BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161238.2.4
(753 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW680953.1|AW680953 WS1_9_A06.b1_A002 Water-stressed 1 (... 573 e-162
gb|BE363714.1|BE363714 WS1_69_C06.g2_A002 Water-stressed 1 ... 573 e-162
gb|CD221995.1|CD221995 CCC1_1_C09.b1_A007 Callus culture/ce... 573 e-162
gb|CD222353.1|CD222353 CCC1_21_F09.b1_A007 Callus culture/c... 573 e-162
gb|CD226631.1|CD226631 CCC1_47_H05.b1_A007 Callus culture/c... 573 e-162
gb|CD225895.1|CD225895 CCC1_42_B03.b1_A007 Callus culture/c... 565 e-159
gb|CD464022.1|CD464022 ETH1_48_G10.b1_A002 Ethylene-treated... 565 e-159
gb|AY047607.1| Sorghum bicolor chitinase-B mRNA, partial cds 561 e-158
gb|AY047608.1| Sorghum bicolor chitinase-B1 mRNA, complete cds 561 e-158
gb|CD220272.1|CD220272 CCC1_66_G11.b1_A007 Callus culture/c... 557 e-157
gb|BE918012.1|BE918012 OV1_8_G11.g1_A002 Ovary 1 (OV1) Sorg... 555 e-156
gb|CD223183.1|CD223183 CCC1_26_G01.g1_A007 Callus culture/c... 555 e-156
gb|AW746018.1|AW746018 WS1_38_H11.g1_A002 Water-stressed 1 ... 553 e-156
gb|CD224094.1|CD224094 CCC1_32_C12.b1_A007 Callus culture/c... 553 e-156
gb|CD226332.1|CD226332 CCC1_45_F08.b1_A007 Callus culture/c... 553 e-156
gb|AW922735.1|AW922735 DG1_45_B06.g1_A002 Dark Grown 1 (DG1... 549 e-154
gb|BE363379.1|BE363379 WS1_62_C05.g1_A002 Water-stressed 1 ... 547 e-154
gb|CN132942.1|CN132942 OX1_9_D11.b1_A002 Oxidatively-stress... 547 e-154
gb|CL160722.1|CL160722 104_351_10805186_116_31825_242 Sorgh... 523 e-147
gb|CW365833.1|CW365833 fsbb001f038i18k0 Sorghum methylation... 523 e-147
gb|AF402939.1|AF402939 Sorghum halepense chitinase-B gene, ... 521 e-146
gb|BE918591.1|BE918591 OV1_8_G11.b1_A002 Ovary 1 (OV1) Sorg... 519 e-145
gb|CD226807.1|CD226807 CCC1_48_C11.b1_A007 Callus culture/c... 513 e-144
gb|AF402938.1|AF402938 Sorghum arundinaceum chitinase-B gen... 513 e-144
gb|AW746695.1|AW746695 WS1_54_E02.g1_A002 Water-stressed 1 ... 511 e-143
gb|BG101749.1|BG101749 EM1_5_G10.b1_A002 Embryo 1 (EM1) Sor... 511 e-143
gb|CN133023.1|CN133023 OX1_9_D11.g1_A002 Oxidatively-stress... 505 e-141
gb|CD228493.1|CD228493 CCC1_8_E11.b1_A007 Callus culture/ce... 500 e-139
gb|AY048375.1| Sorghum bicolor chitinase-B gene, partial cds 498 e-139
gb|CW302450.1|CW302450 104_786_11464725_116_35662_085 Sorgh... 496 e-138
gb|BG556500.1|BG556500 EM1_37_H12.g1_A002 Embryo 1 (EM1) So... 494 e-138
gb|CD223269.1|CD223269 CCC1_27_E04.b1_A007 Callus culture/c... 492 e-137
gb|CD227859.1|CD227859 CCC1_56_F04.b1_A007 Callus culture/c... 492 e-137
gb|CD228687.1|CD228687 CCC1_9_D03.b1_A007 Callus culture/ce... 492 e-137
gb|CD220455.1|CD220455 CCC1_67_F06.b1_A007 Callus culture/c... 490 e-136
gb|CD225586.1|CD225586 CCC1_40_H10.b1_A007 Callus culture/c... 488 e-136
gb|CD222930.1|CD222930 CCC1_25_F06.b1_A007 Callus culture/c... 486 e-135
gb|CW098317.1|CW098317 104_464_11002941_148_34366_083 Sorgh... 484 e-135
gb|AW745819.1|AW745819 WS1_37_H11.g1_A002 Water-stressed 1 ... 484 e-135
gb|CD221392.1|CD221392 CCC1_54_C04.b1_A007 Callus culture/c... 484 e-135
gb|CD224145.1|CD224145 CCC1_32_A09.b1_A007 Callus culture/c... 484 e-135
gb|CD226496.1|CD226496 CCC1_46_E08.b1_A007 Callus culture/c... 484 e-135
gb|CD228140.1|CD228140 CCC1_6_E03.b1_A007 Callus culture/ce... 484 e-135
gb|CD229477.1|CD229477 CCC1_16_C07.b1_A007 Callus culture/c... 476 e-132
gb|AW924422.1|AW924422 WS1_69_C06.b1_A002 Water-stressed 1 ... 462 e-128
gb|CD432114.1|CD432114 ETH1_26_H07.b1_A002 Ethylene-treated... 458 e-127
gb|CD229267.1|CD229267 CCC1_14_D09.b1_A007 Callus culture/c... 454 e-126
gb|CW275250.1|CW275250 104_748_11404861_148_35382_055 Sorgh... 446 e-123
gb|CW088904.1|CW088904 104_434_10948392_114_32602_096 Sorgh... 442 e-122
gb|CW448428.1|CW448428 fsbb001f182a11k0 Sorghum methylation... 440 e-122
gb|AW922776.1|AW922776 DG1_46_C01.g1_A002 Dark Grown 1 (DG1... 426 e-117
gb|CN151360.1|CN151360 WOUND1_75_B02.b1_A002 Wounded leaves... 426 e-117
gb|CX610007.1|CX610007 ANR1_16_C10.b1_A002 Anaerobic roots ... 426 e-117
gb|CX613448.1|CX613448 GABR1_8_E12.b1_A002 GA- or brassinol... 426 e-117
gb|CD223155.1|CD223155 CCC1_26_G01.b1_A007 Callus culture/c... 424 e-117
gb|CD220568.1|CD220568 CCC1_68_B04.b1_A007 Callus culture/c... 418 e-115
gb|CW066077.1|CW066077 104_313_10523499_114_30148 Sorghum m... 410 e-113
gb|CN135214.1|CN135214 OX1_31_G02.b1_A002 Oxidatively-stres... 408 e-112
gb|BG463695.1|BG463695 EM1_50_H02.g1_A002 Embryo 1 (EM1) So... 404 e-111
gb|CW150339.1|CW150339 104_549_11142974_116_36302_051 Sorgh... 402 e-110
gb|AW924229.1|AW924229 WS1_51_H04.b1_A002 Water-stressed 1 ... 394 e-108
gb|CD423411.1|CD423411 SA1_23_C09.b1_A002 Salicylic acid-tr... 389 e-106
gb|BG464391.1|BG464391 EM1_69_B11.g1_A002 Embryo 1 (EM1) So... 383 e-104
gb|DQ190422.1| Sorghum halepense isolate hal3 chitinase-B (... 383 e-104
gb|DQ190423.1| Sorghum halepense isolate hal4 chitinase-B (... 383 e-104
gb|DQ190424.1| Sorghum halepense isolate hal6 chitinase-B (... 383 e-104
gb|CW117036.1|CW117036 104_493_11107443_148_34610_016 Sorgh... 377 e-102
gb|CW318996.1|CW318996 104_811_11474252_116_35881_074 Sorgh... 367 e-099
gb|CW357974.1|CW357974 fsbb001f024n22k0 Sorghum methylation... 367 e-099
gb|BE359997.1|BE359997 DG1_60_H07.g2_A002 Dark Grown 1 (DG1... 367 e-099
gb|CD226725.1|CD226725 CCC1_47_H05.g1_A007 Callus culture/c... 365 4e-099
gb|CD228683.1|CD228683 CCC1_9_D11.b1_A007 Callus culture/ce... 365 4e-099
gb|CW489486.1|CW489486 fsbb001f274h04f0 Sorghum methylation... 363 2e-098
gb|BE357811.1|BE357811 DG1_22_D10.g1_A002 Dark Grown 1 (DG1... 363 2e-098
gb|BG049497.1|BG049497 OV1_20_G04.g1_A002 Ovary 1 (OV1) Sor... 363 2e-098
gb|CD222097.1|CD222097 CCC1_2_C04.b1_A007 Callus culture/ce... 359 2e-097
gb|CD220604.1|CD220604 CCC1_68_C10.b1_A007 Callus culture/c... 355 4e-096
gb|BG102665.1|BG102665 RHIZ2_35_G08.g1_A003 Rhizome2 (RHIZ2... 341 6e-092
gb|CD464127.1|CD464127 ETH1_48_G10.g1_A002 Ethylene-treated... 337 9e-091
gb|CW119449.1|CW119449 104_496_11108775_116_34638_058 Sorgh... 329 2e-088
gb|AW924442.1|AW924442 WS1_69_C06.g1_A002 Water-stressed 1 ... 329 2e-088
gb|CD222500.1|CD222500 CCC1_22_B03.b1_A007 Callus culture/c... 329 2e-088
gb|CD221665.1|CD221665 CCC1_70_G05.b1_A007 Callus culture/c... 325 3e-087
gb|BG049053.1|BG049053 OV1_22_F09.g1_A002 Ovary 1 (OV1) Sor... 323 1e-086
gb|CD463839.1|CD463839 ETH1_47_H03.b1_A002 Ethylene-treated... 323 1e-086
gb|CD463973.1|CD463973 ETH1_47_H03.g1_A002 Ethylene-treated... 323 1e-086
gb|CD222476.1|CD222476 CCC1_22_B04.b1_A007 Callus culture/c... 321 5e-086
gb|CF770982.1|CF770982 DSBF1_12_D05.g1_A010 Drought-stresse... 321 5e-086
gb|CN151443.1|CN151443 WOUND1_75_B02.g1_A002 Wounded leaves... 315 3e-084
gb|CD221837.1|CD221837 CCC1_71_F05.b1_A007 Callus culture/c... 313 1e-083
gb|CD431984.1|CD431984 ETH1_12_F04.b1_A002 Ethylene-treated... 309 2e-082
gb|CN135290.1|CN135290 OX1_31_G02.g1_A002 Oxidatively-stres... 305 3e-081
gb|CX613534.1|CX613534 GABR1_8_E12.g1_A002 GA- or brassinol... 283 1e-074
gb|CD222724.1|CD222724 CCC1_23_G10.g1_A007 Callus culture/c... 280 2e-073
gb|CD226424.1|CD226424 CCC1_45_F08.g1_A007 Callus culture/c... 280 2e-073
gb|CD227445.1|CD227445 CCC1_51_E06.g1_A007 Callus culture/c... 280 2e-073
gb|CD229356.1|CD229356 CCC1_14_A10.g1_A007 Callus culture/c... 280 2e-073
gb|CD229358.1|CD229358 CCC1_14_E11.g1_A007 Callus culture/c... 280 2e-073
gb|CD432211.1|CD432211 ETH1_26_H07.g1_A002 Ethylene-treated... 280 2e-073
gb|CD228603.1|CD228603 CCC1_8_E11.g1_A007 Callus culture/ce... 276 3e-072
gb|CX610094.1|CX610094 ANR1_16_C10.g1_A002 Anaerobic roots ... 276 3e-072
gb|CW493211.1|CW493211 fsbb001f283n22k0 Sorghum methylation... 270 2e-070
gb|CW150340.1|CW150340 104_549_11142974_148_36301_051 Sorgh... 268 7e-070
gb|CD220668.1|CD220668 CCC1_68_B04.g1_A007 Callus culture/c... 266 3e-069
gb|AW745790.1|AW745790 WS1_37_H11.b1_A002 Water-stressed 1 ... 264 1e-068
gb|CD221556.1|CD221556 CCC1_55_F09.g1_A007 Callus culture/c... 262 4e-068
gb|CD222883.1|CD222883 CCC1_24_C04.g1_A007 Callus culture/c... 262 4e-068
gb|CD223234.1|CD223234 CCC1_26_D09.g1_A007 Callus culture/c... 262 4e-068
gb|CD226602.1|CD226602 CCC1_46_E08.g1_A007 Callus culture/c... 262 4e-068
gb|CD226002.1|CD226002 CCC1_42_B03.g1_A007 Callus culture/c... 256 3e-066
gb|CD229697.1|CD229697 CCC1_18_D08.g1_A007 Callus culture/c... 256 3e-066
gb|CD223041.1|CD223041 CCC1_25_F06.g1_A007 Callus culture/c... 254 1e-065
gb|CX616381.1|CX616381 GABR1_27_C09.g1_A002 GA- or brassino... 254 1e-065
gb|CD229563.1|CD229563 CCC1_16_C07.g1_A007 Callus culture/c... 246 2e-063
gb|CD236439.1|CD236439 SS1_34_G03.b1_A012 Salt-stressed see... 246 2e-063
gb|CD223379.1|CD223379 CCC1_27_E04.g1_A007 Callus culture/c... 242 4e-062
gb|CD220577.1|CD220577 CCC1_68_C11.b1_A007 Callus culture/c... 238 6e-061
gb|CD222692.1|CD222692 CCC1_23_G09.g1_A007 Callus culture/c... 238 6e-061
gb|CN134928.1|CN134928 OX1_29_A10.g1_A002 Oxidatively-stres... 238 6e-061
gb|CW437319.1|CW437319 fsbb001f154g03k0 Sorghum methylation... 234 9e-060
gb|CD223848.1|CD223848 CCC1_30_F03.g1_A007 Callus culture/c... 234 9e-060
gb|CD229365.1|CD229365 CCC1_14_D09.g1_A007 Callus culture/c... 234 9e-060
gb|CD229903.1|CD229903 CCC1_20_C03.g1_A007 Callus culture/c... 230 1e-058
gb|CD220381.1|CD220381 CCC1_66_G11.g1_A007 Callus culture/c... 228 6e-058
gb|CD220480.1|CD220480 CCC1_67_F06.g1_A007 Callus culture/c... 228 6e-058
gb|CD220708.1|CD220708 CCC1_68_C10.g1_A007 Callus culture/c... 228 6e-058
gb|CD222029.1|CD222029 CCC1_1_C09.g1_A007 Callus culture/ce... 228 6e-058
gb|CD227763.1|CD227763 CCC1_53_C09.g1_A007 Callus culture/c... 226 2e-057
gb|CD226858.1|CD226858 CCC1_48_E04.g1_A007 Callus culture/c... 224 9e-057
gb|CW280673.1|CW280673 104_756_11407748_148_35454_080 Sorgh... 220 1e-055
gb|CD228252.1|CD228252 CCC1_6_E03.g1_A007 Callus culture/ce... 220 1e-055
gb|CD462568.1|CD462568 ETH1_38_G06.g1_A002 Ethylene-treated... 220 1e-055
gb|CW039394.1|CW039394 104_272_10505475_115_30390 Sorghum m... 218 6e-055
gb|CD228270.1|CD228270 CCC1_6_F02.g1_A007 Callus culture/ce... 218 6e-055
gb|CD423525.1|CD423525 SA1_23_C09.g1_A002 Salicylic acid-tr... 218 6e-055
gb|BG557755.1|BG557755 EM1_56_F01.g1_A002 Embryo 1 (EM1) So... 212 3e-053
gb|BE362915.2|BE362915 DG1_90_E12.g1_A002 Dark Grown 1 (DG1... 210 1e-052
gb|BG412507.1|BG412507 OV2_35_C01.g1_A002 Ovary 2 (OV2) Sor... 208 5e-052
gb|CD220677.1|CD220677 CCC1_68_C11.g1_A007 Callus culture/c... 208 5e-052
gb|CD224981.1|CD224981 CCC1_37_D02.g1_A007 Callus culture/c... 208 5e-052
gb|CD225687.1|CD225687 CCC1_40_B05.g1_A007 Callus culture/c... 208 5e-052
gb|AW678309.1|AW678309 WS1_14_G01.g1_A002 Water-stressed 1 ... 206 2e-051
gb|CD223669.1|CD223669 CCC1_29_G02.g1_A007 Callus culture/c... 206 2e-051
gb|CW159279.1|CW159279 104_565_11149276_116_36410_010 Sorgh... 204 8e-051
gb|CW265113.1|CW265113 104_734_11231683_116_35257_076 Sorgh... 202 3e-050
gb|BG649146.1|BG649146 EM1_56_F01.b1_A002 Embryo 1 (EM1) So... 200 1e-049
gb|CW110423.1|CW110423 104_483_11103696_148_34524_094 Sorgh... 198 5e-049
gb|CW447826.1|CW447826 fsbb001f181b24f0 Sorghum methylation... 194 8e-048
gb|CD228767.1|CD228767 CCC1_9_D11.g1_A007 Callus culture/ce... 188 5e-046
gb|CN134927.1|CN134927 OX1_29_A09.g1_A002 Oxidatively-stres... 186 2e-045
gb|CW231901.1|CW231901 104_681_11211372_148_37350_042 Sorgh... 184 8e-045
gb|CW285685.1|CW285685 104_763_11410466_148_35506_013 Sorgh... 184 8e-045
gb|BG464063.1|BG464063 EM1_69_B11.b1_A002 Embryo 1 (EM1) So... 174 8e-042
gb|CD229825.1|CD229825 CCC1_19_F11.g1_A007 Callus culture/c... 172 3e-041
gb|CW200665.1|CW200665 104_626_11184168_148_36867_092 Sorgh... 168 5e-040
gb|CD432032.1|CD432032 ETH1_12_F04.g1_A002 Ethylene-treated... 168 5e-040
gb|CW284180.1|CW284180 104_760_11409637_148_35487_049 Sorgh... 167 2e-039
gb|CW350033.1|CW350033 fsbb001f011c12f0 Sorghum methylation... 167 2e-039
gb|CW445566.1|CW445566 fsbb001f170m12f0 Sorghum methylation... 167 2e-039
gb|CW464036.1|CW464036 fsbb001f213a24k0 Sorghum methylation... 167 2e-039
gb|BE358239.1|BE358239 DG1_26_D03.b2_A002 Dark Grown 1 (DG1... 167 2e-039
gb|CL191324.1|CL191324 104_410_10906720_114_32533_060 Sorgh... 159 5e-037
gb|CN130309.1|CN130309 RHOH1_40_D04.g1_A002 Acid- and alkal... 155 7e-036
gb|CD222193.1|CD222193 CCC1_2_C04.g1_A007 Callus culture/ce... 153 3e-035
gb|CW056944.1|CW056944 104_298_10517953_114_30151 Sorghum m... 151 1e-034
gb|CW324492.1|CW324492 104_819_11477191_148_35910_030 Sorgh... 151 1e-034
gb|CW363965.1|CW363965 fsbb001f035m22f0 Sorghum methylation... 151 1e-034
gb|BE357733.1|BE357733 DG1_22_D10.b1_A002 Dark Grown 1 (DG1... 151 1e-034
gb|CD227568.1|CD227568 CCC1_52_A02.b1_A007 Callus culture/c... 151 1e-034
gb|AW922596.1|AW922596 DG1_46_C01.b1_A002 Dark Grown 1 (DG1... 149 4e-034
gb|BE357497.1|BE357497 DG1_20_E06.b2_A002 Dark Grown 1 (DG1... 139 4e-031
gb|BG356189.1|BG356189 EM1_22_E10.b1_A002 Embryo 1 (EM1) So... 137 2e-030
gb|CD223287.1|CD223287 CCC1_27_C12.b1_A007 Callus culture/c... 135 7e-030
gb|CD223396.1|CD223396 CCC1_27_C12.g1_A007 Callus culture/c... 135 7e-030
gb|CW204755.1|CW204755 104_632_11186715_116_37060_002 Sorgh... 131 1e-028
gb|CW065719.1|CW065719 104_312_10523301_114_30129 Sorghum m... 129 4e-028
gb|CW246023.1|CW246023 104_706_11221179_148_37598_002 Sorgh... 127 2e-027
gb|CW230071.1|CW230071 104_671_11207654_116_37270_053 Sorgh... 125 6e-027
gb|CW405242.1|CW405242 fsbb001f097l13f0 Sorghum methylation... 125 6e-027
gb|CD228772.1|CD228772 CCC1_9_D03.g1_A007 Callus culture/ce... 123 2e-026
gb|CW030154.1|CW030154 104_258_10500091_114_30403 Sorghum m... 117 2e-024
gb|CD227591.1|CD227591 CCC1_52_A02.g1_A007 Callus culture/c... 117 2e-024
gb|AW746429.1|AW746429 WS1_53_G09.b1_A002 Water-stressed 1 ... 111 9e-023
gb|CW400945.1|CW400945 fsbb001f091i05f0 Sorghum methylation... 109 4e-022
gb|CW159280.1|CW159280 104_565_11149276_148_36409_010 Sorgh... 107 1e-021
gb|CW265114.1|CW265114 104_734_11231683_148_35261_076 Sorgh... 107 1e-021
gb|AW746206.1|AW746206 WS1_40_B10.b1_A002 Water-stressed 1 ... 107 1e-021
gb|CF675624.1|CF675624 CHTN3 Subtractive cDNA library from ... 107 1e-021
gb|BE593437.1|BE593437 WS1_97_H03.b1_A002 Water-stressed 1 ... 105 6e-021
gb|AW672289.1|AW672289 LG1_358_A05.b1_A002 Light Grown 1 (L... 103 2e-020
gb|CW204756.1|CW204756 104_632_11186715_148_36922_002 Sorgh... 101 9e-020
gb|CW069060.1|CW069060 104_318_10525580_1_30095 Sorghum met... 100 4e-019
gb|CW324491.1|CW324491 104_819_11477191_116_35914_030 Sorgh... 100 4e-019
gb|CW400946.1|CW400946 fsbb001f091i05k0 Sorghum methylation... 100 4e-019
gb|AW923860.1|AW923860 DG1_60_H07.g1_A002 Dark Grown 1 (DG1... 100 4e-019
gb|BG047953.1|BG047953 OV1_25_H02.g1_A002 Ovary 1 (OV1) Sor... 98 1e-018
gb|BG411799.1|BG411799 OV2_38_C01.g1_A002 Ovary 2 (OV2) Sor... 96 6e-018
gb|BF507073.1|BF507073 17205P-8c Pooled green leaf and root... 90 3e-016
gb|CD223123.1|CD223123 CCC1_26_D09.b1_A007 Callus culture/c... 90 3e-016
gb|CN130235.1|CN130235 RHOH1_40_D04.b1_A002 Acid- and alkal... 88 1e-015
gb|BG556657.1|BG556657 EM1_37_H12.b1_A002 Embryo 1 (EM1) So... 86 5e-015
gb|BF507065.1|BF507065 17205P-2 Pooled green leaf and root ... 80 3e-013
gb|BG047595.1|BG047595 OV1_25_H02.b1_A002 Ovary 1 (OV1) Sor... 80 3e-013
gb|BZ338038.1|BZ338038 ia92e12.b1 WGS-SbicolorF (JM107 adap... 76 5e-012
gb|CW276618.1|CW276618 104_750_11405587_148_35398_074 Sorgh... 76 5e-012
gb|CW388024.1|CW388024 fsbb001f072j20f0 Sorghum methylation... 76 5e-012
gb|CW388025.1|CW388025 fsbb001f072j20k0 Sorghum methylation... 76 5e-012
gb|CL160721.1|CL160721 104_351_10805186_114_31824_242 Sorgh... 74 2e-011
gb|CD229831.1|CD229831 CCC1_19_B02.g1_A007 Callus culture/c... 74 2e-011
gb|CW307372.1|CW307372 104_795_11468105_148_35736_073 Sorgh... 70 3e-010
gb|AW287001.2|AW287001 LG1_264_C03.b1_A002 Light Grown 1 (L... 70 3e-010
gb|BG102992.1|BG102992 RHIZ2_35_G08.b1_A003 Rhizome2 (RHIZ2... 62 8e-008
gb|CW206617.1|CW206617 104_635_11187687_116_36961_058 Sorgh... 56 5e-006
gb|CW488277.1|CW488277 fsbb001f254j12f0 Sorghum methylation... 56 5e-006
gb|BE597800.1|BE597800 PI1_65_E11.g1_A002 Pathogen induced ... 56 5e-006
gb|BE598085.1|BE598085 PI1_65_E11.b1_A002 Pathogen induced ... 56 5e-006
gb|CD236461.1|CD236461 SS1_34_G03.g1_A012 Salt-stressed see... 56 5e-006
gb|CW263590.1|CW263590 104_731_11230799_148_35217_082 Sorgh... 54 2e-005
gb|CN129927.1|CN129927 RHOH1_38_F07.b1_A002 Acid- and alkal... 54 2e-005
gb|CN130014.1|CN130014 RHOH1_38_F07.g1_A002 Acid- and alkal... 54 2e-005
gb|BE597906.1|BE597906 PI1_66_H02.g1_A002 Pathogen induced ... 48 0.001
gb|BE598196.1|BE598196 PI1_66_H02.b1_A002 Pathogen induced ... 48 0.001
gb|CW054562.1|CW054562 104_295_10516602_114_30186 Sorghum m... 46 0.005
gb|CW120215.1|CW120215 104_497_11109200_148_34647_024 Sorgh... 46 0.005
gb|CW285684.1|CW285684 104_763_11410466_116_35510_013 Sorgh... 46 0.005
gb|CW302451.1|CW302451 104_786_11464725_148_35666_085 Sorgh... 46 0.005
gb|CW365832.1|CW365832 fsbb001f038i18f0 Sorghum methylation... 46 0.005
gb|CW429227.1|CW429227 fsbb001f142f23f0 Sorghum methylation... 46 0.005
gb|CW448427.1|CW448427 fsbb001f182a11f0 Sorghum methylation... 46 0.005
gb|CW493210.1|CW493210 fsbb001f283n22f0 Sorghum methylation... 46 0.005
gb|CD228156.1|CD228156 CCC1_6_F02.b1_A007 Callus culture/ce... 46 0.005
gb|CW115862.1|CW115862 104_491_11106791_116_34598_092 Sorgh... 44 0.018
gb|CW207919.1|CW207919 104_637_11188406_116_37044_059 Sorgh... 44 0.018
gb|CW350034.1|CW350034 fsbb001f011c12k0 Sorghum methylation... 44 0.018
gb|BG048760.1|BG048760 OV1_22_F09.b1_A002 Ovary 1 (OV1) Sor... 44 0.018
gb|BZ330961.1|BZ330961 hw03d05.g1 WGS-SbicolorF (JM107 adap... 42 0.073
gb|CL150624.1|CL150624 104_332_10778666_116_31358_218 Sorgh... 42 0.073
gb|CW418572.1|CW418572 fsbb001f123b03f0 Sorghum methylation... 42 0.073
gb|CW451829.1|CW451829 fsbb001f192b10k0 Sorghum methylation... 42 0.073
gb|CW483836.1|CW483836 fsbb001f245k16f0 Sorghum methylation... 42 0.073
gb|BE361299.1|BE361299 DG1_71_C03.b1_A002 Dark Grown 1 (DG1... 42 0.073
gb|CN125314.1|CN125314 RHOH1_10_G12.b1_A002 Acid- and alkal... 42 0.073
gb|CL161206.1|CL161206 104_352_10805558_116_31827_230 Sorgh... 40 0.29
gb|CW231709.1|CW231709 104_681_11211268_116_37346_014 Sorgh... 40 0.29
gb|CW266083.1|CW266083 104_735_11232237_148_35267_085 Sorgh... 40 0.29
gb|CW430428.1|CW430428 fsbb001f144c05f0 Sorghum methylation... 40 0.29
gb|CW430429.1|CW430429 fsbb001f144c05k0 Sorghum methylation... 40 0.29
gb|BE358858.1|BE358858 DG1_32_F07.g1_A002 Dark Grown 1 (DG1... 40 0.29
gb|CD429983.1|CD429983 ETH1_16_A10.g1_A002 Ethylene-treated... 40 0.29
gb|CF486513.1|CF486513 POL1_38_D07.b1_A002 Pollen Sorghum b... 40 0.29
gb|CN130329.1|CN130329 RHOH1_40_F08.g1_A002 Acid- and alkal... 40 0.29
gb|CN137269.1|CN137269 OX1_56_F03.b1_A002 Oxidatively-stres... 40 0.29
gb|CN137353.1|CN137353 OX1_56_F03.g1_A002 Oxidatively-stres... 40 0.29
>gb|AW680953.1|AW680953 WS1_9_A06.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 536
Score = 573 bits (289), Expect = e-162
Identities = 390/425 (91%)
Strand = Plus / Minus
Query: 244 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 303
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 468 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 409
Query: 304 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 363
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 408 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 349
Query: 364 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 423
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 348 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 289
Query: 424 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 483
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 288 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 229
Query: 484 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 543
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 228 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 169
Query: 544 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcg 603
|||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||| |
Sbjct: 168 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgctcgag 109
Query: 604 tcgcagtaggcgttgctcttnttgatctcgctgatgtagcnnnaatgtccggtctcgtgc 663
||||||||||||||| |||| ||||||||||||||||||| |||| |||||||||||
Sbjct: 108 tcgcagtaggcgttgttcttgttgatctcgctgatgtagcagaaatgcccggtctcgtgg 49
Query: 664 gtgac 668
|||||
Sbjct: 48 gtgac 44
Score = 50.1 bits (25), Expect = 3e-004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 189 ttcgcgagggtgcgacgccgagcat 213
|||||||||||||||||||||||||
Sbjct: 535 ttcgcgagggtgcgacgccgagcat 511
>gb|BE363714.1|BE363714 WS1_69_C06.g2_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 705
Score = 573 bits (289), Expect = e-162
Identities = 390/425 (91%)
Strand = Plus / Minus
Query: 244 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 303
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 470 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 411
Query: 304 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 363
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 410 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 351
Query: 364 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 423
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 350 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 291
Query: 424 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 483
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 290 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 231
Query: 484 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 543
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 230 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 171
Query: 544 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcg 603
|||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||| |
Sbjct: 170 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgctcgag 111
Query: 604 tcgcagtaggcgttgctcttnttgatctcgctgatgtagcnnnaatgtccggtctcgtgc 663
||||||||||||||| |||| ||||||||||||||||||| |||| |||||||||||
Sbjct: 110 tcgcagtaggcgttgttcttgttgatctcgctgatgtagcagaaatgcccggtctcgtgg 51
Query: 664 gtgac 668
|||||
Sbjct: 50 gtgac 46
Score = 58.0 bits (29), Expect = 1e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 177 taaactcttggtttcgcgagggtgcgacgccgagcat 213
|||||||| |||||||||||||||||||||||||||
Sbjct: 549 taaactctgtgtttcgcgagggtgcgacgccgagcat 513
>gb|CD221995.1|CD221995 CCC1_1_C09.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_1_C09_A007 3', mRNA sequence
Length = 637
Score = 573 bits (289), Expect = e-162
Identities = 390/425 (91%)
Strand = Plus / Minus
Query: 244 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 303
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 478 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 419
Query: 304 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 363
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 418 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 359
Query: 364 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 423
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 358 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 299
Query: 424 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 483
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 298 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 239
Query: 484 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 543
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 238 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 179
Query: 544 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcg 603
|||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||| |
Sbjct: 178 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgctcgag 119
Query: 604 tcgcagtaggcgttgctcttnttgatctcgctgatgtagcnnnaatgtccggtctcgtgc 663
||||||||||||||| |||| ||||||||||||||||||| |||| |||||||||||
Sbjct: 118 tcgcagtaggcgttgttcttgttgatctcgctgatgtagcagaaatgcccggtctcgtgg 59
Query: 664 gtgac 668
|||||
Sbjct: 58 gtgac 54
Score = 58.0 bits (29), Expect = 1e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 177 taaactcttggtttcgcgagggtgcgacgccgagcat 213
|||||||| |||||||||||||||||||||||||||
Sbjct: 557 taaactctgtgtttcgcgagggtgcgacgccgagcat 521
>gb|CD222353.1|CD222353 CCC1_21_F09.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_21_F09_A007 3', mRNA sequence
Length = 647
Score = 573 bits (289), Expect = e-162
Identities = 390/425 (91%)
Strand = Plus / Minus
Query: 244 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 303
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 488 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 429
Query: 304 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 363
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 428 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 369
Query: 364 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 423
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 368 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 309
Query: 424 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 483
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 308 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 249
Query: 484 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 543
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 248 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 189
Query: 544 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcg 603
|||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||| |
Sbjct: 188 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgctcgag 129
Query: 604 tcgcagtaggcgttgctcttnttgatctcgctgatgtagcnnnaatgtccggtctcgtgc 663
||||||||||||||| |||| ||||||||||||||||||| |||| |||||||||||
Sbjct: 128 tcgcagtaggcgttgttcttgttgatctcgctgatgtagcagaaatgcccggtctcgtgg 69
Query: 664 gtgac 668
|||||
Sbjct: 68 gtgac 64
Score = 58.0 bits (29), Expect = 1e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 177 taaactcttggtttcgcgagggtgcgacgccgagcat 213
|||||||| |||||||||||||||||||||||||||
Sbjct: 567 taaactctgtgtttcgcgagggtgcgacgccgagcat 531
>gb|CD226631.1|CD226631 CCC1_47_H05.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_47_H05_A007 3', mRNA sequence
Length = 658
Score = 573 bits (289), Expect = e-162
Identities = 390/425 (91%)
Strand = Plus / Minus
Query: 244 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 303
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 490 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 431
Query: 304 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 363
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 430 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 371
Query: 364 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 423
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 370 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 311
Query: 424 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 483
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 310 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 251
Query: 484 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 543
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 250 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 191
Query: 544 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcg 603
|||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||| |
Sbjct: 190 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgctcgag 131
Query: 604 tcgcagtaggcgttgctcttnttgatctcgctgatgtagcnnnaatgtccggtctcgtgc 663
||||||||||||||| |||| ||||||||||||||||||| |||| |||||||||||
Sbjct: 130 tcgcagtaggcgttgttcttgttgatctcgctgatgtagcagaaatgcccggtctcgtgg 71
Query: 664 gtgac 668
|||||
Sbjct: 70 gtgac 66
Score = 58.0 bits (29), Expect = 1e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 177 taaactcttggtttcgcgagggtgcgacgccgagcat 213
|||||||| |||||||||||||||||||||||||||
Sbjct: 569 taaactctgtgtttcgcgagggtgcgacgccgagcat 533
>gb|CD225895.1|CD225895 CCC1_42_B03.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_42_B03_A007 3', mRNA sequence
Length = 653
Score = 565 bits (285), Expect = e-159
Identities = 389/425 (91%)
Strand = Plus / Minus
Query: 244 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 303
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 485 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 426
Query: 304 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 363
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 425 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 366
Query: 364 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 423
||||||||||||||||||||||| ||||||| |||||| | ||||||||||| | |||||
Sbjct: 365 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgtccgtccag 306
Query: 424 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 483
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 305 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 246
Query: 484 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 543
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 245 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 186
Query: 544 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcg 603
|||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||| |
Sbjct: 185 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgctcgag 126
Query: 604 tcgcagtaggcgttgctcttnttgatctcgctgatgtagcnnnaatgtccggtctcgtgc 663
||||||||||||||| |||| ||||||||||||||||||| |||| |||||||||||
Sbjct: 125 tcgcagtaggcgttgttcttgttgatctcgctgatgtagcagaaatgcccggtctcgtgg 66
Query: 664 gtgac 668
|||||
Sbjct: 65 gtgac 61
Score = 58.0 bits (29), Expect = 1e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 177 taaactcttggtttcgcgagggtgcgacgccgagcat 213
|||||||| |||||||||||||||||||||||||||
Sbjct: 564 taaactctgtgtttcgcgagggtgcgacgccgagcat 528
>gb|CD464022.1|CD464022 ETH1_48_G10.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_48_G10_A002 3', mRNA sequence
Length = 690
Score = 565 bits (285), Expect = e-159
Identities = 389/425 (91%)
Strand = Plus / Minus
Query: 244 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 303
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 431 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 372
Query: 304 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 363
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 371 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 312
Query: 364 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 423
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 311 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 252
Query: 424 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 483
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 251 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 192
Query: 484 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 543
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 191 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 132
Query: 544 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcg 603
|| ||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||| |
Sbjct: 131 agtgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgctcgag 72
Query: 604 tcgcagtaggcgttgctcttnttgatctcgctgatgtagcnnnaatgtccggtctcgtgc 663
||||||||||||||| |||| ||||||||||||||||||| |||| |||||||||||
Sbjct: 71 tcgcagtaggcgttgttcttgttgatctcgctgatgtagcagaaatgcccggtctcgtgg 12
Query: 664 gtgac 668
|||||
Sbjct: 11 gtgac 7
Score = 58.0 bits (29), Expect = 1e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 177 taaactcttggtttcgcgagggtgcgacgccgagcat 213
|||||||| |||||||||||||||||||||||||||
Sbjct: 510 taaactctgtgtttcgcgagggtgcgacgccgagcat 474
>gb|AY047607.1| Sorghum bicolor chitinase-B mRNA, partial cds
Length = 789
Score = 561 bits (283), Expect = e-158
Identities = 387/423 (91%)
Strand = Plus / Minus
Query: 246 ctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagta 305
|||||| |||||||||||||| |||||||||| ||||||| |||||||||||||||||||
Sbjct: 789 ctagcaggtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtagta 730
Query: 306 gccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttgat 365
||| || ||||||||||||||||| | || || ||||||||||||||||||||||||||
Sbjct: 729 gcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttgat 670
Query: 366 ggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccagaa 425
||||||||||||||||||||| ||||||| |||||| | ||||||||||||| ||||| |
Sbjct: 669 ggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccagta 610
Query: 426 ccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcgag 485
||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||
Sbjct: 609 ccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcgag 550
Query: 486 cccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgcag 545
|||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||||
Sbjct: 549 cccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgcag 490
Query: 546 cgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcgtc 605
|||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||| |||
Sbjct: 489 cgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgctcgagtc 430
Query: 606 gcagtaggcgttgctcttnttgatctcgctgatgtagcnnnaatgtccggtctcgtgcgt 665
||||||||||||| |||| ||||||||||||||||||| |||| ||||||||||| ||
Sbjct: 429 gcagtaggcgttgttcttgttgatctcgctgatgtagcagaaatgcccggtctcgtgggt 370
Query: 666 gac 668
|||
Sbjct: 369 gac 367
>gb|AY047608.1| Sorghum bicolor chitinase-B1 mRNA, complete cds
Length = 819
Score = 561 bits (283), Expect = e-158
Identities = 387/423 (91%)
Strand = Plus / Minus
Query: 246 ctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagta 305
||||||| ||||||||||||| |||||||||| ||||||| |||||||||||||||||||
Sbjct: 819 ctagcaaatgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtagta 760
Query: 306 gccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttgat 365
||| || ||||||||||||||||| | || || ||||||||||||||||||||||||||
Sbjct: 759 gcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttgat 700
Query: 366 ggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccagaa 425
||||||||||||||||||||| ||||||| |||||| | ||||||||||||| ||||| |
Sbjct: 699 ggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccagta 640
Query: 426 ccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcgag 485
||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||
Sbjct: 639 ccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcgag 580
Query: 486 cccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgcag 545
|||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||||
Sbjct: 579 cccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgcag 520
Query: 546 cgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcgtc 605
|||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||| |||
Sbjct: 519 cgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgctcgagtc 460
Query: 606 gcagtaggcgttgctcttnttgatctcgctgatgtagcnnnaatgtccggtctcgtgcgt 665
||||||||||||| |||| ||||||||||||||||||| |||| ||||||||||| ||
Sbjct: 459 gcagtaggcgttgttcttgttgatctcgctgatgtagcagaaatgcccggtctcgtgggt 400
Query: 666 gac 668
|||
Sbjct: 399 gac 397
>gb|CD220272.1|CD220272 CCC1_66_G11.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_66_G11_A007 3', mRNA sequence
Length = 614
Score = 557 bits (281), Expect = e-157
Identities = 388/425 (91%)
Strand = Plus / Minus
Query: 244 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 303
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 433 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 374
Query: 304 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 363
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 373 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 314
Query: 364 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 423
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 313 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 254
Query: 424 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 483
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 253 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 194
Query: 484 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 543
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 193 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 134
Query: 544 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcg 603
||||||||||||||||||||||||| ||||| ||||| ||||||||| ||||||||| |
Sbjct: 133 ggcgggccgcgcccgtagtacttctgtcccgcggcgcagggccactgcttgttgctcgag 74
Query: 604 tcgcagtaggcgttgctcttnttgatctcgctgatgtagcnnnaatgtccggtctcgtgc 663
||||||||||||||| |||| ||||||||||||||||||| |||| |||||||||||
Sbjct: 73 tcgcagtaggcgttgttcttgttgatctcgctgatgtagcagaaatgcccggtctcgtgg 14
Query: 664 gtgac 668
|||||
Sbjct: 13 gtgac 9
Score = 58.0 bits (29), Expect = 1e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 177 taaactcttggtttcgcgagggtgcgacgccgagcat 213
|||||||| |||||||||||||||||||||||||||
Sbjct: 512 taaactctgtgtttcgcgagggtgcgacgccgagcat 476
>gb|BE918012.1|BE918012 OV1_8_G11.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 710
Score = 555 bits (280), Expect = e-156
Identities = 393/432 (90%)
Strand = Plus / Minus
Query: 245 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 304
||||||||||||||||||| || |||||||||| ||||||||||||||||||| ||||||
Sbjct: 563 cctagcaagtgaggttgggtccggggtcgacgccgagctgctggcagtactgcctgtagt 504
Query: 305 agccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttga 364
|||| || ||||||||||||||||| | || || |||||||||||||||||||||||||
Sbjct: 503 agcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttga 444
Query: 365 tggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccaga 424
|||||||||||||||||||||| ||||||| |||||| | |||||||||||| ||||||
Sbjct: 443 tggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttggtccaga 384
Query: 425 accagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcga 484
|||||||||||||||||||||||| ||||||||||||||||||||||| |||| |
Sbjct: 383 accagagcgccgtcttgaacgcgaccacggcgtcctgcgccaccctgtccgggttccgaa 324
Query: 485 gcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgca 544
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 323 gcccgtcgaagccgatgtccctcccggcaggcccgtagttgtagttccacgagatttgca 264
Query: 545 gcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcgt 604
||||||||||||||||||||||||| ||||| || |||||||||||||||||||||| ||
Sbjct: 263 gcgggccgcgcccgtagtacttctgacccgcggcacacggccactgcctgttgctcgagt 204
Query: 605 cgcagtaggcgttgctcttnttgatctcgctgatgtagcnnnaatgtccggtctcgtgcg 664
|||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 203 cgcagtaggcgttgttcttgttgatctcgctgatgtagcagaaatgtccggtctcgtgcg 144
Query: 665 tgacgtgcgcga 676
||| ||| ||||
Sbjct: 143 tgatgtgggcga 132
>gb|CD223183.1|CD223183 CCC1_26_G01.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_26_G01_A007 5', mRNA sequence
Length = 662
Score = 555 bits (280), Expect = e-156
Identities = 393/432 (90%)
Strand = Plus / Minus
Query: 245 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 304
||||||||||||||||||| || |||||||||| ||||||||||||||||||| ||||||
Sbjct: 574 cctagcaagtgaggttgggtccggggtcgacgccgagctgctggcagtactgcctgtagt 515
Query: 305 agccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttga 364
|||| || ||||||||||||||||| | || || |||||||||||||||||||||||||
Sbjct: 514 agcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttga 455
Query: 365 tggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccaga 424
|||||||||||||||||||||| ||||||| |||||| | |||||||||||| ||||||
Sbjct: 454 tggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttggtccaga 395
Query: 425 accagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcga 484
|||||||||||||||||||||||| ||||||||||||||||||||||| |||| |
Sbjct: 394 accagagcgccgtcttgaacgcgaccacggcgtcctgcgccaccctgtccgggttccgaa 335
Query: 485 gcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgca 544
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 334 gcccgtcgaagccgatgtccctcccggcaggcccgtagttgtagttccacgagatttgca 275
Query: 545 gcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcgt 604
||||||||||||||||||||||||| ||||| || |||||||||||||||||||||| ||
Sbjct: 274 gcgggccgcgcccgtagtacttctgacccgcggcacacggccactgcctgttgctcgagt 215
Query: 605 cgcagtaggcgttgctcttnttgatctcgctgatgtagcnnnaatgtccggtctcgtgcg 664
|||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 214 cgcagtaggcgttgttcttgttgatctcgctgatgtagcagaaatgtccggtctcgtgcg 155
Query: 665 tgacgtgcgcga 676
||| ||| ||||
Sbjct: 154 tgatgtgggcga 143
>gb|AW746018.1|AW746018 WS1_38_H11.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 615
Score = 553 bits (279), Expect = e-156
Identities = 386/423 (91%)
Strand = Plus / Minus
Query: 245 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 304
||||||||||||||||||| || |||||||||| ||||||||||||||||||| ||||||
Sbjct: 431 cctagcaagtgaggttgggtccggggtcgacgccgagctgctggcagtactgcctgtagt 372
Query: 305 agccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttga 364
|||| || ||||||||||||||||| | || || |||||||||||||||||||||||||
Sbjct: 371 agcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttga 312
Query: 365 tggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccaga 424
|||||||||||||||||||||| ||||||| |||||| | |||||||||||| ||||||
Sbjct: 311 tggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttggtccaga 252
Query: 425 accagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcga 484
|||||||||||||||||||||||| ||||||||||||||||||||||| |||| |
Sbjct: 251 accagagcgccgtcttgaacgcgaccacggcgtcctgcgccaccctgtccgggttccgaa 192
Query: 485 gcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgca 544
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 191 gcccgtcgaagccgatgtccctcccggcaggcccgtagttgtagttccacgagatttgca 132
Query: 545 gcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcgt 604
||||||||||||||||||||||||| ||||| || |||||||||||||||||||||| ||
Sbjct: 131 gcgggccgcgcccgtagtacttctgacccgcggcacacggccactgcctgttgctcgagt 72
Query: 605 cgcagtaggcgttgctcttnttgatctcgctgatgtagcnnnaatgtccggtctcgtgcg 664
|||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 71 cgcagtaggcgttgttcttgttgatctcgctgatgtagcagaaatgtccggtctcgtgcg 12
Query: 665 tga 667
|||
Sbjct: 11 tga 9
Score = 46.1 bits (23), Expect = 0.005
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 92 gaacaaagtggctcagccccgtcgttttattatta 126
||||||| |||||||||||| |||||||||||||
Sbjct: 592 gaacaaacgggctcagccccggcgttttattatta 558
>gb|CD224094.1|CD224094 CCC1_32_C12.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_32_C12_A007 3', mRNA sequence
Length = 611
Score = 553 bits (279), Expect = e-156
Identities = 386/423 (91%)
Strand = Plus / Minus
Query: 245 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 304
||||||||||||||||||| || |||||||||| ||||||||||||||||||| ||||||
Sbjct: 431 cctagcaagtgaggttgggtccggggtcgacgccgagctgctggcagtactgcctgtagt 372
Query: 305 agccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttga 364
|||| || ||||||||||||||||| | || || |||||||||||||||||||||||||
Sbjct: 371 agcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttga 312
Query: 365 tggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccaga 424
|||||||||||||||||||||| ||||||| |||||| | |||||||||||| ||||||
Sbjct: 311 tggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttggtccaga 252
Query: 425 accagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcga 484
|||||||||||||||||||||||| ||||||||||||||||||||||| |||| |
Sbjct: 251 accagagcgccgtcttgaacgcgaccacggcgtcctgcgccaccctgtccgggttccgaa 192
Query: 485 gcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgca 544
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 191 gcccgtcgaagccgatgtccctcccggcaggcccgtagttgtagttccacgagatttgca 132
Query: 545 gcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcgt 604
||||||||||||||||||||||||| ||||| || |||||||||||||||||||||| ||
Sbjct: 131 gcgggccgcgcccgtagtacttctgacccgcggcacacggccactgcctgttgctcgagt 72
Query: 605 cgcagtaggcgttgctcttnttgatctcgctgatgtagcnnnaatgtccggtctcgtgcg 664
|||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 71 cgcagtaggcgttgttcttgttgatctcgctgatgtagcagaaatgtccggtctcgtgcg 12
Query: 665 tga 667
|||
Sbjct: 11 tga 9
Score = 46.1 bits (23), Expect = 0.005
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 92 gaacaaagtggctcagccccgtcgttttattatta 126
||||||| |||||||||||| |||||||||||||
Sbjct: 592 gaacaaacgggctcagccccggcgttttattatta 558
>gb|CD226332.1|CD226332 CCC1_45_F08.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_45_F08_A007 3', mRNA sequence
Length = 611
Score = 553 bits (279), Expect = e-156
Identities = 386/423 (91%)
Strand = Plus / Minus
Query: 245 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 304
||||||||||||||||||| || |||||||||| ||||||||||||||||||| ||||||
Sbjct: 431 cctagcaagtgaggttgggtccggggtcgacgccgagctgctggcagtactgcctgtagt 372
Query: 305 agccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttga 364
|||| || ||||||||||||||||| | || || |||||||||||||||||||||||||
Sbjct: 371 agcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttga 312
Query: 365 tggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccaga 424
|||||||||||||||||||||| ||||||| |||||| | |||||||||||| ||||||
Sbjct: 311 tggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttggtccaga 252
Query: 425 accagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcga 484
|||||||||||||||||||||||| ||||||||||||||||||||||| |||| |
Sbjct: 251 accagagcgccgtcttgaacgcgaccacggcgtcctgcgccaccctgtccgggttccgaa 192
Query: 485 gcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgca 544
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 191 gcccgtcgaagccgatgtccctcccggcaggcccgtagttgtagttccacgagatttgca 132
Query: 545 gcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcgt 604
||||||||||||||||||||||||| ||||| || |||||||||||||||||||||| ||
Sbjct: 131 gcgggccgcgcccgtagtacttctgacccgcggcacacggccactgcctgttgctcgagt 72
Query: 605 cgcagtaggcgttgctcttnttgatctcgctgatgtagcnnnaatgtccggtctcgtgcg 664
|||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 71 cgcagtaggcgttgttcttgttgatctcgctgatgtagcagaaatgtccggtctcgtgcg 12
Query: 665 tga 667
|||
Sbjct: 11 tga 9
Score = 46.1 bits (23), Expect = 0.005
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 92 gaacaaagtggctcagccccgtcgttttattatta 126
||||||| |||||||||||| |||||||||||||
Sbjct: 592 gaacaaacgggctcagccccggcgttttattatta 558
>gb|AW922735.1|AW922735 DG1_45_B06.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 645
Score = 549 bits (277), Expect = e-154
Identities = 369/400 (92%)
Strand = Plus / Minus
Query: 244 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 303
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 400 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 341
Query: 304 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 363
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 340 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 281
Query: 364 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 423
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 280 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 221
Query: 424 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 483
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 220 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggtttgcg 161
Query: 484 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 543
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 160 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 101
Query: 544 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcg 603
|||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||| |
Sbjct: 100 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgctcgag 41
Query: 604 tcgcagtaggcgttgctcttnttgatctcgctgatgtagc 643
|||||||| |||||| |||| |||||||||||||||||||
Sbjct: 40 tcgcagtaagcgttgttcttgttgatctcgctgatgtagc 1
Score = 58.0 bits (29), Expect = 1e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 177 taaactcttggtttcgcgagggtgcgacgccgagcat 213
|||||||| |||||||||||||||||||||||||||
Sbjct: 479 taaactctgtgtttcgcgagggtgcgacgccgagcat 443
>gb|BE363379.1|BE363379 WS1_62_C05.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 534
Score = 547 bits (276), Expect = e-154
Identities = 392/432 (90%)
Strand = Plus / Minus
Query: 245 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 304
|||| |||||||||||||| || |||||||||| ||||||||||||||||||| ||||||
Sbjct: 507 cctatcaagtgaggttgggtccggggtcgacgccgagctgctggcagtactgcctgtagt 448
Query: 305 agccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttga 364
|||| || ||||||||||||||||| | || || |||||||||||||||||||||||||
Sbjct: 447 agcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttga 388
Query: 365 tggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccaga 424
|||||||||||||||||||||| ||||||| |||||| | |||||||||||| ||||||
Sbjct: 387 tggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttggtccaga 328
Query: 425 accagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcga 484
|||||||||||||||||||||||| ||||||||||||||||||||||| |||| |
Sbjct: 327 accagagcgccgtcttgaacgcgaccacggcgtcctgcgccaccctgtccgggttccgaa 268
Query: 485 gcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgca 544
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 267 gcccgtcgaagccgatgtccctcccggcaggcccgtagttgtagttccacgagatttgca 208
Query: 545 gcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcgt 604
||||||||||||||||||||||||| ||||| || |||||||||||||||||||||| ||
Sbjct: 207 gcgggccgcgcccgtagtacttctgacccgcggcacacggccactgcctgttgctcgagt 148
Query: 605 cgcagtaggcgttgctcttnttgatctcgctgatgtagcnnnaatgtccggtctcgtgcg 664
|||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 147 cgcagtaggcgttgttcttgttgatctcgctgatgtagcagaaatgtccggtctcgtgcg 88
Query: 665 tgacgtgcgcga 676
||| ||| ||||
Sbjct: 87 tgatgtgggcga 76
>gb|CN132942.1|CN132942 OX1_9_D11.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_9_D11_A002 3', mRNA sequence
Length = 812
Score = 547 bits (276), Expect = e-154
Identities = 392/432 (90%)
Strand = Plus / Minus
Query: 245 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 304
||||||||||||||||||| || |||||||||| ||||||||||||||||||| ||||||
Sbjct: 624 cctagcaagtgaggttgggtccggggtcgacgccgagctgctggcagtactgcctgtagt 565
Query: 305 agccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttga 364
|||| || ||||||||||||||||| | || || |||||||||||||||||||||||||
Sbjct: 564 agcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttga 505
Query: 365 tggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccaga 424
|||||||||||||||||||||| ||||||| |||||| | |||||||||||| ||||||
Sbjct: 504 tggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttggtccaga 445
Query: 425 accagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcga 484
|||||||||||||||||||||||| ||||||||| ||||||||||||| |||| |
Sbjct: 444 accagagcgccgtcttgaacgcgaccacggcgtcttgcgccaccctgtccgggttccgaa 385
Query: 485 gcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgca 544
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 384 gcccgtcgaagccgatgtccctcccggcaggcccgtagttgtagttccacgagatttgca 325
Query: 545 gcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcgt 604
||||||||||||||||||||||||| ||||| || |||||||||||||||||||||| ||
Sbjct: 324 gcgggccgcgcccgtagtacttctgacccgcggcacacggccactgcctgttgctcgagt 265
Query: 605 cgcagtaggcgttgctcttnttgatctcgctgatgtagcnnnaatgtccggtctcgtgcg 664
|||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 264 cgcagtaggcgttgttcttgttgatctcgctgatgtagcagaaatgtccggtctcgtgcg 205
Query: 665 tgacgtgcgcga 676
||| ||| ||||
Sbjct: 204 tgatgtgggcga 193
Score = 46.1 bits (23), Expect = 0.005
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 92 gaacaaagtggctcagccccgtcgttttattatta 126
||||||| |||||||||||| |||||||||||||
Sbjct: 785 gaacaaacgggctcagccccggcgttttattatta 751
>gb|CL160722.1|CL160722 104_351_10805186_116_31825_242 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10805186, DNA
sequence
Length = 711
Score = 523 bits (264), Expect = e-147
Identities = 365/399 (91%)
Strand = Plus / Minus
Query: 245 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 304
||||||||||||||||||| || |||||||||| ||||||||||||||||||| ||||||
Sbjct: 567 cctagcaagtgaggttgggtccggggtcgacgccgagctgctggcagtactgcctgtagt 508
Query: 305 agccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttga 364
|||| || ||||||||||||||||| | || || |||||||||||||||||||||||||
Sbjct: 507 agcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttga 448
Query: 365 tggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccaga 424
|||||||||||||||||||||| ||||||| |||||| | |||||||||||| ||||||
Sbjct: 447 tggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttggtccaga 388
Query: 425 accagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcga 484
|||||||||||||||||||||||| ||||||||||||||||||||||| |||| |
Sbjct: 387 accagagcgccgtcttgaacgcgaccacggcgtcctgcgccaccctgtccgggttccgaa 328
Query: 485 gcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgca 544
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 327 gcccgtcgaagccgatgtccctcccggcaggcccgtagttgtagttccacgagatttgca 268
Query: 545 gcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcgt 604
||||||||||||||||||||||||| ||||| || |||||||||||||||||||||| ||
Sbjct: 267 gcgggccgcgcccgtagtacttctgacccgcggcacacggccactgcctgttgctcgagt 208
Query: 605 cgcagtaggcgttgctcttnttgatctcgctgatgtagc 643
|||||||||||||| |||| |||||||||||||||||||
Sbjct: 207 cgcagtaggcgttgttcttgttgatctcgctgatgtagc 169
>gb|CW365833.1|CW365833 fsbb001f038i18k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f038i18, DNA
sequence
Length = 831
Score = 523 bits (264), Expect = e-147
Identities = 365/399 (91%)
Strand = Plus / Minus
Query: 245 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 304
||||||||||||||||||| || |||||||||| ||||||||||||||||||| ||||||
Sbjct: 501 cctagcaagtgaggttgggtccggggtcgacgccgagctgctggcagtactgcctgtagt 442
Query: 305 agccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttga 364
|||| || ||||||||||||||||| | || || |||||||||||||||||||||||||
Sbjct: 441 agcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttga 382
Query: 365 tggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccaga 424
|||||||||||||||||||||| ||||||| |||||| | |||||||||||| ||||||
Sbjct: 381 tggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttggtccaga 322
Query: 425 accagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcga 484
|||||||||||||||||||||||| ||||||||||||||||||||||| |||| |
Sbjct: 321 accagagcgccgtcttgaacgcgaccacggcgtcctgcgccaccctgtccgggttccgaa 262
Query: 485 gcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgca 544
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 261 gcccgtcgaagccgatgtccctcccggcaggcccgtagttgtagttccacgagatttgca 202
Query: 545 gcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcgt 604
||||||||||||||||||||||||| ||||| || |||||||||||||||||||||| ||
Sbjct: 201 gcgggccgcgcccgtagtacttctgacccgcggcacacggccactgcctgttgctcgagt 142
Query: 605 cgcagtaggcgttgctcttnttgatctcgctgatgtagc 643
|||||||||||||| |||| |||||||||||||||||||
Sbjct: 141 cgcagtaggcgttgttcttgttgatctcgctgatgtagc 103
Score = 46.1 bits (23), Expect = 0.005
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 92 gaacaaagtggctcagccccgtcgttttattatta 126
||||||| |||||||||||| |||||||||||||
Sbjct: 662 gaacaaacgggctcagccccggcgttttattatta 628
>gb|AF402939.1|AF402939 Sorghum halepense chitinase-B gene, partial cds
Length = 922
Score = 521 bits (263), Expect = e-146
Identities = 364/398 (91%)
Strand = Plus / Minus
Query: 246 ctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagta 305
|||||| |||||||||||||| |||||||||| ||||||||||||||||||| |||||||
Sbjct: 922 ctagcaggtgaggttgggcccggggtcgacgccgagctgctggcagtactgcctgtagta 863
Query: 306 gccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttgat 365
||| || ||||| ||||||||||| | || |||||||||||||||||||||||||||||
Sbjct: 862 gcccacccgcgcattcatctgggcagtattcttcccgttgcactcgagggcgccgttgat 803
Query: 366 ggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccagaa 425
||| ||||||||||| ||||| ||||||| |||||| | |||||||||||| |||||||
Sbjct: 802 ggctctgatggtggcaccgaacccctgcgacatcaccccgtgcacgttgttggtccagaa 743
Query: 426 ccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcgag 485
||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 742 ccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgtccgggttccgaag 683
Query: 486 cccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgcag 545
||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 682 cccgtcgaagccgatgtccctcccggcaggcccgtagttgtagttccacgagatttgcag 623
Query: 546 cgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcgtc 605
|||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||
Sbjct: 622 cgggccgcgcccgtagtacttctgacccgcggcgcacggccactgcctgttgctcgagtc 563
Query: 606 gcagtaggcgttgctcttnttgatctcgctgatgtagc 643
||||||||||||| |||| |||||||||||||||||||
Sbjct: 562 gcagtaggcgttgttcttgttgatctcgctgatgtagc 525
Score = 46.1 bits (23), Expect = 0.005
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 650 gtccggtctcgtgcgtgacgtgcgcga 676
|||||||||||||||||||||| ||||
Sbjct: 382 gtccggtctcgtgcgtgacgtgggcga 356
>gb|BE918591.1|BE918591 OV1_8_G11.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 618
Score = 519 bits (262), Expect = e-145
Identities = 368/405 (90%)
Strand = Plus / Minus
Query: 272 cgacgcggagctgctggcagtactgcttgtagtagccgacgcgcgcgttcatctgggcgg 331
|||||| ||||||||||||||||||| |||||||||| || ||||||||||||||||| |
Sbjct: 618 cgacgccgagctgctggcagtactgcntgtagtagcccacccgcgcgttcatctgggcag 559
Query: 332 ggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagccct 391
|| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 558 tattcttgccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaacccct 499
Query: 392 gcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcgatca 451
||| |||||| | |||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 498 gcgacatcaccccgtgcacgttgttggtccagaaccagagcgccgtcttgaacgcgacca 439
Query: 452 cggcgtcctgcgccaccctgttggggtcggcgagcccgttgaagccgatgtccctcccgg 511
||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||
Sbjct: 438 cggcgtcctgcgccaccctgtccgggttccgaagcccgtcgaagccgatgtccctcccgg 379
Query: 512 cgggcccgtagttgtagttccacgagatctgcagcgggccgcgcccgtagtacttctgcc 571
| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 378 caggcccgtagttgtagttccacgagatttgcagcgggccgcgcccgtagtacttctgac 319
Query: 572 ccgccgcgcacggccactgcctgttgctcgcgtcgcagtaggcgttgctcttnttgatct 631
|||| || |||||||||||||||||||||| |||||||||||||||| |||| |||||||
Sbjct: 318 ccgcggcacacggccactgcctgttgctcgagtcgcagtaggcgttgttcttgttgatct 259
Query: 632 cgctgatgtagcnnnaatgtccggtctcgtgcgtgacgtgcgcga 676
|||||||||||| ||||||||||||||||||||| ||| ||||
Sbjct: 258 cgctgatgtagcagaaatgtccggtctcgtgcgtgatgtgggcga 214
>gb|CD226807.1|CD226807 CCC1_48_C11.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_48_C11_A007 3', mRNA sequence
Length = 598
Score = 513 bits (259), Expect = e-144
Identities = 360/394 (91%)
Strand = Plus / Minus
Query: 245 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 304
||||||||||||||||||| || |||||||||| ||||||||||||||||||| ||||||
Sbjct: 394 cctagcaagtgaggttgggtccggggtcgacgccgagctgctggcagtactgcctgtagt 335
Query: 305 agccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttga 364
|||| || ||||||||||||||||| | || || |||||||||||||||||||||||||
Sbjct: 334 agcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttga 275
Query: 365 tggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccaga 424
|||||||||||||||||||||| ||||||| |||||| | |||||||||||| ||||||
Sbjct: 274 tggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttggtccaga 215
Query: 425 accagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcga 484
|||||||||||||||||||||||| ||||||||||||||||||||||| |||| |
Sbjct: 214 accagagcgccgtcttgaacgcgaccacggcgtcctgcgccaccctgtccgggttccgaa 155
Query: 485 gcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgca 544
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 154 gcccgtcgaagccgatgtccctcccggcaggcccgtagttgtagttccacgagatttgca 95
Query: 545 gcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcgt 604
||||||||||||||||||||||||| ||||| || |||||||||||||||||||||| ||
Sbjct: 94 gcgggccgcgcccgtagtacttctgacccgcggcacacggccactgcctgttgctcgagt 35
Query: 605 cgcagtaggcgttgctcttnttgatctcgctgat 638
|||||||||||||| |||| ||||||||||||||
Sbjct: 34 cgcagtaggcgttgttcttgttgatctcgctgat 1
Score = 46.1 bits (23), Expect = 0.005
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 92 gaacaaagtggctcagccccgtcgttttattatta 126
||||||| |||||||||||| |||||||||||||
Sbjct: 555 gaacaaacgggctcagccccggcgttttattatta 521
>gb|AF402938.1|AF402938 Sorghum arundinaceum chitinase-B gene, partial cds
Length = 922
Score = 513 bits (259), Expect = e-144
Identities = 363/398 (91%)
Strand = Plus / Minus
Query: 246 ctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagta 305
|||||| |||||||||||||| |||||||||| ||||||| |||||||||||||||||||
Sbjct: 922 ctagcaggtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtagta 863
Query: 306 gccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttgat 365
||| || ||||||||||||||||| | || |||||||||||||||||||||||||||||
Sbjct: 862 gcccacccgcgcgttcatctgggcagtattcttcccgttgcactcgagggcgccgttgat 803
Query: 366 ggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccagaa 425
||||||||||||||||||||| ||||||| |||||| | ||||||||||||| ||||| |
Sbjct: 802 ggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccagta 743
Query: 426 ccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcgag 485
||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||
Sbjct: 742 ccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcgag 683
Query: 486 cccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgcag 545
|||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||||
Sbjct: 682 cccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgcag 623
Query: 546 cgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcgtc 605
||||||||| |||||||||||||| ||||| ||||||||||||||| | ||||||| |||
Sbjct: 622 cgggccgcgtccgtagtacttctgtcccgcggcgcacggccactgcgtcttgctcgtgtc 563
Query: 606 gcagtaggcgttgctcttnttgatctcgctgatgtagc 643
||||||| || | |||| |||||||||||||||||||
Sbjct: 562 acagtaggggtcgttcttgttgatctcgctgatgtagc 525
>gb|AW746695.1|AW746695 WS1_54_E02.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 575
Score = 511 bits (258), Expect = e-143
Identities = 342/370 (92%)
Strand = Plus / Minus
Query: 244 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 303
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 370 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 311
Query: 304 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 363
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 310 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 251
Query: 364 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 423
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 250 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 191
Query: 424 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 483
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 190 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 131
Query: 484 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 543
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 130 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 71
Query: 544 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcg 603
|||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||| |
Sbjct: 70 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgctcgag 11
Query: 604 tcgcagtagg 613
||||||||||
Sbjct: 10 tcgcagtagg 1
Score = 58.0 bits (29), Expect = 1e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 177 taaactcttggtttcgcgagggtgcgacgccgagcat 213
|||||||| |||||||||||||||||||||||||||
Sbjct: 449 taaactctgtgtttcgcgagggtgcgacgccgagcat 413
>gb|BG101749.1|BG101749 EM1_5_G10.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 519
Score = 511 bits (258), Expect = e-143
Identities = 350/382 (91%)
Strand = Plus / Minus
Query: 287 ggcagtactgcttgtagtagccgacgcgcgcgttcatctgggcggggttgttcccgttgc 346
|||||||||||||||||||||| || ||||||||||||||||| | || || |||||||
Sbjct: 519 ggcagtactgcttgtagtagcccacccgcgcgttcatctgggcagtattcttgccgttgc 460
Query: 347 actcgagggcgccgttgatggccctgatggtggcgccgaagccctgcggcatcacacggt 406
|||||||||||||||||||||||||||||||||||||||| ||||||| |||||| | ||
Sbjct: 459 actcgagggcgccgttgatggccctgatggtggcgccgaacccctgcgacatcaccccgt 400
Query: 407 gcacgttgttcatccagaaccagagcgccgtcttgaacgcgatcacggcgtcctgcgcca 466
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gcacgttgttcgtccagtaccagagcgccgtcttgaacgcgatcacggcgtcctgcgcca 340
Query: 467 ccctgttggggtcggcgagcccgttgaagccgatgtccctcccggcgggcccgtagttgt 526
|| |||| |||| ||||||||||||||||||||| || ||||||| |||||||||||||
Sbjct: 339 ccttgttcgggttcgcgagcccgttgaagccgatggccttcccggcaggcccgtagttgt 280
Query: 527 agttccacgagatctgcagcgggccgcgcccgtagtacttctgccccgccgcgcacggcc 586
||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 279 agttccacgagatttgcagcgggccgcgcccgtagtacttctgtcccgcggcgcacggcc 220
Query: 587 actgcctgttgctcgcgtcgcagtaggcgttgctcttnttgatctcgctgatgtagcnnn 646
||||| ||||||||| |||||||||||||||| |||| |||||||||||||||||||
Sbjct: 219 actgcttgttgctcgagtcgcagtaggcgttgttcttgttgatctcgctgatgtagcaga 160
Query: 647 aatgtccggtctcgtgcgtgac 668
|||| ||||||||||| |||||
Sbjct: 159 aatgcccggtctcgtgggtgac 138
>gb|CN133023.1|CN133023 OX1_9_D11.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_9_D11_A002 5', mRNA sequence
Length = 837
Score = 505 bits (255), Expect = e-141
Identities = 365/403 (90%)
Strand = Plus / Minus
Query: 274 acgcggagctgctggcagtactgcttgtagtagccgacgcgcgcgttcatctgggcgggg 333
|||| ||||||||||||||||||| |||||||||| || ||||||||||||||||| |
Sbjct: 837 acgccgagctgctggcagtactgcctgtagtagcccacccgcgcgttcatctgggcagta 778
Query: 334 ttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagccctgc 393
|| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 777 ttcttgccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaacccctgc 718
Query: 394 ggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcgatcacg 453
| |||||| | |||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 717 gacatcaccccgtgcacgttgttggtccagaaccagagcgccgtcttgaacgcgaccacg 658
Query: 454 gcgtcctgcgccaccctgttggggtcggcgagcccgttgaagccgatgtccctcccggcg 513
||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||
Sbjct: 657 gcgtcttgcgccaccctgtccgggttccgaagcccgtcgaagccgatgtccctcccggca 598
Query: 514 ggcccgtagttgtagttccacgagatctgcagcgggccgcgcccgtagtacttctgcccc 573
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 597 ggcccgtagttgtagttccacgagatttgcagcgggccgcgcccgtagtacttctgaccc 538
Query: 574 gccgcgcacggccactgcctgttgctcgcgtcgcagtaggcgttgctcttnttgatctcg 633
|| || |||||||||||||||||||||| |||||||||||||||| |||| |||||||||
Sbjct: 537 gcggcacacggccactgcctgttgctcgagtcgcagtaggcgttgttcttgttgatctcg 478
Query: 634 ctgatgtagcnnnaatgtccggtctcgtgcgtgacgtgcgcga 676
|||||||||| ||||||||||||||||||||| ||| ||||
Sbjct: 477 ctgatgtagcagaaatgtccggtctcgtgcgtgatgtgggcga 435
>gb|CD228493.1|CD228493 CCC1_8_E11.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_8_E11_A007 3', mRNA sequence
Length = 591
Score = 500 bits (252), Expect = e-139
Identities = 353/387 (91%)
Strand = Plus / Minus
Query: 245 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 304
||||||||||||||||||| || |||||||||| ||||||||||||||||||| ||||||
Sbjct: 387 cctagcaagtgaggttgggtccggggtcgacgccgagctgctggcagtactgcctgtagt 328
Query: 305 agccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttga 364
|||| || ||||||||||||||||| | || || |||||||||||||||||||||||||
Sbjct: 327 agcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttga 268
Query: 365 tggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccaga 424
|||||||||||||||||||||| ||||||| |||||| | |||||||||||| ||||||
Sbjct: 267 tggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttggtccaga 208
Query: 425 accagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcga 484
|||||||||||||||||||||||| ||||||||||||||||||||||| |||| |
Sbjct: 207 accagagcgccgtcttgaacgcgaccacggcgtcctgcgccaccctgtccgggttccgaa 148
Query: 485 gcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgca 544
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 147 gcccgtcgaagccgatgtccctcccggcaggcccgtagttgtagttccacgagatttgca 88
Query: 545 gcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcgt 604
||||||||||||||||||||||||| ||||| || |||||||||||||||||||||| ||
Sbjct: 87 gcgggccgcgcccgtagtacttctgacccgcggcacacggccactgcctgttgctcgagt 28
Query: 605 cgcagtaggcgttgctcttnttgatct 631
|||||||||||||| |||| |||||||
Sbjct: 27 cgcagtaggcgttgttcttgttgatct 1
Score = 46.1 bits (23), Expect = 0.005
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 92 gaacaaagtggctcagccccgtcgttttattatta 126
||||||| |||||||||||| |||||||||||||
Sbjct: 548 gaacaaacgggctcagccccggcgttttattatta 514
>gb|AY048375.1| Sorghum bicolor chitinase-B gene, partial cds
Length = 927
Score = 498 bits (251), Expect = e-139
Identities = 361/398 (90%)
Strand = Plus / Minus
Query: 246 ctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagta 305
|||||| |||||||||||||| |||||||||| ||||||| |||||||||||||||||||
Sbjct: 927 ctagcaggtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtagta 868
Query: 306 gccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttgat 365
||| || ||||||||||||||||| | || || ||||||||||||||||||||||||||
Sbjct: 867 gcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttgat 808
Query: 366 ggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccagaa 425
||||||||||||||||||||| ||||||| |||||| | ||||||||||||| ||||| |
Sbjct: 807 ggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccagta 748
Query: 426 ccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcgag 485
||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||
Sbjct: 747 ccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcgag 688
Query: 486 cccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgcag 545
|||||||||||||||| || ||||||| |||||||||||||||| |||||| || | |||
Sbjct: 687 cccgttgaagccgatgcccttcccggcaggcccgtagttgtagtcccacgaaattttcag 628
Query: 546 cgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcgtc 605
||||||||| |||||||||||||| ||||| ||||||||||||||| | ||||||| |||
Sbjct: 627 cgggccgcgtccgtagtacttctgtcccgcggcgcacggccactgcgtcttgctcgagtc 568
Query: 606 gcagtaggcgttgctcttnttgatctcgctgatgtagc 643
||||||||||| | |||| |||||||||||||||||||
Sbjct: 567 gcagtaggcgtcgttcttgttgatctcgctgatgtagc 530
>gb|CW302450.1|CW302450 104_786_11464725_116_35662_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11464725, DNA
sequence
Length = 642
Score = 496 bits (250), Expect = e-138
Identities = 344/376 (91%)
Strand = Plus / Minus
Query: 268 gggtcgacgcggagctgctggcagtactgcttgtagtagccgacgcgcgcgttcatctgg 327
|||||||||| ||||||||||||||||||| |||||||||| || |||||||||||||||
Sbjct: 642 gggtcgacgccgagctgctggcagtactgcctgtagtagcccacccgcgcgttcatctgg 583
Query: 328 gcggggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaag 387
|| | || || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 gcagtattcttgccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaac 523
Query: 388 ccctgcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcg 447
||||||| |||||| | |||||||||||| |||||||||||||||||||||||||||||
Sbjct: 522 ccctgcgacatcacnccgtgcacgttgttggtccagaaccagagcgccgtcttgaacgcg 463
Query: 448 atcacggcgtcctgcgccaccctgttggggtcggcgagcccgttgaagccgatgtccctc 507
| ||||||||||||||||||||||| |||| ||||||| ||||||||||||||||
Sbjct: 462 accacggcgtcctgcgccaccctgtccgggttccgaagcccgtcgaagccgatgtccctc 403
Query: 508 ccggcgggcccgtagttgtagttccacgagatctgcagcgggccgcgcccgtagtacttc 567
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 402 ccggcaggcccgtagttgtagttccacgagatttgcagcgggccgcgcccgtagtacttc 343
Query: 568 tgccccgccgcgcacggccactgcctgttgctcgcgtcgcagtaggcgttgctcttnttg 627
|| ||||| || |||||||||||||||||||||| |||||||||||||||| |||| |||
Sbjct: 342 tgacccgcggcacacggccactgcctgttgctcgagtcgcagtaggcgttgttcttgttg 283
Query: 628 atctcgctgatgtagc 643
||||||||||||||||
Sbjct: 282 atctcgctgatgtagc 267
>gb|BG556500.1|BG556500 EM1_37_H12.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 441
Score = 494 bits (249), Expect = e-138
Identities = 330/357 (92%)
Strand = Plus / Minus
Query: 244 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 303
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 357 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 298
Query: 304 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 363
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 297 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 238
Query: 364 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 423
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 237 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 178
Query: 424 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 483
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 177 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 118
Query: 484 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 543
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 117 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 58
Query: 544 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctc 600
|||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||
Sbjct: 57 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgctc 1
Score = 58.0 bits (29), Expect = 1e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 177 taaactcttggtttcgcgagggtgcgacgccgagcat 213
|||||||| |||||||||||||||||||||||||||
Sbjct: 436 taaactctgtgtttcgcgagggtgcgacgccgagcat 400
>gb|CD223269.1|CD223269 CCC1_27_E04.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_27_E04_A007 3', mRNA sequence
Length = 605
Score = 492 bits (248), Expect = e-137
Identities = 329/356 (92%)
Strand = Plus / Minus
Query: 244 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 303
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 356 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 297
Query: 304 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 363
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 296 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 237
Query: 364 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 423
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 236 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 177
Query: 424 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 483
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 176 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 117
Query: 484 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 543
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 116 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 57
Query: 544 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgct 599
|||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||
Sbjct: 56 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgct 1
Score = 58.0 bits (29), Expect = 1e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 177 taaactcttggtttcgcgagggtgcgacgccgagcat 213
|||||||| |||||||||||||||||||||||||||
Sbjct: 435 taaactctgtgtttcgcgagggtgcgacgccgagcat 399
>gb|CD227859.1|CD227859 CCC1_56_F04.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_56_F04_A007 3', mRNA sequence
Length = 622
Score = 492 bits (248), Expect = e-137
Identities = 329/356 (92%)
Strand = Plus / Minus
Query: 244 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 303
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 356 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 297
Query: 304 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 363
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 296 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 237
Query: 364 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 423
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 236 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 177
Query: 424 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 483
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 176 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 117
Query: 484 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 543
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 116 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 57
Query: 544 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgct 599
|||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||
Sbjct: 56 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgct 1
Score = 58.0 bits (29), Expect = 1e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 177 taaactcttggtttcgcgagggtgcgacgccgagcat 213
|||||||| |||||||||||||||||||||||||||
Sbjct: 435 taaactctgtgtttcgcgagggtgcgacgccgagcat 399
>gb|CD228687.1|CD228687 CCC1_9_D03.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_9_D03_A007 3', mRNA sequence
Length = 621
Score = 492 bits (248), Expect = e-137
Identities = 329/356 (92%)
Strand = Plus / Minus
Query: 244 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 303
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 356 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 297
Query: 304 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 363
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 296 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 237
Query: 364 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 423
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 236 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 177
Query: 424 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 483
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 176 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 117
Query: 484 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 543
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 116 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 57
Query: 544 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgct 599
|||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||
Sbjct: 56 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgct 1
Score = 58.0 bits (29), Expect = 1e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 177 taaactcttggtttcgcgagggtgcgacgccgagcat 213
|||||||| |||||||||||||||||||||||||||
Sbjct: 435 taaactctgtgtttcgcgagggtgcgacgccgagcat 399
>gb|CD220455.1|CD220455 CCC1_67_F06.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_67_F06_A007 3', mRNA sequence
Length = 594
Score = 490 bits (247), Expect = e-136
Identities = 334/363 (92%)
Strand = Plus / Minus
Query: 244 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 303
||||| ||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 363 gcctaacaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 304
Query: 304 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 363
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 303 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 244
Query: 364 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 423
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 243 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 184
Query: 424 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 483
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 183 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 124
Query: 484 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 543
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 123 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 64
Query: 544 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcg 603
|||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||| |
Sbjct: 63 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgctcgag 4
Query: 604 tcg 606
|||
Sbjct: 3 tcg 1
Score = 50.1 bits (25), Expect = 3e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 177 taaactcttggtttcgcgagggtgcgacgccgagcat 213
|||||||| ||||||||||||||||||||| |||||
Sbjct: 442 taaactctgtgtttcgcgagggtgcgacgcccagcat 406
>gb|CD225586.1|CD225586 CCC1_40_H10.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_40_H10_A007 3', mRNA sequence
Length = 526
Score = 488 bits (246), Expect = e-136
Identities = 330/358 (92%)
Strand = Plus / Minus
Query: 244 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 303
|||||||||| |||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 358 gcctagcaagcgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 299
Query: 304 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 363
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 298 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 239
Query: 364 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 423
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 238 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 179
Query: 424 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 483
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 178 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 119
Query: 484 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 543
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 118 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 59
Query: 544 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcg 601
|||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||
Sbjct: 58 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgctcg 1
Score = 58.0 bits (29), Expect = 1e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 177 taaactcttggtttcgcgagggtgcgacgccgagcat 213
|||||||| |||||||||||||||||||||||||||
Sbjct: 437 taaactctgtgtttcgcgagggtgcgacgccgagcat 401
>gb|CD222930.1|CD222930 CCC1_25_F06.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_25_F06_A007 3', mRNA sequence
Length = 612
Score = 486 bits (245), Expect = e-135
Identities = 336/365 (92%), Gaps = 1/365 (0%)
Strand = Plus / Minus
Query: 244 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 303
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 364 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 305
Query: 304 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 363
||||| || ||||||||||||||||| | || || |||||||||||| |||||||||||
Sbjct: 304 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcg-gggcgccgttg 246
Query: 364 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 423
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 245 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 186
Query: 424 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 483
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 185 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 126
Query: 484 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 543
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 125 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 66
Query: 544 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcg 603
|||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||| |
Sbjct: 65 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgctcgag 6
Query: 604 tcgca 608
|||||
Sbjct: 5 tcgca 1
Score = 58.0 bits (29), Expect = 1e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 177 taaactcttggtttcgcgagggtgcgacgccgagcat 213
|||||||| |||||||||||||||||||||||||||
Sbjct: 443 taaactctgtgtttcgcgagggtgcgacgccgagcat 407
>gb|CW098317.1|CW098317 104_464_11002941_148_34366_083 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11002941, DNA
sequence
Length = 422
Score = 484 bits (244), Expect = e-135
Identities = 322/348 (92%)
Strand = Plus / Plus
Query: 244 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 303
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 75 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 134
Query: 304 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 363
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 135 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 194
Query: 364 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 423
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 195 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 254
Query: 424 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 483
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 255 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 314
Query: 484 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 543
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 315 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 374
Query: 544 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgc 591
|||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 375 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgc 422
Score = 54.0 bits (27), Expect = 2e-005
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 187 gtttcgcgagggtgcgacgccgagcat 213
|||||||||||||||||||||||||||
Sbjct: 6 gtttcgcgagggtgcgacgccgagcat 32
>gb|AW745819.1|AW745819 WS1_37_H11.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 590
Score = 484 bits (244), Expect = e-135
Identities = 360/399 (90%)
Strand = Plus / Minus
Query: 245 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 304
||||||||||||||||||| || |||||||||| ||||||||||||||||||| ||||||
Sbjct: 406 cctagcaagtgaggttgggtccggggtcgacgccgagctgctggcagtactgcctgtagt 347
Query: 305 agccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttga 364
| || || ||||||||||||||||| | || || |||||||||||||||||||||||||
Sbjct: 346 aacccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttga 287
Query: 365 tggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccaga 424
|||||||||||||||||||||| ||||||| |||||| | |||||||||||| ||||||
Sbjct: 286 tggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttggtccaga 227
Query: 425 accagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcga 484
|||| ||||||| |||||||||| ||||||||||||||||||||||| |||| |
Sbjct: 226 accaaagcgccgggttgaacgcgaccacggcgtcctgcgccaccctgtccgggttccgaa 167
Query: 485 gcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgca 544
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 166 gcccgtcgaagccgatgtccctcccggcaggcccgtagttgtagttccacgagatttgca 107
Query: 545 gcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcgt 604
|||||||| |||||||||||||||| ||||| || |||||||||||||||||||||| ||
Sbjct: 106 gcgggccgggcccgtagtacttctgacccgcggcacacggccactgcctgttgctcgagt 47
Query: 605 cgcagtaggcgttgctcttnttgatctcgctgatgtagc 643
||||||||||||||||||| ||||||||||||||||||
Sbjct: 46 cgcagtaggcgttgctcttggtgatctcgctgatgtagc 8
Score = 46.1 bits (23), Expect = 0.005
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 92 gaacaaagtggctcagccccgtcgttttattatta 126
||||||| |||||||||||| |||||||||||||
Sbjct: 567 gaacaaacgggctcagccccggcgttttattatta 533
>gb|CD221392.1|CD221392 CCC1_54_C04.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_54_C04_A007 3', mRNA sequence
Length = 622
Score = 484 bits (244), Expect = e-135
Identities = 328/356 (92%)
Strand = Plus / Minus
Query: 244 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 303
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 356 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 297
Query: 304 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 363
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 296 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 237
Query: 364 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 423
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 236 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 177
Query: 424 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 483
||||||||||||||||||||| |||||||||||||||||||||| |||| |||| |||
Sbjct: 176 taccagagcgccgtcttgaacgtgatcacggcgtcctgcgccaccttgttcgggttcgcg 117
Query: 484 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 543
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 116 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 57
Query: 544 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgct 599
|||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||
Sbjct: 56 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgct 1
Score = 58.0 bits (29), Expect = 1e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 177 taaactcttggtttcgcgagggtgcgacgccgagcat 213
|||||||| |||||||||||||||||||||||||||
Sbjct: 435 taaactctgtgtttcgcgagggtgcgacgccgagcat 399
>gb|CD224145.1|CD224145 CCC1_32_A09.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_32_A09_A007 3', mRNA sequence
Length = 622
Score = 484 bits (244), Expect = e-135
Identities = 322/348 (92%)
Strand = Plus / Minus
Query: 244 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 303
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 356 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 297
Query: 304 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 363
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 296 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 237
Query: 364 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 423
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 236 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 177
Query: 424 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 483
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 176 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 117
Query: 484 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 543
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 116 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 57
Query: 544 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgc 591
|||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 56 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgc 9
Score = 50.1 bits (25), Expect = 3e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 177 taaactcttggtttcgcgagggtgcgacgccgagcat 213
|||||||| ||||||||||||||||||||| |||||
Sbjct: 435 taaactctgtgtttcgcgagggtgcgacgcccagcat 399
>gb|CD226496.1|CD226496 CCC1_46_E08.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_46_E08_A007 3', mRNA sequence
Length = 617
Score = 484 bits (244), Expect = e-135
Identities = 328/356 (92%)
Strand = Plus / Minus
Query: 244 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 303
||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||
Sbjct: 356 gcctagcaagtgaggttgggcccggggtcgacgcccagctgccggcagtactgcttgtag 297
Query: 304 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 363
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 296 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 237
Query: 364 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 423
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 236 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 177
Query: 424 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 483
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 176 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 117
Query: 484 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 543
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 116 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 57
Query: 544 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgct 599
|||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||
Sbjct: 56 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgct 1
Score = 58.0 bits (29), Expect = 1e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 177 taaactcttggtttcgcgagggtgcgacgccgagcat 213
|||||||| |||||||||||||||||||||||||||
Sbjct: 435 taaactctgtgtttcgcgagggtgcgacgccgagcat 399
>gb|CD228140.1|CD228140 CCC1_6_E03.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_6_E03_A007 3', mRNA sequence
Length = 586
Score = 484 bits (244), Expect = e-135
Identities = 328/356 (92%)
Strand = Plus / Minus
Query: 244 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 303
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 356 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 297
Query: 304 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 363
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 296 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 237
Query: 364 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 423
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 236 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 177
Query: 424 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 483
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 176 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 117
Query: 484 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 543
|||||||||||||| ||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 116 agcccgttgaagccaatggccttcccggcaggcccgtagttgtagttccacgagatttgc 57
Query: 544 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgct 599
|||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||
Sbjct: 56 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgct 1
Score = 58.0 bits (29), Expect = 1e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 177 taaactcttggtttcgcgagggtgcgacgccgagcat 213
|||||||| |||||||||||||||||||||||||||
Sbjct: 435 taaactctgtgtttcgcgagggtgcgacgccgagcat 399
>gb|CD229477.1|CD229477 CCC1_16_C07.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_16_C07_A007 3', mRNA sequence
Length = 622
Score = 476 bits (240), Expect = e-132
Identities = 327/356 (91%)
Strand = Plus / Minus
Query: 244 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 303
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 356 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 297
Query: 304 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 363
||||| || ||||||||||||||||| | || || ||| ||||||||||||||||||||
Sbjct: 296 tagcccacccgcgcgttcatctgggcagtattcttgccgatgcactcgagggcgccgttg 237
Query: 364 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 423
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 236 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 177
Query: 424 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 483
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 176 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 117
Query: 484 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 543
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 116 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 57
Query: 544 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgct 599
|||||||||||||||||||||||||| ||||| |||||||| |||||| |||||||
Sbjct: 56 agcgggccgcgcccgtagtacttctgtcccgcggcgcacgggcactgcttgttgct 1
Score = 50.1 bits (25), Expect = 3e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 177 taaactcttggtttcgcgagggtgcgacgccgagcat 213
|||||||| ||||||||||||||||||||| |||||
Sbjct: 435 taaactctgtgtttcgcgagggtgcgacgcccagcat 399
>gb|AW924422.1|AW924422 WS1_69_C06.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 511
Score = 462 bits (233), Expect = e-128
Identities = 304/329 (92%)
Strand = Plus / Minus
Query: 340 ccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagccctgcggcatc 399
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 502 ccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaacccctgcgacatc 443
Query: 400 acacggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcgatcacggcgtcc 459
|| | ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 442 accccgtgcacgttgttcgtccagtaccagagcgccgtcttgaacgcgatcacggcgtcc 383
Query: 460 tgcgccaccctgttggggtcggcgagcccgttgaagccgatgtccctcccggcgggcccg 519
||||||||| |||| |||| ||||||||||||||||||||| || ||||||| ||||||
Sbjct: 382 tgcgccaccttgttcgggttcgcgagcccgttgaagccgatggccttcccggcaggcccg 323
Query: 520 tagttgtagttccacgagatctgcagcgggccgcgcccgtagtacttctgccccgccgcg 579
|||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||
Sbjct: 322 tagttgtagttccacgagatttgcagcgggccgcgcccgtagtacttctgtcccgcggcg 263
Query: 580 cacggccactgcctgttgctcgcgtcgcagtaggcgttgctcttnttgatctcgctgatg 639
|||||||||||| ||||||||| |||||||||||||||| |||| |||||||||||||||
Sbjct: 262 cacggccactgcttgttgctcgagtcgcagtaggcgttgttcttgttgatctcgctgatg 203
Query: 640 tagcnnnaatgtccggtctcgtgcgtgac 668
|||| |||| ||||||||||| |||||
Sbjct: 202 tagcagaaatgcccggtctcgtgggtgac 174
>gb|CD432114.1|CD432114 ETH1_26_H07.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_26_H07_A002 3', mRNA sequence
Length = 566
Score = 458 bits (231), Expect = e-127
Identities = 324/355 (91%)
Strand = Plus / Minus
Query: 245 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 304
||||||||||||||||||| || |||||||||| ||||||||||||||||||| ||||||
Sbjct: 355 cctagcaagtgaggttgggtccggggtcgacgccgagctgctggcagtactgcctgtagt 296
Query: 305 agccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttga 364
|||| || ||||||||||||||||| | || || |||||||||||||||||||||||||
Sbjct: 295 agcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttga 236
Query: 365 tggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccaga 424
|||||||||||||||||||||| ||||||| |||||| | |||||||||||| ||||||
Sbjct: 235 tggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttggtccaga 176
Query: 425 accagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcga 484
|||||||||||||||||||||||| ||||||||||||||||||||||| |||| |
Sbjct: 175 accagagcgccgtcttgaacgcgaccacggcgtcctgcgccaccctgtccgggttccgaa 116
Query: 485 gcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgca 544
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 115 gcccgtcgaagccgatgtccctcccggcaggcccgtagttgtagttccacgagatttgca 56
Query: 545 gcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgct 599
||||||||||||||||||||||||| ||||| || ||||||||||||||||||||
Sbjct: 55 gcgggccgcgcccgtagtacttctgacccgcggcacacggccactgcctgttgct 1
Score = 46.1 bits (23), Expect = 0.005
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 92 gaacaaagtggctcagccccgtcgttttattatta 126
||||||| |||||||||||| |||||||||||||
Sbjct: 516 gaacaaacgggctcagccccggcgttttattatta 482
>gb|CD229267.1|CD229267 CCC1_14_D09.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_14_D09_A007 3', mRNA sequence
Length = 670
Score = 454 bits (229), Expect = e-126
Identities = 310/337 (91%)
Strand = Plus / Minus
Query: 244 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 303
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 337 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 278
Query: 304 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 363
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 277 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 218
Query: 364 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 423
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 217 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 158
Query: 424 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 483
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 157 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 98
Query: 484 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 543
|||||||||||||||||| || ||||||| ||||||||||||||| |||||||||| |||
Sbjct: 97 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagctccacgagatttgc 38
Query: 544 agcgggccgcgcccgtagtacttctgccccgccgcgc 580
|||||||||||||||||||||||||| ||||| ||||
Sbjct: 37 agcgggccgcgcccgtagtacttctgtcccgcggcgc 1
Score = 58.0 bits (29), Expect = 1e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 177 taaactcttggtttcgcgagggtgcgacgccgagcat 213
|||||||| |||||||||||||||||||||||||||
Sbjct: 416 taaactctgtgtttcgcgagggtgcgacgccgagcat 380
>gb|CW275250.1|CW275250 104_748_11404861_148_35382_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11404861, DNA
sequence
Length = 627
Score = 446 bits (225), Expect = e-123
Identities = 338/376 (89%)
Strand = Plus / Plus
Query: 268 gggtcgacgcggagctgctggcagtactgcttgtagtagccgacgcgcgcgttcatctgg 327
|||||||||| || ||||||||||||||||||||||||||| || ||||||||||| ||
Sbjct: 50 gggtcgacgccgaactgctggcagtactgcttgtagtagcccacccgcgcgttcatttgc 109
Query: 328 gcggggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaag 387
|| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 110 gcagggttgtttccgttgcactcgagggcgccgtcgatggccctgatggtggcgccgaac 169
Query: 388 ccctgcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcg 447
|| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 ccttgcggcatcaccccgtgcacgttgttcatccagaaccagagcgccgtcttgaacgcg 229
Query: 448 atcacggcgtcctgcgccaccctgttggggtcggcgagcccgttgaagccgatgtccctc 507
||||||| ||||||||||||| ||| |||| ||||||||| ||||||||| ||||||
Sbjct: 230 atcacggggtcctgcgccaccatgtccgggttcccgagcccgtcgaagccgatctccctc 289
Query: 508 ccggcgggcccgtagttgtagttccacgagatctgcagcgggccgcgcccgtagtacttc 567
||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ccggcaggaccgtagttgtagttccacgagatctgcagcgggccgcgcccgtagtacttc 349
Query: 568 tgccccgccgcgcacggccactgcctgttgctcgcgtcgcagtaggcgttgctcttnttg 627
| ||||| ||||||||||| || |||||||| || |||||||||| || ||| |||
Sbjct: 350 ttccccggggcgcacggccattgtgcgttgctcgagttgcagtaggcgctgttctcgttg 409
Query: 628 atctcgctgatgtagc 643
|||||||| |||||||
Sbjct: 410 atctcgcttatgtagc 425
Score = 46.1 bits (23), Expect = 0.005
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 654 ggtctcgtgcgtgacgtgcgcga 676
|||||||||||||||||||||||
Sbjct: 524 ggtctcgtgcgtgacgtgcgcga 546
>gb|CW088904.1|CW088904 104_434_10948392_114_32602_096 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10948392, DNA
sequence
Length = 617
Score = 442 bits (223), Expect = e-122
Identities = 282/302 (93%)
Strand = Plus / Minus
Query: 342 gttgcactcgagggcgccgttgatggccctgatggtggcgccgaagccctgcggcatcac 401
||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 617 gttgcactcgagggcgccgttgatggccctgatggtggcgccgaacccctgcgacatcac 558
Query: 402 acggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcgatcacggcgtcctg 461
| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 557 cccgtgcacgttgttcgtccagtaccagagcgccgtcttgaacgcgatcacggcgtcctg 498
Query: 462 cgccaccctgttggggtcggcgagcccgttgaagccgatgtccctcccggcgggcccgta 521
||||||| |||| |||| ||||||||||||||||||||| || ||||||| ||||||||
Sbjct: 497 cgccaccttgttcgggttcgcgagcccgttgaagccgatggccttcccggcaggcccgta 438
Query: 522 gttgtagttccacgagatctgcagcgggccgcgcccgtagtacttctgccccgccgcgca 581
|||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 437 gttgtagttccacgagatttgcagcgggccgcgcccgtagtacttctgtcccgcggcgca 378
Query: 582 cggccactgcctgttgctcgcgtcgcagtaggcgttgctcttnttgatctcgctgatgta 641
|||||||||| ||||||||| |||||||||||||||| |||| |||||||||||||||||
Sbjct: 377 cggccactgcttgttgctcgagtcgcagtaggcgttgttcttgttgatctcgctgatgta 318
Query: 642 gc 643
||
Sbjct: 317 gc 316
>gb|CW448428.1|CW448428 fsbb001f182a11k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f182a11, DNA
sequence
Length = 633
Score = 440 bits (222), Expect = e-122
Identities = 335/373 (89%)
Strand = Plus / Plus
Query: 268 gggtcgacgcggagctgctggcagtactgcttgtagtagccgacgcgcgcgttcatctgg 327
|||||||||| || ||||||||||||||||||||||||||| || ||||||||||| ||
Sbjct: 261 gggtcgacgccgaactgctggcagtactgcttgtagtagcccacccgcgcgttcatttgc 320
Query: 328 gcggggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaag 387
|| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 gcagggttgtttccgttgcactcgagggcgccgtcgatggccctgatggtggcgccgaac 380
Query: 388 ccctgcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcg 447
|| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccttgcggcatcaccccgtgcacgttgttcatccagaaccagagcgccgtcttgaacgcg 440
Query: 448 atcacggcgtcctgcgccaccctgttggggtcggcgagcccgttgaagccgatgtccctc 507
||||||| ||||||||||||| ||| |||| ||||||||| ||||||||| ||||||
Sbjct: 441 atcacggggtcctgcgccaccatgtccgggttcccgagcccgtcgaagccgatctccctc 500
Query: 508 ccggcgggcccgtagttgtagttccacgagatctgcagcgggccgcgcccgtagtacttc 567
||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccggcaggaccgtagttgtagttccacgagatctgcagcgggccgcgcccgtagtacttc 560
Query: 568 tgccccgccgcgcacggccactgcctgttgctcgcgtcgcagtaggcgttgctcttnttg 627
| ||||| ||||||||||| || |||||||| || |||||||||| || ||| |||
Sbjct: 561 ttccccggggcgcacggccattgtgcgttgctcgagttgcagtaggcgctgttctcgttg 620
Query: 628 atctcgctgatgt 640
|||||||| ||||
Sbjct: 621 atctcgcttatgt 633
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 222,078
Number of Sequences: 832831
Number of extensions: 222078
Number of successful extensions: 79147
Number of sequences better than 0.5: 253
Number of HSP's better than 0.5 without gapping: 253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78441
Number of HSP's gapped (non-prelim): 655
length of query: 753
length of database: 491,359,669
effective HSP length: 20
effective length of query: 733
effective length of database: 474,703,049
effective search space: 347957334917
effective search space used: 347957334917
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)