BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2276392.2.1
(644 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG464344.1|BG464344 EM1_72_E12.b1_A002 Embryo 1 (EM1) So... 638 0.0
gb|BG464672.1|BG464672 EM1_72_E12.g1_A002 Embryo 1 (EM1) So... 638 0.0
gb|BE593780.1|BE593780 WS1_102_B04.g1_A002 Water-stressed 1... 632 e-180
gb|BE638162.1|BE638162 WS1_96_B01.g1_A002 Water-stressed 1 ... 630 e-179
gb|CD463717.1|CD463717 ETH1_46_C04.b1_A002 Ethylene-treated... 630 e-179
gb|CD463769.1|CD463769 ETH1_46_C04.g1_A002 Ethylene-treated... 630 e-179
gb|CF484626.1|CF484626 POL1_26_B05.g1_A002 Pollen Sorghum b... 618 e-175
gb|BG049090.1|BG049090 OV1_23_B10.g1_A002 Ovary 1 (OV1) Sor... 581 e-164
gb|BG049101.1|BG049101 OV1_23_C10.g1_A002 Ovary 1 (OV1) Sor... 527 e-148
gb|BE592634.1|BE592634 WS1_96_B01.b1_A002 Water-stressed 1 ... 523 e-147
gb|BE594094.1|BE594094 WS1_102_B04.b1_A002 Water-stressed 1... 464 e-129
gb|CF484551.1|CF484551 POL1_26_B05.b1_A002 Pollen Sorghum b... 460 e-128
gb|CD213281.1|CD213281 HS1_29_E02.g1_A012 Heat-shocked seed... 323 1e-086
gb|BF656880.1|BF656880 OV2_22_B08.g1_A002 Ovary 2 (OV2) Sor... 315 3e-084
gb|BF657222.1|BF657222 OV2_22_B08.b1_A002 Ovary 2 (OV2) Sor... 315 3e-084
gb|CF760505.1|CF760505 DSAF1_62_A03.b1_A011 Drought-stresse... 315 3e-084
gb|CF760826.1|CF760826 DSAF1_67_C05.b1_A011 Drought-stresse... 315 3e-084
gb|AW565188.1|AW565188 LG1_328_B08.b1_A002 Light Grown 1 (L... 258 6e-067
gb|AW745189.1|AW745189 LG1_387_B08.b1_A002 Light Grown 1 (L... 258 6e-067
gb|BG047671.1|BG047671 OV1_25_B10.b1_A002 Ovary 1 (OV1) Sor... 258 6e-067
gb|BG047672.1|BG047672 OV1_25_B11.b1_A002 Ovary 1 (OV1) Sor... 258 6e-067
gb|BG047625.1|BG047625 OV1_26_B10.b1_A002 Ovary 1 (OV1) Sor... 258 6e-067
gb|BG241242.1|BG241242 OV1_39_H08.b1_A002 Ovary 1 (OV1) Sor... 258 6e-067
gb|CD431590.1|CD431590 ETH1_9_E04.g1_A002 Ethylene-treated ... 258 6e-067
gb|CX610191.1|CX610191 ANR1_17_E02.b1_A002 Anaerobic roots ... 250 1e-064
gb|CX610277.1|CX610277 ANR1_17_E02.g1_A002 Anaerobic roots ... 250 1e-064
gb|CX607974.1|CX607974 ANR1_31_H04.g1_A002 Anaerobic roots ... 242 3e-062
gb|BE125936.1|BE125936 DG1_59_H04.b1_A002 Dark Grown 1 (DG1... 232 3e-059
gb|CF073951.1|CF073951 FE1_9_D04.b1_A002 Iron-deficient see... 228 5e-058
gb|BE357221.1|BE357221 DG1_147_B08.g1_A002 Dark Grown 1 (DG... 222 3e-056
gb|CF760792.1|CF760792 DSAF1_66_G02.b1_A011 Drought-stresse... 202 3e-050
gb|CF761895.1|CF761895 DSAF1_83_B05.b1_A011 Drought-stresse... 202 3e-050
gb|AW745256.1|AW745256 LG1_387_B08.g1_A002 Light Grown 1 (L... 190 1e-046
gb|CX607888.1|CX607888 ANR1_31_H04.b1_A002 Anaerobic roots ... 190 1e-046
gb|BE593995.1|BE593995 WS1_104_H08.g1_A002 Water-stressed 1... 149 4e-034
gb|AI723943.1|AI723943 RHIZ1_36_A12.y1_A001 Rhizome1 (RHIZ1... 143 2e-032
gb|BZ627714.1|BZ627714 ih54e06.g1 WGS-SbicolorF (DH5a methy... 135 6e-030
gb|CW196828.1|CW196828 104_621_11181370_148_36819_047 Sorgh... 135 6e-030
gb|CW385171.1|CW385171 fsbb001f068i20f0 Sorghum methylation... 135 6e-030
gb|CL177611.1|CL177611 104_385_10893953_116_31914_017 Sorgh... 133 2e-029
gb|AI724087.1|AI724087 RHIZ1_5_B10.y2_A001 Rhizome1 (RHIZ1)... 121 8e-026
gb|CL158096.1|CL158096 104_346_10803303_116_31376_279 Sorgh... 109 3e-022
gb|CW092969.1|CW092969 104_455_10999487_114_33047_084 Sorgh... 109 3e-022
gb|CW235145.1|CW235145 104_690_11214826_148_37412_041 Sorgh... 109 3e-022
gb|CF761712.1|CF761712 DSAF1_80_A02.g1_A011 Drought-stresse... 107 1e-021
gb|CW235144.1|CW235144 104_690_11214826_116_37408_041 Sorgh... 98 1e-018
gb|CW462610.1|CW462610 fsbb001f210n11k0 Sorghum methylation... 98 1e-018
gb|CL158095.1|CL158095 104_346_10803303_114_31375_279 Sorgh... 88 1e-015
gb|CW054019.1|CW054019 104_294_10516295_114_30182 Sorghum m... 88 1e-015
gb|CW329758.1|CW329758 104_826_11480014_116_35998_089 Sorgh... 88 1e-015
gb|CW329759.1|CW329759 104_826_11480014_148_35997_089 Sorgh... 88 1e-015
gb|CW451282.1|CW451282 fsbb001f191e17f0 Sorghum methylation... 88 1e-015
gb|AW922577.1|AW922577 DG1_45_F04.g1_A002 Dark Grown 1 (DG1... 80 3e-013
gb|CF487818.1|CF487818 POL1_46_C09.b1_A002 Pollen Sorghum b... 66 4e-009
gb|CF487899.1|CF487899 POL1_46_C09.g1_A002 Pollen Sorghum b... 66 4e-009
>gb|BG464344.1|BG464344 EM1_72_E12.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 600
Score = 638 bits (322), Expect = 0.0
Identities = 394/418 (94%)
Strand = Plus / Plus
Query: 6 gagaggaagagcgcgcggagagtgagagcccgggagaagcagcggctgggggtaagatgg 65
|||||||||||||||||||||| |||||||||||||||| ||||| || || |||||||
Sbjct: 14 gagaggaagagcgcgcggagagccagagcccgggagaagcggcggccggcggcaagatgg 73
Query: 66 tgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccagacccgcg 125
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 74 tgcagcggctcacctaccggaagcggcatagctacgccaccaaatccaaccagacccgcg 133
Query: 126 tcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcgagcggac 185
|||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 134 tcgtcaagacccctggcgggaggcttgtgtaccagtacaccaagaagcgcgcgagcggac 193
Query: 186 cgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctgctgagt 245
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 cgaagtgccccgtcaccgggaagaagatccaaggaattccacacctgagacctgctgagt 253
Query: 246 acaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcggtgttc 305
||||||||||||||||| ||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 254 acaagaggtccaggttgtcaaggaaccgcaggactgtgaaccgtccatatggtggtgttc 313
Query: 306 tgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaacagaaga 365
||||||||||||||||||| |||||||||||||| ||||||||||| ||||| |||||||
Sbjct: 314 tgtctggtactgcagttagagagaggatcatccgtgcctttttggtcgaggagcagaaga 373
Query: 366 tagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagctagac 423
| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 374 tcgtgaagaaggtgttgaagatccaaaagaccaaggacaaggcctccaagagctagac 431
Score = 101 bits (51), Expect = 8e-020
Identities = 110/127 (86%), Gaps = 7/127 (5%)
Strand = Plus / Plus
Query: 432 ccacaatgtttgagtcca-ttcgaatttatttcagcaggaaaatttctcgcgggtatggg 490
||||||||||| |||| | ||||||||| |||| ||| |||| ||||||| |||| ||||
Sbjct: 454 ccacaatgtttaagtcaaattcgaatttgtttcggcaagaaattttctcgtgggtttggg 513
Query: 491 gaatcttggtacttatgctagtagtatgtgagatgggtgtg---gtttaaattttgagcg 547
||||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||
Sbjct: 514 gaatcctggtacttatgc---tagtatgtgagatggatgtggttgtttaaattttgagcg 570
Query: 548 taagttg 554
|||||||
Sbjct: 571 taagttg 577
>gb|BG464672.1|BG464672 EM1_72_E12.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 521
Score = 638 bits (322), Expect = 0.0
Identities = 394/418 (94%)
Strand = Plus / Plus
Query: 6 gagaggaagagcgcgcggagagtgagagcccgggagaagcagcggctgggggtaagatgg 65
|||||||||||||||||||||| |||||||||||||||| ||||| || || |||||||
Sbjct: 14 gagaggaagagcgcgcggagagccagagcccgggagaagcggcggccggcggcaagatgg 73
Query: 66 tgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccagacccgcg 125
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 74 tgcagcggctcacctaccggaagcggcatagctacgccaccaaatccaaccagacccgcg 133
Query: 126 tcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcgagcggac 185
|||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 134 tcgtcaagacccctggcgggaggcttgtgtaccagtacaccaagaagcgcgcgagcggac 193
Query: 186 cgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctgctgagt 245
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 cgaagtgccccgtcaccgggaagaagatccaaggaattccacacctgagacctgctgagt 253
Query: 246 acaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcggtgttc 305
||||||||||||||||| ||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 254 acaagaggtccaggttgtcaaggaaccgcaggactgtgaaccgtccatatggtggtgttc 313
Query: 306 tgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaacagaaga 365
||||||||||||||||||| |||||||||||||| ||||||||||| ||||| |||||||
Sbjct: 314 tgtctggtactgcagttagagagaggatcatccgtgcctttttggtcgaggagcagaaga 373
Query: 366 tagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagctagac 423
| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 374 tcgtgaagaaggtgttgaagatccaaaagaccaaggacaaggcctccaagagctagac 431
Score = 42.1 bits (21), Expect = 0.062
Identities = 55/65 (84%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 432 ccacaatgtttgagtc-cattcgaatttatttcagcaggaaaatttctcgcgggtatggg 490
||||||||||| |||| ||| |||||| |||| ||| |||| ||||||| |||| ||||
Sbjct: 454 ccacaatgtttaagtcaaattagaatttgtttcggcaagaaattttctcgtgggtttggg 513
Query: 491 gaatc 495
|||||
Sbjct: 514 gaatc 518
>gb|BE593780.1|BE593780 WS1_102_B04.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 529
Score = 632 bits (319), Expect = e-180
Identities = 394/419 (94%)
Strand = Plus / Plus
Query: 5 ggagaggaagagcgcgcggagagtgagagcccgggagaagcagcggctgggggtaagatg 64
||||||||||||||||||||||| |||||||||||||||| ||||| || || ||||||
Sbjct: 8 ggagaggaagagcgcgcggagagccagagcccgggagaagcggcggccggcggcaagatg 67
Query: 65 gtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccagacccgc 124
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 68 gtgcagcggctcacctaccggaagcggcatagctacgccaccaaatccaaccagacccgc 127
Query: 125 gtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcgagcgga 184
||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||| |
Sbjct: 128 gtcgtcaagacccctggcgggaggcttgtgtaccagtacaccaagaagcgcgcgagcgca 187
Query: 185 ccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctgctgag 244
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ccgaagtgccccgtcaccgggaagaagatccaaggaattccacacctgagacctgctgag 247
Query: 245 tacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcggtgtt 304
|||||||||||||||||| ||||||||| ||||||||||| ||||||||||| ||||||
Sbjct: 248 tacaagaggtccaggttgtcaaggaaccgcaggactgtgaaccgtccatatggtggtgtt 307
Query: 305 ctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaacagaag 364
|||||||||||||||||||| |||||||||||||| ||||||||||| ||||| ||||||
Sbjct: 308 ctgtctggtactgcagttagagagaggatcatccgtgcctttttggtcgaggagcagaag 367
Query: 365 atagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagctagac 423
|| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 368 atcgtgaagaaggtgttgaagatccaaaagaccaaggacaaggcctccaagagctagac 426
Score = 46.1 bits (23), Expect = 0.004
Identities = 72/83 (86%), Gaps = 4/83 (4%)
Strand = Plus / Plus
Query: 432 ccacaatgtttgagtcca-ttcgaatttatttcagcaggaaaatttctcgcgggtatggg 490
||||||||||| |||| | ||||||||| |||| ||| |||| ||||||| |||| ||||
Sbjct: 449 ccacaatgtttaagtcaaattcgaatttttttcggcaagaaa-tttctcg-gggtttggg 506
Query: 491 gaat-cttggtacttatgctagt 512
|||| | ||||||||||||||||
Sbjct: 507 gaattcctggtacttatgctagt 529
>gb|BE638162.1|BE638162 WS1_96_B01.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 638
Score = 630 bits (318), Expect = e-179
Identities = 390/414 (94%)
Strand = Plus / Plus
Query: 10 ggaagagcgcgcggagagtgagagcccgggagaagcagcggctgggggtaagatggtgca 69
|||||||||||||||||| |||||||||||||||| ||||| || || |||||||||||
Sbjct: 9 ggaagagcgcgcggagagccagagcccgggagaagcggcggccggcggcaagatggtgca 68
Query: 70 gcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccagacccgcgtcgt 129
|||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 69 gcggctcacctaccggaagcggcatagctacgccaccaaatccaaccagacccgcgtcgt 128
Query: 130 caagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcgagcggaccgaa 189
|||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 caagacccctggcgggaggcttgtgtaccagtacaccaagaagcgcgcgagcggaccgaa 188
Query: 190 gtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctgctgagtacaa 249
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 gtgccccgtcaccgggaagaagatccaaggaattccacacctgagacctgctgagtacaa 248
Query: 250 gaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcggtgttctgtc 309
||||||||||||| ||||||||| ||||||||||| ||||||||||| |||||||||||
Sbjct: 249 gaggtccaggttgtcaaggaaccgcaggactgtgaaccgtccatatggtggtgttctgtc 308
Query: 310 tggtactgcagttagggagaggatcatccgcgcctttttggttgaggaacagaagatagt 369
||||||||||||||| |||||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 309 tggtactgcagttagagagaggatcatccgtgcctttttggtcgaggagcagaagatcgt 368
Query: 370 gaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagctagac 423
||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 369 gaagaaggtgttgaagatccaaaagaccaaggacaaggcctccaagagctagac 422
Score = 101 bits (51), Expect = 8e-020
Identities = 110/127 (86%), Gaps = 7/127 (5%)
Strand = Plus / Plus
Query: 432 ccacaatgtttgagtcca-ttcgaatttatttcagcaggaaaatttctcgcgggtatggg 490
||||||||||| |||| | ||||||||| |||| ||| |||| ||||||| |||| ||||
Sbjct: 445 ccacaatgtttaagtcaaattcgaatttgtttcggcaagaaattttctcgtgggtttggg 504
Query: 491 gaatcttggtacttatgctagtagtatgtgagatgggtgtg---gtttaaattttgagcg 547
||||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||
Sbjct: 505 gaatcctggtacttatgc---tagtatgtgagatggatgtggttgtttaaattttgagcg 561
Query: 548 taagttg 554
|||||||
Sbjct: 562 taagttg 568
>gb|CD463717.1|CD463717 ETH1_46_C04.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_46_C04_A002 3', mRNA sequence
Length = 660
Score = 630 bits (318), Expect = e-179
Identities = 393/418 (94%)
Strand = Plus / Plus
Query: 6 gagaggaagagcgcgcggagagtgagagcccgggagaagcagcggctgggggtaagatgg 65
|||||||||||||||||||||| |||||||||||||||| ||||| || || |||||||
Sbjct: 25 gagaggaagagcgcgcggagagccagagcccgggagaagcggcggccggcggcaagatgg 84
Query: 66 tgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccagacccgcg 125
||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 85 tgcagcggctcacctactggaagcggcatagctacgccaccaaatccaaccagacccgcg 144
Query: 126 tcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcgagcggac 185
|||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 145 tcgtcaagacccctggcgggaggcttgtgtaccagtacaccaagaagcgcgcgagcggac 204
Query: 186 cgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctgctgagt 245
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 cgaagtgccccgtcaccgggaagaagatccaaggaattccacacctgagacctgctgagt 264
Query: 246 acaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcggtgttc 305
||||||||||||||||| ||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 265 acaagaggtccaggttgtcaaggaaccgcaggactgtgaaccgtccatatggtggtgttc 324
Query: 306 tgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaacagaaga 365
||||||||||||||||||| |||||||||||||| ||||||||||| ||||| |||||||
Sbjct: 325 tgtctggtactgcagttagagagaggatcatccgtgcctttttggtcgaggagcagaaga 384
Query: 366 tagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagctagac 423
| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 385 tcgtgaagaaggtgttgaagatccaaaagaccaaggacaaggcctccaagagctagac 442
Score = 101 bits (51), Expect = 8e-020
Identities = 110/127 (86%), Gaps = 7/127 (5%)
Strand = Plus / Plus
Query: 432 ccacaatgtttgagtcca-ttcgaatttatttcagcaggaaaatttctcgcgggtatggg 490
||||||||||| |||| | ||||||||| |||| ||| |||| ||||||| |||| ||||
Sbjct: 465 ccacaatgtttaagtcaaattcgaatttgtttcggcaagaaattttctcgtgggtttggg 524
Query: 491 gaatcttggtacttatgctagtagtatgtgagatgggtgtg---gtttaaattttgagcg 547
||||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||
Sbjct: 525 gaatcctggtacttatgc---tagtatgtgagatggatgtggttgtttaaattttgagcg 581
Query: 548 taagttg 554
|||||||
Sbjct: 582 taagttg 588
>gb|CD463769.1|CD463769 ETH1_46_C04.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_46_C04_A002 5', mRNA sequence
Length = 620
Score = 630 bits (318), Expect = e-179
Identities = 393/418 (94%)
Strand = Plus / Plus
Query: 6 gagaggaagagcgcgcggagagtgagagcccgggagaagcagcggctgggggtaagatgg 65
|||||||||||||||||||||| |||||||||||||||| ||||| || || |||||||
Sbjct: 24 gagaggaagagcgcgcggagagccagagcccgggagaagcggcggccggcggcaagatgg 83
Query: 66 tgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccagacccgcg 125
||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 84 tgcagcggctcacctactggaagcggcatagctacgccaccaaatccaaccagacccgcg 143
Query: 126 tcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcgagcggac 185
|||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 144 tcgtcaagacccctggcgggaggcttgtgtaccagtacaccaagaagcgcgcgagcggac 203
Query: 186 cgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctgctgagt 245
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 cgaagtgccccgtcaccgggaagaagatccaaggaattccacacctgagacctgctgagt 263
Query: 246 acaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcggtgttc 305
||||||||||||||||| ||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 264 acaagaggtccaggttgtcaaggaaccgcaggactgtgaaccgtccatatggtggtgttc 323
Query: 306 tgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaacagaaga 365
||||||||||||||||||| |||||||||||||| ||||||||||| ||||| |||||||
Sbjct: 324 tgtctggtactgcagttagagagaggatcatccgtgcctttttggtcgaggagcagaaga 383
Query: 366 tagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagctagac 423
| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 384 tcgtgaagaaggtgttgaagatccaaaagaccaaggacaaggcctccaagagctagac 441
Score = 101 bits (51), Expect = 8e-020
Identities = 110/127 (86%), Gaps = 7/127 (5%)
Strand = Plus / Plus
Query: 432 ccacaatgtttgagtcca-ttcgaatttatttcagcaggaaaatttctcgcgggtatggg 490
||||||||||| |||| | ||||||||| |||| ||| |||| ||||||| |||| ||||
Sbjct: 464 ccacaatgtttaagtcaaattcgaatttgtttcggcaagaaattttctcgtgggtttggg 523
Query: 491 gaatcttggtacttatgctagtagtatgtgagatgggtgtg---gtttaaattttgagcg 547
||||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||
Sbjct: 524 gaatcctggtacttatgc---tagtatgtgagatggatgtggttgtttaaattttgagcg 580
Query: 548 taagttg 554
|||||||
Sbjct: 581 taagttg 587
>gb|CF484626.1|CF484626 POL1_26_B05.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_26_B05_A002 5', mRNA sequence
Length = 567
Score = 618 bits (312), Expect = e-175
Identities = 391/418 (93%)
Strand = Plus / Plus
Query: 6 gagaggaagagcgcgcggagagtgagagcccgggagaagcagcggctgggggtaagatgg 65
|||||||||||||||||||||| |||||||||||||||| ||||| | || |||||||
Sbjct: 30 gagaggaagagcgcgcggagagccagagcccgggagaagcggcggcctgcggcaagatgg 89
Query: 66 tgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccagacccgcg 125
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 90 tgcagcggctcacctaccggaagcggcatagctacgccaccaaatccaaccagacccgcg 149
Query: 126 tcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcgagcggac 185
|||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 150 tcgtcaagacccctggcgggaggcttgtgtaccagtacaccaagaagcgcgcgagcggac 209
Query: 186 cgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctgctgagt 245
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 cgaagtgccccgtcaccgggaagaagatccaaggaattccacacctgagacctgctgagt 269
Query: 246 acaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcggtgttc 305
||||||||||||||||| ||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 270 acaagaggtccaggttgtcaaggaaccgcaggactgtgaaccgtccatatggtggtgttc 329
Query: 306 tgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaacagaaga 365
||||||||||||||||||| |||||||||||||| ||||||||||| ||||| |||||||
Sbjct: 330 tgtctggtactgcagttagagagaggatcatccgtgcctttttggtcgaggagcagaaga 389
Query: 366 tagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagctagac 423
| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 390 tcgtgaagaaggtgttgaagatccaaaagaccaaggacaaggcctccnngagctagac 447
Score = 77.8 bits (39), Expect = 1e-012
Identities = 87/101 (86%), Gaps = 4/101 (3%)
Strand = Plus / Plus
Query: 432 ccacaatgtttgagtcca-ttcgaatttatttcagcaggaaaatttctcgcgggtatggg 490
||||||||||| |||| | ||||||||| |||| ||| |||| ||||||| |||| ||||
Sbjct: 470 ccacaatgtttaagtcaaattcgaatttgtttcggcaagaaattttctcgtgggtttggg 529
Query: 491 gaatcttggtacttatgctagtagtatgtgagatgggtgtg 531
||||| ||||||||||||||||| |||||||||| ||||
Sbjct: 530 gaatcctggtacttatgctagta---tgtgagatggatgtg 567
>gb|BG049090.1|BG049090 OV1_23_B10.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 575
Score = 581 bits (293), Expect = e-164
Identities = 347/365 (95%)
Strand = Plus / Plus
Query: 59 aagatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccag 118
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 14 aagatggtgcagcggctcacctaccggaagcggcatagctacgccaccaaatccaaccag 73
Query: 119 acccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcg 178
||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 74 acccgcgtcgtcaagacccctggcgggaggcttgtgtaccagtacaccaagaagcgcgcg 133
Query: 179 agcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacct 238
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 agcggaccgaagtgccccgtcaccgggaagaagatccaaggaattccacacctgagacct 193
Query: 239 gctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggc 298
|||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||
Sbjct: 194 gctgagtacaagaggtccaggttgtcaaggaaccgcaggactgtgaaccgtccatatggt 253
Query: 299 ggtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaa 358
|||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||
Sbjct: 254 ggtgttctgtctggtactgcagttagagagaggatcatccgtgcctttttggtcgaggag 313
Query: 359 cagaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagc 418
|||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 314 cagaagatcgtgaagaaggtgttgaagatccaaaagaccaaggacaaggcctccaagagc 373
Query: 419 tagac 423
|||||
Sbjct: 374 tagac 378
Score = 101 bits (51), Expect = 8e-020
Identities = 110/127 (86%), Gaps = 7/127 (5%)
Strand = Plus / Plus
Query: 432 ccacaatgtttgagtcca-ttcgaatttatttcagcaggaaaatttctcgcgggtatggg 490
||||||||||| |||| | ||||||||| |||| ||| |||| ||||||| |||| ||||
Sbjct: 401 ccacaatgtttaagtcaaattcgaatttgtttcggcaagaaattttctcgtgggtttggg 460
Query: 491 gaatcttggtacttatgctagtagtatgtgagatgggtgtg---gtttaaattttgagcg 547
||||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||
Sbjct: 461 gaatcctggtacttatgc---tagtatgtgagatggatgtggttgtttaaattttgagcg 517
Query: 548 taagttg 554
|||||||
Sbjct: 518 taagttg 524
>gb|BG049101.1|BG049101 OV1_23_C10.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 508
Score = 527 bits (266), Expect = e-148
Identities = 320/338 (94%)
Strand = Plus / Plus
Query: 86 aagcggcacagctacgccaccaaatcgaaccagacccgcgtcgtcaagacacctggtggg 145
|||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| |||
Sbjct: 1 aagcggcatagctacgccaccaaatccaaccagacccgcgtcgtcaagacccctggcggg 60
Query: 146 aaacttgtgtaccagtacaccaagaagcgcgcgagcggaccgaagtgcccagtcaccggg 205
| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 61 aggcttgtgtaccagtacaccaagaagcgcgcgagcggaccgaagtgccccgtcaccggg 120
Query: 206 aagaagatccaaggaattccacacctgagacctgctgagtacaagaggtccaggttggca 265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 121 aagaagatccaaggaattccacacctgagacctgctgagtacaagaggtccaggttgtca 180
Query: 266 aggaaccaaaggactgtgaatcgtccatatggcggtgttctgtctggtactgcagttagg 325
||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 181 aggaaccgcaggactgtgaaccgtccatatggtggtgttctgtctggtactgcagttaga 240
Query: 326 gagaggatcatccgcgcctttttggttgaggaacagaagatagtgaagaaggtgttgaag 385
|||||||||||||| ||||||||||| ||||| |||||||| ||||||||||||||||||
Sbjct: 241 gagaggatcatccgtgcctttttggtcgaggagcagaagatcgtgaagaaggtgttgaag 300
Query: 386 atccaaaagaccaaggataaggcctccaagagctagac 423
||||||||||||||||| ||||||||||||||||||||
Sbjct: 301 atccaaaagaccaaggacaaggcctccaagagctagac 338
Score = 101 bits (51), Expect = 8e-020
Identities = 110/127 (86%), Gaps = 7/127 (5%)
Strand = Plus / Plus
Query: 432 ccacaatgtttgagtcca-ttcgaatttatttcagcaggaaaatttctcgcgggtatggg 490
||||||||||| |||| | ||||||||| |||| ||| |||| ||||||| |||| ||||
Sbjct: 361 ccacaatgtttaagtcaaattcgaatttgtttcggcaagaaattttctcgtgggtttggg 420
Query: 491 gaatcttggtacttatgctagtagtatgtgagatgggtgtg---gtttaaattttgagcg 547
||||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||
Sbjct: 421 gaatcctggtacttatgc---tagtatgtgagatggatgtggttgtttaaattttgagcg 477
Query: 548 taagttg 554
|||||||
Sbjct: 478 taagttg 484
>gb|BE592634.1|BE592634 WS1_96_B01.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 363
Score = 523 bits (264), Expect = e-147
Identities = 327/348 (93%)
Strand = Plus / Plus
Query: 10 ggaagagcgcgcggagagtgagagcccgggagaagcagcggctgggggtaagatggtgca 69
|||||||||||||||||| |||||||||||||||| ||||| || || |||||||||||
Sbjct: 9 ggaagagcgcgcggagagccagagcccgggagaagcggcggccggcggcaagatggtgca 68
Query: 70 gcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccagacccgcgtcgt 129
|||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 69 gcggctcacctaccggaagcggcatagctacgccaccaaatccaaccagacccgcgtcgt 128
Query: 130 caagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcgagcggaccgaa 189
|||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 caagacccctggcgggaggcttgtgtaccagtacaccaagaagcgcgcgagcggaccgaa 188
Query: 190 gtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctgctgagtacaa 249
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 gtgccccgtcaccgggaagaagatccaaggaattccacacctgagacctgctgagtacaa 248
Query: 250 gaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcggtgttctgtc 309
||||||||||||| ||||||||| ||||||||||| ||||||||||| |||||||||||
Sbjct: 249 gaggtccaggttgtcaaggaaccgcaggactgtgaaccgtccatatggtggtgttctgtc 308
Query: 310 tggtactgcagttagggagaggatcatccgcgcctttttggttgagga 357
||||||||||||||| |||||||||||||| ||||||||||| |||||
Sbjct: 309 tggtactgcagttagagagaggatcatccgtgcctttttggtcgagga 356
>gb|BE594094.1|BE594094 WS1_102_B04.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 321
Score = 464 bits (234), Expect = e-129
Identities = 294/314 (93%)
Strand = Plus / Plus
Query: 5 ggagaggaagagcgcgcggagagtgagagcccgggagaagcagcggctgggggtaagatg 64
||||||||||||||||||||||| |||||||||||||||| ||||| || || ||||||
Sbjct: 8 ggagaggaagagcgcgcggagagccagagcccgggagaagcggcggccggcggcaagatg 67
Query: 65 gtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccagacccgc 124
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 68 gtgcagcggctcacctaccggaagcggcatagctacgccaccaaatccaaccagacccgc 127
Query: 125 gtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcgagcgga 184
||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||| |
Sbjct: 128 gtcgtcaagacccctggcgggaggcttgtgtaccagtacaccaagaagcgcgcgagcgca 187
Query: 185 ccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctgctgag 244
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ccgaagtgccccgtcaccgggaagaagatccaaggaattccacacctgagacctgctgag 247
Query: 245 tacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcggtgtt 304
|||||||||||||||||| ||||||||| ||||||||||| ||||||||||| ||||||
Sbjct: 248 tacaagaggtccaggttgtcaaggaaccgcaggactgtgaaccgtccatatggtggtgtt 307
Query: 305 ctgtctggtactgc 318
||||||||| ||||
Sbjct: 308 ctgtctggtgctgc 321
>gb|CF484551.1|CF484551 POL1_26_B05.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_26_B05_A002 3', mRNA sequence
Length = 576
Score = 460 bits (232), Expect = e-128
Identities = 370/416 (88%)
Strand = Plus / Plus
Query: 6 gagaggaagagcgcgcggagagtgagagcccgggagaagcagcggctgggggtaagatgg 65
||||||||||||||||||||| ||| |||||||||||| ||| | | || |||||||
Sbjct: 6 gagaggaagagcgcgcggagacccagaccccgggagaagcggcgccctgcggcaagatgg 65
Query: 66 tgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccagacccgcg 125
||||||||||||||| |||||||||||| ||||||||||||||||| | ||||||||| |
Sbjct: 66 tgcagcggctcacctcccggaagcggcatagctacgccaccaaatccacccagacccggg 125
Query: 126 tcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcgagcggac 185
|||||||| | ||||| |||| ||||||| ||||| ||||||||||||||||||||| |
Sbjct: 126 tcgtcaagccccctggcgggaggcttgtgtcccagtccaccaagaagcgcgcgagcggcc 185
Query: 186 cgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctgctgagt 245
|||||| ||| ||| ||||||||||||||||||||||||| | |||||| ||||||||||
Sbjct: 186 cgaagtcccccgtccccgggaagaagatccaaggaattccccccctgagccctgctgagt 245
Query: 246 acaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcggtgttc 305
||||||||||||||||| |||||| || |||||||||| ||||||||||| |||||||
Sbjct: 246 acaagaggtccaggttgtcaaggacccgcaggactgtgacccgtccatatggtggtgttc 305
Query: 306 tgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaacagaaga 365
||||||||||||||||||| |||||||||||||| |||||||||| ||||| |||||||
Sbjct: 306 tgtctggtactgcagttagagagaggatcatccgtccctttttggtcgaggagcagaaga 365
Query: 366 tagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagctag 421
| ||||||||||||||||||||||||||| |||||| ||| ||||||||||||||
Sbjct: 366 tcgtgaagaaggtgttgaagatccaaaagcccaaggccaagccctccaagagctag 421
Score = 89.7 bits (45), Expect = 3e-016
Identities = 94/109 (86%), Gaps = 6/109 (5%)
Strand = Plus / Plus
Query: 449 attcgaatttatttcagcaggaaaatttctcgcgggtatggggaatcttggtacttatgc 508
|||||||||| |||| || |||| ||||||| |||| ||||||||| ||||||||||||
Sbjct: 464 attcgaatttgtttcgccaagaaattttctcgtgggtttggggaatcctggtacttatgc 523
Query: 509 tagtagtatgtgagatgggtgtg---gtttaaattttgagcgtaagttg 554
||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 524 ---tagtatgtgagatggatgtggttgtttaaattttgagcgtaagttg 569
>gb|CD213281.1|CD213281 HS1_29_E02.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_29_E02_A012 5', mRNA sequence
Length = 570
Score = 323 bits (163), Expect = 1e-086
Identities = 298/343 (86%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||| ||||||||||||||||| ||||||||||| ||||| || |||||||
Sbjct: 53 agatggtgcagcgcctcacctaccggaagcgtcacagctacgcgaccaagtccaaccaga 112
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
|||| ||||||||||| || |||||||| ||||||||||||||||| |||||| | ||||
Sbjct: 113 cccgggtcgtcaagaccccaggtgggaagcttgtgtaccagtacacgaagaagagggcga 172
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
|||| || |||||||| |||||||||||||||||||| || || || ||| | || ||||
Sbjct: 173 gcgggcccaagtgccccgtcaccgggaagaagatccaggggatcccccacttaaggcctg 232
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
|||||||||| |||||||||||| | ||||||| ||||||||||| |||||||||||||
Sbjct: 233 ctgagtacaaaaggtccaggttgtctaggaaccgcaggactgtgaaccgtccatatggcg 292
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
| || || ||||| | ||| ||||||||||| |||||||| || || |||||||||||||
Sbjct: 293 gagtactctctggaattgctgttagggagagaatcatccgtgctttcttggttgaggaac 352
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaagga 402
||||||| || |||||||| |||| || || |||||||||||
Sbjct: 353 agaagattgtcaagaaggtcctgaaaatacagaagaccaagga 395
>gb|BF656880.1|BF656880 OV2_22_B08.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 571
Score = 315 bits (159), Expect = 3e-084
Identities = 279/319 (87%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||| ||||||||||||||||| ||||||||||| ||||| || |||||||
Sbjct: 37 agatggtgcagcgcctcacctaccggaagcgtcacagctacgcgaccaagtccaaccaga 96
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
|||| ||||||||||| ||||||||||| ||||||||||||||||| |||||| | ||||
Sbjct: 97 cccgggtcgtcaagacccctggtgggaagcttgtgtaccagtacacgaagaagagggcga 156
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
|||| || |||||||| |||||||||||||||||||| || || || ||| | || ||||
Sbjct: 157 gcgggcccaagtgccccgtcaccgggaagaagatccaggggatcccccacttaaggcctg 216
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
|||||||||| |||||||||||| | ||||||| ||||||||||| ||||||||||| |
Sbjct: 217 ctgagtacaaaaggtccaggttgtctaggaaccgcaggactgtgaaccgtccatatggtg 276
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
| || || ||||| | ||| ||||||||||| |||||||| || || |||||||||||||
Sbjct: 277 gagtactctctggaattgctgttagggagagaatcatccgtgctttcttggttgaggaac 336
Query: 360 agaagatagtgaagaaggt 378
||||||| || ||||||||
Sbjct: 337 agaagattgtcaagaaggt 355
>gb|BF657222.1|BF657222 OV2_22_B08.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 545
Score = 315 bits (159), Expect = 3e-084
Identities = 279/319 (87%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||| ||||||||||||||||| ||||||||||| ||||| || |||||||
Sbjct: 37 agatggtgcagcgcctcacctaccggaagcgtcacagctacgcgaccaagtccaaccaga 96
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
|||| ||||||||||| ||||||||||| ||||||||||||||||| |||||| | ||||
Sbjct: 97 cccgggtcgtcaagacccctggtgggaagcttgtgtaccagtacacgaagaagagggcga 156
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
|||| || |||||||| |||||||||||||||||||| || || || ||| | || ||||
Sbjct: 157 gcgggcccaagtgccccgtcaccgggaagaagatccaggggatcccccacttaaggcctg 216
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
|||||||||| |||||||||||| | ||||||| ||||||||||| ||||||||||| |
Sbjct: 217 ctgagtacaaaaggtccaggttgtctaggaaccgcaggactgtgaaccgtccatatggtg 276
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
| || || ||||| | ||| ||||||||||| |||||||| || || |||||||||||||
Sbjct: 277 gagtactctctggaattgctgttagggagagaatcatccgtgctttcttggttgaggaac 336
Query: 360 agaagatagtgaagaaggt 378
||||||| || ||||||||
Sbjct: 337 agaagattgtcaagaaggt 355
>gb|CF760505.1|CF760505 DSAF1_62_A03.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_62_A03_A011 5', mRNA sequence
Length = 338
Score = 315 bits (159), Expect = 3e-084
Identities = 279/319 (87%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||| ||||||||||||||||| ||||||||||| ||||| || |||||||
Sbjct: 15 agatggtgcagcgcctcacctaccggaagcgtcacagctacgcgaccaagtccaaccaga 74
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
|||| ||||||||||| ||||||||||| ||||||||||||||||| |||||| | ||||
Sbjct: 75 cccgggtcgtcaagacccctggtgggaagcttgtgtaccagtacacgaagaagagggcga 134
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
|||| || |||||||| |||||||||||||||||||| || || || ||| | || ||||
Sbjct: 135 gcgggcccaagtgccccgtcaccgggaagaagatccaggggatcccccacttaaggcctg 194
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
|||||||||| |||||||||||| | ||||||| ||||||||||| ||||||||||| |
Sbjct: 195 ctgagtacaaaaggtccaggttgtctaggaaccgcaggactgtgaaccgtccatatggtg 254
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
| || || ||||| | ||| ||||||||||| |||||||| || || |||||||||||||
Sbjct: 255 gagtactctctggaattgctgttagggagagaatcatccgtgctttcttggttgaggaac 314
Query: 360 agaagatagtgaagaaggt 378
||||||| || ||||||||
Sbjct: 315 agaagattgtcaagaaggt 333
>gb|CF760826.1|CF760826 DSAF1_67_C05.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_67_C05_A011 5', mRNA sequence
Length = 549
Score = 315 bits (159), Expect = 3e-084
Identities = 279/319 (87%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||| ||||||||||||||||| ||||||||||| ||||| || |||||||
Sbjct: 33 agatggtgcagcgcctcacctaccggaagcgtcacagctacgcgaccaagtccaaccaga 92
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
|||| ||||||||||| ||||||||||| ||||||||||||||||| |||||| | ||||
Sbjct: 93 cccgggtcgtcaagacccctggtgggaagcttgtgtaccagtacacgaagaagagggcga 152
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
|||| || |||||||| |||||||||||||||||||| || || || ||| | || ||||
Sbjct: 153 gcgggcccaagtgccccgtcaccgggaagaagatccaggggatcccccacttaaggcctg 212
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
|||||||||| |||||||||||| | ||||||| ||||||||||| ||||||||||| |
Sbjct: 213 ctgagtacaaaaggtccaggttgtctaggaaccgcaggactgtgaaccgtccatatggtg 272
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
| || || ||||| | ||| ||||||||||| |||||||| || || |||||||||||||
Sbjct: 273 gagtactctctggaattgctgttagggagagaatcatccgtgctttcttggttgaggaac 332
Query: 360 agaagatagtgaagaaggt 378
||||||| || ||||||||
Sbjct: 333 agaagattgtcaagaaggt 351
>gb|AW565188.1|AW565188 LG1_328_B08.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 593
Score = 258 bits (130), Expect = 6e-067
Identities = 277/326 (84%)
Strand = Plus / Plus
Query: 59 aagatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccag 118
|||||||||||||| || |||||||| |||||||||||||| ||||| || || ||||||
Sbjct: 41 aagatggtgcagcgtctgacctaccgcaagcggcacagctatgccacaaagtccaaccag 100
Query: 119 acccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcg 178
|| || ||||||||||| |||||||| || || ||||||||||||||||||||| | ||
Sbjct: 101 acgcgggtcgtcaagacccctggtggtaagctcgtgtaccagtacaccaagaagagagcc 160
Query: 179 agcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacct 238
||||| || |||||||| || ||||||||||||||||| || ||||| || || || |||
Sbjct: 161 agcgggcccaagtgccccgtgaccgggaagaagatccaggggattccccatcttaggcct 220
Query: 239 gctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggc 298
||||||||||| |||||||||||| | ||||||| || |||||||| || ||||||||
Sbjct: 221 gctgagtacaaaaggtccaggttgtctaggaaccgcagaactgtgaaccgcccatatggt 280
Query: 299 ggtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaa 358
|| || || ||||| ||||||||||| || ||||||||||| || || ||||||| ||
Sbjct: 281 ggagtgctctctggaactgcagttagagaaaggatcatccgtgctttcctggttgaagag 340
Query: 359 cagaagatagtgaagaaggtgttgaa 384
|||||||| || ||||||||||||||
Sbjct: 341 cagaagattgtcaagaaggtgttgaa 366
>gb|AW745189.1|AW745189 LG1_387_B08.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 580
Score = 258 bits (130), Expect = 6e-067
Identities = 277/326 (84%)
Strand = Plus / Plus
Query: 59 aagatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccag 118
|||||||||||||| || |||||||| |||||||||||||| ||||| || || ||||||
Sbjct: 66 aagatggtgcagcgtctgacctaccgcaagcggcacagctatgccacaaagtccaaccag 125
Query: 119 acccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcg 178
|| || ||||||||||| |||||||| || || ||||||||||||||||||||| | ||
Sbjct: 126 acgcgggtcgtcaagacccctggtggtaagctcgtgtaccagtacaccaagaagagagcc 185
Query: 179 agcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacct 238
||||| || |||||||| || ||||||||||||||||| || ||||| || || || |||
Sbjct: 186 agcgggcccaagtgccccgtgaccgggaagaagatccaggggattccccatcttaggcct 245
Query: 239 gctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggc 298
||||||||||| |||||||||||| | ||||||| || |||||||| || ||||||||
Sbjct: 246 gctgagtacaaaaggtccaggttgtctaggaaccgcagaactgtgaaccgcccatatggt 305
Query: 299 ggtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaa 358
|| || || ||||| ||||||||||| || ||||||||||| || || ||||||| ||
Sbjct: 306 ggagtgctctctggaactgcagttagagaaaggatcatccgtgctttcctggttgaagag 365
Query: 359 cagaagatagtgaagaaggtgttgaa 384
|||||||| || ||||||||||||||
Sbjct: 366 cagaagattgtcaagaaggtgttgaa 391
>gb|BG047671.1|BG047671 OV1_25_B10.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 631
Score = 258 bits (130), Expect = 6e-067
Identities = 277/326 (84%)
Strand = Plus / Plus
Query: 59 aagatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccag 118
|||||||||||||| || |||||||| |||||||||||||| ||||| || || ||||||
Sbjct: 64 aagatggtgcagcgtctgacctaccgcaagcggcacagctatgccacaaagtccaaccag 123
Query: 119 acccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcg 178
|| || ||||||||||| |||||||| || || ||||||||||||||||||||| | ||
Sbjct: 124 acgcgggtcgtcaagacccctggtggtaagctcgtgtaccagtacaccaagaagagagcc 183
Query: 179 agcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacct 238
||||| || |||||||| || ||||||||||||||||| || ||||| || || || |||
Sbjct: 184 agcgggcccaagtgccccgtgaccgggaagaagatccaggggattccccatcttaggcct 243
Query: 239 gctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggc 298
||||||||||| |||||||||||| | ||||||| || |||||||| || ||||||||
Sbjct: 244 gctgagtacaaaaggtccaggttgtctaggaaccgcagaactgtgaaccgcccatatggt 303
Query: 299 ggtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaa 358
|| || || ||||| ||||||||||| || ||||||||||| || || ||||||| ||
Sbjct: 304 ggagtgctctctggaactgcagttagagaaaggatcatccgtgctttcctggttgaagag 363
Query: 359 cagaagatagtgaagaaggtgttgaa 384
|||||||| || ||||||||||||||
Sbjct: 364 cagaagattgtcaagaaggtgttgaa 389
>gb|BG047672.1|BG047672 OV1_25_B11.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 618
Score = 258 bits (130), Expect = 6e-067
Identities = 277/326 (84%)
Strand = Plus / Plus
Query: 59 aagatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccag 118
|||||||||||||| || |||||||| |||||||||||||| ||||| || || ||||||
Sbjct: 64 aagatggtgcagcgtctgacctaccgcaagcggcacagctatgccacaaagtccaaccag 123
Query: 119 acccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcg 178
|| || ||||||||||| |||||||| || || ||||||||||||||||||||| | ||
Sbjct: 124 acgcgggtcgtcaagacccctggtggtaagctcgtgtaccagtacaccaagaagagagcc 183
Query: 179 agcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacct 238
||||| || |||||||| || ||||||||||||||||| || ||||| || || || |||
Sbjct: 184 agcgggcccaagtgccccgtgaccgggaagaagatccaggggattccccatcttaggcct 243
Query: 239 gctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggc 298
||||||||||| |||||||||||| | ||||||| || |||||||| || ||||||||
Sbjct: 244 gctgagtacaaaaggtccaggttgtctaggaaccgcagaactgtgaaccgcccatatggt 303
Query: 299 ggtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaa 358
|| || || ||||| ||||||||||| || ||||||||||| || || ||||||| ||
Sbjct: 304 ggagtgctctctggaactgcagttagagaaaggatcatccgtgctttcctggttgaagag 363
Query: 359 cagaagatagtgaagaaggtgttgaa 384
|||||||| || ||||||||||||||
Sbjct: 364 cagaagattgtcaagaaggtgttgaa 389
>gb|BG047625.1|BG047625 OV1_26_B10.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 581
Score = 258 bits (130), Expect = 6e-067
Identities = 277/326 (84%)
Strand = Plus / Plus
Query: 59 aagatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccag 118
|||||||||||||| || |||||||| |||||||||||||| ||||| || || ||||||
Sbjct: 64 aagatggtgcagcgtctgacctaccgcaagcggcacagctatgccacaaagtccaaccag 123
Query: 119 acccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcg 178
|| || ||||||||||| |||||||| || || ||||||||||||||||||||| | ||
Sbjct: 124 acgcgggtcgtcaagacccctggtggtaagctcgtgtaccagtacaccaagaagagagcc 183
Query: 179 agcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacct 238
||||| || |||||||| || ||||||||||||||||| || ||||| || || || |||
Sbjct: 184 agcgggcccaagtgccccgtgaccgggaagaagatccaggggattccccatcttaggcct 243
Query: 239 gctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggc 298
||||||||||| |||||||||||| | ||||||| || |||||||| || ||||||||
Sbjct: 244 gctgagtacaaaaggtccaggttgtctaggaaccgcagaactgtgaaccgcccatatggt 303
Query: 299 ggtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaa 358
|| || || ||||| ||||||||||| || ||||||||||| || || ||||||| ||
Sbjct: 304 ggagtgctctctggaactgcagttagagaaaggatcatccgtgctttcctggttgaagag 363
Query: 359 cagaagatagtgaagaaggtgttgaa 384
|||||||| || ||||||||||||||
Sbjct: 364 cagaagattgtcaagaaggtgttgaa 389
>gb|BG241242.1|BG241242 OV1_39_H08.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 571
Score = 258 bits (130), Expect = 6e-067
Identities = 277/326 (84%)
Strand = Plus / Plus
Query: 59 aagatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccag 118
|||||||||||||| || |||||||| |||||||||||||| ||||| || || ||||||
Sbjct: 62 aagatggtgcagcgtctgacctaccgcaagcggcacagctatgccacaaagtccaaccag 121
Query: 119 acccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcg 178
|| || ||||||||||| |||||||| || || ||||||||||||||||||||| | ||
Sbjct: 122 acgcgggtcgtcaagacccctggtggtaagctcgtgtaccagtacaccaagaagagagcc 181
Query: 179 agcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacct 238
||||| || |||||||| || ||||||||||||||||| || ||||| || || || |||
Sbjct: 182 agcgggcccaagtgccccgtgaccgggaagaagatccaggggattccccatcttaggcct 241
Query: 239 gctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggc 298
||||||||||| |||||||||||| | ||||||| || |||||||| || ||||||||
Sbjct: 242 gctgagtacaaaaggtccaggttgtctaggaaccgcagaactgtgaaccgcccatatggt 301
Query: 299 ggtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaa 358
|| || || ||||| ||||||||||| || ||||||||||| || || ||||||| ||
Sbjct: 302 ggagtgctctctggaactgcagttagagaaaggatcatccgtgctttcctggttgaagag 361
Query: 359 cagaagatagtgaagaaggtgttgaa 384
|||||||| || ||||||||||||||
Sbjct: 362 cagaagattgtcaagaaggtgttgaa 387
>gb|CD431590.1|CD431590 ETH1_9_E04.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_9_E04_A002 5', mRNA sequence
Length = 589
Score = 258 bits (130), Expect = 6e-067
Identities = 277/326 (84%)
Strand = Plus / Plus
Query: 59 aagatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccag 118
|||||||||||||| || |||||||| |||||||||||||| ||||| || || ||||||
Sbjct: 72 aagatggtgcagcgtctgacctaccgcaagcggcacagctatgccacaaagtccaaccag 131
Query: 119 acccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcg 178
|| || ||||||||||| |||||||| || || ||||||||||||||||||||| | ||
Sbjct: 132 acgcgggtcgtcaagacccctggtggtaagctcgtgtaccagtacaccaagaagagagcc 191
Query: 179 agcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacct 238
||||| || |||||||| || ||||||||||||||||| || ||||| || || || |||
Sbjct: 192 agcgggcccaagtgccccgtgaccgggaagaagatccaggggattccccatcttaggcct 251
Query: 239 gctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggc 298
||||||||||| |||||||||||| | ||||||| || |||||||| || ||||||||
Sbjct: 252 gctgagtacaaaaggtccaggttgtctaggaaccgcagaactgtgaaccgcccatatggt 311
Query: 299 ggtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaa 358
|| || || ||||| ||||||||||| || ||||||||||| || || ||||||| ||
Sbjct: 312 ggggtgctctctggaactgcagttagagaaaggatcatccgtgctttcctggttgaagag 371
Query: 359 cagaagatagtgaagaaggtgttgaa 384
|||||||| || ||||||||||||||
Sbjct: 372 cagaagattgtcaagaaggtgttgaa 397
>gb|CX610191.1|CX610191 ANR1_17_E02.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_17_E02_A002 3', mRNA sequence
Length = 629
Score = 250 bits (126), Expect = 1e-064
Identities = 276/326 (84%)
Strand = Plus / Plus
Query: 59 aagatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccag 118
|||||||||||||| || |||||||| |||||||||||||| ||||| || || ||||||
Sbjct: 72 aagatggtgcagcgtctgacctaccgcaagcggcacagctatgccacaaagtccaaccag 131
Query: 119 acccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcg 178
|| || ||||||||||| |||||||| || || ||||||||||||||||||||| | ||
Sbjct: 132 acgcgggtcgtcaagacccctggtggtaagctcgtgtaccagtacaccaagaagagagcc 191
Query: 179 agcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacct 238
||||| || |||||||| || ||||||||||||| ||| || ||||| || || || |||
Sbjct: 192 agcgggcccaagtgccccgtgaccgggaagaagacccaggggattccccatcttaggcct 251
Query: 239 gctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggc 298
||||||||||| |||||||||||| | ||||||| || |||||||| || ||||||||
Sbjct: 252 gctgagtacaaaaggtccaggttgtctaggaaccgcagaactgtgaaccgcccatatggt 311
Query: 299 ggtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaa 358
|| || || ||||| ||||||||||| || ||||||||||| || || ||||||| ||
Sbjct: 312 ggagtgctctctggaactgcagttagagaaaggatcatccgtgctttcctggttgaagag 371
Query: 359 cagaagatagtgaagaaggtgttgaa 384
|||||||| || ||||||||||||||
Sbjct: 372 cagaagattgtcaagaaggtgttgaa 397
>gb|CX610277.1|CX610277 ANR1_17_E02.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_17_E02_A002 5', mRNA sequence
Length = 600
Score = 250 bits (126), Expect = 1e-064
Identities = 276/326 (84%)
Strand = Plus / Plus
Query: 59 aagatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccag 118
|||||||||||||| || |||||||| |||||||||||||| ||||| || || ||||||
Sbjct: 24 aagatggtgcagcgtctgacctaccgcaagcggcacagctatgccacaaagtccaaccag 83
Query: 119 acccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcg 178
|| || ||||||||||| |||||||| || || ||||||||||||||||||||| | ||
Sbjct: 84 acgcgggtcgtcaagacccctggtggtaagctcgtgtaccagtacaccaagaagagagcc 143
Query: 179 agcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacct 238
||||| || |||||||| || ||||||||||||| ||| || ||||| || || || |||
Sbjct: 144 agcgggcccaagtgccccgtgaccgggaagaagacccaggggattccccatcttaggcct 203
Query: 239 gctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggc 298
||||||||||| |||||||||||| | ||||||| || |||||||| || ||||||||
Sbjct: 204 gctgagtacaaaaggtccaggttgtctaggaaccgcagaactgtgaaccgcccatatggt 263
Query: 299 ggtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaa 358
|| || || ||||| ||||||||||| || ||||||||||| || || ||||||| ||
Sbjct: 264 ggagtgctctctggaactgcagttagagaaaggatcatccgtgctttcctggttgaagag 323
Query: 359 cagaagatagtgaagaaggtgttgaa 384
|||||||| || ||||||||||||||
Sbjct: 324 cagaagattgtcaagaaggtgttgaa 349
>gb|CX607974.1|CX607974 ANR1_31_H04.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_31_H04_A002 5', mRNA sequence
Length = 546
Score = 242 bits (122), Expect = 3e-062
Identities = 275/326 (84%)
Strand = Plus / Plus
Query: 59 aagatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccag 118
|||||||||||||| || |||||||| |||||||||||||| ||||| || || ||||||
Sbjct: 37 aagatggtgcagcgtctgacctaccgcaagcggcacagctatgccacaaagtccaaccag 96
Query: 119 acccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcg 178
|| || ||||||||||| |||||||| || || ||||||||||||||||||||| | ||
Sbjct: 97 acgcgggtcgtcaagacccctggtggtaagctcgtgtaccagtacaccaagaagagagcc 156
Query: 179 agcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacct 238
||||| || |||||||| || ||||||||||||||||| || ||||| || || | |||
Sbjct: 157 agcgggcccaagtgccccgtgaccgggaagaagatccaggggattccccatcttaagcct 216
Query: 239 gctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggc 298
||||||||||| |||||||||||| | ||||||| | |||||||| || ||||||||
Sbjct: 217 gctgagtacaaaaggtccaggttgtctaggaaccgcacaactgtgaaccgcccatatggt 276
Query: 299 ggtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaa 358
|| || || ||||| ||||||||||| || ||||||||||| || || ||||||| ||
Sbjct: 277 ggagtgctctctggaactgcagttagagaaaggatcatccgtgctttcctggttgaagag 336
Query: 359 cagaagatagtgaagaaggtgttgaa 384
|||||||| || ||||||||||||||
Sbjct: 337 cagaagattgtcaagaaggtgttgaa 362
>gb|BE125936.1|BE125936 DG1_59_H04.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 343
Score = 232 bits (117), Expect = 3e-059
Identities = 240/281 (85%)
Strand = Plus / Plus
Query: 59 aagatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccag 118
|||||||||||||| || |||||||| |||||||||||||| ||||| || || ||||||
Sbjct: 42 aagatggtgcagcgtctgacctaccgcaagcggcacagctatgccacaaagtccaaccag 101
Query: 119 acccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcg 178
|| || ||||||||||| |||||||| || || ||||||||||||||||||||| | ||
Sbjct: 102 acgcgggtcgtcaagacccctggtggtaagctcgtgtaccagtacaccaagaagagagcc 161
Query: 179 agcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacct 238
||||| || |||||||| || ||||||||||||||||| || ||||| || || || |||
Sbjct: 162 agcgggcccaagtgccccgtgaccgggaagaagatccaggggattccccatcttaggcct 221
Query: 239 gctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggc 298
||||||||||| |||||||||||| | ||||||| || |||||||| || ||||||||
Sbjct: 222 gctgagtacaaaaggtccaggttgtctaggaaccgcagaactgtgaaccgcccatatggt 281
Query: 299 ggtgttctgtctggtactgcagttagggagaggatcatccg 339
|| || || ||||| ||||||||||| || |||||||||||
Sbjct: 282 ggagtgctctctggaactgcagttagagaaaggatcatccg 322
>gb|CF073951.1|CF073951 FE1_9_D04.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_9_D04_A002 3', mRNA sequence
Length = 568
Score = 228 bits (115), Expect = 5e-058
Identities = 253/299 (84%)
Strand = Plus / Plus
Query: 86 aagcggcacagctacgccaccaaatcgaaccagacccgcgtcgtcaagacacctggtggg 145
|||||||||||||| ||||| || || |||||||| || ||||||||||| ||||||||
Sbjct: 4 aagcggcacagctatgccacaaagtccaaccagacgcgggtcgtcaagacccctggtggt 63
Query: 146 aaacttgtgtaccagtacaccaagaagcgcgcgagcggaccgaagtgcccagtcaccggg 205
|| || ||||||||||||||||||||| | || ||||| || |||||||| || ||||||
Sbjct: 64 aagctcgtgtaccagtacaccaagaagagagccagcgggcccaagtgccccgtgaccggg 123
Query: 206 aagaagatccaaggaattccacacctgagacctgctgagtacaagaggtccaggttggca 265
||||||||||| || ||||| || || || |||||||||||||| |||||||||||| |
Sbjct: 124 aagaagatccaggggattccccatcttaggcctgctgagtacaaaaggtccaggttgtct 183
Query: 266 aggaaccaaaggactgtgaatcgtccatatggcggtgttctgtctggtactgcagttagg 325
||||||| || |||||||| || |||||||| || || || ||||| |||||||||||
Sbjct: 184 aggaaccgcagaactgtgaaccgcccatatggtggagtgctctctggaactgcagttaga 243
Query: 326 gagaggatcatccgcgcctttttggttgaggaacagaagatagtgaagaaggtgttgaa 384
|| ||||||||||| || || ||||||| || |||||||| || ||||||||||||||
Sbjct: 244 gaaaggatcatccgtgctttcctggttgaagagcagaagattgtcaagaaggtgttgaa 302
>gb|BE357221.1|BE357221 DG1_147_B08.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 597
Score = 222 bits (112), Expect = 3e-056
Identities = 250/296 (84%)
Strand = Plus / Plus
Query: 89 cggcacagctacgccaccaaatcgaaccagacccgcgtcgtcaagacacctggtgggaaa 148
||||||||||| ||||| || || |||||||| || ||||||||||| |||||||| ||
Sbjct: 15 cggcacagctatgccacaaagtccaaccagacgcgggtcgtcaagacccctggtggtaag 74
Query: 149 cttgtgtaccagtacaccaagaagcgcgcgagcggaccgaagtgcccagtcaccgggaag 208
|| ||||||||||||||||||||| | || ||||| || |||||||| || |||||||||
Sbjct: 75 ctcgtgtaccagtacaccaagaagagagccagcgggcccaagtgccccgtgaccgggaag 134
Query: 209 aagatccaaggaattccacacctgagacctgctgagtacaagaggtccaggttggcaagg 268
|||||||| || ||||| || || || |||||||||||||| |||||||||||| | |||
Sbjct: 135 aagatccaggggattccccatcttaggcctgctgagtacaaaaggtccaggttgtctagg 194
Query: 269 aaccaaaggactgtgaatcgtccatatggcggtgttctgtctggtactgcagttagggag 328
|||| || |||||||| || |||||||| || || || ||||| ||||||||||| ||
Sbjct: 195 aaccgcagaactgtgaaccgcccatatggtggagtgctctctggaactgcagttagagaa 254
Query: 329 aggatcatccgcgcctttttggttgaggaacagaagatagtgaagaaggtgttgaa 384
||||||||||| || || ||||||| || |||||||| || ||||||||||||||
Sbjct: 255 aggatcatccgtgctttcctggttgaagagcagaagattgtcaagaaggtgttgaa 310
>gb|CF760792.1|CF760792 DSAF1_66_G02.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_66_G02_A011 5', mRNA sequence
Length = 404
Score = 202 bits (102), Expect = 3e-050
Identities = 198/230 (86%)
Strand = Plus / Plus
Query: 149 cttgtgtaccagtacaccaagaagcgcgcgagcggaccgaagtgcccagtcaccgggaag 208
||||||||||||||||| |||||| | |||||||| || |||||||| ||||||||||||
Sbjct: 5 cttgtgtaccagtacacgaagaagagggcgagcgggcccaagtgccccgtcaccgggaag 64
Query: 209 aagatccaaggaattccacacctgagacctgctgagtacaagaggtccaggttggcaagg 268
|||||||| || || || ||| | || |||||||||||||| |||||||||||| | |||
Sbjct: 65 aagatccaggggatcccccacttaaggcctgctgagtacaaaaggtccaggttgtctagg 124
Query: 269 aaccaaaggactgtgaatcgtccatatggcggtgttctgtctggtactgcagttagggag 328
|||| ||||||||||| ||||||||||| || || || ||||| | ||| |||||||||
Sbjct: 125 aaccgcaggactgtgaaccgtccatatggtggagtactctctggaattgctgttagggag 184
Query: 329 aggatcatccgcgcctttttggttgaggaacagaagatagtgaagaaggt 378
|| |||||||| || || |||||||||||||||||||| || ||||||||
Sbjct: 185 agaatcatccgtgctttcttggttgaggaacagaagattgtcaagaaggt 234
>gb|CF761895.1|CF761895 DSAF1_83_B05.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_83_B05_A011 5', mRNA sequence
Length = 540
Score = 202 bits (102), Expect = 3e-050
Identities = 198/230 (86%)
Strand = Plus / Plus
Query: 149 cttgtgtaccagtacaccaagaagcgcgcgagcggaccgaagtgcccagtcaccgggaag 208
||||||||||||||||| |||||| | |||||||| || |||||||| ||||||||||||
Sbjct: 5 cttgtgtaccagtacacgaagaagagggcgagcgggcccaagtgccccgtcaccgggaag 64
Query: 209 aagatccaaggaattccacacctgagacctgctgagtacaagaggtccaggttggcaagg 268
|||||||| || || || ||| | || |||||||||||||| |||||||||||| | |||
Sbjct: 65 aagatccaggggatcccccacttaaggcctgctgagtacaaaaggtccaggttgtctagg 124
Query: 269 aaccaaaggactgtgaatcgtccatatggcggtgttctgtctggtactgcagttagggag 328
|||| ||||||||||| ||||||||||| || || || ||||| | ||| |||||||||
Sbjct: 125 aaccgcaggactgtgaaccgtccatatggtggagtactctctggaattgctgttagggag 184
Query: 329 aggatcatccgcgcctttttggttgaggaacagaagatagtgaagaaggt 378
|| |||||||| || || |||||||||||||||||||| || ||||||||
Sbjct: 185 agaatcatccgtgctttcttggttgaggaacagaagattgtcaagaaggt 234
>gb|AW745256.1|AW745256 LG1_387_B08.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 549
Score = 190 bits (96), Expect = 1e-046
Identities = 228/272 (83%)
Strand = Plus / Plus
Query: 113 aaccagacccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaag 172
|||||||| || ||||||||||| |||||||| || || |||||||||||||||||||||
Sbjct: 11 aaccagacgcgggtcgtcaagacccctggtggtaagctcgtgtaccagtacaccaagaag 70
Query: 173 cgcgcgagcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctg 232
| || ||||| || |||||||| || ||||||||||||||||| || ||||| || |
Sbjct: 71 agagccagcgggcccaagtgccccgtgaccgggaagaagatccaggggattccccatttt 130
Query: 233 agacctgctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtcca 292
|| |||||||||||||| |||||||||||| ||||||| || |||||||| || |||
Sbjct: 131 aggcctgctgagtacaaaaggtccaggttgtttaggaaccgcagaactgtgaaccgccca 190
Query: 293 tatggcggtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggtt 352
||||| || || || ||||| ||||||||||| || ||||||||||| || || |||||
Sbjct: 191 tatggtggagtgctttctggaactgcagttagagaaaggatcatccgtgctttcctggtt 250
Query: 353 gaggaacagaagatagtgaagaaggtgttgaa 384
|| || |||||||| || ||||||||||||||
Sbjct: 251 gaagagcagaagattgtcaagaaggtgttgaa 282
>gb|CX607888.1|CX607888 ANR1_31_H04.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_31_H04_A002 3', mRNA sequence
Length = 587
Score = 190 bits (96), Expect = 1e-046
Identities = 216/256 (84%)
Strand = Plus / Plus
Query: 129 tcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcgagcggaccga 188
||||||| |||||||| || || ||||||||||||||||||||| | || ||||| || |
Sbjct: 1 tcaagacccctggtggtaagctcgtgtaccagtacaccaagaagagagccagcgggccca 60
Query: 189 agtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctgctgagtaca 248
||||||| || ||||||||||||||||| || ||||| || || || |||||||||||||
Sbjct: 61 agtgccccgtgaccgggaagaagatccaggggattccccatcttaggcctgctgagtaca 120
Query: 249 agaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcggtgttctgt 308
| |||||||||||| | ||||||| || |||||||| || |||||||| || || || |
Sbjct: 121 aaaggtccaggttgtctaggaaccgcagaactgtgaaccgcccatatggtggagtgctct 180
Query: 309 ctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaacagaagatag 368
|||| ||||||||||| || ||||||||||| || || ||||||| || |||||||| |
Sbjct: 181 ctggaactgcagttagagaaaggatcatccgtgctttcctggttgaagagcagaagattg 240
Query: 369 tgaagaaggtgttgaa 384
| ||||||||||||||
Sbjct: 241 tcaagaaggtgttgaa 256
>gb|BE593995.1|BE593995 WS1_104_H08.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 588
Score = 149 bits (75), Expect = 4e-034
Identities = 183/219 (83%)
Strand = Plus / Plus
Query: 166 caagaagcgcgcgagcggaccgaagtgcccagtcaccgggaagaagatccaaggaattcc 225
||||||| | || ||||| || |||||||| || ||||||||||||||||| || |||||
Sbjct: 121 caagaagagagccagcgggcccaagtgccccgtgaccgggaagaagatccaggggattcc 180
Query: 226 acacctgagacctgctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaa 285
|| || || |||||||||||||| |||||||||||| | ||||||| || ||||||||
Sbjct: 181 ccatcttaggcctgctgagtacaaaaggtccaggttgtctaggaaccgcagaactgtgaa 240
Query: 286 tcgtccatatggcggtgttctgtctggtactgcagttagggagaggatcatccgcgcctt 345
|| |||||||| || || || ||||| ||||||||||| || ||||||||||| || ||
Sbjct: 241 ccgcccatatggtggagtgctctctggaactgcagttagagaaaggatcatccgtgcttt 300
Query: 346 tttggttgaggaacagaagatagtgaagaaggtgttgaa 384
||||||| || |||||||| || ||||||||||||||
Sbjct: 301 cctggttgaagagcagaagattgtcaagaaggtgttgaa 339
>gb|AI723943.1|AI723943 RHIZ1_36_A12.y1_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 473
Score = 143 bits (72), Expect = 2e-032
Identities = 156/184 (84%)
Strand = Plus / Plus
Query: 201 ccgggaagaagatccaaggaattccacacctgagacctgctgagtacaagaggtccaggt 260
|||||||||||||||| || ||||| || || || |||||||||||||| ||||||||||
Sbjct: 8 ccgggaagaagatccaggggattccccatcttaggcctgctgagtacaaaaggtccaggt 67
Query: 261 tggcaaggaaccaaaggactgtgaatcgtccatatggcggtgttctgtctggtactgcag 320
|| | ||||||| || |||||||| ||||||||||| || || || ||||| |||||||
Sbjct: 68 tgtctaggaaccgcagaactgtgaaccgtccatatggtggagtgctctctggaactgcag 127
Query: 321 ttagggagaggatcatccgcgcctttttggttgaggaacagaagatagtgaagaaggtgt 380
|||| || ||||||||||| || || ||||||| || |||||||| || ||||||||||
Sbjct: 128 ttagagaaaggatcatccgtgctttcctggttgaagagcagaagattgtcaagaaggtgt 187
Query: 381 tgaa 384
||||
Sbjct: 188 tgaa 191
>gb|BZ627714.1|BZ627714 ih54e06.g1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ih54e06 5', DNA sequence
Length = 376
Score = 135 bits (68), Expect = 6e-030
Identities = 110/124 (88%)
Strand = Plus / Plus
Query: 6 gagaggaagagcgcgcggagagtgagagcccgggagaagcagcggctgggggtaagatgg 65
|||||||| ||||||||||||| ||| |||||||||||| | ||| || || |||||||
Sbjct: 238 gagaggaatagcgcgcggagagccagaccccgggagaagcggtggccggcggcaagatgg 297
Query: 66 tgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccagacccgcg 125
||| ||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||
Sbjct: 298 cgcatcggctcacctaccggaaccggcatagctacgccaccaaatccaaccagacccgcg 357
Query: 126 tcgt 129
||||
Sbjct: 358 tcgt 361
>gb|CW196828.1|CW196828 104_621_11181370_148_36819_047 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11181370, DNA
sequence
Length = 724
Score = 135 bits (68), Expect = 6e-030
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 149 cttgtgtaccagtacaccaagaagcgcgcgagcggaccgaagtgcccagtcaccgggaag 208
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 47 cttgtgtaccagtacaccaagaagcgcgcgagcggaccgaagtgccccgtcaccgggaag 106
Query: 209 aagatccaagga 220
||||||||||||
Sbjct: 107 aagatccaagga 118
>gb|CW385171.1|CW385171 fsbb001f068i20f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f068i20, DNA
sequence
Length = 792
Score = 135 bits (68), Expect = 6e-030
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 149 cttgtgtaccagtacaccaagaagcgcgcgagcggaccgaagtgcccagtcaccgggaag 208
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 47 cttgtgtaccagtacaccaagaagcgcgcgagcggaccgaagtgccccgtcaccgggaag 106
Query: 209 aagatccaagga 220
||||||||||||
Sbjct: 107 aagatccaagga 118
>gb|CL177611.1|CL177611 104_385_10893953_116_31914_017 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10893953, DNA
sequence
Length = 321
Score = 133 bits (67), Expect = 2e-029
Identities = 70/71 (98%)
Strand = Plus / Minus
Query: 150 ttgtgtaccagtacaccaagaagcgcgcgagcggaccgaagtgcccagtcaccgggaaga 209
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 284 ttgtgtaccagtacaccaagaagcgcgcgagcggaccgaagtgccccgtcaccgggaaga 225
Query: 210 agatccaagga 220
|||||||||||
Sbjct: 224 agatccaagga 214
>gb|AI724087.1|AI724087 RHIZ1_5_B10.y2_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 476
Score = 121 bits (61), Expect = 8e-026
Identities = 152/183 (83%)
Strand = Plus / Plus
Query: 202 cgggaagaagatccaaggaattccacacctgagacctgctgagtacaagaggtccaggtt 261
||||||||||||||| || ||||| || || || |||||||||||||| |||||||||||
Sbjct: 1 cgggaagaagatccaggggattccccatcttaggcctgctgagtacaaaaggtccaggtt 60
Query: 262 ggcaaggaaccaaaggactgtgaatcgtccatatggcggtgttctgtctggtactgcagt 321
| | ||||||| || |||||||| || |||||||| | || || |||| ||||||||
Sbjct: 61 gtctaggaaccgcagaactgtgaaccgcccatatggtgnagtgctctctgnaactgcagt 120
Query: 322 tagggagaggatcatccgcgcctttttggttgaggaacagaagatagtgaagaaggtgtt 381
||| || ||||||||||| || || ||||||| || |||||||| || |||||||||||
Sbjct: 121 tagagaaaggatcatccgtgctttcctggttgaagagcagaagattgtcaagaaggtgtt 180
Query: 382 gaa 384
|||
Sbjct: 181 gaa 183
>gb|CL158096.1|CL158096 104_346_10803303_116_31376_279 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10803303, DNA
sequence
Length = 618
Score = 109 bits (55), Expect = 3e-022
Identities = 76/83 (91%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||| ||||||||||||||||| ||||||||||| ||||| || |||||||
Sbjct: 429 agatggtgcagcgcctcacctaccggaagcgtcacagctacgcgaccaagtccaaccaga 488
Query: 120 cccgcgtcgtcaagacacctggt 142
|||| ||||||||||| ||||||
Sbjct: 489 cccgggtcgtcaagacccctggt 511
>gb|CW092969.1|CW092969 104_455_10999487_114_33047_084 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10999487, DNA
sequence
Length = 695
Score = 109 bits (55), Expect = 3e-022
Identities = 76/83 (91%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||| ||||||||||||||||| ||||||||||| ||||| || |||||||
Sbjct: 26 agatggtgcagcgcctcacctaccggaagcgtcacagctacgcgaccaagtccaaccaga 85
Query: 120 cccgcgtcgtcaagacacctggt 142
|||| ||||||||||| ||||||
Sbjct: 86 cccgggtcgtcaagacccctggt 108
Score = 97.6 bits (49), Expect = 1e-018
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 140 ggtgggaaacttgtgtaccagtacaccaagaagcgcgcgagcggaccgaagtgcccagtc 199
|||||||| ||||||||||||||||| |||||| | |||||||| || |||||||| |||
Sbjct: 217 ggtgggaagcttgtgtaccagtacacgaagaagagggcgagcgggcccaagtgccccgtc 276
Query: 200 accgggaagaagatcca 216
|||||||||||||||||
Sbjct: 277 accgggaagaagatcca 293
>gb|CW235145.1|CW235145 104_690_11214826_148_37412_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11214826, DNA
sequence
Length = 702
Score = 109 bits (55), Expect = 3e-022
Identities = 76/83 (91%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||| ||||||||||||||||| ||||||||||| ||||| || |||||||
Sbjct: 368 agatggtgcagcgcctcacctaccggaagcgtcacagctacgcgaccaagtccaaccaga 427
Query: 120 cccgcgtcgtcaagacacctggt 142
|||| ||||||||||| ||||||
Sbjct: 428 cccgggtcgtcaagacccctggt 450
Score = 97.6 bits (49), Expect = 1e-018
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 140 ggtgggaaacttgtgtaccagtacaccaagaagcgcgcgagcggaccgaagtgcccagtc 199
|||||||| ||||||||||||||||| |||||| | |||||||| || |||||||| |||
Sbjct: 559 ggtgggaagcttgtgtaccagtacacgaagaagagggcgagcgggcccaagtgccccgtc 618
Query: 200 accgggaagaagatcca 216
|||||||||||||||||
Sbjct: 619 accgggaagaagatcca 635
>gb|CF761712.1|CF761712 DSAF1_80_A02.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_80_A02_A011 3', mRNA sequence
Length = 421
Score = 107 bits (54), Expect = 1e-021
Identities = 123/146 (84%)
Strand = Plus / Plus
Query: 239 gctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggc 298
||||||||||| |||||||||||| | ||||||| || |||||||| || ||||||||
Sbjct: 1 gctgagtacaaaaggtccaggttgtctaggaaccgcagaactgtgaaccgcccatatggt 60
Query: 299 ggtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaa 358
|| || || ||||| ||||||||||| || ||||||||||| || || ||||||| ||
Sbjct: 61 ggagtgctctctggaactgcagttagagaaaggatcatccgtgctttcctggttgaagag 120
Query: 359 cagaagatagtgaagaaggtgttgaa 384
|||||||| || ||||||||||||||
Sbjct: 121 cagaagattgtcaagaaggtgttgaa 146
>gb|CW235144.1|CW235144 104_690_11214826_116_37408_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11214826, DNA
sequence
Length = 601
Score = 97.6 bits (49), Expect = 1e-018
Identities = 70/77 (90%)
Strand = Plus / Minus
Query: 140 ggtgggaaacttgtgtaccagtacaccaagaagcgcgcgagcggaccgaagtgcccagtc 199
|||||||| ||||||||||||||||| |||||| | |||||||| || |||||||| |||
Sbjct: 190 ggtgggaagcttgtgtaccagtacacgaagaagagggcgagcgggcccaagtgccccgtc 131
Query: 200 accgggaagaagatcca 216
|||||||||||||||||
Sbjct: 130 accgggaagaagatcca 114
Score = 93.7 bits (47), Expect = 2e-017
Identities = 74/83 (89%)
Strand = Plus / Minus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
||||||||||||| ||| ||||||||||||| ||||| ||||| ||||| || |||||||
Sbjct: 381 agatggtgcagcgcctctcctaccggaagcgtcacagatacgcgaccaagtccaaccaga 322
Query: 120 cccgcgtcgtcaagacacctggt 142
|||| ||||||||||| ||||||
Sbjct: 321 cccgggtcgtcaagacccctggt 299
>gb|CW462610.1|CW462610 fsbb001f210n11k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f210n11, DNA
sequence
Length = 659
Score = 97.6 bits (49), Expect = 1e-018
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 140 ggtgggaaacttgtgtaccagtacaccaagaagcgcgcgagcggaccgaagtgcccagtc 199
|||||||| ||||||||||||||||| |||||| | |||||||| || |||||||| |||
Sbjct: 53 ggtgggaagcttgtgtaccagtacacgaagaagagggcgagcgggcccaagtgccccgtc 112
Query: 200 accgggaagaagatcca 216
|||||||||||||||||
Sbjct: 113 accgggaagaagatcca 129
>gb|CL158095.1|CL158095 104_346_10803303_114_31375_279 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10803303, DNA
sequence
Length = 677
Score = 87.7 bits (44), Expect = 1e-015
Identities = 75/84 (89%), Gaps = 1/84 (1%)
Strand = Plus / Minus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctac-gccaccaaatcgaaccag 118
||||||||||||| ||||||||||||||||| ||||| ||| || ||||| || ||||||
Sbjct: 474 agatggtgcagcgcctcacctaccggaagcgtcacagatactgcgaccaagtccaaccag 415
Query: 119 acccgcgtcgtcaagacacctggt 142
||||| ||||||||||| ||||||
Sbjct: 414 acccgggtcgtcaagacccctggt 391
Score = 83.8 bits (42), Expect = 2e-014
Identities = 70/78 (89%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 140 ggtgggaaacttgtgtaccagtac-accaagaagcgcgcgagcggaccgaagtgcccagt 198
|||||||| ||||||||||||||| || |||||| | |||||||| || |||||||| ||
Sbjct: 282 ggtgggaagcttgtgtaccagtactacgaagaagagggcgagcgggcccaagtgccccgt 223
Query: 199 caccgggaagaagatcca 216
||||||||||||||||||
Sbjct: 222 caccgggaagaagatcca 205
>gb|CW054019.1|CW054019 104_294_10516295_114_30182 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10516295, DNA
sequence
Length = 557
Score = 87.7 bits (44), Expect = 1e-015
Identities = 83/96 (86%)
Strand = Plus / Minus
Query: 236 cctgctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatat 295
|||||||||||||| |||||||||||| | ||||||| ||||||||||| |||||||||
Sbjct: 131 cctgctgagtacaaaaggtccaggttgtctaggaaccgcaggactgtgaaccgtccatat 72
Query: 296 ggcggtgttctgtctggtactgcagttagggagagg 331
|| || || || ||||| | ||| ||||||||||||
Sbjct: 71 ggtggagtactctctggaattgctgttagggagagg 36
>gb|CW329758.1|CW329758 104_826_11480014_116_35998_089 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480014, DNA
sequence
Length = 718
Score = 87.7 bits (44), Expect = 1e-015
Identities = 74/84 (88%)
Strand = Plus / Plus
Query: 59 aagatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccag 118
|||||||||||||| || |||||||| |||||||||||||| ||||| || || ||||||
Sbjct: 360 aagatggtgcagcgtctgacctaccgcaagcggcacagctatgccacaaagtccaaccag 419
Query: 119 acccgcgtcgtcaagacacctggt 142
|| || ||||||||||| ||||||
Sbjct: 420 acgcgggtcgtcaagacccctggt 443
Score = 65.9 bits (33), Expect = 4e-009
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 152 gtgtaccagtacaccaagaagcgcgcgagcggaccgaagtgcccagtcaccgggaagaag 211
||||||||||||||||||||| | || ||||| || ||||||| || ||||||||||||
Sbjct: 582 gtgtaccagtacaccaagaagagagccagcgggccccagtgccccgtgaccgggaagaag 641
Query: 212 atcca 216
|||||
Sbjct: 642 atcca 646
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 157,830
Number of Sequences: 832831
Number of extensions: 157830
Number of successful extensions: 46194
Number of sequences better than 0.5: 55
Number of HSP's better than 0.5 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 46091
Number of HSP's gapped (non-prelim): 78
length of query: 644
length of database: 491,359,669
effective HSP length: 19
effective length of query: 625
effective length of database: 475,535,880
effective search space: 297209925000
effective search space used: 297209925000
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)