
gb|BG412805.1|BG412805 OV2_35_B01.b1_A002 Ovary 2 (OV2) Sor... 153 2e-035
gb|BG054308.1|BG054308 OV2_1_A04.b1_A002 Ovary 2 (OV2) Sorg... 151 8e-035
gb|CW260857.1|CW260857 104_727_11229193_116_35197_003 Sorgh... 135 5e-030
gb|AW922177.1|AW922177 LG1_346_D03.b1_A002 Light Grown 1 (L... 111 7e-023
gb|BE366301.1|BE366301 PI1_32_G11.b1_A002 Pathogen induced ... 109 3e-022
gb|CL153474.1|CL153474 104_337_10780741_114_31367_373 Sorgh... 107 1e-021
gb|AW564824.1|AW564824 LG1_305_B07.b1_A002 Light Grown 1 (L... 105 4e-021
gb|BM323288.1|BM323288 PIC1_17_E12.b1_A002 Pathogen-infecte... 101 7e-020
gb|BG560104.1|BG560104 RHIZ2_69_D09.b1_A003 Rhizome2 (RHIZ2... 100 3e-019
gb|BG559290.1|BG559290 RHIZ2_53_A07.b1_A003 Rhizome2 (RHIZ2... 92 6e-017
gb|BG464085.1|BG464085 EM1_69_E02.b1_A002 Embryo 1 (EM1) So... 86 4e-015
gb|CW302715.1|CW302715 104_787_11464863_116_35674_064 Sorgh... 82 6e-014
gb|CW321762.1|CW321762 104_815_11475727_148_35942_028 Sorgh... 82 6e-014
gb|CW405073.1|CW405073 fsbb001f097h18k0 Sorghum methylation... 82 6e-014
gb|BE356336.1|BE356336 DG1_124_A05.b1_A002 Dark Grown 1 (DG... 82 6e-014
gb|BF655697.1|BF655697 FM1_47_G08.b1_A003 Floral-Induced Me... 80 2e-013
gb|CW194690.1|CW194690 104_618_11180235_116_37427_016 Sorgh... 66 4e-009
gb|BG054129.1|BG054129 OV2_1_E11.b1_A002 Ovary 2 (OV2) Sorg... 66 4e-009
gb|CD423182.1|CD423182 SA1_27_F08.g1_A002 Salicylic acid-tr... 60 2e-007
gb|CN137899.1|CN137899 OX1_60_A05.g1_A002 Oxidatively-stres... 52 6e-005
gb|AW563863.1|AW563863 LG1_272_F05.b1_A002 Light Grown 1 (L... 48 9e-004
gb|BZ335046.1|BZ335046 hx95b06.b1 WGS-SbicolorF (JM107 adap... 42 0.053
gb|BZ335047.1|BZ335047 hx95b06.g1 WGS-SbicolorF (JM107 adap... 42 0.053
gb|CL149764.1|CL149764 104_330_10778044_116_31354_364 Sorgh... 42 0.053
gb|CW119946.1|CW119946 104_497_11109048_148_34645_094 Sorgh... 42 0.053
gb|CW196728.1|CW196728 104_620_11181318_116_36812_017 Sorgh... 42 0.053
gb|CW251627.1|CW251627 104_714_11224038_148_35071_025 Sorgh... 42 0.053
gb|CW267530.1|CW267530 104_737_11400788_148_35294_066 Sorgh... 42 0.053
gb|CW407719.1|CW407719 fsbb001f101f03f0 Sorghum methylation... 42 0.053
gb|BG050028.1|BG050028 FM1_65_E12.b1_A003 Floral-Induced Me... 42 0.053
gb|BG649145.1|BG649145 EM1_56_E09.b1_A002 Embryo 1 (EM1) So... 42 0.053
gb|CD430055.1|CD430055 ETH1_13_A10.g1_A002 Ethylene-treated... 42 0.053
gb|CF429514.1|CF429514 PH1_22_B06.g1_A002 Phosphorous-defic... 42 0.053
gb|CN140661.1|CN140661 OX1_45_G04.g1_A002 Oxidatively-stres... 42 0.053
gb|CN140759.1|CN140759 OX1_46_G07.g1_A002 Oxidatively-stres... 42 0.053
gb|AF470058.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 42 0.053
gb|AF470064.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 42 0.053
gb|CL151980.1|CL151980 104_335_10779634_116_31364_034 Sorgh... 40 0.21
gb|CW117663.1|CW117663 104_493_11107774_148_34613_083 Sorgh... 40 0.21
gb|CW190562.1|CW190562 104_612_11174571_116_36757_012 Sorgh... 40 0.21
gb|CW196986.1|CW196986 104_621_11181452_116_36824_078 Sorgh... 40 0.21
gb|CW196987.1|CW196987 104_621_11181452_148_36823_078 Sorgh... 40 0.21
gb|CW200012.1|CW200012 104_625_11183823_116_36857_058 Sorgh... 40 0.21
gb|CW309887.1|CW309887 104_798_11469429_116_36239_081 Sorgh... 40 0.21
gb|CW379227.1|CW379227 fsbb001f058g05f0 Sorghum methylation... 40 0.21
gb|CW379228.1|CW379228 fsbb001f058g05k0 Sorghum methylation... 40 0.21
gb|BG053220.1|BG053220 RHIZ2_30_F07.b1_A003 Rhizome2 (RHIZ2... 40 0.21
gb|CD228219.1|CD228219 CCC1_6_A03.g1_A007 Callus culture/ce... 40 0.21
gb|CD236511.1|CD236511 SS1_34_A04.g1_A012 Salt-stressed see... 40 0.21
>gb|BG488374.1|BG488374 RHIZ2_62_H06.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 566
Score = 712 bits (359), Expect = 0.0
Identities = 445/473 (94%), Gaps = 8/473 (1%)
Strand = Plus / Plus
Query: 84 ccacccacccgcccgctgcctccgccggatctcgtcggactcggatccgcccgaccacga 143
|||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 ccacccgcccgcccgccgcctccgccggatctcgtcggactcggatccgcccgaccac-- 123
Query: 144 ccaccccccgccgccgccgcgcagcagcagcagatcagagaagatggccggactcgacac 203
||| ||||||||| || |||||||||||||||||||||||||||| | |||||||
Sbjct: 124 ----cccgcgccgccgcagc--agcagcagcagatcagagaagatggccgcagtcgacac 177
Query: 204 cttcctcttcacctcggagtccgtgaacgagggacaccctgacaagctctgcgaccaggt 263
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 178 cttcctcttcacctcggagtctgtgaacgagggacacccagacaagctctgcgaccaggt 237
Query: 264 ctcagatgctgttctggacgcttgccttgctgaggaccctgacagcaaggttgcttgcga 323
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 ctcagatgccgttcttgacgcttgccttgctgaggaccctgacagcaaggttgcttgcga 297
Query: 324 gacctgcaccaagaccaacatggtcatggtctttggtgagatcaccaccaaggccaatgt 383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gacctgcaccaagaccaacatggtcatggtctttggtgagatcaccaccaaggccaatgt 357
Query: 384 cgactacgagaagattgtcagggagacatgccgcaacattggtttcgtgtcgaacgatgt 443
|||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 358 cgactatgagaagattgtcagggagacctgccgcaacattggtttcgtgtcagctgatgt 417
Query: 444 cgggcttgacgctgaccactgcaaggtgcttgggaacattgagcagcagtcccctgatat 503
|||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||
Sbjct: 418 cgggcttgacgctgaccactgcaaggtgctcgtgaacattgagcagcagtctcctgatat 477
Query: 504 tgctcagggtgtgcacgggcacttcaccaagcgccccgaggagattggagctg 556
|||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 478 tgctcagggtgtgcacggccacttcaccaagcgccccgaggagattggagctg 530
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 3 cggatctgagacgagacgag 22
||||||||||||||||||||
Sbjct: 1 cggatctgagacgagacgag 20
>gb|AW564150.1|AW564150 LG1_285_G11.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 600
Score = 700 bits (353), Expect = 0.0
Identities = 430/456 (94%), Gaps = 11/456 (2%)
Strand = Plus / Plus
Query: 101 gcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgccgccgc 160
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 75 gcctccgccggatctcgtcggactcggatccgcccgacca------ccccgcgccgccgc 128
Query: 161 cgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcgg 220
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 129 -----agcagcagcagatcagagaagatggccgcagtcgacaccttcctcttcacctcgg 183
Query: 221 agtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctgg 280
|||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 184 agtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctgttcttg 243
Query: 281 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 303
Query: 341 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 363
Query: 401 tcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgacc 460
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 364 tcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgacc 423
Query: 461 actgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacg 520
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 424 actgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtgtgcacg 483
Query: 521 ggcacttcaccaagcgccccgaggagattggagctg 556
| ||||||||||||||||||||||||||||||||||
Sbjct: 484 gccacttcaccaagcgccccgaggagattggagctg 519
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gtcggatctgagacgagacgag 22
||||||||||||||||||||||
Sbjct: 9 gtcggatctgagacgagacgag 30
>gb|AW565192.1|AW565192 LG1_328_B12.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 641
Score = 700 bits (353), Expect = 0.0
Identities = 430/456 (94%), Gaps = 11/456 (2%)
Strand = Plus / Plus
Query: 101 gcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgccgccgc 160
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 66 gcctccgccggatctcgtcggactcggatccgcccgacca------ccccgcgccgccgc 119
Query: 161 cgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcgg 220
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 120 -----agcagcagcagatcagagaagatggccgcagtcgacaccttcctcttcacctcgg 174
Query: 221 agtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctgg 280
|||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 175 agtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctgttcttg 234
Query: 281 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 294
Query: 341 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 354
Query: 401 tcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgacc 460
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 355 tcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgacc 414
Query: 461 actgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacg 520
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 415 actgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtgtgcacg 474
Query: 521 ggcacttcaccaagcgccccgaggagattggagctg 556
| ||||||||||||||||||||||||||||||||||
Sbjct: 475 gccacttcaccaagcgccccgaggagattggagctg 510
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 tcggatctgagacgagacgag 22
|||||||||||||||||||||
Sbjct: 1 tcggatctgagacgagacgag 21
>gb|AW922605.1|AW922605 DG1_46_E01.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 611
Score = 700 bits (353), Expect = 0.0
Identities = 430/456 (94%), Gaps = 11/456 (2%)
Strand = Plus / Plus
Query: 101 gcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgccgccgc 160
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 65 gcctccgccggatctcgtcggactcggatccgcccgacca------ccccgcgccgccgc 118
Query: 161 cgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcgg 220
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 119 -----agcagcagcagatcagagaagatggccgcagtcgacaccttcctcttcacctcgg 173
Query: 221 agtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctgg 280
|||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 174 agtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctgttcttg 233
Query: 281 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 293
Query: 341 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 353
Query: 401 tcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgacc 460
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 354 tcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgacc 413
Query: 461 actgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacg 520
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 414 actgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtgtgcacg 473
Query: 521 ggcacttcaccaagcgccccgaggagattggagctg 556
| ||||||||||||||||||||||||||||||||||
Sbjct: 474 gccacttcaccaagcgccccgaggagattggagctg 509
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 3 cggatctgagacgagacgag 22
||||||||||||||||||||
Sbjct: 1 cggatctgagacgagacgag 20
>gb|BE356326.1|BE356326 DG1_124_C12.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 593
Score = 700 bits (353), Expect = 0.0
Identities = 430/456 (94%), Gaps = 11/456 (2%)
Strand = Plus / Plus
Query: 101 gcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgccgccgc 160
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 68 gcctccgccggatctcgtcggactcggatccgcccgacca------ccccgcgccgccgc 121
Query: 161 cgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcgg 220
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 122 -----agcagcagcagatcagagaagatggccgcagtcgacaccttcctcttcacctcgg 176
Query: 221 agtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctgg 280
|||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 177 agtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctgttcttg 236
Query: 281 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 296
Query: 341 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 356
Query: 401 tcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgacc 460
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 357 tcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgacc 416
Query: 461 actgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacg 520
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 417 actgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtgtgcacg 476
Query: 521 ggcacttcaccaagcgccccgaggagattggagctg 556
| ||||||||||||||||||||||||||||||||||
Sbjct: 477 gccacttcaccaagcgccccgaggagattggagctg 512
>gb|BE356997.1|BE356997 DG1_146_C05.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 505
Score = 700 bits (353), Expect = 0.0
Identities = 430/456 (94%), Gaps = 11/456 (2%)
Strand = Plus / Plus
Query: 101 gcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgccgccgc 160
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 60 gcctccgccggatctcgtcggactcggatccgcccgacca------ccccgcgccgccgc 113
Query: 161 cgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcgg 220
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 114 -----agcagcagcagatcagagaagatggccgcagtcgacaccttcctcttcacctcgg 168
Query: 221 agtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctgg 280
|||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 169 agtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctgttcttg 228
Query: 281 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 288
Query: 341 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 348
Query: 401 tcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgacc 460
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 349 tcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgacc 408
Query: 461 actgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacg 520
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 409 actgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtgtgcacg 468
Query: 521 ggcacttcaccaagcgccccgaggagattggagctg 556
| ||||||||||||||||||||||||||||||||||
Sbjct: 469 gccacttcaccaagcgccccgaggagattggagctg 504
>gb|BE362385.1|BE362385 DG1_86_G11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 592
Score = 700 bits (353), Expect = 0.0
Identities = 430/456 (94%), Gaps = 11/456 (2%)
Strand = Plus / Plus
Query: 101 gcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgccgccgc 160
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 68 gcctccgccggatctcgtcggactcggatccgcccgacca------ccccgcgccgccgc 121
Query: 161 cgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcgg 220
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 122 -----agcagcagcagatcagagaagatggccgcagtcgacaccttcctcttcacctcgg 176
Query: 221 agtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctgg 280
|||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 177 agtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctgttcttg 236
Query: 281 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 296
Query: 341 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 356
Query: 401 tcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgacc 460
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 357 tcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgacc 416
Query: 461 actgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacg 520
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 417 actgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtgtgcacg 476
Query: 521 ggcacttcaccaagcgccccgaggagattggagctg 556
| ||||||||||||||||||||||||||||||||||
Sbjct: 477 gccacttcaccaagcgccccgaggagattggagctg 512
>gb|BE594385.1|BE594385 PI1_32_G11.b2_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 588
Score = 700 bits (353), Expect = 0.0
Identities = 430/456 (94%), Gaps = 11/456 (2%)
Strand = Plus / Plus
Query: 101 gcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgccgccgc 160
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 75 gcctccgccggatctcgtcggactcggatccgcccgacca------ccccgcgccgccgc 128
Query: 161 cgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcgg 220
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 129 -----agcagcagcagatcagagaagatggccgcagtcgacaccttcctcttcacctcgg 183
Query: 221 agtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctgg 280
|||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 184 agtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctgttcttg 243
Query: 281 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 303
Query: 341 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 363
Query: 401 tcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgacc 460
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 364 tcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgacc 423
Query: 461 actgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacg 520
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 424 actgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtgtgcacg 483
Query: 521 ggcacttcaccaagcgccccgaggagattggagctg 556
| ||||||||||||||||||||||||||||||||||
Sbjct: 484 gccacttcaccaagcgccccgaggagattggagctg 519
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gtcggatctgagacgagacgag 22
||||||||||||||||||||||
Sbjct: 9 gtcggatctgagacgagacgag 30
>gb|BE594579.1|BE594579 PI1_34_H11.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 609
Score = 700 bits (353), Expect = 0.0
Identities = 430/456 (94%), Gaps = 11/456 (2%)
Strand = Plus / Plus
Query: 101 gcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgccgccgc 160
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 78 gcctccgccggatctcgtcggactcggatccgcccgacca------ccccgcgccgccgc 131
Query: 161 cgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcgg 220
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 132 -----agcagcagcagatcagagaagatggccgcagtcgacaccttcctcttcacctcgg 186
Query: 221 agtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctgg 280
|||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 187 agtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctgttcttg 246
Query: 281 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 306
Query: 341 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 366
Query: 401 tcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgacc 460
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 367 tcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgacc 426
Query: 461 actgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacg 520
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 427 actgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtgtgcacg 486
Query: 521 ggcacttcaccaagcgccccgaggagattggagctg 556
| ||||||||||||||||||||||||||||||||||
Sbjct: 487 gccacttcaccaagcgccccgaggagattggagctg 522
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gtcggatctgagacgagacgag 22
||||||||||||||||||||||
Sbjct: 12 gtcggatctgagacgagacgag 33
>gb|BE597578.1|BE597578 PI1_71_D08.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 532
Score = 700 bits (353), Expect = 0.0
Identities = 430/456 (94%), Gaps = 11/456 (2%)
Strand = Plus / Plus
Query: 101 gcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgccgccgc 160
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 75 gcctccgccggatctcgtcggactcggatccgcccgacca------ccccgcgccgccgc 128
Query: 161 cgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcgg 220
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 129 -----agcagcagcagatcagagaagatggccgcagtcgacaccttcctcttcacctcgg 183
Query: 221 agtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctgg 280
|||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 184 agtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctgttcttg 243
Query: 281 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 303
Query: 341 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 363
Query: 401 tcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgacc 460
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 364 tcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgacc 423
Query: 461 actgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacg 520
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 424 actgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtgtgcacg 483
Query: 521 ggcacttcaccaagcgccccgaggagattggagctg 556
| ||||||||||||||||||||||||||||||||||
Sbjct: 484 gccacttcaccaagcgccccgaggagattggagctg 519
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gtcggatctgagacgagacgag 22
||||||||||||||||||||||
Sbjct: 9 gtcggatctgagacgagacgag 30
>gb|BG356093.1|BG356093 EM1_21_C10.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 589
Score = 700 bits (353), Expect = 0.0
Identities = 430/456 (94%), Gaps = 11/456 (2%)
Strand = Plus / Plus
Query: 101 gcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgccgccgc 160
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 79 gcctccgccggatctcgtcggactcggatccgcccgacca------ccccgcgccgccgc 132
Query: 161 cgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcgg 220
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 133 -----agcagcagcagatcagagaagatggccgcagtcgacaccttcctcttcacctcgg 187
Query: 221 agtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctgg 280
|||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 188 agtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctgttcttg 247
Query: 281 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 307
Query: 341 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 367
Query: 401 tcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgacc 460
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 368 tcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgacc 427
Query: 461 actgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacg 520
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 428 actgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtgtgcacg 487
Query: 521 ggcacttcaccaagcgccccgaggagattggagctg 556
| ||||||||||||||||||||||||||||||||||
Sbjct: 488 gccacttcaccaagcgccccgaggagattggagctg 523
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gtcggatctgagacgagacgag 22
||||||||||||||||||||||
Sbjct: 13 gtcggatctgagacgagacgag 34
>gb|BG462971.1|BG462971 EM1_46_H10.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 556
Score = 700 bits (353), Expect = 0.0
Identities = 430/456 (94%), Gaps = 11/456 (2%)
Strand = Plus / Plus
Query: 101 gcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgccgccgc 160
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 75 gcctccgccggatctcgtcggactcggatccgcccgacca------ccccgcgccgccgc 128
Query: 161 cgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcgg 220
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 129 -----agcagcagcagatcagagaagatggccgcagtcgacaccttcctcttcacctcgg 183
Query: 221 agtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctgg 280
|||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 184 agtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctgttcttg 243
Query: 281 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 303
Query: 341 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 363
Query: 401 tcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgacc 460
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 364 tcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgacc 423
Query: 461 actgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacg 520
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 424 actgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtgtgcacg 483
Query: 521 ggcacttcaccaagcgccccgaggagattggagctg 556
| ||||||||||||||||||||||||||||||||||
Sbjct: 484 gccacttcaccaagcgccccgaggagattggagctg 519
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gtcggatctgagacgagacgag 22
||||||||||||||||||||||
Sbjct: 9 gtcggatctgagacgagacgag 30
>gb|BG649727.1|BG649727 RHIZ2_82_H03.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 538
Score = 700 bits (353), Expect = 0.0
Identities = 430/456 (94%), Gaps = 11/456 (2%)
Strand = Plus / Plus
Query: 101 gcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgccgccgc 160
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 5 gcctccgccggatctcgtcggactcggatccgcccgacca------ccccgcgccgccgc 58
Query: 161 cgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcgg 220
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 59 -----agcagcagcagatcagagaagatggccgcagtcgacaccttcctcttcacctcgg 113
Query: 221 agtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctgg 280
|||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 114 agtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctgttcttg 173
Query: 281 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 233
Query: 341 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 293
Query: 401 tcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgacc 460
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 294 tcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgacc 353
Query: 461 actgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacg 520
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 354 actgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtgtgcacg 413
Query: 521 ggcacttcaccaagcgccccgaggagattggagctg 556
| ||||||||||||||||||||||||||||||||||
Sbjct: 414 gccacttcaccaagcgccccgaggagattggagctg 449
>gb|BM317563.1|BM317563 LG1_214_C09.b9_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 518
Score = 700 bits (353), Expect = 0.0
Identities = 430/456 (94%), Gaps = 11/456 (2%)
Strand = Plus / Plus
Query: 101 gcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgccgccgc 160
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 73 gcctccgccggatctcgtcggactcggatccgcccgacca------ccccgcgccgccgc 126
Query: 161 cgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcgg 220
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 127 -----agcagcagcagatcagagaagatggccgcagtcgacaccttcctcttcacctcgg 181
Query: 221 agtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctgg 280
|||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 182 agtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctgttcttg 241
Query: 281 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 301
Query: 341 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 361
Query: 401 tcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgacc 460
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 362 tcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgacc 421
Query: 461 actgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacg 520
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 422 actgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtgtgcacg 481
Query: 521 ggcacttcaccaagcgccccgaggagattggagctg 556
| ||||||||||||||||||||||||||||||||||
Sbjct: 482 gccacttcaccaagcgccccgaggagattggagctg 517
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 3 cggatctgagacgagacgag 22
||||||||||||||||||||
Sbjct: 9 cggatctgagacgagacgag 28
>gb|BM325476.1|BM325476 PIC1_45_A08.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 591
Score = 700 bits (353), Expect = 0.0
Identities = 430/456 (94%), Gaps = 11/456 (2%)
Strand = Plus / Plus
Query: 101 gcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgccgccgc 160
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 72 gcctccgccggatctcgtcggactcggatccgcccgacca------ccccgcgccgccgc 125
Query: 161 cgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcgg 220
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 126 -----agcagcagcagatcagagaagatggccgcagtcgacaccttcctcttcacctcgg 180
Query: 221 agtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctgg 280
|||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 181 agtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctgttcttg 240
Query: 281 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 300
Query: 341 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 360
Query: 401 tcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgacc 460
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 361 tcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgacc 420
Query: 461 actgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacg 520
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 421 actgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtgtgcacg 480
Query: 521 ggcacttcaccaagcgccccgaggagattggagctg 556
| ||||||||||||||||||||||||||||||||||
Sbjct: 481 gccacttcaccaagcgccccgaggagattggagctg 516
>gb|BM325843.1|BM325843 PIC1_53_E04.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 524
Score = 700 bits (353), Expect = 0.0
Identities = 430/456 (94%), Gaps = 11/456 (2%)
Strand = Plus / Plus
Query: 101 gcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgccgccgc 160
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 73 gcctccgccggatctcgtcggactcggatccgcccgacca------ccccgcgccgccgc 126
Query: 161 cgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcgg 220
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 127 -----agcagcagcagatcagagaagatggccgcagtcgacaccttcctcttcacctcgg 181
Query: 221 agtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctgg 280
|||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 182 agtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctgttcttg 241
Query: 281 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 301
Query: 341 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 361
Query: 401 tcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgacc 460
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 362 tcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgacc 421
Query: 461 actgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacg 520
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 422 actgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtgtgcacg 481
Query: 521 ggcacttcaccaagcgccccgaggagattggagctg 556
| ||||||||||||||||||||||||||||||||||
Sbjct: 482 gccacttcaccaagcgccccgaggagattggagctg 517
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 3 cggatctgagacgagacgag 22
||||||||||||||||||||
Sbjct: 9 cggatctgagacgagacgag 28
>gb|CD225621.1|CD225621 CCC1_40_C04.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_40_C04_A007 5', mRNA sequence
Length = 625
Score = 700 bits (353), Expect = 0.0
Identities = 430/456 (94%), Gaps = 11/456 (2%)
Strand = Plus / Plus
Query: 101 gcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgccgccgc 160
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 79 gcctccgccggatctcgtcggactcggatccgcccgacca------ccccgcgccgccgc 132
Query: 161 cgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcgg 220
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 133 -----agcagcagcagatcagagaagatggccgcagtcgacaccttcctcttcacctcgg 187
Query: 221 agtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctgg 280
|||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 188 agtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctgttcttg 247
Query: 281 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 307
Query: 341 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 367
Query: 401 tcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgacc 460
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 368 tcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgacc 427
Query: 461 actgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacg 520
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 428 actgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtgtgcacg 487
Query: 521 ggcacttcaccaagcgccccgaggagattggagctg 556
| ||||||||||||||||||||||||||||||||||
Sbjct: 488 gccacttcaccaagcgccccgaggagattggagctg 523
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gtcggatctgagacgagacgag 22
||||||||||||||||||||||
Sbjct: 13 gtcggatctgagacgagacgag 34
>gb|CD430434.1|CD430434 ETH1_18_E11.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_18_E11_A002 5', mRNA sequence
Length = 653
Score = 700 bits (353), Expect = 0.0
Identities = 430/456 (94%), Gaps = 11/456 (2%)
Strand = Plus / Plus
Query: 101 gcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgccgccgc 160
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 79 gcctccgccggatctcgtcggactcggatccgcccgacca------ccccgcgccgccgc 132
Query: 161 cgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcgg 220
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 133 -----agcagcagcagatcagagaagatggccgcagtcgacaccttcctcttcacctcgg 187
Query: 221 agtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctgg 280
|||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 188 agtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctgttcttg 247
Query: 281 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 307
Query: 341 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 367
Query: 401 tcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgacc 460
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 368 tcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgacc 427
Query: 461 actgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacg 520
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 428 actgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtgtgcacg 487
Query: 521 ggcacttcaccaagcgccccgaggagattggagctg 556
| ||||||||||||||||||||||||||||||||||
Sbjct: 488 gacacttcaccaagcgccccgaggagattggagctg 523
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gtcggatctgagacgagacgag 22
||||||||||||||||||||||
Sbjct: 13 gtcggatctgagacgagacgag 34
>gb|CF486633.1|CF486633 POL1_38_G10.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_38_G10_A002 5', mRNA sequence
Length = 684
Score = 700 bits (353), Expect = 0.0
Identities = 430/456 (94%), Gaps = 11/456 (2%)
Strand = Plus / Plus
Query: 101 gcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgccgccgc 160
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 9 gcctccgccggatctcgtcggactcggatccgcccgacca------ccccgcgccgccgc 62
Query: 161 cgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcgg 220
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 63 -----agcagcagcagatcagagaagatggccgcagtcgacaccttcctcttcacctcgg 117
Query: 221 agtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctgg 280
|||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 118 agtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctgttcttg 177
Query: 281 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 237
Query: 341 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 297
Query: 401 tcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgacc 460
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 298 tcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgacc 357
Query: 461 actgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacg 520
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 358 actgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtgtgcacg 417
Query: 521 ggcacttcaccaagcgccccgaggagattggagctg 556
| ||||||||||||||||||||||||||||||||||
Sbjct: 418 gccacttcaccaagcgccccgaggagattggagctg 453
>gb|CN129525.1|CN129525 RHOH1_35_H09.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_35_H09_A002 5', mRNA sequence
Length = 785
Score = 700 bits (353), Expect = 0.0
Identities = 430/456 (94%), Gaps = 11/456 (2%)
Strand = Plus / Plus
Query: 101 gcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgccgccgc 160
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 73 gcctccgccggatctcgtcggactcggatccgcccgacca------ccccgcgccgccgc 126
Query: 161 cgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcgg 220
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 127 -----agcagcagcagatcagagaagatggccgcagtcgacaccttcctcttcacctcgg 181
Query: 221 agtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctgg 280
|||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 182 agtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctgttcttg 241
Query: 281 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 301
Query: 341 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 361
Query: 401 tcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgacc 460
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 362 tcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgacc 421
Query: 461 actgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacg 520
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 422 actgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtgtgcacg 481
Query: 521 ggcacttcaccaagcgccccgaggagattggagctg 556
| ||||||||||||||||||||||||||||||||||
Sbjct: 482 gccacttcaccaagcgccccgaggagattggagctg 517
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gtcggatctgagacgagacgag 22
||||||||||||||||||||||
Sbjct: 7 gtcggatctgagacgagacgag 28
>gb|CN136390.1|CN136390 OX1_42_F05.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_42_F05_A002 5', mRNA sequence
Length = 913
Score = 700 bits (353), Expect = 0.0
Identities = 430/456 (94%), Gaps = 11/456 (2%)
Strand = Plus / Plus
Query: 101 gcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgccgccgc 160
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 73 gcctccgccggatctcgtcggactcggatccgcccgacca------ccccgcgccgccgc 126
Query: 161 cgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcgg 220
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 127 -----agcagcagcagatcagagaagatggccgcagtcgacaccttcctcttcacctcgg 181
Query: 221 agtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctgg 280
|||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 182 agtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctgttcttg 241
Query: 281 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 301
Query: 341 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 361
Query: 401 tcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgacc 460
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 362 tcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgacc 421
Query: 461 actgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacg 520
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 422 actgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtgtgcacg 481
Query: 521 ggcacttcaccaagcgccccgaggagattggagctg 556
| ||||||||||||||||||||||||||||||||||
Sbjct: 482 gccacttcaccaagcgccccgaggagattggagctg 517
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gtcggatctgagacgagacgag 22
||||||||||||||||||||||
Sbjct: 7 gtcggatctgagacgagacgag 28
>gb|CN140973.1|CN140973 OX1_48_C02.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_48_C02_A002 5', mRNA sequence
Length = 601
Score = 700 bits (353), Expect = 0.0
Identities = 430/456 (94%), Gaps = 11/456 (2%)
Strand = Plus / Plus
Query: 101 gcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgccgccgc 160
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 68 gcctccgccggatctcgtcggactcggatccgcccgacca------ccccgcgccgccgc 121
Query: 161 cgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcgg 220
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 122 -----agcagcagcagatcagagaagatggccgcagtcgacaccttcctcttcacctcgg 176
Query: 221 agtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctgg 280
|||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 177 agtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctgttcttg 236
Query: 281 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 296
Query: 341 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 356
Query: 401 tcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgacc 460
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 357 tcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgacc 416
Query: 461 actgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacg 520
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 417 actgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtgtgcacg 476
Query: 521 ggcacttcaccaagcgccccgaggagattggagctg 556
| ||||||||||||||||||||||||||||||||||
Sbjct: 477 gccacttcaccaagcgccccgaggagattggagctg 512
>gb|CX606362.1|CX606362 ANR1_2_D02.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_2_D02_A002 5', mRNA sequence
Length = 845
Score = 700 bits (353), Expect = 0.0
Identities = 430/456 (94%), Gaps = 11/456 (2%)
Strand = Plus / Plus
Query: 101 gcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgccgccgc 160
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 5 gcctccgccggatctcgtcggactcggatccgcccgacca------ccccgcgccgccgc 58
Query: 161 cgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcgg 220
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 59 -----agcagcagcagatcagagaagatggccgcagtcgacaccttcctcttcacctcgg 113
Query: 221 agtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctgg 280
|||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 114 agtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctgttcttg 173
Query: 281 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 233
Query: 341 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 293
Query: 401 tcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgacc 460
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 294 tcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgacc 353
Query: 461 actgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacg 520
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 354 actgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtgtgcacg 413
Query: 521 ggcacttcaccaagcgccccgaggagattggagctg 556
| ||||||||||||||||||||||||||||||||||
Sbjct: 414 gccacttcaccaagcgccccgaggagattggagctg 449
>gb|CX608420.1|CX608420 ANR1_38_B10.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_38_B10_A002 5', mRNA sequence
Length = 664
Score = 700 bits (353), Expect = 0.0
Identities = 430/456 (94%), Gaps = 11/456 (2%)
Strand = Plus / Plus
Query: 101 gcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgccgccgc 160
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 71 gcctccgccggatctcgtcggactcggatccgcccgacca------ccccgcgccgccgc 124
Query: 161 cgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcgg 220
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 125 -----agcagcagcagatcagagaagatggccgcagtcgacaccttcctcttcacctcgg 179
Query: 221 agtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctgg 280
|||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 180 agtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctgttcttg 239
Query: 281 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 299
Query: 341 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 359
Query: 401 tcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgacc 460
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 360 tcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgacc 419
Query: 461 actgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacg 520
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 420 actgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtgtgcacg 479
Query: 521 ggcacttcaccaagcgccccgaggagattggagctg 556
| ||||||||||||||||||||||||||||||||||
Sbjct: 480 gccacttcaccaagcgccccgaggagattggagctg 515
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gtcggatctgagacgagacgag 22
||||||||||||||||||||||
Sbjct: 5 gtcggatctgagacgagacgag 26
>gb|BE360694.1|BE360694 DG1_66_D11.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 571
Score = 692 bits (349), Expect = 0.0
Identities = 429/456 (94%), Gaps = 11/456 (2%)
Strand = Plus / Plus
Query: 101 gcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgccgccgc 160
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 75 gcctccgccggatctcgtcggactcggatccgcccgacca------ccccgcgccgccgc 128
Query: 161 cgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcgg 220
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 129 -----agcagcagcagatcagagaagatggccgcagtcgacaccttcctcttcacctcgg 183
Query: 221 agtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctgg 280
|||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 184 agtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctgttcttg 243
Query: 281 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 340
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 actcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 303
Query: 341 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 363
Query: 401 tcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgacc 460
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 364 tcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgacc 423
Query: 461 actgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacg 520
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 424 actgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtgtgcacg 483
Query: 521 ggcacttcaccaagcgccccgaggagattggagctg 556
| ||||||||||||||||||||||||||||||||||
Sbjct: 484 gccacttcaccaagcgccccgaggagattggagctg 519
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gtcggatctgagacgagacgag 22
||||||||||||||||||||||
Sbjct: 9 gtcggatctgagacgagacgag 30
>gb|CN140665.1|CN140665 OX1_45_G08.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_45_G08_A002 5', mRNA sequence
Length = 722
Score = 692 bits (349), Expect = 0.0
Identities = 429/456 (94%), Gaps = 11/456 (2%)
Strand = Plus / Plus
Query: 101 gcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgccgccgc 160
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 70 gcctccgccggatctcgtcggactcggatccgcccgacca------ccccgcgccgccgc 123
Query: 161 cgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcgg 220
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 124 -----agcagcagcagatcagagaagatggccgcagtcgacaccttcctcttcacctcgg 178
Query: 221 agtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctgg 280
|||| ||||| ||||||||||| ||| ||||||||||||||||||||||||||||||| |
Sbjct: 179 agtctgtgaatgagggacacccagacgagctctgcgaccaggtctcagatgctgttcttg 238
Query: 281 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 298
Query: 341 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 358
Query: 401 tcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgacc 460
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 359 tcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgacc 418
Query: 461 actgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacg 520
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 419 actgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtgtgcacg 478
Query: 521 ggcacttcaccaagcgccccgaggagattggagctg 556
| ||||||||||||||||||||||||||||||||||
Sbjct: 479 gccacttcaccaagcgccccgaggagattggagctg 514
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gtcggatctgagacgagacgag 22
||||||||||||||||||||||
Sbjct: 4 gtcggatctgagacgagacgag 25
>gb|CX607251.1|CX607251 ANR1_7_B10.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_7_B10_A002 5', mRNA sequence
Length = 752
Score = 692 bits (349), Expect = 0.0
Identities = 429/456 (94%), Gaps = 11/456 (2%)
Strand = Plus / Plus
Query: 101 gcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgccgccgc 160
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 73 gcctccgccggatctcgtcggactcggatccgcccgacca------ccccgcgccgccgc 126
Query: 161 cgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcgg 220
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 127 -----agcagcagcagatcagagaagatggccgcagtcgacaccttcctcttcacctcgg 181
Query: 221 agtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctgg 280
|||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 182 agtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctgttcttg 241
Query: 281 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 340
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 242 acgcttgccttgctgaggaccctgacggcaaggttgcttgcgagacctgcaccaagacca 301
Query: 341 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 361
Query: 401 tcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgacc 460
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 362 tcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgacc 421
Query: 461 actgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacg 520
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 422 actgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtgtgcacg 481
Query: 521 ggcacttcaccaagcgccccgaggagattggagctg 556
| ||||||||||||||||||||||||||||||||||
Sbjct: 482 gccacttcaccaagcgccccgaggagattggagctg 517
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gtcggatctgagacgagacgag 22
||||||||||||||||||||||
Sbjct: 7 gtcggatctgagacgagacgag 28
>gb|AW671493.1|AW671493 LG1_347_F07.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 548
Score = 688 bits (347), Expect = 0.0
Identities = 424/450 (94%), Gaps = 11/450 (2%)
Strand = Plus / Plus
Query: 107 gccggatctcgtcggactcggatccgcccgaccacgaccaccccccgccgccgccgcgca 166
|||||||||||||||||||||||||||||||||| |||| ||||||||| |
Sbjct: 8 gccggatctcgtcggactcggatccgcccgacca------ccccgcgccgccgc-----a 56
Query: 167 gcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcggagtccg 226
||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |
Sbjct: 57 gcagcagcagatcagagaagatggccgcagtcgacaccttcctcttcacctcggagtctg 116
Query: 227 tgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctggacgctt 286
|||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 117 tgaatgagggacacccagacaagctctgcgaccaggtctcagatgctgttcttgacgctt 176
Query: 287 gccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagaccaacatgg 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 gccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagaccaacatgg 236
Query: 347 tcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattgtcaggg 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 tcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattgtcaggg 296
Query: 407 agacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgaccactgca 466
|||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 297 agacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgaccactgca 356
Query: 467 aggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacgggcact 526
||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 357 aggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtgtgcacggccact 416
Query: 527 tcaccaagcgccccgaggagattggagctg 556
||||||||||||||||||||||||||||||
Sbjct: 417 tcaccaagcgccccgaggagattggagctg 446
>gb|CB925829.1|CB925829 ABA1_23_H03.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_23_H03_A012 5', mRNA sequence
Length = 659
Score = 686 bits (346), Expect = 0.0
Identities = 432/462 (93%), Gaps = 14/462 (3%)
Strand = Plus / Plus
Query: 95 cccgctgcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgc 154
||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 81 cccgccgcctccgccggatctcgtcggactcggatccgccc------gaccaccccgcgc 134
Query: 155 cgccgccgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttca 214
|||||| ||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 135 cgccgc--------agcagcagatcagagaagatggccgcagtcgacaccttcctcttca 186
Query: 215 cctcggagtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctg 274
|||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 187 cctcggagtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctg 246
Query: 275 ttctggacgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcacca 334
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ttcttgacgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcacca 306
Query: 335 agaccaacatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgaga 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 agaccaacatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgaga 366
Query: 395 agattgtcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacg 454
|||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 367 agattgtcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacg 426
Query: 455 ctgaccactgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtg 514
||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 427 ctgaccactgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtg 486
Query: 515 tgcacgggcacttcaccaagcgccccgaggagattggagctg 556
||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 487 tgcacggccacttcaccaagcgccccgaggagattggagctg 528
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gtcggatctgagacgagacgag 22
||||||||||||||||||||||
Sbjct: 13 gtcggatctgagacgagacgag 34
>gb|CD204033.1|CD204033 HS1_3_D04.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_3_D04_A012 5', mRNA sequence
Length = 613
Score = 686 bits (346), Expect = 0.0
Identities = 432/462 (93%), Gaps = 14/462 (3%)
Strand = Plus / Plus
Query: 95 cccgctgcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgc 154
||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 84 cccgccgcctccgccggatctcgtcggactcggatccgccc------gaccaccccgcgc 137
Query: 155 cgccgccgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttca 214
|||||| ||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 138 cgccgc--------agcagcagatcagagaagatggccgcagtcgacaccttcctcttca 189
Query: 215 cctcggagtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctg 274
|||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 190 cctcggagtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctg 249
Query: 275 ttctggacgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcacca 334
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ttcttgacgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcacca 309
Query: 335 agaccaacatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgaga 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 agaccaacatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgaga 369
Query: 395 agattgtcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacg 454
|||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 370 agattgtcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacg 429
Query: 455 ctgaccactgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtg 514
||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 430 ctgaccactgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtg 489
Query: 515 tgcacgggcacttcaccaagcgccccgaggagattggagctg 556
||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 490 tgcacggccacttcaccaagcgccccgaggagattggagctg 531
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gtcggatctgagacgagacgag 22
||||||||||||||||||||||
Sbjct: 16 gtcggatctgagacgagacgag 37
>gb|CD204888.1|CD204888 HS1_10_G03.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_10_G03_A012 5', mRNA sequence
Length = 582
Score = 686 bits (346), Expect = 0.0
Identities = 432/462 (93%), Gaps = 14/462 (3%)
Strand = Plus / Plus
Query: 95 cccgctgcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgc 154
||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 4 cccgccgcctccgccggatctcgtcggactcggatccgccc------gaccaccccgcgc 57
Query: 155 cgccgccgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttca 214
|||||| ||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 58 cgccgc--------agcagcagatcagagaagatggccgcagtcgacaccttcctcttca 109
Query: 215 cctcggagtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctg 274
|||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 110 cctcggagtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctg 169
Query: 275 ttctggacgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcacca 334
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 ttcttgacgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcacca 229
Query: 335 agaccaacatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgaga 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 agaccaacatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgaga 289
Query: 395 agattgtcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacg 454
|||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 290 agattgtcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacg 349
Query: 455 ctgaccactgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtg 514
||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 350 ctgaccactgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtg 409
Query: 515 tgcacgggcacttcaccaagcgccccgaggagattggagctg 556
||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 410 tgcacggccacttcaccaagcgccccgaggagattggagctg 451
>gb|CD204925.1|CD204925 HS1_10_D06.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_10_D06_A012 5', mRNA sequence
Length = 652
Score = 686 bits (346), Expect = 0.0
Identities = 432/462 (93%), Gaps = 14/462 (3%)
Strand = Plus / Plus
Query: 95 cccgctgcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgc 154
||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 84 cccgccgcctccgccggatctcgtcggactcggatccgccc------gaccaccccgcgc 137
Query: 155 cgccgccgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttca 214
|||||| ||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 138 cgccgc--------agcagcagatcagagaagatggccgcagtcgacaccttcctcttca 189
Query: 215 cctcggagtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctg 274
|||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 190 cctcggagtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctg 249
Query: 275 ttctggacgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcacca 334
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ttcttgacgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcacca 309
Query: 335 agaccaacatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgaga 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 agaccaacatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgaga 369
Query: 395 agattgtcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacg 454
|||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 370 agattgtcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacg 429
Query: 455 ctgaccactgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtg 514
||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 430 ctgaccactgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtg 489
Query: 515 tgcacgggcacttcaccaagcgccccgaggagattggagctg 556
||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 490 tgcacggccacttcaccaagcgccccgaggagattggagctg 531
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gtcggatctgagacgagacgag 22
||||||||||||||||||||||
Sbjct: 16 gtcggatctgagacgagacgag 37
>gb|CD209747.1|CD209747 HS1_54_E01.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_54_E01_A012 5', mRNA sequence
Length = 554
Score = 686 bits (346), Expect = 0.0
Identities = 432/462 (93%), Gaps = 14/462 (3%)
Strand = Plus / Plus
Query: 95 cccgctgcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgc 154
||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 26 cccgccgcctccgccggatctcgtcggactcggatccgccc------gaccaccccgcgc 79
Query: 155 cgccgccgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttca 214
|||||| ||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 80 cgccgc--------agcagcagatcagagaagatggccgcagtcgacaccttcctcttca 131
Query: 215 cctcggagtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctg 274
|||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 132 cctcggagtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctg 191
Query: 275 ttctggacgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcacca 334
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 ttcttgacgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcacca 251
Query: 335 agaccaacatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgaga 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 agaccaacatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgaga 311
Query: 395 agattgtcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacg 454
|||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 312 agattgtcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacg 371
Query: 455 ctgaccactgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtg 514
||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 372 ctgaccactgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtg 431
Query: 515 tgcacgggcacttcaccaagcgccccgaggagattggagctg 556
||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 432 tgcacggccacttcaccaagcgccccgaggagattggagctg 473
>gb|CD231037.1|CD231037 SS1_7_G07.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_7_G07_A012 5', mRNA sequence
Length = 610
Score = 686 bits (346), Expect = 0.0
Identities = 432/462 (93%), Gaps = 14/462 (3%)
Strand = Plus / Plus
Query: 95 cccgctgcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgc 154
||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 82 cccgccgcctccgccggatctcgtcggactcggatccgccc------gaccaccccgcgc 135
Query: 155 cgccgccgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttca 214
|||||| ||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 136 cgccgc--------agcagcagatcagagaagatggccgcagtcgacaccttcctcttca 187
Query: 215 cctcggagtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctg 274
|||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 188 cctcggagtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctg 247
Query: 275 ttctggacgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcacca 334
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ttcttgacgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcacca 307
Query: 335 agaccaacatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgaga 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 agaccaacatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgaga 367
Query: 395 agattgtcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacg 454
|||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 368 agattgtcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacg 427
Query: 455 ctgaccactgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtg 514
||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 428 ctgaccactgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtg 487
Query: 515 tgcacgggcacttcaccaagcgccccgaggagattggagctg 556
||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 488 tgcacggccacttcaccaagcgccccgaggagattggagctg 529
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gtcggatctgagacgagacgag 22
||||||||||||||||||||||
Sbjct: 14 gtcggatctgagacgagacgag 35
>gb|CD232482.1|CD232482 SS1_45_G04.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_45_G04_A012 5', mRNA sequence
Length = 591
Score = 686 bits (346), Expect = 0.0
Identities = 432/462 (93%), Gaps = 14/462 (3%)
Strand = Plus / Plus
Query: 95 cccgctgcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgc 154
||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 86 cccgccgcctccgccggatctcgtcggactcggatccgccc------gaccaccccgcgc 139
Query: 155 cgccgccgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttca 214
|||||| ||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 140 cgccgc--------agcagcagatcagagaagatggccgcagtcgacaccttcctcttca 191
Query: 215 cctcggagtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctg 274
|||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 192 cctcggagtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctg 251
Query: 275 ttctggacgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcacca 334
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ttcttgacgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcacca 311
Query: 335 agaccaacatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgaga 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 agaccaacatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgaga 371
Query: 395 agattgtcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacg 454
|||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 372 agattgtcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacg 431
Query: 455 ctgaccactgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtg 514
||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 432 ctgaccactgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtg 491
Query: 515 tgcacgggcacttcaccaagcgccccgaggagattggagctg 556
||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 492 tgcacggccacttcaccaagcgccccgaggagattggagctg 533
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gtcggatctgagacgagacgag 22
||||||||||||||||||||||
Sbjct: 18 gtcggatctgagacgagacgag 39
>gb|CX612317.1|CX612317 GABR1_1_F05.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_1_F05_A002 5', mRNA sequence
Length = 687
Score = 684 bits (345), Expect = 0.0
Identities = 428/456 (93%), Gaps = 11/456 (2%)
Strand = Plus / Plus
Query: 101 gcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgccgccgc 160
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 76 gcctccgccggatctcgtcggactcggatccgcccgacca------ccccgcgccgccgc 129
Query: 161 cgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcgg 220
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 130 -----agcagcagcagatcagagaagatggccgcagtcgacaccttcctcttcacctcgg 184
Query: 221 agtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctgg 280
|||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 185 agtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctgttcttg 244
Query: 281 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 340
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 245 acgcttgccttgctgaggaccctgacagcgaggttgcttgcgagacctgcaccaagacca 304
Query: 341 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 400
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 atatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 364
Query: 401 tcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgacc 460
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 365 tcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgacc 424
Query: 461 actgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacg 520
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 425 actgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtgtgcacg 484
Query: 521 ggcacttcaccaagcgccccgaggagattggagctg 556
| ||||||||||||||||||||||||||||||||||
Sbjct: 485 gccacttcaccaagcgccccgaggagattggagctg 520
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gtcggatctgagacgagacgag 22
||||||||||||||||||||||
Sbjct: 10 gtcggatctgagacgagacgag 31
>gb|CX612501.1|CX612501 GABR1_2_F11.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_2_F11_A002 5', mRNA sequence
Length = 737
Score = 684 bits (345), Expect = 0.0
Identities = 428/456 (93%), Gaps = 11/456 (2%)
Strand = Plus / Plus
Query: 101 gcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgccgccgc 160
||||||||||| |||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 73 gcctccgccgggtctcgtcggactcggatccgcccgacca------ccccgcgccgccgc 126
Query: 161 cgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcgg 220
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 127 -----agcagcagcagatcagagaagatggccgcagtcgacaccttcctcttcacctcgg 181
Query: 221 agtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctgg 280
|||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 182 agtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctgttcttg 241
Query: 281 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 340
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 acgctggccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 301
Query: 341 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 361
Query: 401 tcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgacc 460
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 362 tcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgacc 421
Query: 461 actgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacg 520
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 422 actgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtgtgcacg 481
Query: 521 ggcacttcaccaagcgccccgaggagattggagctg 556
| ||||||||||||||||||||||||||||||||||
Sbjct: 482 gccacttcaccaagcgccccgaggagattggagctg 517
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gtcggatctgagacgagacgag 22
||||||||||||||||||||||
Sbjct: 7 gtcggatctgagacgagacgag 28
>gb|BE125028.1|BE125028 DG1_14_B11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 495
Score = 682 bits (344), Expect = 0.0
Identities = 421/447 (94%), Gaps = 11/447 (2%)
Strand = Plus / Plus
Query: 101 gcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgccgccgc 160
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 60 gcctccgccggatctcgtcggactcggatccgcccgacca------ccccgcgccgccgc 113
Query: 161 cgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcgg 220
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 114 -----agcagcagcagatcagagaagatggccgcagtcgacaccttcctcttcacctcgg 168
Query: 221 agtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctgg 280
|||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 169 agtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctgttcttg 228
Query: 281 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 288
Query: 341 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 348
Query: 401 tcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgacc 460
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 349 tcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgacc 408
Query: 461 actgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacg 520
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 409 actgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtgtgcacg 468
Query: 521 ggcacttcaccaagcgccccgaggaga 547
| |||||||||||||||||||||||||
Sbjct: 469 gccacttcaccaagcgccccgaggaga 495
>gb|CN142711.1|CN142711 WOUND1_11_E10.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_11_E10_A002 5', mRNA sequence
Length = 695
Score = 678 bits (342), Expect = 0.0
Identities = 429/457 (93%), Gaps = 12/457 (2%)
Strand = Plus / Plus
Query: 101 gcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgccgccgc 160
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 22 gcctccgccggatctcgtcggactcggatccgcccgacca------ccccgcgccgccgc 75
Query: 161 cgcgcagcagcagcagatcag-agaagatggccggactcgacaccttcctcttcacctcg 219
||||||||||||||| |||||||||||| | |||||||||||||||||||||||
Sbjct: 76 -----agcagcagcagatcattagaagatggccgcagtcgacaccttcctcttcacctcg 130
Query: 220 gagtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctg 279
||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 131 gagtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctgttctt 190
Query: 280 gacgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacc 339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 gacgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacc 250
Query: 340 aacatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagatt 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 aacatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagatt 310
Query: 400 gtcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgac 459
||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 311 gtcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgac 370
Query: 460 cactgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcac 519
|||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 371 cactgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtgtgcac 430
Query: 520 gggcacttcaccaagcgccccgaggagattggagctg 556
|| ||||||||||||||||||||||||||||||||||
Sbjct: 431 ggccacttcaccaagcgccccgaggagattggagctg 467
>gb|BE919103.1|BE919103 FM1_3_B09.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 502
Score = 670 bits (338), Expect = 0.0
Identities = 415/441 (94%), Gaps = 11/441 (2%)
Strand = Plus / Plus
Query: 101 gcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgccgccgc 160
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 66 gcctccgccggatctcgtcggactcggatccgcccgacca------ccccgcgccgccgc 119
Query: 161 cgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcgg 220
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 120 -----agcagcagcagatcagagaagatggccgcagtcgacaccttcctcttcacctcgg 174
Query: 221 agtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctgg 280
|||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 175 agtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctgttcttg 234
Query: 281 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 294
Query: 341 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 354
Query: 401 tcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgacc 460
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 355 tcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgacc 414
Query: 461 actgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacg 520
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 415 actgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtgtgcacg 474
Query: 521 ggcacttcaccaagcgccccg 541
| |||||||||||||||||||
Sbjct: 475 gccacttcaccaagcgccccg 495
>gb|BG463259.1|BG463259 EM1_48_D04.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 488
Score = 670 bits (338), Expect = 0.0
Identities = 380/394 (96%)
Strand = Plus / Plus
Query: 163 cgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcggag 222
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 38 cgcagcagcagcagatcagagaagatggccgcagtcgacaccttcctcttcacctcggag 97
Query: 223 tccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctggac 282
|| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 98 tctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctgttcttgac 157
Query: 283 gcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagaccaac 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 gcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagaccaac 217
Query: 343 atggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattgtc 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 atggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattgtc 277
Query: 403 agggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgaccac 462
|||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 278 agggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgaccac 337
Query: 463 tgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacggg 522
||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 338 tgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtgtgcacggc 397
Query: 523 cacttcaccaagcgccccgaggagattggagctg 556
||||||||||||||||||||||||||||||||||
Sbjct: 398 cacttcaccaagcgccccgaggagattggagctg 431
>gb|BI098351.1|BI098351 IP1_31_C11.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 557
Score = 670 bits (338), Expect = 0.0
Identities = 380/394 (96%)
Strand = Plus / Plus
Query: 163 cgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcggag 222
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 25 cgcagcagcagcagatcagagaagatggccgcagtcgacaccttcctcttcacctcggag 84
Query: 223 tccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctggac 282
|| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 85 tctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctgttcttgac 144
Query: 283 gcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagaccaac 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 gcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagaccaac 204
Query: 343 atggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattgtc 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 atggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattgtc 264
Query: 403 agggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgaccac 462
|||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 265 agggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgaccac 324
Query: 463 tgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacggg 522
||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 325 tgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtgtgcacggc 384
Query: 523 cacttcaccaagcgccccgaggagattggagctg 556
||||||||||||||||||||||||||||||||||
Sbjct: 385 cacttcaccaagcgccccgaggagattggagctg 418
>gb|BE598900.1|BE598900 PI1_83_A11.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 501
Score = 668 bits (337), Expect = 0.0
Identities = 414/440 (94%), Gaps = 11/440 (2%)
Strand = Plus / Plus
Query: 101 gcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgccgccgc 160
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 73 gcctccgccggatctcgtcggactcggatccgcccgacca------ccccgcgccgccgc 126
Query: 161 cgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcgg 220
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 127 -----agcagcagcagatcagagaagatggccgcagtcgacaccttcctcttcacctcgg 181
Query: 221 agtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctgg 280
|||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 182 agtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctgttcttg 241
Query: 281 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 301
Query: 341 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 361
Query: 401 tcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgacc 460
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 362 tcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgacc 421
Query: 461 actgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacg 520
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 422 actgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtgtgcacg 481
Query: 521 ggcacttcaccaagcgcccc 540
| ||||||||||||||||||
Sbjct: 482 gccacttcaccaagcgcccc 501
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 3 cggatctgagacgagacgag 22
||||||||||||||||||||
Sbjct: 9 cggatctgagacgagacgag 28
>gb|CX613354.1|CX613354 GABR1_7_E06.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_7_E06_A002 5', mRNA sequence
Length = 712
Score = 668 bits (337), Expect = 0.0
Identities = 426/456 (93%), Gaps = 11/456 (2%)
Strand = Plus / Plus
Query: 101 gcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgccgccgc 160
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 76 gcctccgccggatctcgtcggactcggatccgcccgacca------ccccgcgccgccgc 129
Query: 161 cgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcgg 220
||||||||| |||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 130 -----agcagcagcggatcagagaagatggccgcagtcgacaccttcctcttcacctcgg 184
Query: 221 agtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctgg 280
|||| ||||| ||||||||||| ||||||||||||||||||||||||||||||| ||| |
Sbjct: 185 agtctgtgaaagagggacacccagacaagctctgcgaccaggtctcagatgctggtcttg 244
Query: 281 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 340
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 acgcttgcctggctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 304
Query: 341 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 364
Query: 401 tcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgacc 460
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 365 tcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgacc 424
Query: 461 actgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacg 520
||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 425 actgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctgagggtgtgcacg 484
Query: 521 ggcacttcaccaagcgccccgaggagattggagctg 556
| ||||||||||||||||||||||||||||||||||
Sbjct: 485 gccacttcaccaagcgccccgaggagattggagctg 520
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gtcggatctgagacgagacgag 22
||||||||||||||||||||||
Sbjct: 10 gtcggatctgagacgagacgag 31
>gb|CX615658.1|CX615658 GABR1_21_C07.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_21_C07_A002 5', mRNA sequence
Length = 740
Score = 668 bits (337), Expect = 0.0
Identities = 426/456 (93%), Gaps = 11/456 (2%)
Strand = Plus / Plus
Query: 101 gcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgccgccgc 160
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 73 gcctccgccggatctcgtcggactcggatccgcccgacca------ccccgcgccgccgc 126
Query: 161 cgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcgg 220
|||||||||||||||||||||||||||| | ||||||||||||||| | ||||||
Sbjct: 127 -----agcagcagcagatcagagaagatggccgcagtcgacaccttcctctgcgcctcgg 181
Query: 221 agtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctgg 280
|||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 182 agtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctgttcttg 241
Query: 281 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 340
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 242 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcgccaagacca 301
Query: 341 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 361
Query: 401 tcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgacc 460
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 362 tcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgacc 421
Query: 461 actgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacg 520
||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 422 actgcaaggtgcttgtgaacattgagcagcagtctccggatattgctcagggtgtgcacg 481
Query: 521 ggcacttcaccaagcgccccgaggagattggagctg 556
| ||||||||||||||||||||||||||||||||||
Sbjct: 482 gccacttcaccaagcgccccgaggagattggagctg 517
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gtcggatctgagacgagacgag 22
||||||||||||||||||||||
Sbjct: 7 gtcggatctgagacgagacgag 28
>gb|BG357819.1|BG357819 OV2_30_F09.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 476
Score = 662 bits (334), Expect = 0.0
Identities = 379/394 (96%)
Strand = Plus / Plus
Query: 163 cgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcggag 222
||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||
Sbjct: 16 cgcagcagcagcagatcagagaagatggccgcagtcgacaccttcctgttcacctcggag 75
Query: 223 tccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctggac 282
|| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 76 tctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctgttcttgac 135
Query: 283 gcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagaccaac 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 gcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagaccaac 195
Query: 343 atggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattgtc 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 atggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattgtc 255
Query: 403 agggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgaccac 462
|||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 256 agggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgaccac 315
Query: 463 tgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacggg 522
||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 316 tgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtgtgcacggc 375
Query: 523 cacttcaccaagcgccccgaggagattggagctg 556
||||||||||||||||||||||||||||||||||
Sbjct: 376 cacttcaccaagcgccccgaggagattggagctg 409
>gb|CD236323.1|CD236323 SS1_33_F06.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_33_F06_A012 5', mRNA sequence
Length = 519
Score = 662 bits (334), Expect = 0.0
Identities = 424/456 (92%), Gaps = 14/456 (3%)
Strand = Plus / Plus
Query: 95 cccgctgcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgc 154
||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 78 cccgccgcctccgccggatctcgtcggactcggatccgccc------gaccaccccgcgc 131
Query: 155 cgccgccgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttca 214
|||||| ||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 132 cgccgc--------agcagcagatcagagaagatggccgcagtcgacaccttcctcttca 183
Query: 215 cctcggagtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctg 274
|||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 184 cctcggagtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctg 243
Query: 275 ttctggacgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcacca 334
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ttcttgacgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcacca 303
Query: 335 agaccaacatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgaga 394
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 304 agaccaacatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacnana 363
Query: 395 agattgtcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacg 454
|||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 364 agattgtcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacg 423
Query: 455 ctgaccactgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtg 514
||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 424 ctgaccactgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtg 483
Query: 515 tgcacgggcacttcaccaagcgccccgaggagattg 550
||||||| ||||||||||||||||||||||||||||
Sbjct: 484 tgcacggccacttcaccaagcgccccgaggagattg 519
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gtcggatctgagacgagacgag 22
||||||||||||||||||||||
Sbjct: 10 gtcggatctgagacgagacgag 31
>gb|CF488723.1|CF488723 POL1_51_F11.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_51_F11_A002 5', mRNA sequence
Length = 737
Score = 662 bits (334), Expect = 0.0
Identities = 379/394 (96%)
Strand = Plus / Plus
Query: 163 cgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcggag 222
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 29 cgcagcagcagcagatcagagaagatggccgcagtcgacaccttcctcttcacctcggag 88
Query: 223 tccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctggac 282
|| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 89 tctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctgttcttgac 148
Query: 283 gcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagaccaac 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 gcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagaccaac 208
Query: 343 atggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattgtc 402
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 209 atggtcatggtctttggtgagatcaccaccaaggcctatgtcgactacgagaagattgtc 268
Query: 403 agggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgaccac 462
|||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 269 agggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgaccac 328
Query: 463 tgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacggg 522
||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 329 tgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtgtgcacggc 388
Query: 523 cacttcaccaagcgccccgaggagattggagctg 556
||||||||||||||||||||||||||||||||||
Sbjct: 389 cacttcaccaagcgccccgaggagattggagctg 422
>gb|CX614030.1|CX614030 GABR1_11_D09.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_11_D09_A002 5', mRNA sequence
Length = 727
Score = 660 bits (333), Expect = 0.0
Identities = 425/456 (93%), Gaps = 11/456 (2%)
Strand = Plus / Plus
Query: 101 gcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgccgccgc 160
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 78 gcctccgccggatctcgtcggactcggatccgcccgacca------ccccgcgccgccgc 131
Query: 161 cgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcgg 220
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 132 -----agcagcagcagatcagagaagatggccgcagtcgacaccttcctcttcacctcgg 186
Query: 221 agtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctgg 280
|||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 187 agtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctgttcttg 246
Query: 281 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 340
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 247 acgcttgccttgctgaggaccctgacagcggggttgcttgcgagacctgcaccaagacca 306
Query: 341 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 400
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 307 acatggtcatggtctttggtgagatcaccgccaaggccaatgtcgactacgagaagattg 366
Query: 401 tcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgacc 460
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 367 tcagggagacctgccgcaacattggtttcgtgtcagctaatgtcgggcttgacgctgacc 426
Query: 461 actgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacg 520
||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 427 actgcaaggtgctcgtgaacattgagcagcagtctcctgatattgctcagggtgtgcacg 486
Query: 521 ggcacttcaccaagcgccccgaggagattggagctg 556
| ||||||||||||||||||||||||||||||||||
Sbjct: 487 gccacttcaccaagcgccccgaggagattggagctg 522
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gtcggatctgagacgagacgag 22
||||||||||||||||||||||
Sbjct: 12 gtcggatctgagacgagacgag 33
>gb|CF487407.1|CF487407 POL1_43_D02.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_43_D02_A002 5', mRNA sequence
Length = 652
Score = 658 bits (332), Expect = 0.0
Identities = 409/435 (94%), Gaps = 11/435 (2%)
Strand = Plus / Plus
Query: 101 gcctccgccggatctcgtcggactcggatccgcccgaccacgaccaccccccgccgccgc 160
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 28 gcctccgccggatctcgtcggactcggatccgcccgacca------ccccgcgccgccgc 81
Query: 161 cgcgcagcagcagcagatcagagaagatggccggactcgacaccttcctcttcacctcgg 220
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 82 -----agcagcagcagatcagagaagatggccgcagtcgacaccttcctcttcacctcgg 136
Query: 221 agtccgtgaacgagggacaccctgacaagctctgcgaccaggtctcagatgctgttctgg 280
|||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 137 agtctgtgaatgagggacacccagacaagctctgcgaccaggtctcagatgctgttcttg 196
Query: 281 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 acgcttgccttgctgaggaccctgacagcaaggttgcttgcgagacctgcaccaagacca 256
Query: 341 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 acatggtcatggtctttggtgagatcaccaccaaggccaatgtcgactacgagaagattg 316
Query: 401 tcagggagacatgccgcaacattggtttcgtgtcgaacgatgtcgggcttgacgctgacc 460
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 317 tcagggagacctgccgcaacattggtttcgtgtcagctgatgtcgggcttgacgctgacc 376
Query: 461 actgcaaggtgcttgggaacattgagcagcagtcccctgatattgctcagggtgtgcacg 520
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 377 actgcaaggtgcttgtgaacattgagcagcagtctcctgatattgctcagggtgtgcacg 436
Query: 521 ggcacttcaccaagc 535
| |||||||||||||
Sbjct: 437 gccacttcaccaagc 451
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 315,693
Number of Sequences: 832831
Number of extensions: 315693
Number of successful extensions: 143494
Number of sequences better than 0.5: 220
Number of HSP's better than 0.5 without gapping: 215
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 142857
Number of HSP's gapped (non-prelim): 496
length of query: 556
length of database: 491,359,669
effective HSP length: 19
effective length of query: 537
effective length of database: 475,535,880
effective search space: 255362767560
effective search space used: 255362767560
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)