BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2404800.2.1
(1228 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN148282.1|CN148282 WOUND1_55_G06.b1_A002 Wounded leaves... 817 0.0
gb|CN148351.1|CN148351 WOUND1_55_G06.g1_A002 Wounded leaves... 753 0.0
gb|CN151625.1|CN151625 WOUND1_76_C11.g1_A002 Wounded leaves... 726 0.0
gb|BG102714.1|BG102714 RHIZ2_36_D11.g1_A003 Rhizome2 (RHIZ2... 722 0.0
gb|CN150569.1|CN150569 WOUND1_70_C05.b1_A002 Wounded leaves... 696 0.0
gb|CN150641.1|CN150641 WOUND1_70_C05.g1_A002 Wounded leaves... 640 0.0
gb|CN144191.1|CN144191 WOUND1_20_E12.g1_A002 Wounded leaves... 577 e-163
gb|CN151544.1|CN151544 WOUND1_76_C11.b1_A002 Wounded leaves... 551 e-155
gb|CW404976.1|CW404976 fsbb001f097f17f0 Sorghum methylation... 541 e-152
gb|CN144107.1|CN144107 WOUND1_20_E12.b1_A002 Wounded leaves... 504 e-140
gb|CW404977.1|CW404977 fsbb001f097f17k0 Sorghum methylation... 490 e-136
gb|BG052711.1|BG052711 RHIZ2_28_G08.g1_A003 Rhizome2 (RHIZ2... 426 e-117
gb|BG103046.1|BG103046 RHIZ2_36_D11.b1_A003 Rhizome2 (RHIZ2... 420 e-115
gb|CW245145.1|CW245145 104_706_11220910_116_35081_093 Sorgh... 416 e-114
gb|CW245147.1|CW245147 104_706_11220910_148_35077_093 Sorgh... 416 e-114
gb|AW677158.1|AW677158 DG1_5_C12.b1_A002 Dark Grown 1 (DG1)... 394 e-108
gb|CW245148.1|CW245148 104_706_11220910_148_37599_093 Sorgh... 387 e-105
gb|BG159154.1|BG159154 RHIZ2_28_G08.b1_A003 Rhizome2 (RHIZ2... 274 2e-071
gb|CW108984.1|CW108984 104_480_11097815_116_34493_082 Sorgh... 240 3e-061
gb|CN151846.1|CN151846 WOUND1_78_C02.b1_A002 Wounded leaves... 234 2e-059
gb|CW332999.1|CW332999 104_830_11481709_116_36036_049 Sorgh... 226 4e-057
gb|CN148575.1|CN148575 WOUND1_57_A09.g1_A002 Wounded leaves... 204 1e-050
gb|CD235375.1|CD235375 SS1_29_H10.b1_A012 Salt-stressed see... 192 5e-047
gb|BG558734.1|BG558734 RHIZ2_59_G10.g1_A003 Rhizome2 (RHIZ2... 155 1e-035
gb|CW125845.1|CW125845 104_506_11112559_116_34722_028 Sorgh... 153 5e-035
gb|CF433158.1|CF433158 NIT1_25_E08.b1_A002 Nitrogen-deficie... 145 1e-032
gb|CN150866.1|CN150866 WOUND1_72_A06.b1_A002 Wounded leaves... 143 4e-032
gb|AI723825.1|AI723825 RHIZ1_12_H04.y1_A001 Rhizome1 (RHIZ1... 127 3e-027
gb|CN151920.1|CN151920 WOUND1_78_C02.g1_A002 Wounded leaves... 125 1e-026
gb|CW192117.1|CW192117 104_614_11178853_148_36948_057 Sorgh... 121 2e-025
gb|CW209941.1|CW209941 104_640_11189528_148_36995_028 Sorgh... 121 2e-025
gb|CW347988.1|CW347988 fsbb001f008c13f0 Sorghum methylation... 121 2e-025
gb|CF433215.1|CF433215 NIT1_25_E08.g1_A002 Nitrogen-deficie... 119 6e-025
gb|CW108985.1|CW108985 104_480_11097815_148_34497_082 Sorgh... 115 1e-023
gb|CX606124.1|CX606124 ANR1_1_F10.b1_A002 Anaerobic roots S... 115 1e-023
gb|CW097149.1|CW097149 104_463_11002295_116_34344_094 Sorgh... 111 2e-022
gb|CW364958.1|CW364958 fsbb001f037d22f0 Sorghum methylation... 111 2e-022
gb|CF431162.1|CF431162 NIT1_6_C08.b1_A002 Nitrogen-deficien... 111 2e-022
gb|CX607042.1|CX607042 ANR1_6_H06.b1_A002 Anaerobic roots S... 111 2e-022
gb|CN146677.1|CN146677 WOUND1_43_B07.b1_A002 Wounded leaves... 109 6e-022
gb|BZ338208.1|BZ338208 ia93g08.g1 WGS-SbicolorF (JM107 adap... 105 1e-020
gb|CW092078.1|CW092078 104_454_10998930_116_33041_073 Sorgh... 105 1e-020
gb|CW128167.1|CW128167 104_509_11113857_148_34750_037 Sorgh... 105 1e-020
gb|CW473754.1|CW473754 fsbb001f229e09k0 Sorghum methylation... 105 1e-020
gb|AI724512.1|AI724512 RHIZ1_37_C02.y1_A001 Rhizome1 (RHIZ1... 105 1e-020
gb|CN135321.1|CN135321 OX1_32_B07.b1_A002 Oxidatively-stres... 105 1e-020
gb|CN151211.1|CN151211 WOUND1_74_C10.b1_A002 Wounded leaves... 105 1e-020
gb|CN149045.1|CN149045 WOUND1_60_H10.b1_A002 Wounded leaves... 103 4e-020
gb|CL152122.1|CL152122 104_335_10779735_116_31364_135 Sorgh... 101 1e-019
gb|CL152965.1|CL152965 104_337_10780377_116_31368_009 Sorgh... 101 1e-019
gb|CW124854.1|CW124854 104_504_11112012_116_34706_034 Sorgh... 101 1e-019
gb|CW255681.1|CW255681 104_720_11226371_148_35403_042 Sorgh... 101 1e-019
gb|AW923055.1|AW923055 DG1_48_G01.g1_A002 Dark Grown 1 (DG1... 101 1e-019
gb|BF421814.1|BF421814 FM1_11_C04.g1_A003 Floral-Induced Me... 101 1e-019
gb|CD234204.1|CD234204 SS1_26_B02.b1_A012 Salt-stressed see... 101 1e-019
gb|CN150014.1|CN150014 WOUND1_66_H05.b1_A002 Wounded leaves... 101 1e-019
gb|CX618728.1|CX618728 GABR1_41_G07.b1_A002 GA- or brassino... 101 1e-019
gb|CX622109.1|CX622109 GABR1_62_C09.b2_A002 GA- or brassino... 101 1e-019
gb|CF429902.1|CF429902 PH1_25_D10.b1_A002 Phosphorous-defic... 100 6e-019
gb|CF431021.1|CF431021 NIT1_4_H02.b1_A002 Nitrogen-deficien... 100 6e-019
gb|CX620993.1|CX620993 GABR1_55_G09.b1_A002 GA- or brassino... 100 6e-019
gb|CN141678.1|CN141678 WOUND1_1_E01.b1_A002 Wounded leaves ... 96 9e-018
gb|CN145288.1|CN145288 WOUND1_28_A10.b2_A002 Wounded leaves... 96 9e-018
gb|CD236143.1|CD236143 SS1_32_H03.b1_A012 Salt-stressed see... 94 4e-017
gb|BG463547.1|BG463547 EM1_49_H04.g1_A002 Embryo 1 (EM1) So... 92 1e-016
gb|CF429614.1|CF429614 PH1_23_D07.b1_A002 Phosphorous-defic... 90 6e-016
gb|CN129718.1|CN129718 RHOH1_37_B03.b1_A002 Acid- and alkal... 90 6e-016
gb|CN135665.1|CN135665 OX1_38_F05.b1_A002 Oxidatively-stres... 90 6e-016
gb|CN150018.1|CN150018 WOUND1_66_H09.b1_A002 Wounded leaves... 90 6e-016
gb|CX606431.1|CX606431 ANR1_3_B02.b1_A002 Anaerobic roots S... 90 6e-016
gb|CX606801.1|CX606801 ANR1_5_B12.b1_A002 Anaerobic roots S... 90 6e-016
gb|CX610703.1|CX610703 ANR1_20_G07.b1_A002 Anaerobic roots ... 90 6e-016
gb|CX614913.1|CX614913 GABR1_17_C07.b1_A002 GA- or brassino... 90 6e-016
gb|CX616691.1|CX616691 GABR1_29_H04.b1_A002 GA- or brassino... 90 6e-016
gb|CL179753.1|CL179753 104_389_10895528_148_31907_056 Sorgh... 88 2e-015
gb|CW223611.1|CW223611 104_659_11203008_148_37191_088 Sorgh... 86 9e-015
gb|CW351997.1|CW351997 fsbb001f014a15k0 Sorghum methylation... 86 9e-015
gb|CN124677.1|CN124677 RHOH1_6_F06.b1_A002 Acid- and alkali... 86 9e-015
gb|CN150772.1|CN150772 WOUND1_71_H03.b1_A002 Wounded leaves... 86 9e-015
gb|CW130305.1|CW130305 104_512_11115043_116_34768_068 Sorgh... 84 4e-014
gb|CW480059.1|CW480059 fsbb001f238o16f0 Sorghum methylation... 84 4e-014
gb|CW480060.1|CW480060 fsbb001f238o16k0 Sorghum methylation... 84 4e-014
gb|CW284730.1|CW284730 104_761_11409948_116_35490_036 Sorgh... 82 1e-013
gb|CW284731.1|CW284731 104_761_11409948_148_35494_036 Sorgh... 82 1e-013
gb|CD208536.1|CD208536 HS1_38_H12.g1_A012 Heat-shocked seed... 82 1e-013
gb|CN128566.1|CN128566 RHOH1_30_G06.b1_A002 Acid- and alkal... 82 1e-013
gb|CN141999.1|CN141999 WOUND1_3_E12.b1_A002 Wounded leaves ... 82 1e-013
gb|CD232077.1|CD232077 SS1_38_E04.b1_A012 Salt-stressed see... 80 5e-013
gb|CL152121.1|CL152121 104_335_10779735_114_31363_135 Sorgh... 78 2e-012
gb|CL152964.1|CL152964 104_337_10780377_114_31367_009 Sorgh... 78 2e-012
gb|CL192771.1|CL192771 104_415_10940474_116_32263_001 Sorgh... 78 2e-012
gb|CW124855.1|CW124855 104_504_11112012_148_34702_034 Sorgh... 78 2e-012
gb|CW155257.1|CW155257 104_557_11146040_116_36358_020 Sorgh... 78 2e-012
gb|CW255680.1|CW255680 104_720_11226371_116_35402_042 Sorgh... 78 2e-012
gb|CW343244.1|CW343244 104_845_11487314_116_36184_007 Sorgh... 78 2e-012
gb|CW478890.1|CW478890 fsbb001f237a04f0 Sorghum methylation... 78 2e-012
gb|CW478891.1|CW478891 fsbb001f237a04k0 Sorghum methylation... 78 2e-012
gb|AW923012.1|AW923012 DG1_48_G01.b1_A002 Dark Grown 1 (DG1... 78 2e-012
gb|CD231893.1|CD231893 SS1_30_E08.g1_A012 Salt-stressed see... 78 2e-012
gb|CD234308.1|CD234308 SS1_26_B02.g1_A012 Salt-stressed see... 78 2e-012
gb|CD236240.1|CD236240 SS1_32_H03.g1_A012 Salt-stressed see... 78 2e-012
gb|CF432260.1|CF432260 NIT1_15_D05.b1_A002 Nitrogen-deficie... 78 2e-012
gb|CN124765.1|CN124765 RHOH1_6_F06.g1_A002 Acid- and alkali... 78 2e-012
gb|CN141909.1|CN141909 WOUND1_2_D08.g1_A002 Wounded leaves ... 78 2e-012
gb|CN142079.1|CN142079 WOUND1_3_E12.g1_A002 Wounded leaves ... 78 2e-012
gb|CN143379.1|CN143379 WOUND1_15_H07.g1_A002 Wounded leaves... 78 2e-012
gb|CN143714.1|CN143714 WOUND1_17_H12.g1_A002 Wounded leaves... 78 2e-012
gb|CN144196.1|CN144196 WOUND1_20_F05.g1_A002 Wounded leaves... 78 2e-012
gb|CN144667.1|CN144667 WOUND1_23_F05.g1_A002 Wounded leaves... 78 2e-012
gb|CN145362.1|CN145362 WOUND1_28_A10.g1_A002 Wounded leaves... 78 2e-012
gb|CN145372.1|CN145372 WOUND1_28_B08.g1_A002 Wounded leaves... 78 2e-012
gb|CN146609.1|CN146609 WOUND1_42_A04.g1_A002 Wounded leaves... 78 2e-012
gb|CN146754.1|CN146754 WOUND1_43_B07.g1_A002 Wounded leaves... 78 2e-012
gb|CN148348.1|CN148348 WOUND1_55_G02.g1_A002 Wounded leaves... 78 2e-012
gb|CN149132.1|CN149132 WOUND1_60_H10.g1_A002 Wounded leaves... 78 2e-012
gb|CN150048.1|CN150048 WOUND1_66_C07.g1_A002 Wounded leaves... 78 2e-012
gb|CN150084.1|CN150084 WOUND1_66_G08.g1_A002 Wounded leaves... 78 2e-012
gb|CN150092.1|CN150092 WOUND1_66_H05.g1_A002 Wounded leaves... 78 2e-012
gb|CN150856.1|CN150856 WOUND1_71_H03.g1_A002 Wounded leaves... 78 2e-012
gb|CX618812.1|CX618812 GABR1_41_G07.g1_A002 GA- or brassino... 78 2e-012
gb|CX622200.1|CX622200 GABR1_62_C09.g2_A002 GA- or brassino... 78 2e-012
gb|CW245146.1|CW245146 104_706_11220910_116_37600_093 Sorgh... 76 9e-012
gb|CN129547.1|CN129547 RHOH1_36_B08.b3_A002 Acid- and alkal... 76 9e-012
gb|CX606217.1|CX606217 ANR1_1_F10.g1_A002 Anaerobic roots S... 76 9e-012
gb|CL192770.1|CL192770 104_415_10940474_114_32259_001 Sorgh... 74 3e-011
gb|CW063049.1|CW063049 104_308_10521687_1_30092 Sorghum met... 74 3e-011
gb|CW392630.1|CW392630 fsbb001f079f09f0 Sorghum methylation... 74 3e-011
gb|CF427655.1|CF427655 PH1_10_F04.b1_A002 Phosphorous-defic... 74 3e-011
gb|CF432253.1|CF432253 NIT1_15_E06.b1_A002 Nitrogen-deficie... 74 3e-011
gb|CF490081.1|CF490081 POL1_62_H01.b1_A002 Pollen Sorghum b... 74 3e-011
gb|CN130050.1|CN130050 RHOH1_39_A12.b1_A002 Acid- and alkal... 74 3e-011
gb|CX621118.1|CX621118 GABR1_56_D04.b1_A002 GA- or brassino... 74 3e-011
gb|CW192116.1|CW192116 104_614_11178853_116_36947_057 Sorgh... 72 1e-010
gb|CW324654.1|CW324654 104_819_11477275_148_35912_076 Sorgh... 72 1e-010
gb|CW376017.1|CW376017 fsbb001f053k20k0 Sorghum methylation... 72 1e-010
gb|CN147854.1|CN147854 WOUND1_52_E02.g1_A002 Wounded leaves... 72 1e-010
gb|CN146181.1|CN146181 WOUND1_38_A06.g1_A002 Wounded leaves... 70 5e-010
gb|CN150096.1|CN150096 WOUND1_66_H09.g1_A002 Wounded leaves... 70 5e-010
gb|CF771144.1|CF771144 DSBF1_14_E10.g1_A010 Drought-stresse... 68 2e-009
gb|CW022804.1|CW022804 104_162_10432068_1_30008 Sorghum met... 66 8e-009
gb|CW462712.1|CW462712 fsbb001f210p18f0 Sorghum methylation... 66 8e-009
gb|CN124537.1|CN124537 RHOH1_5_A06.g1_A002 Acid- and alkali... 66 8e-009
gb|CN129633.1|CN129633 RHOH1_36_B08.g1_A002 Acid- and alkal... 66 8e-009
gb|CX607134.1|CX607134 ANR1_6_H06.g1_A002 Anaerobic roots S... 66 8e-009
gb|CX608043.1|CX608043 ANR1_32_F11.b1_A002 Anaerobic roots ... 66 8e-009
gb|CX608131.1|CX608131 ANR1_32_G10.g1_A002 Anaerobic roots ... 66 8e-009
gb|CB925746.1|CB925746 ABA1_23_E12.b1_A012 Abscisic acid-tr... 64 3e-008
gb|CL179752.1|CL179752 104_389_10895528_116_31908_056 Sorgh... 62 1e-007
gb|CW097150.1|CW097150 104_463_11002295_148_34356_094 Sorgh... 62 1e-007
gb|CW125846.1|CW125846 104_506_11112559_148_34726_028 Sorgh... 62 1e-007
gb|CW364959.1|CW364959 fsbb001f037d22k0 Sorghum methylation... 62 1e-007
gb|CD235468.1|CD235468 SS1_29_H10.g1_A012 Salt-stressed see... 62 1e-007
gb|CF431223.1|CF431223 NIT1_6_C08.g1_A002 Nitrogen-deficien... 62 1e-007
gb|CN143623.1|CN143623 WOUND1_17_H12.b1_A002 Wounded leaves... 62 1e-007
gb|CN145101.1|CN145101 WOUND1_26_F11.g1_A002 Wounded leaves... 62 1e-007
gb|CW092077.1|CW092077 104_454_10998930_114_33037_073 Sorgh... 60 5e-007
gb|CW209940.1|CW209940 104_640_11189528_116_36996_028 Sorgh... 60 5e-007
gb|CW277668.1|CW277668 104_751_11406150_116_35410_017 Sorgh... 60 5e-007
gb|CW277669.1|CW277669 104_751_11406150_148_35414_017 Sorgh... 60 5e-007
gb|CW324653.1|CW324653 104_819_11477275_116_35916_076 Sorgh... 60 5e-007
gb|CW347989.1|CW347989 fsbb001f008c13k0 Sorghum methylation... 60 5e-007
gb|CW473753.1|CW473753 fsbb001f229e09f0 Sorghum methylation... 60 5e-007
gb|CN150938.1|CN150938 WOUND1_72_A06.g1_A002 Wounded leaves... 60 5e-007
gb|CN151289.1|CN151289 WOUND1_74_C10.g1_A002 Wounded leaves... 60 5e-007
gb|CN151787.1|CN151787 WOUND1_77_D07.g1_A002 Wounded leaves... 60 5e-007
gb|BZ341579.1|BZ341579 ic46d06.b1 WGS-SbicolorF (JM107 adap... 58 2e-006
gb|CW226357.1|CW226357 104_664_11204843_116_37215_042 Sorgh... 58 2e-006
gb|CW351996.1|CW351996 fsbb001f014a15f0 Sorghum methylation... 58 2e-006
gb|CL698241.2|CL698241 SP__Ba0027B15.f SP__Ba Sorghum propi... 58 2e-006
gb|BM324189.1|BM324189 PIC1_25_D09.b1_A002 Pathogen-infecte... 58 2e-006
gb|CD432476.1|CD432476 ETH1_30_F07.b1_A002 Ethylene-treated... 58 2e-006
gb|CW152280.1|CW152280 104_553_11144405_116_36323_023 Sorgh... 56 8e-006
gb|CW376016.1|CW376016 fsbb001f053k20f0 Sorghum methylation... 56 8e-006
gb|AW677325.1|AW677325 DG1_5_C12.g1_A002 Dark Grown 1 (DG1)... 54 3e-005
gb|CF755720.1|CF755720 DSAF1_1_B02.b1_A011 Drought-stressed... 52 1e-004
gb|CC059412.1|CC059412 ii23b07.b1 WGS-SbicolorF (DH5a methy... 50 5e-004
gb|CW312751.1|CW312751 104_802_11470926_148_35779_019 Sorgh... 50 5e-004
gb|CW371364.1|CW371364 fsbb001f046m18f0 Sorghum methylation... 50 5e-004
gb|BZ338207.1|BZ338207 ia93g08.b1 WGS-SbicolorF (JM107 adap... 48 0.002
gb|CW152281.1|CW152281 104_553_11144405_148_36327_023 Sorgh... 48 0.002
gb|CW478518.1|CW478518 fsbb001f236h04f0 Sorghum methylation... 48 0.002
gb|CF479957.1|CF479957 POL1_62_H01.g1_A002 Pollen Sorghum b... 48 0.002
gb|CL167616.1|CL167616 104_364_10810203_116_31803_267 Sorgh... 46 0.008
gb|CW243769.1|CW243769 104_704_11220229_148_37582_057 Sorgh... 46 0.008
gb|CW433620.1|CW433620 fsbb001f148o16f0 Sorghum methylation... 46 0.008
gb|CW433621.1|CW433621 fsbb001f148o16k0 Sorghum methylation... 46 0.008
gb|CL177478.1|CL177478 104_384_10893856_148_31915_304 Sorgh... 44 0.030
gb|CW055425.1|CW055425 104_296_10517092_114_30174 Sorghum m... 44 0.030
gb|CW243768.1|CW243768 104_704_11220229_116_37581_057 Sorgh... 44 0.030
gb|BF656854.1|BF656854 OV2_23_G08.g1_A002 Ovary 2 (OV2) Sor... 44 0.030
gb|BM328691.1|BM328691 PIC1_25_D09.g1_A002 Pathogen-infecte... 44 0.030
gb|CN128656.1|CN128656 RHOH1_30_G06.g1_A002 Acid- and alkal... 44 0.030
gb|CW513014.1|CW513014 115_3_10511155_1_30020 Sorghum unfil... 42 0.12
gb|CW045869.1|CW045869 104_282_10509825_114_30228 Sorghum m... 42 0.12
gb|BZ341816.1|BZ341816 ic78h07.b1 WGS-SbicolorF (JM107 adap... 40 0.47
gb|CW021587.1|CW021587 104_160_10431349_1_30004 Sorghum met... 40 0.47
gb|CW027499.1|CW027499 104_254_10498553_114_30395 Sorghum m... 40 0.47
gb|CW027500.1|CW027500 104_254_10498553_116_30396 Sorghum m... 40 0.47
gb|CW099682.1|CW099682 104_466_11003681_148_34376_067 Sorgh... 40 0.47
gb|CW243706.1|CW243706 104_704_11220196_116_37580_010 Sorgh... 40 0.47
gb|CW248217.1|CW248217 104_709_11222182_148_35026_087 Sorgh... 40 0.47
gb|CW258043.1|CW258043 104_723_11227661_148_35156_019 Sorgh... 40 0.47
gb|CW260491.1|CW260491 104_727_11228993_148_35199_075 Sorgh... 40 0.47
gb|CW314379.1|CW314379 104_805_11471798_148_35822_063 Sorgh... 40 0.47
gb|CW336561.1|CW336561 104_835_11483659_116_36096_066 Sorgh... 40 0.47
gb|CW336562.1|CW336562 104_835_11483659_148_36100_066 Sorgh... 40 0.47
gb|CW450706.1|CW450706 fsbb001f189h15k0 Sorghum methylation... 40 0.47
gb|CW461660.1|CW461660 fsbb001f209g20f0 Sorghum methylation... 40 0.47
gb|CL704884.2|CL704884 SP__Bb0031B03.f SP__Bb Sorghum propi... 40 0.47
gb|CN123882.1|CN123882 RHOH1_1_G06.b1_A002 Acid- and alkali... 40 0.47
gb|CX608050.1|CX608050 ANR1_32_G10.b1_A002 Anaerobic roots ... 40 0.47
>gb|CN148282.1|CN148282 WOUND1_55_G06.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_55_G06_A002 3', mRNA sequence
Length = 741
Score = 817 bits (412), Expect = 0.0
Identities = 640/716 (89%)
Strand = Plus / Minus
Query: 153 cgaaacacgtattcgccaaataatcatgggtagacctcgatgatggatcgaacacctaga 212
|||||||||| ||| ||||| ||| ||||||||||||| ||||||||||||||||| |||
Sbjct: 719 cgaaacacgttttcaccaaacaattatgggtagacctcaatgatggatcgaacaccaaga 660
Query: 213 acgggtatgattttgtagtcgctaaatccagcttcggaaattatctttttccactcatgt 272
|| |||||||||||||| ||||||||||| ||||| | || ||||| ||||| || ||
Sbjct: 659 acaggtatgattttgtaatcgctaaatccggcttcaaagatgatcttcttccattcttgc 600
Query: 273 tcgtctcgctcggcgccattgatcgtcatgatgaagagatcaaacaagacctgagtctct 332
|||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 599 tcgtctcgctcgacgccgttgacaaacatgatgaagagatcaaacaagacctgagtctct 540
Query: 333 ttgtgcttaatgtttgacgactggcctccaacaaccatatcaacgattatcacctttcct 392
|||||||||||||||||||| ||||| || | ||||||||| | ||||||||||||||||
Sbjct: 539 ttgtgcttaatgtttgacgattggccccccataaccatatctaggattatcacctttcct 480
Query: 393 cctgcatccctggaaggtatagctttcttacagttcttgagtatcttgatacaatcagca 452
|||||||| || ||||||||||| |||||||| ||||| |||||||||||||||||||||
Sbjct: 479 cctgcatctctagaaggtatagcattcttacaattcttcagtatcttgatacaatcagca 420
Query: 453 tcgccccagtcatgcaaaacccacttaaggaagacggcgtctgccggtggaatgctctca 512
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 419 tcgccccagtcatgcaaaacccacttaaggaagacggcgtttgccggtggaatgctctca 360
Query: 513 aacatgtcgccagcaatatacttgacactggtgttagcgggagcattggcggcgacatgc 572
|||||||| ||||||| |||||| ||| |||| ||| ||||||||||||||||||||||
Sbjct: 359 aacatgtcaccagcaacatacttcacatcggtgctagtgggagcattggcggcgacatgc 300
Query: 573 gggagatccaggacactgcactggacatgcgggaacgcggtcgagatagccagggccgcc 632
|| || ||||| || ||||||||||||| |||||||||| |||||||||||| ||| ||
Sbjct: 299 ggcagctccagcacgctgcactggacatccgggaacgcgatcgagatagccatggctgcg 240
Query: 633 gcgccaagccctccggcgacgtcgacaagggagctcagaccccggaagacgtcgccgcac 692
| ||||||||||| ||||||||||||| ||||||||| ||||||||||| ||||||||
Sbjct: 239 cctccaagccctccagcgacgtcgacaacggagctcagcccccggaagacatcgccgcag 180
Query: 693 tccttgacgacgatgtccatgacgaagctgctgtcgcagaccataccttggttgaagagc 752
|||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||
Sbjct: 179 tccttgacgacgatgtccatgatgaagctgctgtcgcagaccatcccctggttgaagagc 120
Query: 753 tcgccgaaagctggcttgtggtcattcaggtcccaggcagtgagcccatgcgtcatctca 812
| ||| || || || |||||||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 119 ttgcccaaggcagggttgtggtcgttcaggtcccacgcagtctgcccatgcgtcatctcg 60
Query: 813 aacagggtcgggtctgagcgctcgtgctgtaaccatgtgccgaggccaaggaaagg 868
||||||| |||||||||| |||| ||||| ||||| ||||||||||||||||||||
Sbjct: 59 aacagggacgggtctgagtgctcttgctggaaccacgtgccgaggccaaggaaagg 4
>gb|CN148351.1|CN148351 WOUND1_55_G06.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_55_G06_A002 5', mRNA sequence
Length = 816
Score = 753 bits (380), Expect = 0.0
Identities = 652/740 (88%), Gaps = 12/740 (1%)
Strand = Plus / Minus
Query: 498 ggtggaatgctctcaaacatgtcgccagcaatatacttgacactggtgttagcgggagca 557
||||||||||||||||||||||| ||||||| |||||| ||| |||| ||| |||||||
Sbjct: 816 ggtggaatgctctcaaacatgtcaccagcaacatacttcacatcggtgctagtgggagca 757
Query: 558 ttggcggcgacatgcgggagatccaggacactgcactggacatgcgggaacgcggtcgag 617
| ||||||||||||||| || ||||| || ||||||||||||| |||||||||| |||||
Sbjct: 756 tgggcggcgacatgcggcagctccagcacgctgcactggacatccgggaacgcgatcgag 697
Query: 618 atagccagggccgccgcgccaagccctccggcgacgtcgacaagggagctcagaccccgg 677
||||||| ||| || | ||||||||||| ||||||||||||| ||||||||| ||||||
Sbjct: 696 atagccatggctgcgcctccaagccctccagcgacgtcgacaacggagctcagcccccgg 637
Query: 678 aagacgtcgccgcactccttgacgacgatgtccatgacgaagctgctgtcgcagaccata 737
||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 636 aagacatcgccgcagtccttgacgacgatgtccatgatgaagctgctgtcgcagaccatc 577
Query: 738 ccttggttgaagagctcgccgaaagctggcttgtggtcattcaggtcccaggcagtgagc 797
|| ||||||||||||| |||||| || || |||||||| ||||||||||| ||||| ||
Sbjct: 576 ccctggttgaagagcttgccgaaggcagggttgtggtcgttcaggtcccacgcagtctgc 517
Query: 798 ccatgcgtcatctcaaacagggtcgggtctgagcgctcgtgctgtaaccatgtgccgagg 857
|| ||||||||||| ||||||| |||||||||| |||| ||||| ||||| |||||||||
Sbjct: 516 ccttgcgtcatctcgaacagggacgggtctgagtgctcttgctggaaccacgtgccgagg 457
Query: 858 ccaaggaaaggcgacacgtagacctggtgtaacaccagggacatgaagggagccaggctt 917
||||||||||| |||||| ||| | || || ||||||||||||| |||| |||||||
Sbjct: 456 ccaaggaaaggggacacgaagatcccatgcaatgccagggacatgaaaggagtcaggctt 397
Query: 918 gaagagccgccaaccaagagctgagacgccggtgtgagtccatagacgagctcgc---cg 974
|| ||||||||||||||||||||||||||||| ||||| || ||||||||||||| ||
Sbjct: 396 gacgagccgccaaccaagagctgagacgccggcgtgagcccgtagacgagctcgccgccg 337
Query: 975 ccgccgtcgtccggcgagcggtgggcggcgctgaagatgccggcggctgtgagcacccgc 1034
||||| |||| | || | ||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 336 ccgccagcgtc-gtcgtg--gtgggcggcgctgaagatgccggtggctgtgagtacccgc 280
Query: 1035 atgaggcgacgcaggcaggggatcttggacgggtggagcgcgg------ccctggaaact 1088
||||||||||| |||||||||||||||||||||||||||| || |||||||||||
Sbjct: 279 atgaggcgacggaggcaggggatcttggacgggtggagcgtgggcgtggccctggaaact 220
Query: 1089 atctggggcagggtggcgttgccaccgtggctgtggatggcgtcggctataccaaggtcc 1148
||||| ||||||||||||||||||||||| ||||||||||||||||| || |||||||||
Sbjct: 219 atctgcggcagggtggcgttgccaccgtgactgtggatggcgtcggcgatgccaaggtcc 160
Query: 1149 actgcagacttgagagccatggacttgatgaaagcaaaggatgtgtgccagagctctagc 1208
| ||| |||||||| ||||||||||| ||| ||||||||| ||||||||||||||||||
Sbjct: 159 aatgctgacttgagcgccatggacttcatgtaagcaaaggtcgtgtgccagagctctagc 100
Query: 1209 tgagcgtcaagcaaggcttg 1228
||||||||||||||||||||
Sbjct: 99 tgagcgtcaagcaaggcttg 80
>gb|CN151625.1|CN151625 WOUND1_76_C11.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_76_C11_A002 5', mRNA sequence
Length = 793
Score = 726 bits (366), Expect = 0.0
Identities = 638/726 (87%), Gaps = 12/726 (1%)
Strand = Plus / Minus
Query: 512 aaacatgtcgccagcaatatacttgacactggtgttagcgggagcattggcggcgacatg 571
||||||||| ||||||| |||||| ||| |||| ||| |||||||||||||||||||||
Sbjct: 793 aaacatgtcaccagcaacatacttcacatcggtgctagtgggagcattggcggcgacatg 734
Query: 572 cgggagatccaggacactgcactggacatgcgggaacgcggtcgagatagccagggccgc 631
||| || ||||| | ||||||||||||| |||||||||| |||||||||||| ||| ||
Sbjct: 733 cggcagctccagctcgctgcactggacatccgggaacgcgatcgagatagccatggctgc 674
Query: 632 cgcgccaagccctccggcgacgtcgacaagggagctcagaccccggaagacgtcgccgca 691
| ||||||||||| ||||||||||||| ||||||||| ||||||||||| ||||||||
Sbjct: 673 gcctccaagccctccagcgacgtcgacaacggagctcagcccccggaagacatcgccgca 614
Query: 692 ctccttgacgacgatgtccatgacgaagctgctgtcgcagaccataccttggttgaagag 751
|||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||
Sbjct: 613 gtccttgacgacgatgtccatgatgaagctgctgtcgcagaccatcccctggttgaagag 554
Query: 752 ctcgccgaaagctggcttgtggtcattcaggtcccaggcagtgagcccatgcgtcatctc 811
|| |||||| || || |||||||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 553 cttgccgaaggcagggttgtggtcgttcaggtcccacgcagtctgcccatgcgtcatctc 494
Query: 812 aaacagggtcgggtctgagcgctcgtgctgtaaccatgtgccgaggccaaggaaaggcga 871
||||||| |||||||||| |||| ||||| ||||| |||||||||||||||||||| ||
Sbjct: 493 gaacagggacgggtctgagtgctcttgctggaaccacgtgccgaggccaaggaaagggga 434
Query: 872 cacgtagacctggtgtaacaccagggacatgaagggagccaggcttgaagagccgccaac 931
|||| ||| | || || ||||||||||||| |||| ||||||||| |||||||||||
Sbjct: 433 cacgaagatcccatgcaatgccagggacatgaaaggagtcaggcttgacgagccgccaac 374
Query: 932 caagagctgagacgccggtgtgagtccatagacgagctcgc---cgccgccgtcgtccgg 988
|||||||||||||||||| ||||| || ||||||||||||| ||||||| |||| |
Sbjct: 373 caagagctgagacgccggcgtgagcccgtagacgagctcgccgccgccgccagcgtc-gt 315
Query: 989 cgagcggtgggcggcgctgaagatgccggcggctgtgagcacccgcatgaggcgacgcag 1048
|| | ||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||
Sbjct: 314 cgtg--gtgggcggcgctgaagatgccggtggctgtgagtacccgcatgaggcgacggag 257
Query: 1049 gcaggggatcttggacgggtggagcgcgg------ccctggaaactatctggggcagggt 1102
||||| |||||||||||||||||||| || |||||||||||||||| ||||||||
Sbjct: 256 gcaggagatcttggacgggtggagcgtgggcgtggccctggaaactatctgcggcagggt 197
Query: 1103 ggcgttgccaccgtggctgtggatggcgtcggctataccaaggtccactgcagacttgag 1162
||||||||||||||| ||||||||||||||||| || |||||||||| ||| ||||||||
Sbjct: 196 ggcgttgccaccgtgactgtggatggcgtcggcgatgccaaggtccaatgctgacttgag 137
Query: 1163 agccatggacttgatgaaagcaaaggatgtgtgccagagctctagctgagcgtcaagcaa 1222
||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 136 cgccatggacttcatgtaagcaaaggtcgtgtgccagagctctagctgagcgtcaagcaa 77
Query: 1223 ggcttg 1228
||||||
Sbjct: 76 ggcttg 71
>gb|BG102714.1|BG102714 RHIZ2_36_D11.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 632
Score = 722 bits (364), Expect = 0.0
Identities = 526/580 (90%)
Strand = Plus / Minus
Query: 153 cgaaacacgtattcgccaaataatcatgggtagacctcgatgatggatcgaacacctaga 212
|||||||||| ||| ||||| ||| ||||||||||||| ||||||||||||||||| |||
Sbjct: 580 cgaaacacgttttcaccaaacaattatgggtagacctcaatgatggatcgaacaccaaga 521
Query: 213 acgggtatgattttgtagtcgctaaatccagcttcggaaattatctttttccactcatgt 272
|| |||||||||||||| ||||||||||| ||||| | || ||||| ||||| || ||
Sbjct: 520 acaggtatgattttgtaatcgctaaatccggcttcaaagatgatcttcttccattcttgc 461
Query: 273 tcgtctcgctcggcgccattgatcgtcatgatgaagagatcaaacaagacctgagtctct 332
|||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 460 tcgtctcgctcgacgccattgacaaacatgatgaagagatcaaacaagacctgagtctct 401
Query: 333 ttgtgcttaatgtttgacgactggcctccaacaaccatatcaacgattatcacctttcct 392
|||||||||||||||||||| ||||| || | ||||||||| | ||||||||||||||||
Sbjct: 400 ttgtgcttaatgtttgacgattggccccccataaccatatctaggattatcacctttcct 341
Query: 393 cctgcatccctggaaggtatagctttcttacagttcttgagtatcttgatacaatcagca 452
||||||||||| | |||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 340 cctgcatccctaggaggtatagctttcttacaattcttcagtatcttgatacaatcagca 281
Query: 453 tcgccccagtcatgcaaaacccacttaaggaagacggcgtctgccggtggaatgctctca 512
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 280 tcgccccagtcatgcaaaacccacttaaggaagacggcatctgccggtggaatgctctca 221
Query: 513 aacatgtcgccagcaatatacttgacactggtgttagcgggagcattggcggcgacatgc 572
|||||||| ||||||| |||||| ||| |||| ||| ||||||||||||||||||||||
Sbjct: 220 aacatgtcaccagcaacatacttcacatcggtgctagtgggagcattggcggcgacatgc 161
Query: 573 gggagatccaggacactgcactggacatgcgggaacgcggtcgagatagccagggccgcc 632
|| || ||||| || ||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 160 ggcagctccagcacgctgcactggacatccgggaacgcggtcgagatagccatggccgcg 101
Query: 633 gcgccaagccctccggcgacgtcgacaagggagctcagaccccggaagacgtcgccgcac 692
| ||||||||||| ||||||||||||| ||||||||| ||||||||||| |||||||||
Sbjct: 100 cctccaagccctccagcgacgtcgacaacggagctcagcccccggaagacatcgccgcac 41
Query: 693 tccttgacgacgatgtccatgacgaagctgctgtcgcaga 732
|||||||||||||||||||||| |||||||||||||||||
Sbjct: 40 tccttgacgacgatgtccatgatgaagctgctgtcgcaga 1
Score = 44.1 bits (22), Expect = 0.030
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 121 ctagttaaccaaacaacttatt 142
||||||||||||||||||||||
Sbjct: 618 ctagttaaccaaacaacttatt 597
>gb|CN150569.1|CN150569 WOUND1_70_C05.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_70_C05_A002 3', mRNA sequence
Length = 749
Score = 696 bits (351), Expect = 0.0
Identities = 555/623 (89%)
Strand = Plus / Minus
Query: 153 cgaaacacgtattcgccaaataatcatgggtagacctcgatgatggatcgaacacctaga 212
|||||||||| ||| ||||| ||| ||||||||||||| ||||||||||||||||| |||
Sbjct: 625 cgaaacacgttttcaccaaacaattatgggtagacctcaatgatggatcgaacaccaaga 566
Query: 213 acgggtatgattttgtagtcgctaaatccagcttcggaaattatctttttccactcatgt 272
|| |||||||||||||| ||||||||||| ||||| | || ||||| ||||| || ||
Sbjct: 565 acaggtatgattttgtaatcgctaaatccggcttcaaagatgatcttcttccattcttgc 506
Query: 273 tcgtctcgctcggcgccattgatcgtcatgatgaagagatcaaacaagacctgagtctct 332
|||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 505 tcgtctcgctcgacgccgttgacaaacatgatgaagagatcaaacaagacctgagtctct 446
Query: 333 ttgtgcttaatgtttgacgactggcctccaacaaccatatcaacgattatcacctttcct 392
|||||||||||||||||||| ||||| || | ||||||||| | ||||||||||||||||
Sbjct: 445 ttgtgcttaatgtttgacgattggccccccataaccatatctaggattatcacctttcct 386
Query: 393 cctgcatccctggaaggtatagctttcttacagttcttgagtatcttgatacaatcagca 452
|||||||| || ||||||||||| |||||||| ||||| |||||||||||||||||||||
Sbjct: 385 cctgcatctctagaaggtatagcattcttacaattcttcagtatcttgatacaatcagca 326
Query: 453 tcgccccagtcatgcaaaacccacttaaggaagacggcgtctgccggtggaatgctctca 512
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 325 ccgccccagtcatgcaaaacccacttaaggaagacggcgtttgccggtggaatgctctca 266
Query: 513 aacatgtcgccagcaatatacttgacactggtgttagcgggagcattggcggcgacatgc 572
|||||||| ||||||| |||||| ||| |||| ||| ||||||||||||||||||||||
Sbjct: 265 aacatgtcaccagcaacatacttcacatcggtgctagtgggagcattggcggcgacatgc 206
Query: 573 gggagatccaggacactgcactggacatgcgggaacgcggtcgagatagccagggccgcc 632
|| || ||||| || ||||||||||||| |||||||||| |||||||||||| ||| ||
Sbjct: 205 ggcagctccagcacgctgcactggacatccgggaacgcgatcgagatagccatggctgcg 146
Query: 633 gcgccaagccctccggcgacgtcgacaagggagctcagaccccggaagacgtcgccgcac 692
| ||||||||||| ||||||||||||| ||||||||| ||||||||||| ||||||||
Sbjct: 145 cctccaagccctccagcgacgtcgacaacggagctcagcccccggaagacatcgccgcag 86
Query: 693 tccttgacgacgatgtccatgacgaagctgctgtcgcagaccataccttggttgaagagc 752
||||||||||| |||||||||| ||||||||||||||||||||| || ||||||||||||
Sbjct: 85 tccttgacgaccatgtccatgatgaagctgctgtcgcagaccatcccctggttgaagagc 26
Query: 753 tcgccgaaagctggcttgtggtc 775
| ||| || || || ||||||||
Sbjct: 25 ttgcccaaggcagggttgtggtc 3
Score = 65.9 bits (33), Expect = 8e-009
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 113 gtcccatgctagttaaccaaacaacttattcag 145
|||||||||||||||||||||||||||||||||
Sbjct: 669 gtcccatgctagttaaccaaacaacttattcag 637
>gb|CN150641.1|CN150641 WOUND1_70_C05.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_70_C05_A002 5', mRNA sequence
Length = 712
Score = 640 bits (323), Expect = 0.0
Identities = 559/635 (88%), Gaps = 12/635 (1%)
Strand = Plus / Minus
Query: 603 gggaacgcggtcgagatagccagggccgccgcgccaagccctccggcgacgtcgacaagg 662
||||||||| |||||||||||| ||| || | ||||||||||| |||| |||||||| |
Sbjct: 712 gggaacgcgatcgagatagccatggctgcgcctccaagccctccagcgatgtcgacaacg 653
Query: 663 gagctcagaccccggaagacgtcgccgcactccttgacgacgatgtccatgacgaagctg 722
|||||||| ||||||||||| |||||||| |||||||||||||||||||||| |||||||
Sbjct: 652 gagctcagcccccggaagacatcgccgcagtccttgacgacgatgtccatgatgaagctg 593
Query: 723 ctgtcgcagaccataccttggttgaagagctcgccgaaagctggcttgtggtcattcagg 782
|||||||||||||| || ||||||||||||| |||||| || || |||||||| ||||||
Sbjct: 592 ctgtcgcagaccatcccctggttgaagagcttgccgaaggcagggttgtggtcgttcagg 533
Query: 783 tcccaggcagtgagcccatgcgtcatctcaaacagggtcgggtctgagcgctcgtgctgt 842
||||| ||||| |||||||||||||||| ||||||| ||||| |||| |||| |||||
Sbjct: 532 tcccacgcagtctgcccatgcgtcatctcgaacagggacgggtttgagtgctcttgctgg 473
Query: 843 aaccatgtgccgaggccaaggaaaggcgacacgtagacctggtgtaacaccagggacatg 902
||||| |||||||||||||||||||| |||||| ||| | || || |||||||||||
Sbjct: 472 aaccacgtgccgaggccaaggaaaggggacacgaagatcccatgcaatgccagggacatg 413
Query: 903 aagggagccaggcttgaagagccgccaaccaagagctgagacgccggtgtgagtccatag 962
|| |||| ||||||||| ||||||||||||||||||||||||||||| ||||| || |||
Sbjct: 412 aaaggagtcaggcttgacgagccgccaaccaagagctgagacgccggcgtgagcccgtag 353
Query: 963 acgagctcgc---cgccgccgtcgtccggcgagcggtgggcggcgctgaagatgccggcg 1019
|||||||||| ||||||| |||| | || | ||||||||||||||||||||||| |
Sbjct: 352 acgagctcgccgccgccgccagcgtc-gtcgtg--gtgggcggcgctgaagatgccggtg 296
Query: 1020 gctgtgagcacccgcatgaggcgacgcaggcaggggatcttggacgggtggagcgcgg-- 1077
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||
Sbjct: 295 gctgtgagtacccgcatgaggcgacggaggcaggggatcttggacgggtggagcgtgggc 236
Query: 1078 ----ccctggaaactatctggggcagggtggcgttgccaccgtggctgtggatggcgtcg 1133
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 235 gtggccctggaaactatctgcggcagggtggcgttgccaccgtgactgtggatggcgtcg 176
Query: 1134 gctataccaaggtccactgcagacttgagagccatggacttgatgaaagcaaaggatgtg 1193
|| || |||||||||| ||| |||||||| ||||||||||| ||| ||||||||| |||
Sbjct: 175 gcgatgccaaggtccaatgctgacttgagcgccatggacttcatgtaagcaaaggtcgtg 116
Query: 1194 tgccagagctctagctgagcgtcaagcaaggcttg 1228
|||||||||||||||||||||||||||||||||||
Sbjct: 115 tgccagagctctagctgagcgtcaagcaaggcttg 81
>gb|CN144191.1|CN144191 WOUND1_20_E12.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_20_E12_A002 5', mRNA sequence
Length = 642
Score = 577 bits (291), Expect = e-163
Identities = 506/575 (88%), Gaps = 12/575 (2%)
Strand = Plus / Minus
Query: 663 gagctcagaccccggaagacgtcgccgcactccttgacgacgatgtccatgacgaagctg 722
|||||||| ||||||||||| |||| ||| |||||||||| ||||||||||| |||||||
Sbjct: 642 gagctcagcccccggaagacatcgctgcagtccttgacgatgatgtccatgatgaagctg 583
Query: 723 ctgtcgcagaccataccttggttgaagagctcgccgaaagctggcttgtggtcattcagg 782
|||||||||||||| | ||||||||||||| |||||| || || |||||||| ||||||
Sbjct: 582 ctgtcgcagaccatcctctggttgaagagcttgccgaaggcagggttgtggtcgttcagg 523
Query: 783 tcccaggcagtgagcccatgcgtcatctcaaacagggtcgggtctgagcgctcgtgctgt 842
||||| ||||| |||||||||||||||| ||||||| |||||||||| |||| |||||
Sbjct: 522 tcccacgcagtctgcccatgcgtcatctcgaacagggacgggtctgagtgctcttgctgg 463
Query: 843 aaccatgtgccgaggccaaggaaaggcgacacgtagacctggtgtaacaccagggacatg 902
||||| |||||||||||||||||||| |||||| ||| | || || |||||||||||
Sbjct: 462 aaccacgtgccgaggccaaggaaaggggacacgaagatcccatgcaatgccagggacatg 403
Query: 903 aagggagccaggcttgaagagccgccaaccaagagctgagacgccggtgtgagtccatag 962
|| |||| ||||||||| ||||||||||||||||||||||||||||| ||||| || |||
Sbjct: 402 aaaggagtcaggcttgacgagccgccaaccaagagctgagacgccggcgtgagcccgtag 343
Query: 963 acgagctcgc---cgccgccgtcgtccggcgagcggtgggcggcgctgaagatgccggcg 1019
|||||||||| ||||||| |||| | || | ||||||||||||||||||||||| |
Sbjct: 342 acgagctcgccgccgccgccagcgtc-gtcgtg--gtgggcggcgctgaagatgccggtg 286
Query: 1020 gctgtgagcacccgcatgaggcgacgcaggcaggggatcttggacgggtggagcgcgg-- 1077
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||
Sbjct: 285 gctgtgagtacccgcatgaggcgacggaggcaggggatcttggacgggtggagcgtgggc 226
Query: 1078 ----ccctggaaactatctggggcagggtggcgttgccaccgtggctgtggatggcgtcg 1133
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 225 gtggccctggaaactatctgcggcagggtggcgttgccaccgtgactgtggatggcgtcg 166
Query: 1134 gctataccaaggtccactgcagacttgagagccatggacttgatgaaagcaaaggatgtg 1193
|| || |||||||||| ||| |||||||| ||||||||||| ||| ||||||||| |||
Sbjct: 165 gcgatgccaaggtccaatgctgacttgagcgccatggacttcatgtaagcaaaggtcgtg 106
Query: 1194 tgccagagctctagctgagcgtcaagcaaggcttg 1228
|||||||||||||||||||||||||||||||||||
Sbjct: 105 tgccagagctctagctgagcgtcaagcaaggcttg 71
>gb|CN151544.1|CN151544 WOUND1_76_C11.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_76_C11_A002 3', mRNA sequence
Length = 620
Score = 551 bits (278), Expect = e-155
Identities = 440/494 (89%)
Strand = Plus / Minus
Query: 153 cgaaacacgtattcgccaaataatcatgggtagacctcgatgatggatcgaacacctaga 212
|||||||||| ||| ||||| ||| ||||||||||||| ||||||||||||||||| |||
Sbjct: 494 cgaaacacgttttcaccaaacaattatgggtagacctcaatgatggatcgaacaccaaga 435
Query: 213 acgggtatgattttgtagtcgctaaatccagcttcggaaattatctttttccactcatgt 272
|| |||||||||||||| ||||||||||| ||||| | || ||||| ||||| || ||
Sbjct: 434 acaggtatgattttgtaatcgctaaatccggcttcaaagatgatcttcttccattcttgc 375
Query: 273 tcgtctcgctcggcgccattgatcgtcatgatgaagagatcaaacaagacctgagtctct 332
|||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 374 tcgtctcgctcgacgccgttgacaaacatgatgaagagatcaaacaagacctgagtctct 315
Query: 333 ttgtgcttaatgtttgacgactggcctccaacaaccatatcaacgattatcacctttcct 392
|||||||||||||||||||| ||||| || | ||||||||| | ||||||||||||||||
Sbjct: 314 ttgtgcttaatgtttgacgattggccccccataaccatatctaggattatcacctttcct 255
Query: 393 cctgcatccctggaaggtatagctttcttacagttcttgagtatcttgatacaatcagca 452
|||||||| || ||||||||||| |||||||| ||||| |||||||||||||||||||||
Sbjct: 254 cctgcatctctagaaggtatagcattcttacaattcttcagtatcttgatacaatcagca 195
Query: 453 tcgccccagtcatgcaaaacccacttaaggaagacggcgtctgccggtggaatgctctca 512
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 194 tcgccccagtcatgcaaaacccacttaaggaagacggcgtttgccggtggaatgctctca 135
Query: 513 aacatgtcgccagcaatatacttgacactggtgttagcgggagcattggcggcgacatgc 572
|||||||| ||||||| |||||| ||| |||| || ||||||||||||||||||||||
Sbjct: 134 aacatgtcaccagcaacatacttcacatcggtgctaatgggagcattggcggcgacatgc 75
Query: 573 gggagatccaggacactgcactggacatgcgggaacgcggtcgagatagccagggccgcc 632
|| || ||||| || ||||||||||||| |||||||||| |||||||||||| ||| ||
Sbjct: 74 ggcagctccagcacgctgcactggacatccgggaacgcgatcgagatagccatggctgcg 15
Query: 633 gcgccaagccctcc 646
| |||||||||||
Sbjct: 14 cctccaagccctcc 1
Score = 65.9 bits (33), Expect = 8e-009
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 113 gtcccatgctagttaaccaaacaacttattcag 145
|||||||||||||||||||||||||||||||||
Sbjct: 538 gtcccatgctagttaaccaaacaacttattcag 506
>gb|CW404976.1|CW404976 fsbb001f097f17f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f097f17, DNA
sequence
Length = 677
Score = 541 bits (273), Expect = e-152
Identities = 473/537 (88%), Gaps = 12/537 (2%)
Strand = Plus / Minus
Query: 701 gacgatgtccatgacgaagctgctgtcgcagaccataccttggttgaagagctcgccgaa 760
|||||||||||||| ||||||||||||||||||||| || ||||||||||||| ||||||
Sbjct: 677 gacgatgtccatgatgaagctgctgtcgcagaccatcccctggttgaagagcttgccgaa 618
Query: 761 agctggcttgtggtcattcaggtcccaggcagtgagcccatgcgtcatctcaaacagggt 820
|| || |||||||| ||||||||||| ||||| ||||||||||||||| |||||||
Sbjct: 617 ggcagggttgtggtcgttcaggtcccacgcagtctgcccatgcgtcatcttgaacaggga 558
Query: 821 cgggtctgagcgctcgtgctgtaaccatgtgccgaggccaaggaaaggcgacacgtagac 880
|||||||||| |||| ||||| ||||| |||||||||||||||||||| |||||| |||
Sbjct: 557 cgggtctgagtgctcttgctggaaccacgtgccgaggccaaggaaaggggacacgaagat 498
Query: 881 ctggtgtaacaccagggacatgaagggagccaggcttgaagagccgccaaccaagagctg 940
| || || ||||||||||||| |||| ||||||||| ||||||||||||||||||||
Sbjct: 497 cccatgcaatgccagggacatgaaaggagtcaggcttgacgagccgccaaccaagagctg 438
Query: 941 agacgccggtgtgagtccatagacgagctcgc---cgccgccgtcgtccggcgagcggtg 997
||||||||| ||||| || ||||||||||||| ||||||| |||| | || | |||
Sbjct: 437 agacgccggcgtgagcccgtagacgagctcgccgccgccgccagcgtc-gtcgtg--gtg 381
Query: 998 ggcggcgctgaagatgccggcggctgtgagcacccgcatgaggcgacgcaggcaggggat 1057
|||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||
Sbjct: 380 ggcggcgctgaagatgccggtggctgtgagtacccgcatgaggcgacggaggcaggggat 321
Query: 1058 cttggacgggtggagcgcgg------ccctggaaactatctggggcagggtggcgttgcc 1111
||||||||||||||||| || |||||||||||||||| |||||||||||||||||
Sbjct: 320 cttggacgggtggagcgtgggcgtggccctggaaactatctgcggcagggtggcgttgcc 261
Query: 1112 accgtggctgtggatggcgtcggctataccaaggtccactgcagacttgagagccatgga 1171
|||||| ||||||||||||||||| || |||||||||| ||| |||||||| ||||||||
Sbjct: 260 accgtgactgtggatggcgtcggcgatgccaaggtccaatgctgacttgagcgccatgga 201
Query: 1172 cttgatgaaagcaaaggatgtgtgccagagctctagctgagcgtcaagcaaggcttg 1228
||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 200 cttcatgtaagcaaaggtcgtgtgccagagctctagctgagcgtcaagcaaggcttg 144
>gb|CN144107.1|CN144107 WOUND1_20_E12.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_20_E12_A002 3', mRNA sequence
Length = 473
Score = 504 bits (254), Expect = e-140
Identities = 398/446 (89%)
Strand = Plus / Minus
Query: 155 aaacacgtattcgccaaataatcatgggtagacctcgatgatggatcgaacacctagaac 214
|||||||| ||| ||||| ||| ||||||||||||| ||||||||||||||||| |||||
Sbjct: 447 aaacacgttttcaccaaacaattatgggtagacctcaatgatggatcgaacaccaagaac 388
Query: 215 gggtatgattttgtagtcgctaaatccagcttcggaaattatctttttccactcatgttc 274
|||||||||||||| || |||||||| ||||| | || ||||| ||||| || || ||
Sbjct: 387 aggtatgattttgtaatccctaaatccggcttcaaagatgatcttcttccattcttgctc 328
Query: 275 gtctcgctcggcgccattgatcgtcatgatgaagagatcaaacaagacctgagtctcttt 334
|||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 327 gtctcgctcgacgccgttgacaaacatgatgaagagatcaaacaagacctgagtctcttt 268
Query: 335 gtgcttaatgtttgacgactggcctccaacaaccatatcaacgattatcacctttcctcc 394
|||||||||||||||||| ||||| || | ||||||||| | ||||||||||||||||||
Sbjct: 267 gtgcttaatgtttgacgattggccccccataaccatatctaggattatcacctttcctcc 208
Query: 395 tgcatccctggaaggtatagctttcttacagttcttgagtatcttgatacaatcagcatc 454
|||||| || ||||| ||||| |||||||| ||||| |||||||||||||||||||||||
Sbjct: 207 tgcatctctagaagggatagcattcttacaattcttcagtatcttgatacaatcagcatc 148
Query: 455 gccccagtcatgcaaaacccacttaaggaagacggcgtctgccggtggaatgctctcaaa 514
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 147 gccccagtcatgcaaaacccacttaaggaagacggcgtttgccggtggaatgctctcaaa 88
Query: 515 catgtcgccagcaatatacttgacactggtgttagcgggagcattggcggcgacatgcgg 574
|||||| ||||||| |||||| ||| |||| ||| ||||||||||||||||||||||||
Sbjct: 87 catgtcaccagcaacatacttcacatcggtgctagtgggagcattggcggcgacatgcgg 28
Query: 575 gagatccaggacactgcactggacat 600
|| ||||| || |||||||||||||
Sbjct: 27 cagctccagcacgctgcactggacat 2
>gb|CW404977.1|CW404977 fsbb001f097f17k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f097f17, DNA
sequence
Length = 556
Score = 490 bits (247), Expect = e-136
Identities = 413/467 (88%), Gaps = 1/467 (0%)
Strand = Plus / Plus
Query: 476 cttaaggaagacggcgtctgccggtggaatgctctcaaacatgtcgccagcaatatactt 535
||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 90 cttaaggaagacggcgtttgccggtggaatgctctcaaacatgtcaccagcaacatactt 149
Query: 536 gacactggtgttagcgggagcattggcggcgacatgcgggagatccaggacactgcactg 595
||| |||| ||| |||||||||||||||||||||||| || ||||| || ||||||||
Sbjct: 150 cacatcggtgctagtgggagcattggcggcgacatgcggcagctccagcacgctgcactg 209
Query: 596 gacatgcgggaacgcggtcgagatagccagggccgccgcgccaagccctccggcgacgtc 655
||||| |||||||||| |||||||||||| ||| || | ||||||||||| ||||||||
Sbjct: 210 gacatccgggaacgcgatcgagatagccatggctgcgcctccaagccctccagcgacgtc 269
Query: 656 gacaagggagctcagaccccggaagacgtcgccgcactccttgacgacgatgtccatgac 715
||||| ||||||||| ||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 270 gacaacggagctcagcccccggaagacatcgccgcagtccttgacgacgatgtccatgat 329
Query: 716 gaagctgctgtcgcagaccataccttggttgaagagctcgccgaaagctggcttgtggtc 775
||||||||||||||||||||| || ||||||||||||| |||||| || || ||||||||
Sbjct: 330 gaagctgctgtcgcagaccatcccctggttgaagagcttgccgaaggcagggttgtggtc 389
Query: 776 attcaggtcccaggcagtgagcccatgcgtcatctcaaacagggtcgggtctgagcgctc 835
||||||||||| ||||| |||||||||||||||| ||||||| |||||||||| ||||
Sbjct: 390 gttcaggtcccacgcagtctgcccatgcgtcatctcgaacagggacgggtctgagtgctc 449
Query: 836 gtgctgtaaccatgtgccgaggccaaggaaaggcgacacgtagacctggtgtaacaccag 895
||||| ||||| |||||||||||||||||||| |||||| ||| | || || ||||
Sbjct: 450 ttgctggaaccacgtgccgaggccaaggaaaggggacacgaagatcccatgcaatgccag 509
Query: 896 ggacatgaagggagccagg-cttgaagagccgccaaccaagagctga 941
||||||||| |||| |||| ||||| |||||||||||||||||||||
Sbjct: 510 ggacatgaaaggagtcaggccttgacgagccgccaaccaagagctga 556
>gb|BG052711.1|BG052711 RHIZ2_28_G08.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 469
Score = 426 bits (215), Expect = e-117
Identities = 341/383 (89%)
Strand = Plus / Minus
Query: 153 cgaaacacgtattcgccaaataatcatgggtagacctcgatgatggatcgaacacctaga 212
|||||||||| ||| ||||| ||| ||||||||||||| ||||||||||||||||| |||
Sbjct: 391 cgaaacacgttttcaccaaacaattatgggtagacctcaatgatggatcgaacaccaaga 332
Query: 213 acgggtatgattttgtagtcgctaaatccagcttcggaaattatctttttccactcatgt 272
|| |||||||||||||| ||||||||||| ||||| | || ||||| ||||| || ||
Sbjct: 331 acaggtatgattttgtaatcgctaaatccggcttcaaagatgatcttcttccattcttgc 272
Query: 273 tcgtctcgctcggcgccattgatcgtcatgatgaagagatcaaacaagacctgagtctct 332
|||| ||||||| ||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 271 tcgtatcgctcgacgccattgacaaacatgatgaagagatcaaacaagacctgggtctct 212
Query: 333 ttgtgcttaatgtttgacgactggcctccaacaaccatatcaacgattatcacctttcct 392
|||||||||||||||||||| ||||| || | ||||||||| | ||||||||||||| ||
Sbjct: 211 ttgtgcttaatgtttgacgattggccccccataaccatatctaggattatcaccttttct 152
Query: 393 cctgcatccctggaaggtatagctttcttacagttcttgagtatcttgatacaatcagca 452
||||||||||| | ||| |||||||||||||| || || |||||||||||||||||||||
Sbjct: 151 cctgcatccctaggagggatagctttcttacaattgttcagtatcttgatacaatcagca 92
Query: 453 tcgccccagtcatgcaaaacccacttaaggaagacggcgtctgccggtggaatgctctca 512
|||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 91 tcgccccagtcatgcaaaacccacttaaggaaaacggcatctgccgggggaatgctctca 32
Query: 513 aacatgtcgccagcaatatactt 535
|||||||| ||||||| ||||||
Sbjct: 31 aacatgtcaccagcaacatactt 9
Score = 44.1 bits (22), Expect = 0.030
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 121 ctagttaaccaaacaacttatt 142
||||||||||||||||||||||
Sbjct: 429 ctagttaaccaaacaacttatt 408
>gb|BG103046.1|BG103046 RHIZ2_36_D11.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 539
Score = 420 bits (212), Expect = e-115
Identities = 406/468 (86%), Gaps = 12/468 (2%)
Strand = Plus / Minus
Query: 770 gtggtcattcaggtcccaggcagtgagcccatgcgtcatctcaaacagggtcgggtctga 829
|||||| ||||||||||| ||||| |||||||||||||||| ||||||| |||||||||
Sbjct: 539 gtggtcgttcaggtcccacgcagtctgcccatgcgtcatctcgaacagggacgggtctga 480
Query: 830 gcgctcgtgctgtaaccatgtgccgaggccaaggaaaggcgacacgtagacctggtgtaa 889
| |||| ||||| ||||| |||||||||||||||||||| |||||| ||| | || ||
Sbjct: 479 gtgctcttgctggaaccacgtgccgaggccaaggaaaggggacacgaagatcccatgcaa 420
Query: 890 caccagggacatgaagggagccaggcttgaagagccgccaaccaagagctgagacgccgg 949
||||||||||||| || | ||||||||| |||||||||||||||||||||||||||||
Sbjct: 419 tgccagggacatgaaaggggtcaggcttgacgagccgccaaccaagagctgagacgccgg 360
Query: 950 tgtgagtccatagacgagctcgc---cgccgccgtcgtccggcgagcggtgggcggcgct 1006
||||| || ||||||||||||| ||||||| |||| | || | ||||||||||||
Sbjct: 359 cgtgagcccgtagacgagctcgccgccgccgccagcgtc-gtcgtg--gtgggcggcgct 303
Query: 1007 gaagatgccggcggctgtgagcacccgcatgaggcgacgcaggcaggggatcttggacgg 1066
||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||| ||
Sbjct: 302 gaagatgccggtggctgtgagtacccgcatgaggcgacggaggcaggggatcttggaggg 243
Query: 1067 gtggagcgc------ggccctggaaactatctggggcagggtggcgttgccaccgtggct 1120
|||||||| |||||||||||||||||| ||||||||||| || |||||||||
Sbjct: 242 gtggagcgtcggcgtggccctggaaactatctgcggcagggtggcagcgctaccgtggct 183
Query: 1121 gtggatggcgtcggctataccaaggtccactgcagacttgagagccatggacttgatgaa 1180
||||||||||||||| || |||||||||| ||| |||||||| ||||||||||| ||| |
Sbjct: 182 gtggatggcgtcggcgatgccaaggtccaatgctgacttgagcgccatggacttcatgta 123
Query: 1181 agcaaaggatgtgtgccagagctctagctgagcgtcaagcaaggcttg 1228
||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 122 agcgaaggtcgtgtgccagagctctagctgagcgtcaagcaaggcttg 75
>gb|CW245145.1|CW245145 104_706_11220910_116_35081_093 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11220910, DNA
sequence
Length = 634
Score = 416 bits (210), Expect = e-114
Identities = 371/422 (87%), Gaps = 12/422 (2%)
Strand = Plus / Minus
Query: 816 agggtcgggtctgagcgctcgtgctgtaaccatgtgccgaggccaaggaaaggcgacacg 875
|||| |||||||||| |||| ||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 634 agggacgggtctgagtgctcttgctggaaccacgtgccgaggccaaggaaaggggacacg 575
Query: 876 tagacctggtgtaacaccagggacatgaagggagccaggcttgaagagccgccaaccaag 935
||| | || || ||||||||||||| |||| ||||||||| |||||||||||||||
Sbjct: 574 aagatcccatgcaatgccagggacatgaaaggagtcaggcttgacgagccgccaaccaag 515
Query: 936 agctgagacgccggtgtgagtccatagacgagctcgc---cgccgccgtcgtccggcgag 992
|||||||||||||| ||||| || ||||||||||||| ||||||| |||| | || |
Sbjct: 514 agctgagacgccggcgtgagcccgtagacgagctcgccgccgccgccagcgtc-gtcgtg 456
Query: 993 cggtgggcggcgctgaagatgccggcggctgtgagcacccgcatgaggcgacgcaggcag 1052
||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||
Sbjct: 455 --gtgggcggcgctgaagatgccggtggctgtgagtacccgcatgaggcgacggaggcag 398
Query: 1053 gggatcttggacgggtggagcgcgg------ccctggaaactatctggggcagggtggcg 1106
|||||||||||||||||||||| || |||||||||||||||| ||||||||||||
Sbjct: 397 gggatcttggacgggtggagcgtgggcgtggccctggaaactatctgcggcagggtggcg 338
Query: 1107 ttgccaccgtggctgtggatggcgtcggctataccaaggtccactgcagacttgagagcc 1166
||||||||||| ||||||||||||||||| || |||||||||| ||| |||||||| |||
Sbjct: 337 ttgccaccgtgactgtggatggcgtcggcgatgccaaggtccaatgctgacttgagcgcc 278
Query: 1167 atggacttgatgaaagcaaaggatgtgtgccagagctctagctgagcgtcaagcaaggct 1226
|||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 277 atggacttcatgtaagcaaaggtcgtgtgccagagctctagctgagcgtcaagcaaggct 218
Query: 1227 tg 1228
||
Sbjct: 217 tg 216
>gb|CW245147.1|CW245147 104_706_11220910_148_35077_093 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11220910, DNA
sequence
Length = 706
Score = 416 bits (210), Expect = e-114
Identities = 327/366 (89%)
Strand = Plus / Plus
Query: 476 cttaaggaagacggcgtctgccggtggaatgctctcaaacatgtcgccagcaatatactt 535
||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 337 cttaaggaagacggcgtttgccggtggaatgctctcaaacatgtcaccagcaacatactt 396
Query: 536 gacactggtgttagcgggagcattggcggcgacatgcgggagatccaggacactgcactg 595
||| |||| ||| |||||||||||||||||||||||| || ||||| || ||||||||
Sbjct: 397 cacatcggtgctagtgggagcattggcggcgacatgcggcagctccagcacgctgcactg 456
Query: 596 gacatgcgggaacgcggtcgagatagccagggccgccgcgccaagccctccggcgacgtc 655
||||| |||||||||| |||||||||||| ||| || | ||||||||||| ||||||||
Sbjct: 457 gacatccgggaacgcgatcgagatagccatggctgcgcctccaagccctccagcgacgtc 516
Query: 656 gacaagggagctcagaccccggaagacgtcgccgcactccttgacgacgatgtccatgac 715
||||| ||||||||| ||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 517 gacaacggagctcagcccccggaagacatcgccgcagtccttgacgacgatgtccatgat 576
Query: 716 gaagctgctgtcgcagaccataccttggttgaagagctcgccgaaagctggcttgtggtc 775
||||||||||||||||||||| || ||||||||||||| |||||| || || ||||||||
Sbjct: 577 gaagctgctgtcgcagaccatcccctggttgaagagcttgccgaaggcagggttgtggtc 636
Query: 776 attcaggtcccaggcagtgagcccatgcgtcatctcaaacagggtcgggtctgagcgctc 835
||||||||||| ||||| |||||||||||||||| ||||||| |||||||||| ||||
Sbjct: 637 gttcaggtcccacgcagtctgcccatgcgtcatctcgaacagggacgggtctgagtgctc 696
Query: 836 gtgctg 841
|||||
Sbjct: 697 ttgctg 702
Score = 266 bits (134), Expect = 4e-069
Identities = 167/178 (93%)
Strand = Plus / Plus
Query: 300 atgatgaagagatcaaacaagacctgagtctctttgtgcttaatgtttgacgactggcct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1 atgatgaagagatcaaacaagacctgagtctctttgtgcttaatgtttgacgattggccc 60
Query: 360 ccaacaaccatatcaacgattatcacctttcctcctgcatccctggaaggtatagctttc 419
|| | ||||||||| | |||||||||||||||||||||||| || ||||||||||| |||
Sbjct: 61 cccataaccatatctaggattatcacctttcctcctgcatctctagaaggtatagcattc 120
Query: 420 ttacagttcttgagtatcttgatacaatcagcatcgccccagtcatgcaaaacccact 477
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttacaattcttcagtatcttgatacaatcagcatcgccccagtcatgcaaaacccact 178
>gb|AW677158.1|AW677158 DG1_5_C12.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 379
Score = 394 bits (199), Expect = e-108
Identities = 334/379 (88%)
Strand = Plus / Minus
Query: 596 gacatgcgggaacgcggtcgagatagccagggccgccgcgccaagccctccggcgacgtc 655
||||| |||||||||| |||||||||||| ||| || | ||||||||||| ||||||||
Sbjct: 379 gacatccgggaacgcgatcgagatagccatggctgcgcctccaagccctccagcgacgtc 320
Query: 656 gacaagggagctcagaccccggaagacgtcgccgcactccttgacgacgatgtccatgac 715
||||| ||||||||| ||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 319 gacaacggagctcagcccccggaagacatcgccgcagtccttgacgacgatgtccatgat 260
Query: 716 gaagctgctgtcgcagaccataccttggttgaagagctcgccgaaagctggcttgtggtc 775
||||||||||||||||||||| || ||||||||||||| |||||| || || ||||||||
Sbjct: 259 gaagctgctgtcgcagaccatcccctggttgaagagcttgccgaaggcagggttgtggtc 200
Query: 776 attcaggtcccaggcagtgagcccatgcgtcatctcaaacagggtcgggtctgagcgctc 835
||||||||||| ||||| |||||||||||||||| ||||||| |||||||||| ||||
Sbjct: 199 gttcaggtcccacgcagtctgcccatgcgtcatctcgaacagggacgggtctgagtgctc 140
Query: 836 gtgctgtaaccatgtgccgaggccaaggaaaggcgacacgtagacctggtgtaacaccag 895
||||| ||||| |||||||||||||||||||| |||||| ||| | || || ||||
Sbjct: 139 ttgctggaaccacgtgccgaggccaaggaaaggggacacgaagatcccatgcaatgccag 80
Query: 896 ggacatgaagggagccaggcttgaagagccgccaaccaagagctgagacgccggtgtgag 955
||||||||| |||| ||||||||| ||||||||| ||||||||||||||||||| |||||
Sbjct: 79 ggacatgaaaggagtcaggcttgacgagccgccagccaagagctgagacgccggcgtgag 20
Query: 956 tccatagacgagctcgccg 974
|| |||||||||||||||
Sbjct: 19 cccgtagacgagctcgccg 1
>gb|CW245148.1|CW245148 104_706_11220910_148_37599_093 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11220910, DNA
sequence
Length = 671
Score = 387 bits (195), Expect = e-105
Identities = 300/335 (89%)
Strand = Plus / Plus
Query: 476 cttaaggaagacggcgtctgccggtggaatgctctcaaacatgtcgccagcaatatactt 535
||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 337 cttaaggaagacggcgtttgccggtggaatgctctcaaacatgtcaccagcaacatactt 396
Query: 536 gacactggtgttagcgggagcattggcggcgacatgcgggagatccaggacactgcactg 595
||| |||| ||| |||||||||||||||||||||||| || ||||| || ||||||||
Sbjct: 397 cacatcggtgctagtgggagcattggcggcgacatgcggcagctccagcacgctgcactg 456
Query: 596 gacatgcgggaacgcggtcgagatagccagggccgccgcgccaagccctccggcgacgtc 655
||||| |||||||||| |||||||||||| ||| || | ||||||||||| ||||||||
Sbjct: 457 gacatccgggaacgcgatcgagatagccatggctgcgcctccaagccctccagcgacgtc 516
Query: 656 gacaagggagctcagaccccggaagacgtcgccgcactccttgacgacgatgtccatgac 715
||||| ||||||||| ||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 517 gacaacggagctcagcccccggaagacatcgccgcagtccttgacgacgatgtccatgat 576
Query: 716 gaagctgctgtcgcagaccataccttggttgaagagctcgccgaaagctggcttgtggtc 775
||||||||||||||||||||| || ||||||||||||| |||||| || || ||||||||
Sbjct: 577 gaagctgctgtcgcagaccatcccctggttgaagagcttgccgaaggcagggttgtggtc 636
Query: 776 attcaggtcccaggcagtgagcccatgcgtcatct 810
||||||||||| ||||| |||||||||||||||
Sbjct: 637 gttcaggtcccacgcagtctgcccatgcgtcatct 671
Score = 266 bits (134), Expect = 4e-069
Identities = 167/178 (93%)
Strand = Plus / Plus
Query: 300 atgatgaagagatcaaacaagacctgagtctctttgtgcttaatgtttgacgactggcct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1 atgatgaagagatcaaacaagacctgagtctctttgtgcttaatgtttgacgattggccc 60
Query: 360 ccaacaaccatatcaacgattatcacctttcctcctgcatccctggaaggtatagctttc 419
|| | ||||||||| | |||||||||||||||||||||||| || ||||||||||| |||
Sbjct: 61 cccataaccatatctaggattatcacctttcctcctgcatctctagaaggtatagcattc 120
Query: 420 ttacagttcttgagtatcttgatacaatcagcatcgccccagtcatgcaaaacccact 477
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttacaattcttcagtatcttgatacaatcagcatcgccccagtcatgcaaaacccact 178
>gb|BG159154.1|BG159154 RHIZ2_28_G08.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 336
Score = 274 bits (138), Expect = 2e-071
Identities = 215/241 (89%), Gaps = 6/241 (2%)
Strand = Plus / Minus
Query: 994 ggtgggcggcgctgaagatgccggcggctgtgagcacccgcatgaggcgacgcaggcagg 1053
|||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||
Sbjct: 315 ggtgggcggcgctgaagatgccggtggctgtgagtacccgcatgaggcgacggaggcagg 256
Query: 1054 ggatcttggacgggtggagcgc------ggccctggaaactatctggggcagggtggcgt 1107
|||||||||| |||||||||| |||||||||||||||||| |||||||||||
Sbjct: 255 ggatcttggaggggtggagcgtcggcgtggccctggaaactatctgcggcagggtggcag 196
Query: 1108 tgccaccgtggctgtggatggcgtcggctataccaaggtccactgcagacttgagagcca 1167
|| |||||||||||||||||||||||| || |||||||||| ||| |||||||| ||||
Sbjct: 195 cgctaccgtggctgtggatggcgtcggcgatgccaaggtccaatgctgacttgagcgcca 136
Query: 1168 tggacttgatgaaagcaaaggatgtgtgccagagctctagctgagcgtcaagcaaggctt 1227
||||||| ||| |||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 135 tggacttcatgtaagcgaaggtcgtgtgccagagctctagctgagcgtcaagcaaggctt 76
Query: 1228 g 1228
|
Sbjct: 75 g 75
>gb|CW108984.1|CW108984 104_480_11097815_116_34493_082 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11097815, DNA
sequence
Length = 645
Score = 240 bits (121), Expect = 3e-061
Identities = 237/275 (86%), Gaps = 3/275 (1%)
Strand = Plus / Minus
Query: 203 aacacctagaacgggtatgattttgtagtcgctaaatccagcttcggaaattatcttttt 262
|||||| ||||| |||||||||||||| || |||||||| ||||| | || ||||| ||
Sbjct: 297 aacaccaagaacaggtatgattttgtaatcactaaatccggcttcatagatgatcttctt 238
Query: 263 ccactcatgttcgtctcgctcggcgccattgatcgtcatgatgaagagatcaaacaagac 322
||| || || |||||||||| | ||||||||| ||||||||||||||||||||||||
Sbjct: 237 ccattcttgctcgtctcgcttgacgccattgacaaacatgatgaagagatcaaacaagac 178
Query: 323 ctgagtctctttgtgcttaatgtttgacgactggcctccaacaaccatatcaacgattat 382
||| ||||||||||||||||||||||| ||||| || | ||||||||| | ||||||
Sbjct: 177 ---agtatctttgtgcttaatgtttgacgattggccccccataaccatatctaggattat 121
Query: 383 cacctttcctcctgcatccctggaaggtatagctttcttacagttcttgagtatcttgat 442
||||||||||||||||||||| | || ||||||||||||||| ||||| ||||||||| |
Sbjct: 120 cacctttcctcctgcatccctaggagttatagctttcttacaattcttcagtatcttgct 61
Query: 443 acaatcagcatcgccccagtcatgcaaaacccact 477
|||| |||||| | |||||||||||||||||||||
Sbjct: 60 acaaccagcattgtcccagtcatgcaaaacccact 26
Score = 65.9 bits (33), Expect = 8e-009
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 113 gtcccatgctagttaaccaaacaacttattcag 145
|||||||||||||||||||||||||||||||||
Sbjct: 425 gtcccatgctagttaaccaaacaacttattcag 393
Score = 65.9 bits (33), Expect = 8e-009
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 154 gaaacacgtattcgccaaataatcatgggtagacctcgatgatggatcgaacacctagaa 213
||||||||| ||| ||||| ||| | ||||||||||| ||||||||||||||||| ||||
Sbjct: 381 gaaacacgttttcaccaaacaattacgggtagacctcaatgatggatcgaacaccaagaa 322
Query: 214 c 214
|
Sbjct: 321 c 321
>gb|CN151846.1|CN151846 WOUND1_78_C02.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_78_C02_A002 3', mRNA sequence
Length = 363
Score = 234 bits (118), Expect = 2e-059
Identities = 211/242 (87%)
Strand = Plus / Minus
Query: 153 cgaaacacgtattcgccaaataatcatgggtagacctcgatgatggatcgaacacctaga 212
|||||||||| ||| ||||| ||| ||||||||||||| ||||||||||||||||| |||
Sbjct: 244 cgaaacacgttttcaccaaacaattatgggtagacctcaatgatggatcgaacaccaaga 185
Query: 213 acgggtatgattttgtagtcgctaaatccagcttcggaaattatctttttccactcatgt 272
|| |||||||||||||| ||||||||||| ||||| | || ||||| ||||| || ||
Sbjct: 184 acaggtatgattttgtaatcgctaaatccggcttccaagatgatcttcttccattcttgc 125
Query: 273 tcgtctcgctcggcgccattgatcgtcatgatgaagagatcaaacaagacctgagtctct 332
|||||||||||| |||| |||| ||||||||| ||||||||||||||||||||||||
Sbjct: 124 tcgtctcgctcgacgccgttgacaaacatgatgaaaagatcaaacaagacctgagtctct 65
Query: 333 ttgtgcttaatgtttgacgactggcctccaacaaccatatcaacgattatcacctttcct 392
|||||||||| ||||||||| ||||| || | ||||||||| | ||||||||||||||||
Sbjct: 64 ttgtgcttaaagtttgacgattggccccccataaccatatctaggattatcacctttcct 5
Query: 393 cc 394
||
Sbjct: 4 cc 3
Score = 65.9 bits (33), Expect = 8e-009
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 113 gtcccatgctagttaaccaaacaacttattcag 145
|||||||||||||||||||||||||||||||||
Sbjct: 288 gtcccatgctagttaaccaaacaacttattcag 256
>gb|CW332999.1|CW332999 104_830_11481709_116_36036_049 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11481709, DNA
sequence
Length = 685
Score = 226 bits (114), Expect = 4e-057
Identities = 230/268 (85%), Gaps = 3/268 (1%)
Strand = Plus / Plus
Query: 203 aacacctagaacgggtatgattttgtagtcgctaaatccagcttcggaaattatcttttt 262
|||||| ||||| |||||||||||||| || |||||||| ||||| | || ||||| ||
Sbjct: 419 aacaccaagaacaggtatgattttgtaatcactaaatccggcttcatagatgatcttctt 478
Query: 263 ccactcatgttcgtctcgctcggcgccattgatcgtcatgatgaagagatcaaacaagac 322
||| || || |||||||||| | ||||||||| ||||||||||||||||||||||||
Sbjct: 479 ccattcttgctcgtctcgcttgacgccattgacaaacatgatgaagagatcaaacaagac 538
Query: 323 ctgagtctctttgtgcttaatgtttgacgactggcctccaacaaccatatcaacgattat 382
||| ||||||||||||||||||||||| ||||| || | ||||||||| | ||||||
Sbjct: 539 ---agtatctttgtgcttaatgtttgacgattggccccccataaccatatctaggattat 595
Query: 383 cacctttcctcctgcatccctggaaggtatagctttcttacagttcttgagtatcttgat 442
||||||||||||||||||||| | || ||||||||||||||| ||||| ||||||||| |
Sbjct: 596 cacctttcctcctgcatccctaggagttatagctttcttacaattcttcagtatcttgct 655
Query: 443 acaatcagcatcgccccagtcatgcaaa 470
|||| |||||| | ||||||||||||||
Sbjct: 656 acaaccagcattgtcccagtcatgcaaa 683
Score = 65.9 bits (33), Expect = 8e-009
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 154 gaaacacgtattcgccaaataatcatgggtagacctcgatgatggatcgaacacctagaa 213
||||||||| ||| ||||| ||| | ||||||||||| ||||||||||||||||| ||||
Sbjct: 335 gaaacacgttttcaccaaacaattacgggtagacctcaatgatggatcgaacaccaagaa 394
Query: 214 c 214
|
Sbjct: 395 c 395
Score = 65.9 bits (33), Expect = 8e-009
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 113 gtcccatgctagttaaccaaacaacttattcag 145
|||||||||||||||||||||||||||||||||
Sbjct: 291 gtcccatgctagttaaccaaacaacttattcag 323
>gb|CN148575.1|CN148575 WOUND1_57_A09.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_57_A09_A002 5', mRNA sequence
Length = 863
Score = 204 bits (103), Expect = 1e-050
Identities = 286/347 (82%)
Strand = Plus / Minus
Query: 414 gctttcttacagttcttgagtatcttgatacaatcagcatcgccccagtcatgcaaaacc 473
|||||||| |||||||| | |||||||| ||| || ||||| ||||||||||||| || |
Sbjct: 858 gctttcttgcagttcttcaatatcttgacacattcggcatcaccccagtcatgcagaatc 799
Query: 474 cacttaaggaagacggcgtctgccggtggaatgctctcaaacatgtcgccagcaatatac 533
||||| |||||||| |||| ||| | |||||||||||||||||||| || ||||| ||
Sbjct: 798 cacttgaggaagaccgcgtttgctgacggaatgctctcaaacatgtcaccggcaatgtat 739
Query: 534 ttgacactggtgttagcgggagcattggcggcgacatgcgggagatccaggacactgcac 593
|| ||| |||||| || ||||||||||||| | || || ||||||||||| || ||||||
Sbjct: 738 ttcacattggtgtcagtgggagcattggcgacaacgtgtgggagatccagcacgctgcac 679
Query: 594 tggacatgcgggaacgcggtcgagatagccagggccgccgcgccaagccctccggcgacg 653
| |||||||||||||| ||| ||| | | ||| || |||| ||||| |||||||||
Sbjct: 678 tccacatgcgggaacgccttcgcgatggtctgggtagcgccgccgagcccgccggcgacg 619
Query: 654 tcgacaagggagctcagaccccggaagacgtcgccgcactccttgacgacgatgtccatg 713
|||||||||||||| | ||| | |||||||||| |||||||||||| |||| |||||||
Sbjct: 618 tcgacaagggagctaatcccctgaaagacgtcgctgcactccttgaccacgacgtccatg 559
Query: 714 acgaagctgctgtcgcagaccataccttggttgaagagctcgccgaa 760
| ||| |||||||| |||||| || | || |||||||| ||||||
Sbjct: 558 atgaaactgctgtccgcgaccatcccgtcgtcgaagagcttgccgaa 512
Score = 61.9 bits (31), Expect = 1e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 1023 gtgagcacccgcatgaggcgacgcaggcaggggatcttggacgggtggagcgcggccctg 1082
|||||||| ||||||||||| |||||||| || |||||||| |||||||| | | || ||
Sbjct: 255 gtgagcacacgcatgaggcgtcgcaggcatggtatcttggatgggtggagggtgaccttg 196
Query: 1083 gaaactatctggggcagggtggc 1105
| |||||||| || ||||||||
Sbjct: 195 gtgactatctgtgggagggtggc 173
>gb|CD235375.1|CD235375 SS1_29_H10.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_29_H10_A012 3', mRNA sequence
Length = 652
Score = 192 bits (97), Expect = 5e-047
Identities = 250/301 (83%)
Strand = Plus / Minus
Query: 414 gctttcttacagttcttgagtatcttgatacaatcagcatcgccccagtcatgcaaaacc 473
|||||||| |||||||| | |||||||| ||| || ||||| ||||||||||||| || |
Sbjct: 309 gctttcttgcagttcttcaatatcttgacacattcggcatcaccccagtcatgcagaatc 250
Query: 474 cacttaaggaagacggcgtctgccggtggaatgctctcaaacatgtcgccagcaatatac 533
||||| |||||||| |||| ||| | |||||||||||||||||||| || ||||| ||
Sbjct: 249 cacttgaggaagaccgcgtttgctgacggaatgctctcaaacatgtcaccggcaatgtat 190
Query: 534 ttgacactggtgttagcgggagcattggcggcgacatgcgggagatccaggacactgcac 593
|| ||| |||||| || ||||||||||||| | || || ||||||||||| || ||||||
Sbjct: 189 ttcacattggtgtcagtgggagcattggcgacaacgtgtgggagatccagcacgctgcac 130
Query: 594 tggacatgcgggaacgcggtcgagatagccagggccgccgcgccaagccctccggcgacg 653
| |||||||||||||| ||| ||| | | ||| || |||| ||||| |||||||||
Sbjct: 129 tccacatgcgggaacgccttcgcgatggtctgggtagcgccgccgagcccgccggcgacg 70
Query: 654 tcgacaagggagctcagaccccggaagacgtcgccgcactccttgacgacgatgtccatg 713
|||||||||||||| | ||| | |||||||||| |||||||||||| |||| |||||||
Sbjct: 69 tcgacaagggagctaatcccctgaaagacgtcgctgcactccttgaccacgacgtccatg 10
Query: 714 a 714
|
Sbjct: 9 a 9
Score = 103 bits (52), Expect = 4e-020
Identities = 121/144 (84%)
Strand = Plus / Minus
Query: 178 atgggtagacctcgatgatggatcgaacacctagaacgggtatgattttgtagtcgctaa 237
|||| ||||||||||| || ||||||||||||||||| || ||||| ||||| |||||
Sbjct: 539 atggatagacctcgataatcgatcgaacacctagaacagggatgatcttgtaagagctaa 480
Query: 238 atccagcttcggaaattatctttttccactcatgttcgtctcgctcggcgccattgatcg 297
|||||||||| |||| ||||| |||||||| | || ||||||||||| ||||||||
Sbjct: 479 atccagcttcaaaaataatcttcttccactctagctcatctcgctcggcaccattgataa 420
Query: 298 tcatgatgaagagatcaaacaaga 321
||| || ||||||||||||||||
Sbjct: 419 acatcataaagagatcaaacaaga 396
>gb|BG558734.1|BG558734 RHIZ2_59_G10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 532
Score = 155 bits (78), Expect = 1e-035
Identities = 141/162 (87%)
Strand = Plus / Minus
Query: 359 tccaacaaccatatcaacgattatcacctttcctcctgcatccctggaaggtatagcttt 418
|||||| || |||||||||||||| |||| ||||| ||||| || ||||| |||||||
Sbjct: 185 tccaaccacaatatcaacgattattgccttgcctccggcatctcttgaagggatagcttg 126
Query: 419 cttacagttcttgagtatcttgatacaatcagcatcgccccagtcatgcaaaacccactt 478
|||||| ||||| | |||||||||||| ||| ||||||||||||||||||||| ||||||
Sbjct: 125 cttacaattcttcaatatcttgatacactcatcatcgccccagtcatgcaaaatccactt 66
Query: 479 aaggaagacggcgtctgccggtggaatgctctcaaacatgtc 520
|||||||| || | ||||||||||||||||| |||||||||
Sbjct: 65 gaggaagacagcatttgccggtggaatgctctgaaacatgtc 24
>gb|CW125845.1|CW125845 104_506_11112559_116_34722_028 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11112559, DNA
sequence
Length = 370
Score = 153 bits (77), Expect = 5e-035
Identities = 230/281 (81%)
Strand = Plus / Plus
Query: 480 aggaagacggcgtctgccggtggaatgctctcaaacatgtcgccagcaatatacttgaca 539
|||||||| |||| ||| | |||||||||||||||||||| || ||||| || || |||
Sbjct: 48 aggaagaccgcgtttgctgacggaatgctctcaaacatgtcaccggcaatgtatttcaca 107
Query: 540 ctggtgttagcgggagcattggcggcgacatgcgggagatccaggacactgcactggaca 599
|||||| || ||||||||||||| | || || ||||||||||| || ||||||| |||
Sbjct: 108 ttggtgtcagtgggagcattggcgacaacgtgtgggagatccagcacgctgcactccaca 167
Query: 600 tgcgggaacgcggtcgagatagccagggccgccgcgccaagccctccggcgacgtcgaca 659
||||||||||| ||| ||| | | ||| || |||| ||||| |||||||||||||||
Sbjct: 168 tgcgggaacgccttcgcgatggtctgggtagcgccgccgagcccgccggcgacgtcgaca 227
Query: 660 agggagctcagaccccggaagacgtcgccgcactccttgacgacgatgtccatgacgaag 719
|||||||| | ||| | |||||||||| |||||||||||| |||| |||||||| |||
Sbjct: 228 agggagctaatcccctgaaagacgtcgctgcactccttgaccacgacgtccatgatgaaa 287
Query: 720 ctgctgtcgcagaccataccttggttgaagagctcgccgaa 760
|||||||| |||||| || | || |||||||| ||||||
Sbjct: 288 ctgctgtccgcgaccatcccgtcgtcgaagagcttgccgaa 328
>gb|CF433158.1|CF433158 NIT1_25_E08.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_25_E08_A002 3', mRNA sequence
Length = 626
Score = 145 bits (73), Expect = 1e-032
Identities = 166/197 (84%)
Strand = Plus / Minus
Query: 414 gctttcttacagttcttgagtatcttgatacaatcagcatcgccccagtcatgcaaaacc 473
|||||||| |||||||| | |||||||| ||| || ||||| ||||||||||||| || |
Sbjct: 222 gctttcttgcagttcttcaatatcttgacacattcggcatcaccccagtcatgcagaatc 163
Query: 474 cacttaaggaagacggcgtctgccggtggaatgctctcaaacatgtcgccagcaatatac 533
||||| |||||||| |||| ||| | |||||||||||||||||||| || ||||| ||
Sbjct: 162 cacttgaggaagaccgcgtttgctgacggaatgctctcaaacatgtcaccggcaatgtat 103
Query: 534 ttgacactggtgttagcgggagcattggcggcgacatgcgggagatccaggacactgcac 593
|| ||| |||||| || ||||||||||||| | || || ||||||||||| || ||||||
Sbjct: 102 ttcacattggtgtcagtgggagcattggcgaccacgtgtgggagatccagcacgctgcac 43
Query: 594 tggacatgcgggaacgc 610
| ||||||||||||||
Sbjct: 42 tccacatgcgggaacgc 26
Score = 111 bits (56), Expect = 2e-022
Identities = 122/144 (84%)
Strand = Plus / Minus
Query: 178 atgggtagacctcgatgatggatcgaacacctagaacgggtatgattttgtagtcgctaa 237
|||| ||||||||||| || ||||||||||||||||| |||||||| ||||| |||||
Sbjct: 452 atggatagacctcgataatcgatcgaacacctagaacaggtatgatcttgtaagagctaa 393
Query: 238 atccagcttcggaaattatctttttccactcatgttcgtctcgctcggcgccattgatcg 297
|||||||||| |||| ||||| |||||||| | || ||||||||||||||||||||
Sbjct: 392 atccagcttcaaaaataatcttcttccactctagctcatctcgctcggcgccattgataa 333
Query: 298 tcatgatgaagagatcaaacaaga 321
| | || ||||||||||||||||
Sbjct: 332 acgtcataaagagatcaaacaaga 309
>gb|CN150866.1|CN150866 WOUND1_72_A06.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_72_A06_A002 3', mRNA sequence
Length = 725
Score = 143 bits (72), Expect = 4e-032
Identities = 240/296 (81%)
Strand = Plus / Minus
Query: 417 ttcttacagttcttgagtatcttgatacaatcagcatcgccccagtcatgcaaaacccac 476
||||| |||||||| | ||| |||| ||| || ||||| ||||||||||||| || ||||
Sbjct: 324 ttcttgcagttcttcaatattttgacacattcggcatcaccccagtcatgcataatccac 265
Query: 477 ttaaggaagacggcgtctgccggtggaatgctctcaaacatgtcgccagcaatatacttg 536
||||||||||| |||| ||||| |||||||||||||||||||| || || || |||||
Sbjct: 264 ttaaggaagacagcgtttgccgacggaatgctctcaaacatgtctccggcgatgtacttc 205
Query: 537 acactggtgttagcgggagcattggcggcgacatgcgggagatccaggacactgcactgg 596
||| ||||||||| ||||||| ||||| || || | ||||||||| || |||||||
Sbjct: 204 acattggtgttagtgggagcactggcgataacgtgtgagagatccagcacgctgcactcc 145
Query: 597 acatgcgggaacgcggtcgagatagccagggccgccgcgccaagccctccggcgacgtcg 656
|||||||||||||| | | ||||| | | ||||| | || |||| |||||||||||
Sbjct: 144 acatgcgggaacgcctttgcgatagtctgcgccgcgccaccgtgcccgccggcgacgtcc 85
Query: 657 acaagggagctcagaccccggaagacgtcgccgcactccttgacgacgatgtccat 712
||||| ||||| | || |||| ||||||| |||||||||||| |||| ||||||
Sbjct: 84 acaagagagctaatcccttggaatacgtcgctgcactccttgaccacgacgtccat 29
Score = 97.6 bits (49), Expect = 2e-018
Identities = 94/109 (86%)
Strand = Plus / Minus
Query: 178 atgggtagacctcgatgatggatcgaacacctagaacgggtatgattttgtagtcgctaa 237
||||||||||||| || ||||||||| ||||||||| |||||||| ||||| | |||||
Sbjct: 569 atgggtagacctccattatggatcgagtacctagaacaggtatgatcttgtaatggctaa 510
Query: 238 atccagcttcggaaattatctttttccactcatgttcgtctcgctcggc 286
|||| ||||| |||| |||||||||||||| |||| |||||||||||
Sbjct: 509 atcccgcttcaaaaataatctttttccactctagttcatctcgctcggc 461
>gb|AI723825.1|AI723825 RHIZ1_12_H04.y1_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 427
Score = 127 bits (64), Expect = 3e-027
Identities = 166/200 (83%)
Strand = Plus / Plus
Query: 410 tatagctttcttacagttcttgagtatcttgatacaatcagcatcgccccagtcatgcaa 469
|||||| ||||| |||||||| | ||| |||||||| || | || |||||||||||||
Sbjct: 52 tatagccttcttgcagttcttcaatattttgatacattcgtcgtcaccccagtcatgcat 111
Query: 470 aacccacttaaggaagacggcgtctgccggtggaatgctctcaaacatgtcgccagcaat 529
|| ||||||||||||||| |||| ||||| |||||||||||||||||||| || || ||
Sbjct: 112 aatccacttaaggaagacagcgtttgccgacggaatgctctcaaacatgtctccggcgat 171
Query: 530 atacttgacactggtgttagcgggagcattggcggcgacatgcgggagatccaggacact 589
||||| ||| ||||||||| ||||||| ||||| || || | ||||||||| || ||
Sbjct: 172 gtacttcacattggtgttagtgggagcactggcgataacgtgtgagagatccagcacgct 231
Query: 590 gcactggacatgcgggaacg 609
||||| |||||||||||||
Sbjct: 232 gcactccacatgcgggaacg 251
Score = 61.9 bits (31), Expect = 1e-007
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 640 gccctccggcgacgtcgacaagggagctcagaccccggaagacgtcgccgcactccttga 699
|||| ||||||||||||||||| ||||| | || |||| ||||||| |||||||||||
Sbjct: 282 gcccgccggcgacgtcgacaagagagctaatcccttggaatacgtcgctgcactccttga 341
Query: 700 cgacgatgtccatga 714
| |||| ||||||||
Sbjct: 342 ccacgacgtccatga 356
>gb|CN151920.1|CN151920 WOUND1_78_C02.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_78_C02_A002 5', mRNA sequence
Length = 130
Score = 125 bits (63), Expect = 1e-026
Identities = 90/99 (90%)
Strand = Plus / Minus
Query: 1130 gtcggctataccaaggtccactgcagacttgagagccatggacttgatgaaagcaaagga 1189
|||||| || |||||||||| ||| |||||||| ||||||||||| ||| |||||||||
Sbjct: 130 gtcggcgatgccaaggtccaatgctgacttgagcgccatggacttcatgtaagcaaaggt 71
Query: 1190 tgtgtgccagagctctagctgagcgtcaagcaaggcttg 1228
||||||||||||||||||||||||||||||||||||||
Sbjct: 70 cgtgtgccagagctctagctgagcgtcaagcaaggcttg 32
>gb|CW192117.1|CW192117 104_614_11178853_148_36948_057 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11178853, DNA
sequence
Length = 677
Score = 121 bits (61), Expect = 2e-025
Identities = 184/225 (81%)
Strand = Plus / Minus
Query: 1004 gctgaagatgccggcggctgtgagcacccgcatgaggcgacgcaggcaggggatcttgga 1063
|||||||||||||||| ||||||| || |||||||| | |||||||| || |||||||
Sbjct: 350 gctgaagatgccggcgactgtgaggacgcgcatgagcctgcgcaggcatggtgtcttgga 291
Query: 1064 cgggtggagcgcggccctggaaactatctggggcagggtggcgttgccaccgtggctgtg 1123
|||||||||||||||| ||| ||||||||| || ||||| |||| || |||| ||
Sbjct: 290 cgggtggagcgcggccttggtggctatctgggtgagagtggcagtgccgccatggcaatg 231
Query: 1124 gatggcgtcggctataccaaggtccactgcagacttgagagccatggacttgatgaaagc 1183
|||||||||||| || || || | || || ||||||| ||||||||||||||||| ||
Sbjct: 230 gatggcgtcggcgatgccgagctgcaacgcggacttgaacgccatggacttgatgaaggc 171
Query: 1184 aaaggatgtgtgccagagctctagctgagcgtcaagcaaggcttg 1228
|| | ||||||||||||| ||||||||||| |||||| ||||
Sbjct: 170 gaatgtgctgtgccagagctcgagctgagcgtcgagcaagccttg 126
>gb|CW209941.1|CW209941 104_640_11189528_148_36995_028 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11189528, DNA
sequence
Length = 644
Score = 121 bits (61), Expect = 2e-025
Identities = 184/225 (81%)
Strand = Plus / Minus
Query: 1004 gctgaagatgccggcggctgtgagcacccgcatgaggcgacgcaggcaggggatcttgga 1063
|||||||||||||||| ||||||| || |||||||| | |||||||| || |||||||
Sbjct: 317 gctgaagatgccggcgactgtgaggacgcgcatgagcctgcgcaggcatggtgtcttgga 258
Query: 1064 cgggtggagcgcggccctggaaactatctggggcagggtggcgttgccaccgtggctgtg 1123
|||||||||||||||| ||| ||||||||| || ||||| |||| || |||| ||
Sbjct: 257 cgggtggagcgcggccttggtggctatctgggtgagagtggcagtgccgccatggcaatg 198
Query: 1124 gatggcgtcggctataccaaggtccactgcagacttgagagccatggacttgatgaaagc 1183
|||||||||||| || || || | || || ||||||| ||||||||||||||||| ||
Sbjct: 197 gatggcgtcggcgatgccgagctgcaacgcggacttgaacgccatggacttgatgaaggc 138
Query: 1184 aaaggatgtgtgccagagctctagctgagcgtcaagcaaggcttg 1228
|| | ||||||||||||| ||||||||||| |||||| ||||
Sbjct: 137 gaatgtgctgtgccagagctcgagctgagcgtcgagcaagccttg 93
>gb|CW347988.1|CW347988 fsbb001f008c13f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f008c13, DNA
sequence
Length = 698
Score = 121 bits (61), Expect = 2e-025
Identities = 184/225 (81%)
Strand = Plus / Minus
Query: 1004 gctgaagatgccggcggctgtgagcacccgcatgaggcgacgcaggcaggggatcttgga 1063
|||||||||||||||| ||||||| || |||||||| | |||||||| || |||||||
Sbjct: 372 gctgaagatgccggcgactgtgaggacgcgcatgagcctgcgcaggcatggtgtcttgga 313
Query: 1064 cgggtggagcgcggccctggaaactatctggggcagggtggcgttgccaccgtggctgtg 1123
|||||||||||||||| ||| ||||||||| || ||||| |||| || |||| ||
Sbjct: 312 cgggtggagcgcggccttggtggctatctgggtgagagtggcagtgccgccatggcaatg 253
Query: 1124 gatggcgtcggctataccaaggtccactgcagacttgagagccatggacttgatgaaagc 1183
|||||||||||| || || || | || || ||||||| ||||||||||||||||| ||
Sbjct: 252 gatggcgtcggcgatgccgagctgcaacgcggacttgaacgccatggacttgatgaaggc 193
Query: 1184 aaaggatgtgtgccagagctctagctgagcgtcaagcaaggcttg 1228
|| | ||||||||||||| ||||||||||| |||||| ||||
Sbjct: 192 gaatgtgctgtgccagagctcgagctgagcgtcgagcaagccttg 148
>gb|CF433215.1|CF433215 NIT1_25_E08.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_25_E08_A002 5', mRNA sequence
Length = 739
Score = 119 bits (60), Expect = 6e-025
Identities = 180/220 (81%)
Strand = Plus / Minus
Query: 541 tggtgttagcgggagcattggcggcgacatgcgggagatccaggacactgcactggacat 600
|||||| || ||||||||||||| | || || ||||||||||| || ||||||| ||||
Sbjct: 732 tggtgtcagtgggagcattggcgacaacgtgtgggagatccagcacgctgcactccacat 673
Query: 601 gcgggaacgcggtcgagatagccagggccgccgcgccaagccctccggcgacgtcgacaa 660
|||||||||| ||| ||| | | ||| || |||| ||||| ||||||||||||||||
Sbjct: 672 gcgggaacgccttcgcgatggtctgggtagcgccgccgagcccgccggcgacgtcgacaa 613
Query: 661 gggagctcagaccccggaagacgtcgccgcactccttgacgacgatgtccatgacgaagc 720
||||||| | ||| | |||||||||| |||||||||||| |||| |||||||| ||| |
Sbjct: 612 gggagctaatcccctgaaagacgtcgctgcactccttgaccacgacgtccatgatgaaac 553
Query: 721 tgctgtcgcagaccataccttggttgaagagctcgccgaa 760
||||||| |||||| || | || |||||||| ||||||
Sbjct: 552 tgctgtccgcgaccatcccgtcgtcgaagagcttgccgaa 513
Score = 61.9 bits (31), Expect = 1e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 1023 gtgagcacccgcatgaggcgacgcaggcaggggatcttggacgggtggagcgcggccctg 1082
|||||||| ||||||||||| |||||||| || |||||||| |||||||| | | || ||
Sbjct: 256 gtgagcacacgcatgaggcgtcgcaggcatggtatcttggatgggtggagggtgaccttg 197
Query: 1083 gaaactatctggggcagggtggc 1105
| |||||||| || ||||||||
Sbjct: 196 gtgactatctgtgggagggtggc 174
>gb|CW108985.1|CW108985 104_480_11097815_148_34497_082 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11097815, DNA
sequence
Length = 619
Score = 115 bits (58), Expect = 1e-023
Identities = 132/156 (84%), Gaps = 3/156 (1%)
Strand = Plus / Plus
Query: 203 aacacctagaacgggtatgattttgtagtcgctaaatccagcttcggaaattatcttttt 262
|||||| ||||| |||||||||||||| || |||||||| ||||| | || ||||| ||
Sbjct: 465 aacaccaagaacaggtatgattttgtaatcactaaatccggcttcatagatgatcttctt 524
Query: 263 ccactcatgttcgtctcgctcggcgccattgatcgtcatgatgaagagatcaaacaagac 322
||| || || |||||||||| | ||||||||| ||||||||||||||||||||||||
Sbjct: 525 ccattcttgctcgtctcgcttgacgccattgacaaacatgatgaagagatcaaacaagac 584
Query: 323 ctgagtctctttgtgcttaatgtttgacgactggcc 358
||| ||||||||||||||||||||||| |||||
Sbjct: 585 ---agtatctttgtgcttaatgtttgacgattggcc 617
Score = 65.9 bits (33), Expect = 8e-009
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 154 gaaacacgtattcgccaaataatcatgggtagacctcgatgatggatcgaacacctagaa 213
||||||||| ||| ||||| ||| | ||||||||||| ||||||||||||||||| ||||
Sbjct: 381 gaaacacgttttcaccaaacaattacgggtagacctcaatgatggatcgaacaccaagaa 440
Query: 214 c 214
|
Sbjct: 441 c 441
Score = 65.9 bits (33), Expect = 8e-009
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 113 gtcccatgctagttaaccaaacaacttattcag 145
|||||||||||||||||||||||||||||||||
Sbjct: 337 gtcccatgctagttaaccaaacaacttattcag 369
>gb|CX606124.1|CX606124 ANR1_1_F10.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_1_F10_A002 3', mRNA sequence
Length = 675
Score = 115 bits (58), Expect = 1e-023
Identities = 286/362 (79%)
Strand = Plus / Minus
Query: 183 tagacctcgatgatggatcgaacacctagaacgggtatgattttgtagtcgctaaatcca 242
|||| ||||||||| ||||||||||| || || ||||| ||||| ||||| |||||||
Sbjct: 369 tagagctcgatgatagatcgaacacccaggactggtataattttatagtcttcaaatcca 310
Query: 243 gcttcggaaattatctttttccactcatgttcgtctcgctcggcgccattgatcgtcatg 302
|| || | | ||||| |||||||| || || |||||||| || |||| ||| ||||||
Sbjct: 309 gcctccaagaaaatcttcttccactcttgctcatctcgctctgctccatcgatagtcatg 250
Query: 303 atgaagagatcaaacaagacctgagtctctttgtgcttaatgtttgacgactggcctcca 362
| ||||| |||||||| || || || || |||| | | | |||||||| ||||
Sbjct: 249 accaagaggtcaaacaaaacttgtgtttccacgtgcctgttatctgacgactcagatcca 190
Query: 363 acaaccatatcaacgattatcacctttcctcctgcatccctggaaggtatagctttctta 422
|| |||||||| | |||||| |||||||||||| |||| | | ||||||||||| |||
Sbjct: 189 accaccatatctatgattattacctttcctcctacatctcgtggaggtatagcttgttta 130
Query: 423 cagttcttgagtatcttgatacaatcagcatcgccccagtcatgcaaaacccacttaagg 482
|||||||| |||||||||| ||| ||| |||| |||||| |||| || |||||| |||
Sbjct: 129 cagttctttagtatcttgacacagtcatcatcattccagtcgtgcagaatccacttgagg 70
Query: 483 aagacggcgtctgccggtggaatgctctcaaacatgtcgccagcaatatacttgacactg 542
|| || ||||| ||||||||||| || | |||||| || ||||||| ||||| ||||||
Sbjct: 69 aacacagcgtcggccggtggaatactttgaaacatatcaccagcaacatactgcacactg 10
Query: 543 gt 544
||
Sbjct: 9 gt 8
>gb|CW097149.1|CW097149 104_463_11002295_116_34344_094 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11002295, DNA
sequence
Length = 439
Score = 111 bits (56), Expect = 2e-022
Identities = 122/144 (84%)
Strand = Plus / Plus
Query: 178 atgggtagacctcgatgatggatcgaacacctagaacgggtatgattttgtagtcgctaa 237
|||| ||||||||||| || ||||||||||||||||| |||||||| ||||| |||||
Sbjct: 30 atggatagacctcgataatcgatcgaacacctagaacaggtatgatcttgtaagagctaa 89
Query: 238 atccagcttcggaaattatctttttccactcatgttcgtctcgctcggcgccattgatcg 297
|||||||||| |||| ||||| |||||||| | || ||||||||||| ||||||||
Sbjct: 90 atccagcttccaaaataatcttcttccactctagctcatctcgctcggcaccattgatta 149
Query: 298 tcatgatgaagagatcaaacaaga 321
||| || ||||||||||||||||
Sbjct: 150 acatcataaagagatcaaacaaga 173
Score = 42.1 bits (21), Expect = 0.12
Identities = 55/65 (84%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 414 gctttcttacag-ttcttgagtatcttgatacaatcagcatcgccccagtcatgcaaaac 472
|||||||| ||| ||||| | |||||||| ||| || ||||| ||||||||||||| ||
Sbjct: 260 gctttcttgcagattcttaaatatcttgacacattcggcatctccccagtcatgcataat 319
Query: 473 ccact 477
|||||
Sbjct: 320 ccact 324
>gb|CW364958.1|CW364958 fsbb001f037d22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f037d22, DNA
sequence
Length = 730
Score = 111 bits (56), Expect = 2e-022
Identities = 122/144 (84%)
Strand = Plus / Plus
Query: 178 atgggtagacctcgatgatggatcgaacacctagaacgggtatgattttgtagtcgctaa 237
|||| ||||||||||| || ||||||||||||||||| |||||||| ||||| |||||
Sbjct: 360 atggatagacctcgataatcgatcgaacacctagaacaggtatgatcttgtaagagctaa 419
Query: 238 atccagcttcggaaattatctttttccactcatgttcgtctcgctcggcgccattgatcg 297
|||||||||| |||| ||||| |||||||| | || ||||||||||| ||||||||
Sbjct: 420 atccagcttcaaaaataatcttcttccactctagctcatctcgctcggcaccattgataa 479
Query: 298 tcatgatgaagagatcaaacaaga 321
||| || ||||||||||||||||
Sbjct: 480 acatcataaagagatcaaacaaga 503
Score = 56.0 bits (28), Expect = 8e-006
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 414 gctttcttacagttcttgagtatcttgatacaatcagcatcgccccagtcatgcaaaacc 473
|||||||| |||||||| | |||||||| ||| || ||||| ||||||||||||| || |
Sbjct: 590 gctttcttgcagttcttcaatatcttgacacattcggcatcaccccagtcatgcagaatc 649
Query: 474 cact 477
||||
Sbjct: 650 cact 653
>gb|CF431162.1|CF431162 NIT1_6_C08.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_6_C08_A002 3', mRNA sequence
Length = 487
Score = 111 bits (56), Expect = 2e-022
Identities = 122/144 (84%)
Strand = Plus / Minus
Query: 178 atgggtagacctcgatgatggatcgaacacctagaacgggtatgattttgtagtcgctaa 237
|||| ||||||||||| || ||||||||||||||||| |||||||| ||||| |||||
Sbjct: 382 atggatagacctcgataatcgatcgaacacctagaacaggtatgatcttgtaagagctaa 323
Query: 238 atccagcttcggaaattatctttttccactcatgttcgtctcgctcggcgccattgatcg 297
|||||||||| |||| ||||| |||||||| | || ||||||||||| ||||||||
Sbjct: 322 atccagcttcaaaaataatcttcttccactctagctcatctcgctcggcaccattgataa 263
Query: 298 tcatgatgaagagatcaaacaaga 321
||| || ||||||||||||||||
Sbjct: 262 acatcataaagagatcaaacaaga 239
Score = 107 bits (54), Expect = 2e-021
Identities = 126/150 (84%)
Strand = Plus / Minus
Query: 414 gctttcttacagttcttgagtatcttgatacaatcagcatcgccccagtcatgcaaaacc 473
|||||||| |||||||| | |||||||| ||| || ||||| ||||||||||||| || |
Sbjct: 152 gctttcttgcagttcttcaatatcttgacacattcggcatcaccccagtcatgcagaatc 93
Query: 474 cacttaaggaagacggcgtctgccggtggaatgctctcaaacatgtcgccagcaatatac 533
||||| ||||| || |||| ||| | |||||||||||||||||||| || ||||| ||
Sbjct: 92 cacttgaggaaaaccgcgtttgctgacggaatgctctcaaacatgtcaccggcaatgtat 33
Query: 534 ttgacactggtgttagcgggagcattggcg 563
|| ||| |||||| || |||||||||||||
Sbjct: 32 ttcacattggtgtcagtgggagcattggcg 3
>gb|CX607042.1|CX607042 ANR1_6_H06.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_H06_A002 3', mRNA sequence
Length = 733
Score = 111 bits (56), Expect = 2e-022
Identities = 269/340 (79%)
Strand = Plus / Minus
Query: 359 tccaacaaccatatcaacgattatcacctttcctcctgcatccctggaaggtatagcttt 418
|||||| |||||||| | ||||| | ||||||||||||||| | | |||||| |||||
Sbjct: 340 tccaaccaccatatctattattattatctttcctcctgcatctcgtggaggtattgcttt 281
Query: 419 cttacagttcttgagtatcttgatacaatcagcatcgccccagtcatgcaaaacccactt 478
|| |||||||| |||||||||| ||| ||| ||||| |||||| |||| |||| ||||
Sbjct: 280 tttgcagttcttcagtatcttgacacactcatcatcgttccagtcgtgcagaaccaactt 221
Query: 479 aaggaagacggcgtctgccggtggaatgctctcaaacatgtcgccagcaatatacttgac 538
||||| || |||| |||||| ||||| || | ||||||||||||||||| ||| | ||
Sbjct: 220 gaggaacacagcgtttgccggcggaatactttgaaacatgtcgccagcaacatagtgcac 161
Query: 539 actggtgttagcgggagcattggcggcgacatgcgggagatccaggacactgcactggac 598
|||||| || |||||| |||||| | || || |||||||| || || |||||| |
Sbjct: 160 gttggtgtcagtgggagctttggcgacaacctgtgggagatcgagcacggtgcacttcaa 101
Query: 599 atgcgggaacgcggtcgagatagccagggccgccgcgccaagccctccggcgacgtcgac 658
|| ||||||||| | || |||| || ||| |||||||||| ||||| || |||||
Sbjct: 100 atccgggaacgccgccgctatagttgcagcggccccgccaagcccgccggcaacatcgac 41
Query: 659 aagggagctcagaccccggaagacgtcgccgcactccttg 698
||| ||| |||| || ||||||| |||||||||||||||
Sbjct: 40 aagcgaggtcagcccatggaagacctcgccgcactccttg 1
Score = 40.1 bits (20), Expect = 0.47
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 201 cgaacacctagaacgggtatgattttgtagtc 232
|||||||| |||| |||||||||||||||||
Sbjct: 507 cgaacaccgagaagtggtatgattttgtagtc 476
>gb|CN146677.1|CN146677 WOUND1_43_B07.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_43_B07_A002 3', mRNA sequence
Length = 754
Score = 109 bits (55), Expect = 6e-022
Identities = 130/155 (83%)
Strand = Plus / Minus
Query: 178 atgggtagacctcgatgatggatcgaacacctagaacgggtatgattttgtagtcgctaa 237
||||||||||||||||||| ||||| ||||| ||||| || || || ||||| ||||
Sbjct: 539 atgggtagacctcgatgatcgatcggacacccagaacaggcattatcttgtaagacctaa 480
Query: 238 atccagcttcggaaattatctttttccactcatgttcgtctcgctcggcgccattgatcg 297
|||| |||||| |||| ||||| |||||||| | || ||||| ||||| |||||||| |
Sbjct: 479 atccggcttcgaaaatgatcttcttccactctttctcatctcgttcggctccattgatag 420
Query: 298 tcatgatgaagagatcaaacaagacctgagtctct 332
||||||| ||||||||||||||||| || ||||||
Sbjct: 419 tcatgataaagagatcaaacaagacttgcgtctct 385
Score = 95.6 bits (48), Expect = 9e-018
Identities = 99/116 (85%)
Strand = Plus / Minus
Query: 408 ggtatagctttcttacagttcttgagtatcttgatacaatcagcatcgccccagtcatgc 467
|||||||| ||||| |||||||| | |||||||| ||| ||||| || ||||| ||||||
Sbjct: 315 ggtatagccttcttgcagttcttcaatatcttgacacattcagcgtcaccccaatcatgc 256
Query: 468 aaaacccacttaaggaagacggcgtctgccggtggaatgctctcaaacatgtcgcc 523
| ||||||||| |||||||| | | ||||| ||||| ||||||||||||||||||
Sbjct: 255 agaacccacttgaggaagacaacatttgccgatggaacgctctcaaacatgtcgcc 200
Score = 46.1 bits (23), Expect = 0.008
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 676 ggaagacgtcgccgcactccttgacgacgatgtccatga 714
|||| |||||||||||||||||||| | || ||||||||
Sbjct: 44 ggaaaacgtcgccgcactccttgaccatgacgtccatga 6
>gb|BZ338208.1|BZ338208 ia93g08.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ia93g08 5', DNA sequence
Length = 689
Score = 105 bits (53), Expect = 1e-020
Identities = 95/109 (87%)
Strand = Plus / Plus
Query: 178 atgggtagacctcgatgatggatcgaacacctagaacgggtatgattttgtagtcgctaa 237
|||||||||||||||| ||||||||| ||||||||| |||||||| ||||| | |||||
Sbjct: 357 atgggtagacctcgattatggatcgagtacctagaacaggtatgatcttgtaatggctaa 416
Query: 238 atccagcttcggaaattatctttttccactcatgttcgtctcgctcggc 286
|||| ||||| |||| |||||||||||||| |||| |||||||||||
Sbjct: 417 atcccgcttcaaaaataatctttttccactctagttcatctcgctcggc 465
Score = 42.1 bits (21), Expect = 0.12
Identities = 51/61 (83%)
Strand = Plus / Plus
Query: 417 ttcttacagttcttgagtatcttgatacaatcagcatcgccccagtcatgcaaaacccac 476
||||| |||||||| | ||| |||| ||| || ||||| ||||||||||||| || ||||
Sbjct: 602 ttcttgcagttcttcaatattttgacacattcggcatcaccccagtcatgcataatccac 661
Query: 477 t 477
|
Sbjct: 662 t 662
>gb|CW092078.1|CW092078 104_454_10998930_116_33041_073 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10998930, DNA
sequence
Length = 707
Score = 105 bits (53), Expect = 1e-020
Identities = 191/237 (80%)
Strand = Plus / Plus
Query: 476 cttaaggaagacggcgtctgccggtggaatgctctcaaacatgtcgccagcaatatactt 535
|||||||||||| |||| ||||| |||||||||||||||||||| || || || |||||
Sbjct: 340 cttaaggaagacagcgtttgccgacggaatgctctcaaacatgtctccggcgatgtactt 399
Query: 536 gacactggtgttagcgggagcattggcggcgacatgcgggagatccaggacactgcactg 595
||| ||||||||| ||||||| ||||| || || | ||||||||| || |||||||
Sbjct: 400 cacattggtgttagtgggagcactggcgataacgtgtgagagatccagcacgctgcactc 459
Query: 596 gacatgcgggaacgcggtcgagatagccagggccgccgcgccaagccctccggcgacgtc 655
|||||||||||||| | | ||||| | | ||||| | || |||| |||||||||||
Sbjct: 460 cacatgcgggaacgcctttgcgatagtctgcgccgcgccaccgtgcccgccggcgacgtc 519
Query: 656 gacaagggagctcagaccccggaagacgtcgccgcactccttgacgacgatgtccat 712
||||| ||||| | || |||| ||||||| |||||||||||| |||| ||||||
Sbjct: 520 cacaagagagctaatcccttggaatacgtcgctgcactccttgaccacgacgtccat 576
Score = 42.1 bits (21), Expect = 0.12
Identities = 51/61 (83%)
Strand = Plus / Plus
Query: 417 ttcttacagttcttgagtatcttgatacaatcagcatcgccccagtcatgcaaaacccac 476
||||| |||||||| | ||| |||| ||| || ||||| ||||||||||||| || ||||
Sbjct: 88 ttcttgcagttcttcaatattttgacacattcggcatcaccccagtcatgcataatccac 147
Query: 477 t 477
|
Sbjct: 148 t 148
>gb|CW128167.1|CW128167 104_509_11113857_148_34750_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11113857, DNA
sequence
Length = 650
Score = 105 bits (53), Expect = 1e-020
Identities = 191/237 (80%)
Strand = Plus / Plus
Query: 476 cttaaggaagacggcgtctgccggtggaatgctctcaaacatgtcgccagcaatatactt 535
|||||||||||| |||| ||||| |||||||||||||||||||| || || || |||||
Sbjct: 227 cttaaggaagacagcgtttgccgacggaatgctctcaaacatgtctccggcgatgtactt 286
Query: 536 gacactggtgttagcgggagcattggcggcgacatgcgggagatccaggacactgcactg 595
||| ||||||||| ||||||| ||||| || || | ||||||||| || |||||||
Sbjct: 287 cacattggtgttagtgggagcactggcgataacgtgtgagagatccagcacgctgcactc 346
Query: 596 gacatgcgggaacgcggtcgagatagccagggccgccgcgccaagccctccggcgacgtc 655
|||||||||||||| | | ||||| | | ||||| | || |||| |||||||||||
Sbjct: 347 cacatgcgggaacgcctttgcgatagtctgcgccgcgccaccgtgcccgccggcgacgtc 406
Query: 656 gacaagggagctcagaccccggaagacgtcgccgcactccttgacgacgatgtccat 712
||||| ||||| | || |||| ||||||| |||||||||||| |||| ||||||
Sbjct: 407 cacaagagagctaatcccttggaatacgtcgctgcactccttgaccacgacgtccat 463
>gb|CW473754.1|CW473754 fsbb001f229e09k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f229e09, DNA
sequence
Length = 683
Score = 105 bits (53), Expect = 1e-020
Identities = 95/109 (87%)
Strand = Plus / Plus
Query: 178 atgggtagacctcgatgatggatcgaacacctagaacgggtatgattttgtagtcgctaa 237
|||||||||||||||| ||||||||| ||||||||| |||||||| ||||| | |||||
Sbjct: 57 atgggtagacctcgattatggatcgagtacctagaacaggtatgatcttgtaatggctaa 116
Query: 238 atccagcttcggaaattatctttttccactcatgttcgtctcgctcggc 286
|||| ||||| |||| |||||||||||||| |||| |||||||||||
Sbjct: 117 atcccgcttcaaaaataatctttttccactctagttcatctcgctcggc 165
Score = 75.8 bits (38), Expect = 9e-012
Identities = 107/130 (82%)
Strand = Plus / Plus
Query: 476 cttaaggaagacggcgtctgccggtggaatgctctcaaacatgtcgccagcaatatactt 535
|||||||||||| |||| ||||| || ||||||||||||||||| || || || |||||
Sbjct: 554 cttaaggaagacagcgtttgccgacgggatgctctcaaacatgtctccggcgatgtactt 613
Query: 536 gacactggtgttagcgggagcattggcggcgacatgcgggagatccaggacactgcactg 595
||| ||||||||| ||||||| ||||| || || | ||||||||| || |||||||
Sbjct: 614 cacattggtgttagtgggagcactggcgataacgtgtgagagatccagcacgctgcactc 673
Query: 596 gacatgcggg 605
|||||||||
Sbjct: 674 cacatgcggg 683
Score = 42.1 bits (21), Expect = 0.12
Identities = 51/61 (83%)
Strand = Plus / Plus
Query: 417 ttcttacagttcttgagtatcttgatacaatcagcatcgccccagtcatgcaaaacccac 476
||||| |||||||| | ||| |||| ||| || ||||| ||||||||||||| || ||||
Sbjct: 302 ttcttgcagttcttcaatattttgacacattcggcatcaccccagtcatgcataatccac 361
Query: 477 t 477
|
Sbjct: 362 t 362
>gb|AI724512.1|AI724512 RHIZ1_37_C02.y1_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 474
Score = 105 bits (53), Expect = 1e-020
Identities = 95/109 (87%)
Strand = Plus / Minus
Query: 178 atgggtagacctcgatgatggatcgaacacctagaacgggtatgattttgtagtcgctaa 237
|||||||||||||||| ||||||||| ||||||||| |||||||| ||||| | |||||
Sbjct: 282 atgggtagacctcgattatggatcgagtacctagaacaggtatgatcttgtaatggctaa 223
Query: 238 atccagcttcggaaattatctttttccactcatgttcgtctcgctcggc 286
|||| ||||| |||| |||||||||||||| |||| |||||||||||
Sbjct: 222 atcccgcttcaaaaataatctttttccactctagttcatctcgctcggc 174
>gb|CN135321.1|CN135321 OX1_32_B07.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_32_B07_A002 3', mRNA sequence
Length = 714
Score = 105 bits (53), Expect = 1e-020
Identities = 314/401 (78%)
Strand = Plus / Minus
Query: 183 tagacctcgatgatggatcgaacacctagaacgggtatgattttgtagtcgctaaatcca 242
|||| |||||| || || |||||||| |||| ||||||||||||||||| | |||||
Sbjct: 444 tagagctcgataatagaacgaacaccaagaagtggtatgattttgtagtccttgaatcct 385
Query: 243 gcttcggaaattatctttttccactcatgttcgtctcgctcggcgccattgatcgtcatg 302
|| ||| | | || || |||||||||| || ||||||||| | ||||||| ||||
Sbjct: 384 gcctcgaagaagatgttcttccactcattctcatctcgctcgaccccattgacattcatc 325
Query: 303 atgaagagatcaaacaagacctgagtctctttgtgcttaatgtttgacgactggcctcca 362
|| | ||| |||||||| ||||| |||||| |||| || | || ||||| || ||||
Sbjct: 324 atcatgaggtcaaacaaaacctgtgtctctatgtgtttgaggtctgacggctcagatcca 265
Query: 363 acaaccatatcaacgattatcacctttcctcctgcatccctggaaggtatagctttctta 422
|| |||||||| | ||||| | ||| ||||||||||| | | |||||| |||| ||
Sbjct: 264 accaccatatctattattattatcttccctcctgcatctcgtggaggtattgcttgtttg 205
Query: 423 cagttcttgagtatcttgatacaatcagcatcgccccagtcatgcaaaacccacttaagg 482
|||||||| |||||||||| ||| ||| ||||| ||||||||||| || |||||| |||
Sbjct: 204 cagttcttcagtatcttgacacactcatcatcgtgccagtcatgcagaatccacttgagg 145
Query: 483 aagacggcgtctgccggtggaatgctctcaaacatgtcgccagcaatatacttgacactg 542
|| || |||| |||||||||||| || | ||| ||||| ||||||| || | || ||
Sbjct: 144 aacactgcgtttgccggtggaatactttgaaaaatgtcaccagcaacgtaatgcacgttg 85
Query: 543 gtgttagcgggagcattggcggcgacatgcgggagatccag 583
|||| || |||||| |||||| | ||||| |||||||||||
Sbjct: 84 gtgtcagtgggagccttggcgacaacatgtgggagatccag 44
>gb|CN151211.1|CN151211 WOUND1_74_C10.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_74_C10_A002 3', mRNA sequence
Length = 780
Score = 105 bits (53), Expect = 1e-020
Identities = 314/401 (78%)
Strand = Plus / Minus
Query: 183 tagacctcgatgatggatcgaacacctagaacgggtatgattttgtagtcgctaaatcca 242
|||| |||||| || || |||||||| |||| ||||||||||||||||| | |||||
Sbjct: 520 tagagctcgataatagaacgaacaccaagaagtggtatgattttgtagtccttgaatcct 461
Query: 243 gcttcggaaattatctttttccactcatgttcgtctcgctcggcgccattgatcgtcatg 302
|| ||| | | || || |||||||||| || ||||||||| | ||||||| ||||
Sbjct: 460 gcctcgaagaagatgttcttccactcattctcatctcgctcgaccccattgacattcatc 401
Query: 303 atgaagagatcaaacaagacctgagtctctttgtgcttaatgtttgacgactggcctcca 362
|| | ||| |||||||| ||||| |||||| |||| || | || ||||| || ||||
Sbjct: 400 atcatgaggtcaaacaaaacctgtgtctctatgtgtttgaggtctgacggctcaaatcca 341
Query: 363 acaaccatatcaacgattatcacctttcctcctgcatccctggaaggtatagctttctta 422
|| |||||||| | ||||| | ||| ||||||||||| | | |||||| |||| ||
Sbjct: 340 accaccatatctattattattatcttccctcctgcatctcgtggaggtattgcttgtttg 281
Query: 423 cagttcttgagtatcttgatacaatcagcatcgccccagtcatgcaaaacccacttaagg 482
|||||||| |||||||||| ||| ||| ||||| ||||||||||| || |||||| |||
Sbjct: 280 cagttcttcagtatcttgacacactcatcatcgtgccagtcatgcagaatccacttgagg 221
Query: 483 aagacggcgtctgccggtggaatgctctcaaacatgtcgccagcaatatacttgacactg 542
|| || |||| |||||||||||| || | ||| ||||| ||||||| || | || ||
Sbjct: 220 aacactgcgtttgccggtggaatactttgaaaaatgtcaccagcaacgtaatgcacgttg 161
Query: 543 gtgttagcgggagcattggcggcgacatgcgggagatccag 583
|||| || |||||| |||||| | ||||| |||||||||||
Sbjct: 160 gtgtcagtgggagccttggcgacaacatgtgggagatccag 120
>gb|CN149045.1|CN149045 WOUND1_60_H10.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_60_H10_A002 3', mRNA sequence
Length = 681
Score = 103 bits (52), Expect = 4e-020
Identities = 109/128 (85%)
Strand = Plus / Minus
Query: 408 ggtatagctttcttacagttcttgagtatcttgatacaatcagcatcgccccagtcatgc 467
|||||||| ||||| |||||||| | |||||||| ||| ||||| || ||||| ||||||
Sbjct: 235 ggtatagccttcttgcagttcttcaatatcttgacacattcagcgtcaccccaatcatgc 176
Query: 468 aaaacccacttaaggaagacggcgtctgccggtggaatgctctcaaacatgtcgccagca 527
| ||||||||| |||||||| | | ||||| ||||| |||||||||||||||||| |||
Sbjct: 175 agaacccacttgaggaagacaacatttgccgatggaacgctctcaaacatgtcgccggca 116
Query: 528 atatactt 535
|| |||||
Sbjct: 115 atgtactt 108
Score = 101 bits (51), Expect = 1e-019
Identities = 129/155 (83%)
Strand = Plus / Minus
Query: 178 atgggtagacctcgatgatggatcgaacacctagaacgggtatgattttgtagtcgctaa 237
||||||||||||||||||| ||||| ||||| ||||| || || || ||||| ||||
Sbjct: 459 atgggtagacctcgatgatcgatcggacacccagaacaggcattatcttgtaagacctaa 400
Query: 238 atccagcttcggaaattatctttttccactcatgttcgtctcgctcggcgccattgatcg 297
|||| ||||| |||| ||||| |||||||| | || ||||| ||||| |||||||| |
Sbjct: 399 atccggcttcaaaaatgatcttcttccactctttctcatctcgttcggctccattgatag 340
Query: 298 tcatgatgaagagatcaaacaagacctgagtctct 332
||||||| ||||||||||||||||| || ||||||
Sbjct: 339 tcatgataaagagatcaaacaagacttgcgtctct 305
>gb|CL152122.1|CL152122 104_335_10779735_116_31364_135 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10779735, DNA
sequence
Length = 699
Score = 101 bits (51), Expect = 1e-019
Identities = 129/155 (83%)
Strand = Plus / Plus
Query: 178 atgggtagacctcgatgatggatcgaacacctagaacgggtatgattttgtagtcgctaa 237
||||||||||||||||||| ||||| ||||| ||||| || || || ||||| ||||
Sbjct: 179 atgggtagacctcgatgatcgatcggacacccagaacaggcattatcttgtaagacctaa 238
Query: 238 atccagcttcggaaattatctttttccactcatgttcgtctcgctcggcgccattgatcg 297
|||| ||||| |||| ||||| |||||||| | || ||||| ||||| |||||||| |
Sbjct: 239 atccggcttcaaaaatgatcttcttccactctttctcatctcgttcggctccattgatag 298
Query: 298 tcatgatgaagagatcaaacaagacctgagtctct 332
||||||| ||||||||||||||||| || ||||||
Sbjct: 299 tcatgataaagagatcaaacaagacttgcgtctct 333
Score = 44.1 bits (22), Expect = 0.030
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 494 tgccggtggaatgctctcaaacatgtcgcc 523
||||| ||||| ||||||||||||||||||
Sbjct: 569 tgccgatggaacgctctcaaacatgtcgcc 598
>gb|CL152965.1|CL152965 104_337_10780377_116_31368_009 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10780377, DNA
sequence
Length = 583
Score = 101 bits (51), Expect = 1e-019
Identities = 129/155 (83%)
Strand = Plus / Plus
Query: 178 atgggtagacctcgatgatggatcgaacacctagaacgggtatgattttgtagtcgctaa 237
||||||||||||||||||| ||||| ||||| ||||| || || || ||||| ||||
Sbjct: 179 atgggtagacctcgatgatcgatcggacacccagaacaggcattatcttgtaagacctaa 238
Query: 238 atccagcttcggaaattatctttttccactcatgttcgtctcgctcggcgccattgatcg 297
|||| ||||| |||| ||||| |||||||| | || ||||| ||||| |||||||| |
Sbjct: 239 atccggcttcaaaaatgatcttcttccactctttctcatctcgttcggctccattgatag 298
Query: 298 tcatgatgaagagatcaaacaagacctgagtctct 332
||||||| ||||||||||||||||| || ||||||
Sbjct: 299 tcatgataaagagatcaaacaagacttgcgtctct 333
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 383,260
Number of Sequences: 832831
Number of extensions: 383260
Number of successful extensions: 105241
Number of sequences better than 0.5: 211
Number of HSP's better than 0.5 without gapping: 210
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 104518
Number of HSP's gapped (non-prelim): 639
length of query: 1228
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1208
effective length of database: 474,703,049
effective search space: 573441283192
effective search space used: 573441283192
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)