BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161238.2.2
(1186 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN132942.1|CN132942 OX1_9_D11.b1_A002 Oxidatively-stress... 720 0.0
gb|BE918012.1|BE918012 OV1_8_G11.g1_A002 Ovary 1 (OV1) Sorg... 690 0.0
gb|CD223183.1|CD223183 CCC1_26_G01.g1_A007 Callus culture/c... 682 0.0
gb|AY047607.1| Sorghum bicolor chitinase-B mRNA, partial cds 682 0.0
gb|BE918591.1|BE918591 OV1_8_G11.b1_A002 Ovary 1 (OV1) Sorg... 678 0.0
gb|CN133023.1|CN133023 OX1_9_D11.g1_A002 Oxidatively-stress... 672 0.0
gb|AY047608.1| Sorghum bicolor chitinase-B1 mRNA, complete cds 666 0.0
gb|BE363379.1|BE363379 WS1_62_C05.g1_A002 Water-stressed 1 ... 601 e-170
gb|CD226631.1|CD226631 CCC1_47_H05.b1_A007 Callus culture/c... 571 e-161
gb|AW680953.1|AW680953 WS1_9_A06.b1_A002 Water-stressed 1 (... 569 e-160
gb|BE363714.1|BE363714 WS1_69_C06.g2_A002 Water-stressed 1 ... 569 e-160
gb|CD221995.1|CD221995 CCC1_1_C09.b1_A007 Callus culture/ce... 569 e-160
gb|CD222353.1|CD222353 CCC1_21_F09.b1_A007 Callus culture/c... 569 e-160
gb|CD225895.1|CD225895 CCC1_42_B03.b1_A007 Callus culture/c... 561 e-158
gb|AW924422.1|AW924422 WS1_69_C06.b1_A002 Water-stressed 1 ... 553 e-155
gb|AW746018.1|AW746018 WS1_38_H11.g1_A002 Water-stressed 1 ... 549 e-154
gb|CD224094.1|CD224094 CCC1_32_C12.b1_A007 Callus culture/c... 549 e-154
gb|CD226332.1|CD226332 CCC1_45_F08.b1_A007 Callus culture/c... 549 e-154
gb|BG101749.1|BG101749 EM1_5_G10.b1_A002 Embryo 1 (EM1) Sor... 543 e-152
gb|CX610007.1|CX610007 ANR1_16_C10.b1_A002 Anaerobic roots ... 535 e-150
gb|CL160722.1|CL160722 104_351_10805186_116_31825_242 Sorgh... 523 e-146
gb|CW365833.1|CW365833 fsbb001f038i18k0 Sorghum methylation... 523 e-146
gb|CD464022.1|CD464022 ETH1_48_G10.b1_A002 Ethylene-treated... 521 e-146
gb|AF402939.1|AF402939 Sorghum halepense chitinase-B gene, ... 515 e-144
gb|CD220272.1|CD220272 CCC1_66_G11.b1_A007 Callus culture/c... 513 e-143
gb|CD226807.1|CD226807 CCC1_48_C11.b1_A007 Callus culture/c... 502 e-140
gb|AW745819.1|AW745819 WS1_37_H11.g1_A002 Water-stressed 1 ... 494 e-137
gb|AF402938.1|AF402938 Sorghum arundinaceum chitinase-B gen... 492 e-137
gb|AW922776.1|AW922776 DG1_46_C01.g1_A002 Dark Grown 1 (DG1... 490 e-136
gb|CD228493.1|CD228493 CCC1_8_E11.b1_A007 Callus culture/ce... 488 e-136
gb|CW302450.1|CW302450 104_786_11464725_116_35662_085 Sorgh... 482 e-134
gb|CX613448.1|CX613448 GABR1_8_E12.b1_A002 GA- or brassinol... 482 e-134
gb|AW922735.1|AW922735 DG1_45_B06.g1_A002 Dark Grown 1 (DG1... 476 e-132
gb|CN151360.1|CN151360 WOUND1_75_B02.b1_A002 Wounded leaves... 476 e-132
gb|CD227445.1|CD227445 CCC1_51_E06.g1_A007 Callus culture/c... 468 e-130
gb|AY048375.1| Sorghum bicolor chitinase-B gene, partial cds 468 e-130
gb|CD222724.1|CD222724 CCC1_23_G10.g1_A007 Callus culture/c... 462 e-128
gb|CD226424.1|CD226424 CCC1_45_F08.g1_A007 Callus culture/c... 462 e-128
gb|CD229358.1|CD229358 CCC1_14_E11.g1_A007 Callus culture/c... 462 e-128
gb|CD432211.1|CD432211 ETH1_26_H07.g1_A002 Ethylene-treated... 462 e-128
gb|CD228603.1|CD228603 CCC1_8_E11.g1_A007 Callus culture/ce... 458 e-127
gb|CD229356.1|CD229356 CCC1_14_A10.g1_A007 Callus culture/c... 454 e-126
gb|CD464127.1|CD464127 ETH1_48_G10.g1_A002 Ethylene-treated... 450 e-124
gb|CD220668.1|CD220668 CCC1_68_B04.g1_A007 Callus culture/c... 448 e-124
gb|AW746695.1|AW746695 WS1_54_E02.g1_A002 Water-stressed 1 ... 440 e-121
gb|CD432114.1|CD432114 ETH1_26_H07.b1_A002 Ethylene-treated... 440 e-121
gb|AW745790.1|AW745790 WS1_37_H11.b1_A002 Water-stressed 1 ... 436 e-120
gb|CN151443.1|CN151443 WOUND1_75_B02.g1_A002 Wounded leaves... 436 e-120
gb|CD222883.1|CD222883 CCC1_24_C04.g1_A007 Callus culture/c... 428 e-118
gb|CD223234.1|CD223234 CCC1_26_D09.g1_A007 Callus culture/c... 428 e-118
gb|CD222692.1|CD222692 CCC1_23_G09.g1_A007 Callus culture/c... 426 e-117
gb|CX613534.1|CX613534 GABR1_8_E12.g1_A002 GA- or brassinol... 424 e-117
gb|BG556500.1|BG556500 EM1_37_H12.g1_A002 Embryo 1 (EM1) So... 422 e-116
gb|CD223041.1|CD223041 CCC1_25_F06.g1_A007 Callus culture/c... 422 e-116
gb|CW098317.1|CW098317 104_464_11002941_148_34366_083 Sorgh... 420 e-115
gb|CD223269.1|CD223269 CCC1_27_E04.b1_A007 Callus culture/c... 420 e-115
gb|CD224145.1|CD224145 CCC1_32_A09.b1_A007 Callus culture/c... 420 e-115
gb|CD227859.1|CD227859 CCC1_56_F04.b1_A007 Callus culture/c... 420 e-115
gb|CD228687.1|CD228687 CCC1_9_D03.b1_A007 Callus culture/ce... 420 e-115
gb|CD220455.1|CD220455 CCC1_67_F06.b1_A007 Callus culture/c... 418 e-115
gb|CD229903.1|CD229903 CCC1_20_C03.g1_A007 Callus culture/c... 418 e-115
gb|CD223379.1|CD223379 CCC1_27_E04.g1_A007 Callus culture/c... 416 e-114
gb|CD225586.1|CD225586 CCC1_40_H10.b1_A007 Callus culture/c... 416 e-114
gb|CD229697.1|CD229697 CCC1_18_D08.g1_A007 Callus culture/c... 416 e-114
gb|CX610094.1|CX610094 ANR1_16_C10.g1_A002 Anaerobic roots ... 416 e-114
gb|CD222930.1|CD222930 CCC1_25_F06.b1_A007 Callus culture/c... 414 e-114
gb|CD226002.1|CD226002 CCC1_42_B03.g1_A007 Callus culture/c... 414 e-114
gb|CD221392.1|CD221392 CCC1_54_C04.b1_A007 Callus culture/c... 412 e-113
gb|CD226496.1|CD226496 CCC1_46_E08.b1_A007 Callus culture/c... 412 e-113
gb|CD228140.1|CD228140 CCC1_6_E03.b1_A007 Callus culture/ce... 412 e-113
gb|CD229477.1|CD229477 CCC1_16_C07.b1_A007 Callus culture/c... 412 e-113
gb|CD223848.1|CD223848 CCC1_30_F03.g1_A007 Callus culture/c... 410 e-112
gb|CD228270.1|CD228270 CCC1_6_F02.g1_A007 Callus culture/ce... 408 e-112
gb|CD229365.1|CD229365 CCC1_14_D09.g1_A007 Callus culture/c... 408 e-112
gb|CW275250.1|CW275250 104_748_11404861_148_35382_055 Sorgh... 406 e-111
gb|CD220568.1|CD220568 CCC1_68_B04.b1_A007 Callus culture/c... 406 e-111
gb|CD223155.1|CD223155 CCC1_26_G01.b1_A007 Callus culture/c... 406 e-111
gb|CW150339.1|CW150339 104_549_11142974_116_36302_051 Sorgh... 404 e-111
gb|CD229563.1|CD229563 CCC1_16_C07.g1_A007 Callus culture/c... 404 e-111
gb|CW088904.1|CW088904 104_434_10948392_114_32602_096 Sorgh... 398 e-109
gb|CD220480.1|CD220480 CCC1_67_F06.g1_A007 Callus culture/c... 396 e-108
gb|CD220708.1|CD220708 CCC1_68_C10.g1_A007 Callus culture/c... 396 e-108
gb|CD222029.1|CD222029 CCC1_1_C09.g1_A007 Callus culture/ce... 396 e-108
gb|CD226858.1|CD226858 CCC1_48_E04.g1_A007 Callus culture/c... 396 e-108
gb|CD227763.1|CD227763 CCC1_53_C09.g1_A007 Callus culture/c... 396 e-108
gb|CD228252.1|CD228252 CCC1_6_E03.g1_A007 Callus culture/ce... 396 e-108
gb|CD462568.1|CD462568 ETH1_38_G06.g1_A002 Ethylene-treated... 396 e-108
gb|CW448428.1|CW448428 fsbb001f182a11k0 Sorghum methylation... 394 e-108
gb|CX616381.1|CX616381 GABR1_27_C09.g1_A002 GA- or brassino... 394 e-108
gb|CD229267.1|CD229267 CCC1_14_D09.b1_A007 Callus culture/c... 391 e-106
gb|AW924229.1|AW924229 WS1_51_H04.b1_A002 Water-stressed 1 ... 385 e-105
gb|BE357733.1|BE357733 DG1_22_D10.b1_A002 Dark Grown 1 (DG1... 385 e-105
gb|CD220677.1|CD220677 CCC1_68_C11.g1_A007 Callus culture/c... 385 e-105
gb|CD224981.1|CD224981 CCC1_37_D02.g1_A007 Callus culture/c... 385 e-105
gb|CN134928.1|CN134928 OX1_29_A10.g1_A002 Oxidatively-stres... 383 e-104
gb|BG649146.1|BG649146 EM1_56_F01.b1_A002 Embryo 1 (EM1) So... 377 e-102
gb|CD225687.1|CD225687 CCC1_40_B05.g1_A007 Callus culture/c... 377 e-102
gb|DQ190423.1| Sorghum halepense isolate hal4 chitinase-B (... 377 e-102
gb|DQ190424.1| Sorghum halepense isolate hal6 chitinase-B (... 377 e-102
gb|CD223669.1|CD223669 CCC1_29_G02.g1_A007 Callus culture/c... 375 e-102
gb|CD226725.1|CD226725 CCC1_47_H05.g1_A007 Callus culture/c... 373 e-101
gb|DQ190422.1| Sorghum halepense isolate hal3 chitinase-B (... 369 e-100
gb|CD228767.1|CD228767 CCC1_9_D11.g1_A007 Callus culture/ce... 365 6e-099
gb|CW066077.1|CW066077 104_313_10523499_114_30148 Sorghum m... 359 4e-097
gb|CW318996.1|CW318996 104_811_11474252_116_35881_074 Sorgh... 359 4e-097
gb|CW357974.1|CW357974 fsbb001f024n22k0 Sorghum methylation... 359 4e-097
gb|BE359997.1|BE359997 DG1_60_H07.g2_A002 Dark Grown 1 (DG1... 359 4e-097
gb|CD423411.1|CD423411 SA1_23_C09.b1_A002 Salicylic acid-tr... 359 4e-097
gb|CD432032.1|CD432032 ETH1_12_F04.g1_A002 Ethylene-treated... 359 4e-097
gb|CW117036.1|CW117036 104_493_11107443_148_34610_016 Sorgh... 349 4e-094
gb|CD229825.1|CD229825 CCC1_19_F11.g1_A007 Callus culture/c... 349 4e-094
gb|CN135214.1|CN135214 OX1_31_G02.b1_A002 Oxidatively-stres... 337 1e-090
gb|BG463695.1|BG463695 EM1_50_H02.g1_A002 Embryo 1 (EM1) So... 333 2e-089
gb|BG464391.1|BG464391 EM1_69_B11.g1_A002 Embryo 1 (EM1) So... 331 9e-089
gb|BE357497.1|BE357497 DG1_20_E06.b2_A002 Dark Grown 1 (DG1... 329 3e-088
gb|CD222193.1|CD222193 CCC1_2_C04.g1_A007 Callus culture/ce... 329 3e-088
gb|CN134927.1|CN134927 OX1_29_A09.g1_A002 Oxidatively-stres... 321 8e-086
gb|BG356189.1|BG356189 EM1_22_E10.b1_A002 Embryo 1 (EM1) So... 319 3e-085
gb|CD221556.1|CD221556 CCC1_55_F09.g1_A007 Callus culture/c... 319 3e-085
gb|CD226602.1|CD226602 CCC1_46_E08.g1_A007 Callus culture/c... 319 3e-085
gb|BG102665.1|BG102665 RHIZ2_35_G08.g1_A003 Rhizome2 (RHIZ2... 317 1e-084
gb|CW489486.1|CW489486 fsbb001f274h04f0 Sorghum methylation... 315 5e-084
gb|BE357811.1|BE357811 DG1_22_D10.g1_A002 Dark Grown 1 (DG1... 315 5e-084
gb|BG049497.1|BG049497 OV1_20_G04.g1_A002 Ovary 1 (OV1) Sor... 315 5e-084
gb|CD222500.1|CD222500 CCC1_22_B03.b1_A007 Callus culture/c... 311 8e-083
gb|CD222476.1|CD222476 CCC1_22_B04.b1_A007 Callus culture/c... 309 3e-082
gb|CD221837.1|CD221837 CCC1_71_F05.b1_A007 Callus culture/c... 301 8e-080
gb|BE358239.1|BE358239 DG1_26_D03.b2_A002 Dark Grown 1 (DG1... 299 3e-079
gb|CD228772.1|CD228772 CCC1_9_D03.g1_A007 Callus culture/ce... 299 3e-079
gb|AW746429.1|AW746429 WS1_53_G09.b1_A002 Water-stressed 1 ... 297 1e-078
gb|CW150340.1|CW150340 104_549_11142974_148_36301_051 Sorgh... 293 2e-077
gb|CD228683.1|CD228683 CCC1_9_D11.b1_A007 Callus culture/ce... 293 2e-077
gb|BG049053.1|BG049053 OV1_22_F09.g1_A002 Ovary 1 (OV1) Sor... 291 7e-077
gb|AW287001.2|AW287001 LG1_264_C03.b1_A002 Light Grown 1 (L... 289 3e-076
gb|BG102992.1|BG102992 RHIZ2_35_G08.b1_A003 Rhizome2 (RHIZ2... 289 3e-076
gb|CD220604.1|CD220604 CCC1_68_C10.b1_A007 Callus culture/c... 289 3e-076
gb|CD222097.1|CD222097 CCC1_2_C04.b1_A007 Callus culture/ce... 289 3e-076
gb|CD220381.1|CD220381 CCC1_66_G11.g1_A007 Callus culture/c... 287 1e-075
gb|CN130309.1|CN130309 RHOH1_40_D04.g1_A002 Acid- and alkal... 287 1e-075
gb|AW922596.1|AW922596 DG1_46_C01.b1_A002 Dark Grown 1 (DG1... 281 7e-074
gb|CD431984.1|CD431984 ETH1_12_F04.b1_A002 Ethylene-treated... 281 7e-074
gb|AW924442.1|AW924442 WS1_69_C06.g1_A002 Water-stressed 1 ... 272 7e-071
gb|CD221665.1|CD221665 CCC1_70_G05.b1_A007 Callus culture/c... 272 7e-071
gb|CD463839.1|CD463839 ETH1_47_H03.b1_A002 Ethylene-treated... 272 7e-071
gb|CD463973.1|CD463973 ETH1_47_H03.g1_A002 Ethylene-treated... 272 7e-071
gb|CF770982.1|CF770982 DSBF1_12_D05.g1_A010 Drought-stresse... 272 7e-071
gb|BG556657.1|BG556657 EM1_37_H12.b1_A002 Embryo 1 (EM1) So... 262 7e-068
gb|CW119449.1|CW119449 104_496_11108775_116_34638_058 Sorgh... 258 1e-066
gb|CW120215.1|CW120215 104_497_11109200_148_34647_024 Sorgh... 252 6e-065
gb|CW429227.1|CW429227 fsbb001f142f23f0 Sorghum methylation... 252 6e-065
gb|BG048760.1|BG048760 OV1_22_F09.b1_A002 Ovary 1 (OV1) Sor... 252 6e-065
gb|CW493211.1|CW493211 fsbb001f283n22k0 Sorghum methylation... 250 3e-064
gb|CD229831.1|CD229831 CCC1_19_B02.g1_A007 Callus culture/c... 250 3e-064
gb|CW437319.1|CW437319 fsbb001f154g03k0 Sorghum methylation... 236 4e-060
gb|AW672289.1|AW672289 LG1_358_A05.b1_A002 Light Grown 1 (L... 236 4e-060
gb|CN135290.1|CN135290 OX1_31_G02.g1_A002 Oxidatively-stres... 234 2e-059
gb|BG464063.1|BG464063 EM1_69_B11.b1_A002 Embryo 1 (EM1) So... 232 6e-059
gb|CD236439.1|CD236439 SS1_34_G03.b1_A012 Salt-stressed see... 230 2e-058
gb|CD220577.1|CD220577 CCC1_68_C11.b1_A007 Callus culture/c... 222 6e-056
gb|CW030154.1|CW030154 104_258_10500091_114_30403 Sorghum m... 208 9e-052
gb|CW259984.1|CW259984 104_726_11228718_148_35189_023 Sorgh... 208 9e-052
gb|CW039394.1|CW039394 104_272_10505475_115_30390 Sorghum m... 202 5e-050
gb|CW285684.1|CW285684 104_763_11410466_116_35510_013 Sorgh... 202 5e-050
gb|CW394373.1|CW394373 fsbb001f081p01f0 Sorghum methylation... 202 5e-050
gb|AW746206.1|AW746206 WS1_40_B10.b1_A002 Water-stressed 1 ... 202 5e-050
gb|CD423525.1|CD423525 SA1_23_C09.g1_A002 Salicylic acid-tr... 202 5e-050
gb|CW065719.1|CW065719 104_312_10523301_114_30129 Sorghum m... 200 2e-049
gb|CW415388.1|CW415388 fsbb001f115h14f0 Sorghum methylation... 200 2e-049
gb|BG412507.1|BG412507 OV2_35_C01.g1_A002 Ovary 2 (OV2) Sor... 198 8e-049
gb|BG557755.1|BG557755 EM1_56_F01.g1_A002 Embryo 1 (EM1) So... 196 3e-048
gb|CW098316.1|CW098316 104_464_11002941_116_34362_083 Sorgh... 194 1e-047
gb|BG463619.1|BG463619 EM1_50_H02.b1_A002 Embryo 1 (EM1) So... 194 1e-047
gb|BE362915.2|BE362915 DG1_90_E12.g1_A002 Dark Grown 1 (DG1... 194 1e-047
gb|CD221769.1|CD221769 CCC1_70_G05.g1_A007 Callus culture/c... 194 1e-047
gb|CD224256.1|CD224256 CCC1_32_A09.g1_A007 Callus culture/c... 194 1e-047
gb|CD224563.1|CD224563 CCC1_34_B01.g1_A007 Callus culture/c... 194 1e-047
gb|CD225689.1|CD225689 CCC1_40_H10.g1_A007 Callus culture/c... 194 1e-047
gb|CD236461.1|CD236461 SS1_34_G03.g1_A012 Salt-stressed see... 194 1e-047
gb|CW110423.1|CW110423 104_483_11103696_148_34524_094 Sorgh... 192 5e-047
gb|CW280673.1|CW280673 104_756_11407748_148_35454_080 Sorgh... 192 5e-047
gb|CW284180.1|CW284180 104_760_11409637_148_35487_049 Sorgh... 190 2e-046
gb|CW350033.1|CW350033 fsbb001f011c12f0 Sorghum methylation... 190 2e-046
gb|CW445566.1|CW445566 fsbb001f170m12f0 Sorghum methylation... 190 2e-046
gb|CW464036.1|CW464036 fsbb001f213a24k0 Sorghum methylation... 190 2e-046
gb|CD224687.1|CD224687 CCC1_35_C12.g1_A007 Callus culture/c... 190 2e-046
gb|CW231901.1|CW231901 104_681_11211372_148_37350_042 Sorgh... 188 8e-046
gb|CW285685.1|CW285685 104_763_11410466_148_35506_013 Sorgh... 188 8e-046
gb|BG240334.1|BG240334 OV1_20_G04.b1_A002 Ovary 1 (OV1) Sor... 188 8e-046
gb|CW265113.1|CW265113 104_734_11231683_116_35257_076 Sorgh... 186 3e-045
gb|CD229074.1|CD229074 CCC1_11_B01.g1_A007 Callus culture/c... 186 3e-045
gb|AW678309.1|AW678309 WS1_14_G01.g1_A002 Water-stressed 1 ... 182 5e-044
gb|CW054562.1|CW054562 104_295_10516602_114_30186 Sorghum m... 180 2e-043
gb|CW159279.1|CW159279 104_565_11149276_116_36410_010 Sorgh... 180 2e-043
gb|CW447826.1|CW447826 fsbb001f181b24f0 Sorghum methylation... 180 2e-043
gb|CF675624.1|CF675624 CHTN3 Subtractive cDNA library from ... 180 2e-043
gb|CL150624.1|CL150624 104_332_10778666_116_31358_218 Sorgh... 178 8e-043
gb|CW159280.1|CW159280 104_565_11149276_148_36409_010 Sorgh... 178 8e-043
gb|CW204755.1|CW204755 104_632_11186715_116_37060_002 Sorgh... 178 8e-043
gb|CW204756.1|CW204756 104_632_11186715_148_36922_002 Sorgh... 178 8e-043
gb|CW265114.1|CW265114 104_734_11231683_148_35261_076 Sorgh... 178 8e-043
gb|CW418572.1|CW418572 fsbb001f123b03f0 Sorghum methylation... 178 8e-043
gb|CD226733.1|CD226733 CCC1_47_G08.g1_A007 Callus culture/c... 178 8e-043
gb|CW056944.1|CW056944 104_298_10517953_114_30151 Sorghum m... 176 3e-042
gb|CW324492.1|CW324492 104_819_11477191_148_35910_030 Sorgh... 176 3e-042
gb|CW363965.1|CW363965 fsbb001f035m22f0 Sorghum methylation... 176 3e-042
gb|CD227568.1|CD227568 CCC1_52_A02.b1_A007 Callus culture/c... 176 3e-042
gb|CW065720.1|CW065720 104_312_10523301_115_30130 Sorghum m... 167 3e-039
gb|AW679082.1|AW679082 WS1_22_B12.b1_A002 Water-stressed 1 ... 167 3e-039
gb|BG412816.1|BG412816 OV2_35_C01.b1_A002 Ovary 2 (OV2) Sor... 167 3e-039
gb|BG933438.1|BG933438 WS1_2_D11.b1_A002 Water-stressed 1 (... 167 3e-039
gb|BG933439.1|BG933439 WS1_2_D12.b1_A002 Water-stressed 1 (... 167 3e-039
gb|CD224197.1|CD224197 CCC1_32_C12.g1_A007 Callus culture/c... 167 3e-039
gb|CW069060.1|CW069060 104_318_10525580_1_30095 Sorghum met... 163 5e-038
gb|CW065716.1|CW065716 104_312_10523299_115_30130 Sorghum m... 159 7e-037
gb|BG412123.1|BG412123 OV2_38_C01.b1_A002 Ovary 2 (OV2) Sor... 159 7e-037
gb|CD221924.1|CD221924 CCC1_71_F05.g1_A007 Callus culture/c... 159 7e-037
gb|AW746421.1|AW746421 WS1_53_B03.b1_A002 Water-stressed 1 ... 153 4e-035
gb|CD224577.1|CD224577 CCC1_34_A01.g1_A007 Callus culture/c... 151 2e-034
gb|CL158767.1|CL158767 104_347_10803772_114_31377_364 Sorgh... 143 4e-032
gb|CW357973.1|CW357973 fsbb001f024n22f0 Sorghum methylation... 143 4e-032
gb|BG047595.1|BG047595 OV1_25_H02.b1_A002 Ovary 1 (OV1) Sor... 133 4e-029
gb|CD223287.1|CD223287 CCC1_27_C12.b1_A007 Callus culture/c... 131 2e-028
gb|CD223396.1|CD223396 CCC1_27_C12.g1_A007 Callus culture/c... 131 2e-028
gb|CW318997.1|CW318997 104_811_11474252_148_35885_074 Sorgh... 127 3e-027
gb|CW231900.1|CW231900 104_681_11211372_116_37346_042 Sorgh... 125 1e-026
gb|CW405242.1|CW405242 fsbb001f097l13f0 Sorghum methylation... 125 1e-026
gb|CL191324.1|CL191324 104_410_10906720_114_32533_060 Sorgh... 121 2e-025
gb|CL158768.1|CL158768 104_347_10803772_116_31378_364 Sorgh... 115 1e-023
gb|BE125999.1|BE125999 DG1_60_H07.b1_A002 Dark Grown 1 (DG1... 115 1e-023
gb|CD227591.1|CD227591 CCC1_52_A02.g1_A007 Callus culture/c... 115 1e-023
gb|CW200665.1|CW200665 104_626_11184168_148_36867_092 Sorgh... 113 4e-023
gb|CW451829.1|CW451829 fsbb001f192b10k0 Sorghum methylation... 113 4e-023
gb|CW284179.1|CW284179 104_760_11409637_116_35483_049 Sorgh... 107 2e-021
gb|BI211225.1|BI211225 IP1_57_D08.b1_A002 Immature pannicle... 105 9e-021
gb|CW246023.1|CW246023 104_706_11221179_148_37598_002 Sorgh... 103 4e-020
gb|CW230071.1|CW230071 104_671_11207654_116_37270_053 Sorgh... 101 1e-019
gb|BG411799.1|BG411799 OV2_38_C01.g1_A002 Ovary 2 (OV2) Sor... 101 1e-019
gb|CW400946.1|CW400946 fsbb001f091i05k0 Sorghum methylation... 100 6e-019
gb|CW275249.1|CW275249 104_748_11404861_116_35378_055 Sorgh... 98 2e-018
gb|CW448427.1|CW448427 fsbb001f182a11f0 Sorghum methylation... 98 2e-018
gb|CW493210.1|CW493210 fsbb001f283n22f0 Sorghum methylation... 98 2e-018
gb|BE593437.1|BE593437 WS1_97_H03.b1_A002 Water-stressed 1 ... 98 2e-018
gb|CN130235.1|CN130235 RHOH1_40_D04.b1_A002 Acid- and alkal... 96 9e-018
gb|BF507073.1|BF507073 17205P-8c Pooled green leaf and root... 94 4e-017
gb|CW400945.1|CW400945 fsbb001f091i05f0 Sorghum methylation... 90 6e-016
gb|AW923860.1|AW923860 DG1_60_H07.g1_A002 Dark Grown 1 (DG1... 90 6e-016
gb|CD223123.1|CD223123 CCC1_26_D09.b1_A007 Callus culture/c... 90 6e-016
gb|BZ338038.1|BZ338038 ia92e12.b1 WGS-SbicolorF (JM107 adap... 84 3e-014
gb|CW276618.1|CW276618 104_750_11405587_148_35398_074 Sorgh... 84 3e-014
gb|CW388024.1|CW388024 fsbb001f072j20f0 Sorghum methylation... 84 3e-014
gb|CW388025.1|CW388025 fsbb001f072j20k0 Sorghum methylation... 84 3e-014
gb|CW277877.1|CW277877 104_752_11406259_148_35680_078 Sorgh... 80 5e-013
gb|CW324491.1|CW324491 104_819_11477191_116_35914_030 Sorgh... 80 5e-013
gb|BF507065.1|BF507065 17205P-2 Pooled green leaf and root ... 80 5e-013
gb|BZ330961.1|BZ330961 hw03d05.g1 WGS-SbicolorF (JM107 adap... 78 2e-012
gb|CL160721.1|CL160721 104_351_10805186_114_31824_242 Sorgh... 76 8e-012
gb|CW307372.1|CW307372 104_795_11468105_148_35736_073 Sorgh... 72 1e-010
gb|BG047953.1|BG047953 OV1_25_H02.g1_A002 Ovary 1 (OV1) Sor... 70 5e-010
gb|CW206617.1|CW206617 104_635_11187687_116_36961_058 Sorgh... 64 3e-008
gb|CW488277.1|CW488277 fsbb001f254j12f0 Sorghum methylation... 64 3e-008
gb|BE597800.1|BE597800 PI1_65_E11.g1_A002 Pathogen induced ... 64 3e-008
gb|BE598085.1|BE598085 PI1_65_E11.b1_A002 Pathogen induced ... 64 3e-008
gb|CW263590.1|CW263590 104_731_11230799_148_35217_082 Sorgh... 60 5e-007
gb|CN129927.1|CN129927 RHOH1_38_F07.b1_A002 Acid- and alkal... 60 5e-007
gb|CN130014.1|CN130014 RHOH1_38_F07.g1_A002 Acid- and alkal... 60 5e-007
gb|CW090018.1|CW090018 104_435_10949041_114_32588_003 Sorgh... 52 1e-004
gb|CW363966.1|CW363966 fsbb001f035m22k0 Sorghum methylation... 52 1e-004
gb|CW422471.1|CW422471 fsbb001f131m09f0 Sorghum methylation... 52 1e-004
gb|CW478441.1|CW478441 fsbb001f236f09f0 Sorghum methylation... 52 1e-004
gb|AW746504.1|AW746504 WS1_53_G09.g1_A002 Water-stressed 1 ... 52 1e-004
gb|CW302451.1|CW302451 104_786_11464725_148_35666_085 Sorgh... 48 0.002
gb|CW365832.1|CW365832 fsbb001f038i18f0 Sorghum methylation... 48 0.002
gb|BE597906.1|BE597906 PI1_66_H02.g1_A002 Pathogen induced ... 48 0.002
gb|BE598196.1|BE598196 PI1_66_H02.b1_A002 Pathogen induced ... 48 0.002
gb|CW266083.1|CW266083 104_735_11232237_148_35267_085 Sorgh... 46 0.007
gb|CW429228.1|CW429228 fsbb001f142f23k0 Sorghum methylation... 46 0.007
gb|CW430428.1|CW430428 fsbb001f144c05f0 Sorghum methylation... 46 0.007
gb|BE358858.1|BE358858 DG1_32_F07.g1_A002 Dark Grown 1 (DG1... 46 0.007
gb|CD429983.1|CD429983 ETH1_16_A10.g1_A002 Ethylene-treated... 46 0.007
gb|CF486597.1|CF486597 POL1_38_D07.g1_A002 Pollen Sorghum b... 46 0.007
gb|CN130329.1|CN130329 RHOH1_40_F08.g1_A002 Acid- and alkal... 46 0.007
gb|CN137353.1|CN137353 OX1_56_F03.g1_A002 Oxidatively-stres... 46 0.007
gb|CL161206.1|CL161206 104_352_10805558_116_31827_230 Sorgh... 44 0.029
gb|CW088905.1|CW088905 104_434_10948392_115_32585_096 Sorgh... 44 0.029
gb|CW425870.1|CW425870 fsbb001f137a05f0 Sorghum methylation... 44 0.029
gb|CW430429.1|CW430429 fsbb001f144c05k0 Sorghum methylation... 44 0.029
gb|AI724517.1|AI724517 RHIZ1_37_C07.y1_A001 Rhizome1 (RHIZ1... 44 0.029
gb|BE367523.1|BE367523 PI1_8_E06.g1_A002 Pathogen induced 1... 44 0.029
gb|CD223642.1|CD223642 CCC1_29_G02.b1_A007 Callus culture/c... 44 0.029
gb|CD229172.1|CD229172 CCC1_13_C06.g1_A007 Callus culture/c... 44 0.029
gb|CN130255.1|CN130255 RHOH1_40_F08.b1_A002 Acid- and alkal... 44 0.029
gb|CN137269.1|CN137269 OX1_56_F03.b1_A002 Oxidatively-stres... 44 0.029
gb|CW046146.1|CW046146 104_283_10509998_114_30137 Sorghum m... 42 0.12
gb|CW120214.1|CW120214 104_497_11109200_116_34643_024 Sorgh... 42 0.12
gb|CW307371.1|CW307371 104_795_11468105_116_35728_073 Sorgh... 42 0.12
gb|CW351907.1|CW351907 fsbb001f013o09f0 Sorghum methylation... 42 0.12
gb|CW362042.1|CW362042 fsbb001f030o20k0 Sorghum methylation... 42 0.12
gb|CW470070.1|CW470070 fsbb001f223b16f0 Sorghum methylation... 42 0.12
gb|CD225584.1|CD225584 CCC1_40_B05.b1_A007 Callus culture/c... 42 0.12
gb|BF507060.1|BF507060 17205P-13 Pooled green leaf and root... 40 0.46
>gb|CN132942.1|CN132942 OX1_9_D11.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_9_D11_A002 3', mRNA sequence
Length = 812
Score = 720 bits (363), Expect = 0.0
Identities = 563/627 (89%), Gaps = 7/627 (1%)
Strand = Plus / Plus
Query: 289 ggtgcgaacgtggctagcgtcgtcaccggctccttcttcaacggcatcaagaaccaggcc 348
|||| |||||||||| |||| ||||||| | | ||||||||| |||||||||||||||||
Sbjct: 15 ggtgggaacgtggctggcgttgtcaccgacgcattcttcaacagcatcaagaaccaggcc 74
Query: 349 gggagcgggtgcgagggcaagaacttctacacccggagcgcgttcctgagcgccgtcaag 408
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 75 gggaacgggtgcgagggcaagaacttctacacccggagcgcgttcctgagcgccgccgac 134
Query: 409 gcgtacccaggcttcgcccacggcgggtcgcaggtgcagggcaagcgcgagatcgccgcc 468
|||||| |||||||| ||| ||||| |||||||||||||||||||||||||||
Sbjct: 135 gcgtacaaaggcttcggt---ggcaggtcg---gtgcagggcaagcgcgagatcgccgcc 188
Query: 469 ttcttcgcgcacgccacgcacgagaccgggcatttctgctacatcagcgagatcaacaag 528
|||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 189 ttcttcgcccacatcacgcacgagaccggacatttctgctacatcagcgagatcaacaag 248
Query: 529 agcaacgcctactgcgacccgagcaagaggcagtggccgtgcgccgcggggcagaagtac 588
| |||||||||||||||| ||||||| |||||||||||||| |||||||| |||||||||
Sbjct: 249 aacaacgcctactgcgactcgagcaacaggcagtggccgtgtgccgcgggtcagaagtac 308
Query: 589 tacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcggggagggcc 648
|||||||||||||||||||| |||||||||||||||||||||||||| || ||||||| |
Sbjct: 309 tacgggcgcggcccgctgcaaatctcgtggaactacaactacgggcctgccgggagggac 368
Query: 649 atcggcttcgacgggctcggggaccccggcagggtggcgcgggacgccgtggtggcgttc 708
||||||||||||||||| || |||| | ||||||||||| ||||||||||| ||||||
Sbjct: 369 atcggcttcgacgggcttcggaacccggacagggtggcgcaagacgccgtggtcgcgttc 428
Query: 709 aaggcggcgctctggttctggatgaacagcgtgcacggggtggtgccgcaggggttcggc 768
||| |||||||||||||||||| |||| ||||||||||||| || ||||||||||||||
Sbjct: 429 aagacggcgctctggttctggaccaacaacgtgcacggggtgatgtcgcaggggttcggc 488
Query: 769 gccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaaccccgcccagatg 828
||||||| |||||||||||||||||||||||||||| ||| || || | |||||||||
Sbjct: 489 gccaccatcagggccatcaacggcgccctcgagtgcaacggcaagaatactgcccagatg 548
Query: 829 aacgcgcgcgtcggctactacaggcagtactgccgccagctcggcgtcgaccccgggccc 888
|||||||| || |||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 549 aacgcgcgggtgggctactacaggcagtactgccagcagctcggcgtcgaccccggaccc 608
Query: 889 aacctcacctgctaggctagctaggcg 915
|||||||| ||||||| ||||||||||
Sbjct: 609 aacctcacttgctagg-tagctaggcg 634
>gb|BE918012.1|BE918012 OV1_8_G11.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 710
Score = 690 bits (348), Expect = 0.0
Identities = 524/580 (90%), Gaps = 7/580 (1%)
Strand = Plus / Plus
Query: 336 caagaaccaggccgggagcgggtgcgagggcaagaacttctacacccggagcgcgttcct 395
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caagaaccaggccgggaacgggtgcgagggcaagaacttctacacccggagcgcgttcct 60
Query: 396 gagcgccgtcaaggcgtacccaggcttcgcccacggcgggtcgcaggtgcagggcaagcg 455
|||||||| | | |||||| |||||||| ||| ||||| ||||||||||||||
Sbjct: 61 gagcgccgccgacgcgtacaaaggcttcggt---ggcaggtcg---gtgcagggcaagcg 114
Query: 456 cgagatcgccgccttcttcgcgcacgccacgcacgagaccgggcatttctgctacatcag 515
||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||
Sbjct: 115 cgagatcgccgccttcttcgcccacatcacgcacgagaccggacatttctgctacatcag 174
Query: 516 cgagatcaacaagagcaacgcctactgcgacccgagcaagaggcagtggccgtgcgccgc 575
|||||||||||||| |||||||||||||||| ||||||| |||||||||||||| |||||
Sbjct: 175 cgagatcaacaagaacaacgcctactgcgactcgagcaacaggcagtggccgtgtgccgc 234
Query: 576 ggggcagaagtactacgggcgcggcccgctgcagatctcgtggaactacaactacgggcc 635
||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 235 gggtcagaagtactacgggcgcggcccgctgcaaatctcgtggaactacaactacgggcc 294
Query: 636 cgcggggagggccatcggcttcgacgggctcggggaccccggcagggtggcgcgggacgc 695
|| ||||||| |||||||||||||||||| || |||| | ||||||||||| ||||||
Sbjct: 295 tgccgggagggacatcggcttcgacgggcttcggaacccggacagggtggcgcaggacgc 354
Query: 696 cgtggtggcgttcaaggcggcgctctggttctggatgaacagcgtgcacggggtggtgcc 755
|||||| ||||||||| |||||||||||||||||| |||| ||||||||||||| || |
Sbjct: 355 cgtggtcgcgttcaagacggcgctctggttctggaccaacaacgtgcacggggtgatgtc 414
Query: 756 gcaggggttcggcgccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaa 815
|||||||||||||||||||| |||||||||||||||||||||||||||| ||| || ||
Sbjct: 415 gcaggggttcggcgccaccatcagggccatcaacggcgccctcgagtgcaacggcaagaa 474
Query: 816 ccccgcccagatgaacgcgcgcgtcggctactacaggcagtactgccgccagctcggcgt 875
| ||||||||||||||||| || |||||||||||||||||||||| |||||||||||
Sbjct: 475 tactgcccagatgaacgcgcgggtgggctactacaggcagtactgccagcagctcggcgt 534
Query: 876 cgaccccgggcccaacctcacctgctaggctagctaggcg 915
||||||||| ||||||||||| ||||||| ||||||||||
Sbjct: 535 cgaccccggacccaacctcacttgctagg-tagctaggcg 573
>gb|CD223183.1|CD223183 CCC1_26_G01.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_26_G01_A007 5', mRNA sequence
Length = 662
Score = 682 bits (344), Expect = 0.0
Identities = 526/584 (90%), Gaps = 7/584 (1%)
Strand = Plus / Plus
Query: 332 gcatcaagaaccaggccgggagcgggtgcgagggcaagaacttctacacccggagcgcgt 391
||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 8 gcatcaagaaccaggccgggaacgggtgtgagggcaagaacttctacacccggagcgcgt 67
Query: 392 tcctgagcgccgtcaaggcgtacccaggcttcgcccacggcgggtcgcaggtgcagggca 451
|||||||||||| | | |||||| |||||||| ||| ||||| ||||||||||
Sbjct: 68 tcctgagcgccgccgacgcgtacaaaggcttcggt---ggcaggtcg---gtgcagggca 121
Query: 452 agcgcgagatcgccgccttcttcgcgcacgccacgcacgagaccgggcatttctgctaca 511
|||||||| |||||||||||||||| ||| ||||||||||||||| |||||||||||||
Sbjct: 122 agcgcgaggtcgccgccttcttcgcccacatcacgcacgagaccggacatttctgctaca 181
Query: 512 tcagcgagatcaacaagagcaacgcctactgcgacccgagcaagaggcagtggccgtgcg 571
|||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||| |
Sbjct: 182 tcagcgagatcaacaagaacaacgcctactgcgactcgagcaacaggcagtggccgtgtg 241
Query: 572 ccgcggggcagaagtactacgggcgcggcccgctgcagatctcgtggaactacaactacg 631
||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 242 ccgcgggtcagaagtactacgggcgcggcccgctgcaaatctcgtggaactacaactacg 301
Query: 632 ggcccgcggggagggccatcggcttcgacgggctcggggaccccggcagggtggcgcggg 691
|||| || ||||||| |||||||||||||||||| || |||| | ||||||||||| ||
Sbjct: 302 ggcctgccgggagggacatcggcttcgacgggcttcggaacccggacagggtggcgcagg 361
Query: 692 acgccgtggtggcgttcaaggcggcgctctggttctggatgaacagcgtgcacggggtgg 751
|||||||||| ||||||||| |||||||||||||||||| |||| |||||||||||||
Sbjct: 362 acgccgtggtcgcgttcaagacggcgctctggttctggaccaacaacgtgcacggggtga 421
Query: 752 tgccgcaggggttcggcgccaccaccagggccatcaacggcgccctcgagtgcggcggga 811
|| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |
Sbjct: 422 tgtcgcaggggttcggcgccaccatcagggccatcaacggcgccctcgagtgcaacggca 481
Query: 812 acaaccccgcccagatgaacgcgcgcgtcggctactacaggcagtactgccgccagctcg 871
| || | ||||||||||||||||| || |||||||||||||||||||||| |||||||
Sbjct: 482 agaatactgcccagatgaacgcgcgggtgggctactacaggcagtactgccagcagctcg 541
Query: 872 gcgtcgaccccgggcccaacctcacctgctaggctagctaggcg 915
||||||||||||| ||||||||||| ||||||| ||||||||||
Sbjct: 542 gcgtcgaccccggacccaacctcacttgctagg-tagctaggcg 584
>gb|AY047607.1| Sorghum bicolor chitinase-B mRNA, partial cds
Length = 789
Score = 682 bits (344), Expect = 0.0
Identities = 549/616 (89%), Gaps = 6/616 (0%)
Strand = Plus / Plus
Query: 288 tggtgcgaacgtggctagcgtcgtcaccggctccttcttcaacggcatcaagaaccaggc 347
||||| |||||||| |||||| ||||||| | | ||||||||||||||||||||||||||
Sbjct: 180 tggtgggaacgtgggtagcgttgtcaccgacgcattcttcaacggcatcaagaaccaggc 239
Query: 348 cgggagcgggtgcgagggcaagaacttctacacccggagcgcgttcctgagcgccgtcaa 407
|| ||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||
Sbjct: 240 cgcgagcgggtgcgagggcaagaacttctacaccaggagtgcgttcctgagcgccgccaa 299
Query: 408 ggcgtacccaggcttcgcccacggcgggtcgcaggtgcagggcaagcgcgagatcgccgc 467
||||| | |||||| ||||||||| ||| |||||||||||||||||||||
Sbjct: 300 ctcgtacaaaagcttcggt---ggcgggtcg---gtggcgggcaagcgcgagatcgccgc 353
Query: 468 cttcttcgcgcacgccacgcacgagaccgggcatttctgctacatcagcgagatcaacaa 527
|||||||| || | ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 tttcttcgcccatgtcacccacgagaccgggcatttctgctacatcagcgagatcaacaa 413
Query: 528 gagcaacgcctactgcgacccgagcaagaggcagtggccgtgcgccgcggggcagaagta 587
|| |||||||||||||||| ||||||| | ||||||||||||||||||||| ||||||||
Sbjct: 414 gaacaacgcctactgcgactcgagcaacaagcagtggccgtgcgccgcgggacagaagta 473
Query: 588 ctacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcggggagggc 647
||||||||||||||||||||| |||||||||||||||||||||||||| || |||| |||
Sbjct: 474 ctacgggcgcggcccgctgcaaatctcgtggaactacaactacgggcctgccgggaaggc 533
Query: 648 catcggcttcgacgggctcggggaccccggcagggtggcgcgggacgccgtggtggcgtt 707
|||||||||| ||||||||| | |||| || |||||||| |||||||||| | |||||
Sbjct: 534 catcggcttcaacgggctcgcgaacccgaacaaggtggcgcaggacgccgtgatcgcgtt 593
Query: 708 caaggcggcgctctggttctggatgaacagcgtgcacggggtggtgccgcaggggttcgg 767
|||| |||||||||||| ||||| ||||| ||||||||||||| || |||||||||||||
Sbjct: 594 caagacggcgctctggtactggacgaacaacgtgcacggggtgatgtcgcaggggttcgg 653
Query: 768 cgccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaaccccgcccagat 827
|||||||| |||||||||||||||||||||||||||| ||| || || | ||||||||
Sbjct: 654 cgccaccatcagggccatcaacggcgccctcgagtgcaacggcaagaatactgcccagat 713
Query: 828 gaacgcgcgcgtcggctactacaggcagtactgccgccagctcggcgtcgaccccgggcc 887
||||||||| || |||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 714 gaacgcgcgggtgggctactacaagcagtactgccggcagctcggcgtcgaccccgggcc 773
Query: 888 caacctcacctgctag 903
||||||||||||||||
Sbjct: 774 caacctcacctgctag 789
Score = 200 bits (101), Expect = 2e-049
Identities = 143/157 (91%)
Strand = Plus / Plus
Query: 102 ctggtgactctcgggctatcactcctctgcgctgtcgccggcccggccgccgcgcagaac 161
|||||| ||||||||||| ||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 1 ctggtggctctcgggctagcactcctctgcgctgccgccgtcccggccgccgcgcagaac 60
Query: 162 tgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggcacgaccgacgag 221
|||||||||||| || |||||||||||||||||| |||||||||||||| |||||
Sbjct: 61 tgcggctgccaggcaggttactgctgcagcaagttcggttactgcggcacgacggacgac 120
Query: 222 tactgcggcgacgggtgccagtcgggcccgtgccgct 258
||||| |||||||||||||||||||||||||||||||
Sbjct: 121 tactgtggcgacgggtgccagtcgggcccgtgccgct 157
>gb|BE918591.1|BE918591 OV1_8_G11.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 618
Score = 678 bits (342), Expect = 0.0
Identities = 528/589 (89%), Gaps = 6/589 (1%)
Strand = Plus / Plus
Query: 289 ggtgcgaacgtggctagcgtcgtcaccggctccttcttcaacggcatcaagaaccaggcc 348
|||| |||||||||| |||| ||||||| | | ||||||||| |||||||||||||||||
Sbjct: 36 ggtgggaacgtggctggcgttgtcaccgacgcattcttcaacagcatcaagaaccaggcc 95
Query: 349 gggagcgggtgcgagggcaagaacttctacacccggagcgcgttcctgagcgccgtcaag 408
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 96 gggaacgggtgcgagggcaagaacttctacacccggagcgcgttcctgagcgccgccgac 155
Query: 409 gcgtacccaggcttcgcccacggcgggtcgcaggtgcagggcaagcgcgagatcgccgcc 468
|||||| |||||||| ||| ||||| |||||||||||||||||||||||||||
Sbjct: 156 gcgtacaaaggcttcggt---ggcaggtcg---gtgcagggcaagcgcgagatcgccgcc 209
Query: 469 ttcttcgcgcacgccacgcacgagaccgggcatttctgctacatcagcgagatcaacaag 528
|||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 210 ttcttcgcccacatcacgcacgagaccggacatttctgctacatcagcgagatcaacaag 269
Query: 529 agcaacgcctactgcgacccgagcaagaggcagtggccgtgcgccgcggggcagaagtac 588
| |||||||||||||||| ||||||| |||||||||||||| |||||||| |||||||||
Sbjct: 270 aacaacgcctactgcgactcgagcaacaggcagtggccgtgtgccgcgggtcagaagtac 329
Query: 589 tacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcggggagggcc 648
|||||||||||||||||||| |||||||||||||||||||||||||| || ||||||| |
Sbjct: 330 tacgggcgcggcccgctgcaaatctcgtggaactacaactacgggcctgccgggagggac 389
Query: 649 atcggcttcgacgggctcggggaccccggcagggtggcgcgggacgccgtggtggcgttc 708
||||||||||||||||| || |||| | ||||||||||| |||||||||||| ||||||
Sbjct: 390 atcggcttcgacgggcttcggaacccggacagggtggcgcaggacgccgtggtcgcgttc 449
Query: 709 aaggcggcgctctggttctggatgaacagcgtgcacggggtggtgccgcaggggttcggc 768
||| |||||||||||||||||| |||| ||||||||||||| || ||||||||||||||
Sbjct: 450 aagacggcgctctggttctggaccaacaacgtgcacggggtgatgtcgcaggggttcggc 509
Query: 769 gccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaaccccgcccagatg 828
||||||| |||||||||||||||||||||||||||| ||| || || | |||||||||
Sbjct: 510 gccaccatcagggccatcaacggcgccctcgagtgcaacggcaagaatactgcccagatg 569
Query: 829 aacgcgcgcgtcggctactacaggcagtactgccgccagctcggcgtcg 877
|||||||| || |||||||||| ||||||||||| |||||||||||||
Sbjct: 570 aacgcgcgggtgggctactacangcagtactgccagcagctcggcgtcg 618
>gb|CN133023.1|CN133023 OX1_9_D11.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_9_D11_A002 5', mRNA sequence
Length = 837
Score = 672 bits (339), Expect = 0.0
Identities = 526/587 (89%), Gaps = 6/587 (1%)
Strand = Plus / Plus
Query: 289 ggtgcgaacgtggctagcgtcgtcaccggctccttcttcaacggcatcaagaaccaggcc 348
|||| |||||||||| |||| ||||||| | | ||||||||| |||||||||||||||||
Sbjct: 257 ggtgggaacgtggctggcgttgtcaccgacgcattcttcaacagcatcaagaaccaggcc 316
Query: 349 gggagcgggtgcgagggcaagaacttctacacccggagcgcgttcctgagcgccgtcaag 408
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 317 gggaacgggtgcgagggcaagaacttctacacccggagcgcgttcctgagcgccgccgac 376
Query: 409 gcgtacccaggcttcgcccacggcgggtcgcaggtgcagggcaagcgcgagatcgccgcc 468
|||||| |||||||| ||| ||||| |||||||||||||||||||||||||||
Sbjct: 377 gcgtacaaaggcttcggt---ggcaggtcg---gtgcagggcaagcgcgagatcgccgcc 430
Query: 469 ttcttcgcgcacgccacgcacgagaccgggcatttctgctacatcagcgagatcaacaag 528
|||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 431 ttcttcgcccacatcacgcacgagaccggacatttctgctacatcagcgagatcaacaag 490
Query: 529 agcaacgcctactgcgacccgagcaagaggcagtggccgtgcgccgcggggcagaagtac 588
| |||||||||||||||| ||||||| |||||||||||||| |||||||| |||||||||
Sbjct: 491 aacaacgcctactgcgactcgagcaacaggcagtggccgtgtgccgcgggtcagaagtac 550
Query: 589 tacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcggggagggcc 648
|||||||||||||||||||| |||||||||||||||||||||||||| || ||||||| |
Sbjct: 551 tacgggcgcggcccgctgcaaatctcgtggaactacaactacgggcctgccgggagggac 610
Query: 649 atcggcttcgacgggctcggggaccccggcagggtggcgcgggacgccgtggtggcgttc 708
||||||||||||||||| || |||| | ||||||||||| ||||||||||| ||||||
Sbjct: 611 atcggcttcgacgggcttcggaacccggacagggtggcgcaagacgccgtggtcgcgttc 670
Query: 709 aaggcggcgctctggttctggatgaacagcgtgcacggggtggtgccgcaggggttcggc 768
||| |||||||||||||||||| |||| ||||||||||||| || ||||||||||||||
Sbjct: 671 aagacggcgctctggttctggaccaacaacgtgcacggggtgatgtcgcaggggttcggc 730
Query: 769 gccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaaccccgcccagatg 828
||||||| |||||||||||||||||||||||||||| ||| || || | |||||||||
Sbjct: 731 gccaccatcagggccatcaacggcgccctcgagtgcaacggcaagaatactgcccagatg 790
Query: 829 aacgcgcgcgtcggctactacaggcagtactgccgccagctcggcgt 875
|||||||| || |||||||||||||||||||||| |||||||||||
Sbjct: 791 aacgcgcgggtgggctactacaggcagtactgccagcagctcggcgt 837
Score = 159 bits (80), Expect = 7e-037
Identities = 104/112 (92%)
Strand = Plus / Plus
Query: 147 gccgccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgc 206
|||||||||||||||| |||||||||| || |||||||||||||||||| ||||||
Sbjct: 125 gccgccgcgcagaactacggctgccaggcaggttactgctgcagcaagttcggttactgc 184
Query: 207 ggcacgaccgacgagtactgcggcgacgggtgccagtcgggcccgtgccgct 258
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 ggcacgaccgacgagtactgcggcgacgggtgccagtcgggcccgtgccgct 236
Score = 42.1 bits (21), Expect = 0.12
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 109 ctctcgggctatcactcctctgcgctgtcgccg 141
||||||| ||| ||||||||||||||| |||||
Sbjct: 99 ctctcggcctagcactcctctgcgctgccgccg 131
>gb|AY047608.1| Sorghum bicolor chitinase-B1 mRNA, complete cds
Length = 819
Score = 666 bits (336), Expect = 0.0
Identities = 541/608 (88%), Gaps = 6/608 (0%)
Strand = Plus / Plus
Query: 288 tggtgcgaacgtggctagcgtcgtcaccggctccttcttcaacggcatcaagaaccaggc 347
||||| |||||||| |||||| ||||||| | | ||||||||||||||||||||||||||
Sbjct: 210 tggtgggaacgtgggtagcgttgtcaccgacgcattcttcaacggcatcaagaaccaggc 269
Query: 348 cgggagcgggtgcgagggcaagaacttctacacccggagcgcgttcctgagcgccgtcaa 407
|| ||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||
Sbjct: 270 cgcgagcgggtgcgagggcaagaacttctacaccaggagtgcgttcctgagcgccgccaa 329
Query: 408 ggcgtacccaggcttcgcccacggcgggtcgcaggtgcagggcaagcgcgagatcgccgc 467
||||| | |||||| ||||||||| ||| |||||||||||||||||||||
Sbjct: 330 ctcgtacaaaagcttcggt---ggcgggtcg---gtggcgggcaagcgcgagatcgccgc 383
Query: 468 cttcttcgcgcacgccacgcacgagaccgggcatttctgctacatcagcgagatcaacaa 527
|||||||| || | ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tttcttcgcccatgtcacccacgagaccgggcatttctgctacatcagcgagatcaacaa 443
Query: 528 gagcaacgcctactgcgacccgagcaagaggcagtggccgtgcgccgcggggcagaagta 587
|| |||||||||||||||| ||||||| | ||||||||||||||||||||| ||||||||
Sbjct: 444 gaacaacgcctactgcgactcgagcaacaagcagtggccgtgcgccgcgggacagaagta 503
Query: 588 ctacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcggggagggc 647
||||||||||||||||||||| |||||||||||||||||||||||||| || |||| |||
Sbjct: 504 ctacgggcgcggcccgctgcaaatctcgtggaactacaactacgggcctgccgggaaggc 563
Query: 648 catcggcttcgacgggctcggggaccccggcagggtggcgcgggacgccgtggtggcgtt 707
|||||||||| ||||||||| | |||| || |||||||| |||||||||| | |||||
Sbjct: 564 catcggcttcaacgggctcgcgaacccgaacaaggtggcgcaggacgccgtgatcgcgtt 623
Query: 708 caaggcggcgctctggttctggatgaacagcgtgcacggggtggtgccgcaggggttcgg 767
|||| |||||||||||| ||||| ||||| ||||||||||||| || |||||||||||||
Sbjct: 624 caagacggcgctctggtactggacgaacaacgtgcacggggtgatgtcgcaggggttcgg 683
Query: 768 cgccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaaccccgcccagat 827
|||||||| |||||||||||||||||||||||||||| ||| || || | ||||||||
Sbjct: 684 cgccaccatcagggccatcaacggcgccctcgagtgcaacggcaagaatactgcccagat 743
Query: 828 gaacgcgcgcgtcggctactacaggcagtactgccgccagctcggcgtcgaccccgggcc 887
||||||||| || |||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 744 gaacgcgcgggtgggctactacaagcagtactgccggcagctcggcgtcgaccccgggcc 803
Query: 888 caacctca 895
||||||||
Sbjct: 804 caacctca 811
Score = 194 bits (98), Expect = 1e-047
Identities = 137/150 (91%)
Strand = Plus / Plus
Query: 109 ctctcgggctatcactcctctgcgctgtcgccggcccggccgccgcgcagaactgcggct 168
||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 38 ctctcgggctagcactcctctgcgctgccgccgtcccggccgccgcgcagaactgcggct 97
Query: 169 gccagccaaacgtctgctgcagcaagttcggctactgcggcacgaccgacgagtactgcg 228
||||| || |||||||||||||||||| |||||||||||||| ||||| ||||| |
Sbjct: 98 gccaggcaggttactgctgcagcaagttcggttactgcggcacgacggacgactactgtg 157
Query: 229 gcgacgggtgccagtcgggcccgtgccgct 258
||||||||||||||||||||||||||||||
Sbjct: 158 gcgacgggtgccagtcgggcccgtgccgct 187
>gb|BE363379.1|BE363379 WS1_62_C05.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 534
Score = 601 bits (303), Expect = e-170
Identities = 433/475 (91%), Gaps = 1/475 (0%)
Strand = Plus / Plus
Query: 441 ggtgcagggcaagcgcgagatcgccgccttcttcgcgcacgccacgcacgagaccgggca 500
|||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||
Sbjct: 44 ggtgcagggcaagcgcgagatcgccgccttcttcgcccacatcacgcacgagaccggaca 103
Query: 501 tttctgctacatcagcgagatcaacaagagcaacgcctactgcgacccgagcaagaggca 560
||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||
Sbjct: 104 tttctgctacatcagcgagatcaacaagaacaacgcctactgcgactcgagcaacaggca 163
Query: 561 gtggccgtgcgccgcggggcagaagtactacgggcgcggcccgctgcagatctcgtggaa 620
||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 164 gtggccgtgtgccgcgggtcagaagtactacgggcgcggcccgctgcaaatctcgtggaa 223
Query: 621 ctacaactacgggcccgcggggagggccatcggcttcgacgggctcggggaccccggcag 680
||||||||||||||| || ||||||| |||||||||||||||||| || |||| | |||
Sbjct: 224 ctacaactacgggcctgccgggagggacatcggcttcgacgggcttcggaacccggacag 283
Query: 681 ggtggcgcgggacgccgtggtggcgttcaaggcggcgctctggttctggatgaacagcgt 740
|||||||| |||||||||||| ||||||||| |||||||||||||||||| |||| |||
Sbjct: 284 ggtggcgcaggacgccgtggtcgcgttcaagacggcgctctggttctggaccaacaacgt 343
Query: 741 gcacggggtggtgccgcaggggttcggcgccaccaccagggccatcaacggcgccctcga 800
|||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 344 gcacggggtgatgtcgcaggggttcggcgccaccatcagggccatcaacggcgccctcga 403
Query: 801 gtgcggcgggaacaaccccgcccagatgaacgcgcgcgtcggctactacaggcagtactg 860
|||| ||| || || | ||||||||||||||||| || ||||||||||||||||||||
Sbjct: 404 gtgcaacggcaagaatactgcccagatgaacgcgcgggtgggctactacaggcagtactg 463
Query: 861 ccgccagctcggcgtcgaccccgggcccaacctcacctgctaggctagctaggcg 915
|| |||||||||||||||||||| ||||||||||| || |||| ||||||||||
Sbjct: 464 ccagcagctcggcgtcgaccccggacccaacctcacttgatagg-tagctaggcg 517
>gb|CD226631.1|CD226631 CCC1_47_H05.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_47_H05_A007 3', mRNA sequence
Length = 658
Score = 571 bits (288), Expect = e-161
Identities = 417/460 (90%)
Strand = Plus / Plus
Query: 446 agggcaagcgcgagatcgccgccttcttcgcgcacgccacgcacgagaccgggcatttct 505
|||||||||||||||||||||| |||||||| || | ||| |||||||||||||||||||
Sbjct: 31 agggcaagcgcgagatcgccgctttcttcgcccatgtcacccacgagaccgggcatttct 90
Query: 506 gctacatcagcgagatcaacaagagcaacgcctactgcgacccgagcaagaggcagtggc 565
|||||||||||||||||||||||| |||||||||||||||| ||||||| | ||||||||
Sbjct: 91 gctacatcagcgagatcaacaagaacaacgcctactgcgactcgagcaacaagcagtggc 150
Query: 566 cgtgcgccgcggggcagaagtactacgggcgcggcccgctgcagatctcgtggaactaca 625
||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 151 cgtgcgccgcgggacagaagtactacgggcgcggcccgctgcaaatctcgtggaactaca 210
Query: 626 actacgggcccgcggggagggccatcggcttcgacgggctcggggaccccggcagggtgg 685
|||||||||| || |||| ||||||||||||| ||||||||| | |||| || |||||
Sbjct: 211 actacgggcctgccgggaaggccatcggcttcaacgggctcgcgaacccgaacaaggtgg 270
Query: 686 cgcgggacgccgtggtggcgttcaaggcggcgctctggttctggatgaacagcgtgcacg 745
||| |||||||||| | ||||||||| |||||||||||| ||||| ||||| ||||||||
Sbjct: 271 cgcaggacgccgtgatcgcgttcaagacggcgctctggtactggacgaacaacgtgcacg 330
Query: 746 gggtggtgccgcaggggttcggcgccaccaccagggccatcaacggcgccctcgagtgcg 805
||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 331 gggtgatgtcgcaggggttcggcgccaccatcagggccatcaacggcgccctcgagtgca 390
Query: 806 gcgggaacaaccccgcccagatgaacgcgcgcgtcggctactacaggcagtactgccgcc 865
||| || || | ||||||||||||||||| || |||||||||| |||||||||||| |
Sbjct: 391 acggcaagaatactgcccagatgaacgcgcgggtgggctactacaagcagtactgccggc 450
Query: 866 agctcggcgtcgaccccgggcccaacctcacctgctaggc 905
||||||||||||||||||||||||||||||| ||||||||
Sbjct: 451 agctcggcgtcgaccccgggcccaacctcacttgctaggc 490
Score = 67.9 bits (34), Expect = 2e-009
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 332 gcatcaagaaccaggccgggagcgggtgcgagggcaag 369
|||||||||||||||||| |||||||||||||||||||
Sbjct: 1 gcatcaagaaccaggccgcgagcgggtgcgagggcaag 38
>gb|AW680953.1|AW680953 WS1_9_A06.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 536
Score = 569 bits (287), Expect = e-160
Identities = 416/459 (90%)
Strand = Plus / Plus
Query: 447 gggcaagcgcgagatcgccgccttcttcgcgcacgccacgcacgagaccgggcatttctg 506
||||||||||||||||||||| |||||||| || | ||| ||||||||||||||||||||
Sbjct: 10 gggcaagcgcgagatcgccgctttcttcgcccatgtcacccacgagaccgggcatttctg 69
Query: 507 ctacatcagcgagatcaacaagagcaacgcctactgcgacccgagcaagaggcagtggcc 566
||||||||||||||||||||||| |||||||||||||||| ||||||| | |||||||||
Sbjct: 70 ctacatcagcgagatcaacaagaacaacgcctactgcgactcgagcaacaagcagtggcc 129
Query: 567 gtgcgccgcggggcagaagtactacgggcgcggcccgctgcagatctcgtggaactacaa 626
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 130 gtgcgccgcgggacagaagtactacgggcgcggcccgctgcaaatctcgtggaactacaa 189
Query: 627 ctacgggcccgcggggagggccatcggcttcgacgggctcggggaccccggcagggtggc 686
||||||||| || |||| ||||||||||||| ||||||||| | |||| || ||||||
Sbjct: 190 ctacgggcctgccgggaaggccatcggcttcaacgggctcgcgaacccgaacaaggtggc 249
Query: 687 gcgggacgccgtggtggcgttcaaggcggcgctctggttctggatgaacagcgtgcacgg 746
|| |||||||||| | ||||||||| |||||||||||| ||||| ||||| |||||||||
Sbjct: 250 gcaggacgccgtgatcgcgttcaagacggcgctctggtactggacgaacaacgtgcacgg 309
Query: 747 ggtggtgccgcaggggttcggcgccaccaccagggccatcaacggcgccctcgagtgcgg 806
|||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 310 ggtgatgtcgcaggggttcggcgccaccatcagggccatcaacggcgccctcgagtgcaa 369
Query: 807 cgggaacaaccccgcccagatgaacgcgcgcgtcggctactacaggcagtactgccgcca 866
||| || || | ||||||||||||||||| || |||||||||| |||||||||||| ||
Sbjct: 370 cggcaagaatactgcccagatgaacgcgcgggtgggctactacaagcagtactgccggca 429
Query: 867 gctcggcgtcgaccccgggcccaacctcacctgctaggc 905
|||||||||||||||||||||||||||||| ||||||||
Sbjct: 430 gctcggcgtcgaccccgggcccaacctcacttgctaggc 468
>gb|BE363714.1|BE363714 WS1_69_C06.g2_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 705
Score = 569 bits (287), Expect = e-160
Identities = 416/459 (90%)
Strand = Plus / Plus
Query: 447 gggcaagcgcgagatcgccgccttcttcgcgcacgccacgcacgagaccgggcatttctg 506
||||||||||||||||||||| |||||||| || | ||| ||||||||||||||||||||
Sbjct: 12 gggcaagcgcgagatcgccgctttcttcgcccatgtcacccacgagaccgggcatttctg 71
Query: 507 ctacatcagcgagatcaacaagagcaacgcctactgcgacccgagcaagaggcagtggcc 566
||||||||||||||||||||||| |||||||||||||||| ||||||| | |||||||||
Sbjct: 72 ctacatcagcgagatcaacaagaacaacgcctactgcgactcgagcaacaagcagtggcc 131
Query: 567 gtgcgccgcggggcagaagtactacgggcgcggcccgctgcagatctcgtggaactacaa 626
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 132 gtgcgccgcgggacagaagtactacgggcgcggcccgctgcaaatctcgtggaactacaa 191
Query: 627 ctacgggcccgcggggagggccatcggcttcgacgggctcggggaccccggcagggtggc 686
||||||||| || |||| ||||||||||||| ||||||||| | |||| || ||||||
Sbjct: 192 ctacgggcctgccgggaaggccatcggcttcaacgggctcgcgaacccgaacaaggtggc 251
Query: 687 gcgggacgccgtggtggcgttcaaggcggcgctctggttctggatgaacagcgtgcacgg 746
|| |||||||||| | ||||||||| |||||||||||| ||||| ||||| |||||||||
Sbjct: 252 gcaggacgccgtgatcgcgttcaagacggcgctctggtactggacgaacaacgtgcacgg 311
Query: 747 ggtggtgccgcaggggttcggcgccaccaccagggccatcaacggcgccctcgagtgcgg 806
|||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 312 ggtgatgtcgcaggggttcggcgccaccatcagggccatcaacggcgccctcgagtgcaa 371
Query: 807 cgggaacaaccccgcccagatgaacgcgcgcgtcggctactacaggcagtactgccgcca 866
||| || || | ||||||||||||||||| || |||||||||| |||||||||||| ||
Sbjct: 372 cggcaagaatactgcccagatgaacgcgcgggtgggctactacaagcagtactgccggca 431
Query: 867 gctcggcgtcgaccccgggcccaacctcacctgctaggc 905
|||||||||||||||||||||||||||||| ||||||||
Sbjct: 432 gctcggcgtcgaccccgggcccaacctcacttgctaggc 470
>gb|CD221995.1|CD221995 CCC1_1_C09.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_1_C09_A007 3', mRNA sequence
Length = 637
Score = 569 bits (287), Expect = e-160
Identities = 416/459 (90%)
Strand = Plus / Plus
Query: 447 gggcaagcgcgagatcgccgccttcttcgcgcacgccacgcacgagaccgggcatttctg 506
||||||||||||||||||||| |||||||| || | ||| ||||||||||||||||||||
Sbjct: 20 gggcaagcgcgagatcgccgctttcttcgcccatgtcacccacgagaccgggcatttctg 79
Query: 507 ctacatcagcgagatcaacaagagcaacgcctactgcgacccgagcaagaggcagtggcc 566
||||||||||||||||||||||| |||||||||||||||| ||||||| | |||||||||
Sbjct: 80 ctacatcagcgagatcaacaagaacaacgcctactgcgactcgagcaacaagcagtggcc 139
Query: 567 gtgcgccgcggggcagaagtactacgggcgcggcccgctgcagatctcgtggaactacaa 626
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 140 gtgcgccgcgggacagaagtactacgggcgcggcccgctgcaaatctcgtggaactacaa 199
Query: 627 ctacgggcccgcggggagggccatcggcttcgacgggctcggggaccccggcagggtggc 686
||||||||| || |||| ||||||||||||| ||||||||| | |||| || ||||||
Sbjct: 200 ctacgggcctgccgggaaggccatcggcttcaacgggctcgcgaacccgaacaaggtggc 259
Query: 687 gcgggacgccgtggtggcgttcaaggcggcgctctggttctggatgaacagcgtgcacgg 746
|| |||||||||| | ||||||||| |||||||||||| ||||| ||||| |||||||||
Sbjct: 260 gcaggacgccgtgatcgcgttcaagacggcgctctggtactggacgaacaacgtgcacgg 319
Query: 747 ggtggtgccgcaggggttcggcgccaccaccagggccatcaacggcgccctcgagtgcgg 806
|||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 320 ggtgatgtcgcaggggttcggcgccaccatcagggccatcaacggcgccctcgagtgcaa 379
Query: 807 cgggaacaaccccgcccagatgaacgcgcgcgtcggctactacaggcagtactgccgcca 866
||| || || | ||||||||||||||||| || |||||||||| |||||||||||| ||
Sbjct: 380 cggcaagaatactgcccagatgaacgcgcgggtgggctactacaagcagtactgccggca 439
Query: 867 gctcggcgtcgaccccgggcccaacctcacctgctaggc 905
|||||||||||||||||||||||||||||| ||||||||
Sbjct: 440 gctcggcgtcgaccccgggcccaacctcacttgctaggc 478
>gb|CD222353.1|CD222353 CCC1_21_F09.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_21_F09_A007 3', mRNA sequence
Length = 647
Score = 569 bits (287), Expect = e-160
Identities = 416/459 (90%)
Strand = Plus / Plus
Query: 447 gggcaagcgcgagatcgccgccttcttcgcgcacgccacgcacgagaccgggcatttctg 506
||||||||||||||||||||| |||||||| || | ||| ||||||||||||||||||||
Sbjct: 30 gggcaagcgcgagatcgccgctttcttcgcccatgtcacccacgagaccgggcatttctg 89
Query: 507 ctacatcagcgagatcaacaagagcaacgcctactgcgacccgagcaagaggcagtggcc 566
||||||||||||||||||||||| |||||||||||||||| ||||||| | |||||||||
Sbjct: 90 ctacatcagcgagatcaacaagaacaacgcctactgcgactcgagcaacaagcagtggcc 149
Query: 567 gtgcgccgcggggcagaagtactacgggcgcggcccgctgcagatctcgtggaactacaa 626
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 150 gtgcgccgcgggacagaagtactacgggcgcggcccgctgcaaatctcgtggaactacaa 209
Query: 627 ctacgggcccgcggggagggccatcggcttcgacgggctcggggaccccggcagggtggc 686
||||||||| || |||| ||||||||||||| ||||||||| | |||| || ||||||
Sbjct: 210 ctacgggcctgccgggaaggccatcggcttcaacgggctcgcgaacccgaacaaggtggc 269
Query: 687 gcgggacgccgtggtggcgttcaaggcggcgctctggttctggatgaacagcgtgcacgg 746
|| |||||||||| | ||||||||| |||||||||||| ||||| ||||| |||||||||
Sbjct: 270 gcaggacgccgtgatcgcgttcaagacggcgctctggtactggacgaacaacgtgcacgg 329
Query: 747 ggtggtgccgcaggggttcggcgccaccaccagggccatcaacggcgccctcgagtgcgg 806
|||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 330 ggtgatgtcgcaggggttcggcgccaccatcagggccatcaacggcgccctcgagtgcaa 389
Query: 807 cgggaacaaccccgcccagatgaacgcgcgcgtcggctactacaggcagtactgccgcca 866
||| || || | ||||||||||||||||| || |||||||||| |||||||||||| ||
Sbjct: 390 cggcaagaatactgcccagatgaacgcgcgggtgggctactacaagcagtactgccggca 449
Query: 867 gctcggcgtcgaccccgggcccaacctcacctgctaggc 905
|||||||||||||||||||||||||||||| ||||||||
Sbjct: 450 gctcggcgtcgaccccgggcccaacctcacttgctaggc 488
>gb|CD225895.1|CD225895 CCC1_42_B03.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_42_B03_A007 3', mRNA sequence
Length = 653
Score = 561 bits (283), Expect = e-158
Identities = 415/459 (90%)
Strand = Plus / Plus
Query: 447 gggcaagcgcgagatcgccgccttcttcgcgcacgccacgcacgagaccgggcatttctg 506
||||||||||||||||||||| |||||||| || | ||| ||||||||||||||||||||
Sbjct: 27 gggcaagcgcgagatcgccgctttcttcgcccatgtcacccacgagaccgggcatttctg 86
Query: 507 ctacatcagcgagatcaacaagagcaacgcctactgcgacccgagcaagaggcagtggcc 566
||||||||||||||||||||||| |||||||||||||||| ||||||| | |||||||||
Sbjct: 87 ctacatcagcgagatcaacaagaacaacgcctactgcgactcgagcaacaagcagtggcc 146
Query: 567 gtgcgccgcggggcagaagtactacgggcgcggcccgctgcagatctcgtggaactacaa 626
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 147 gtgcgccgcgggacagaagtactacgggcgcggcccgctgcaaatctcgtggaactacaa 206
Query: 627 ctacgggcccgcggggagggccatcggcttcgacgggctcggggaccccggcagggtggc 686
||||||||| || |||| ||||||||||||| ||||||||| | |||| || ||||||
Sbjct: 207 ctacgggcctgccgggaaggccatcggcttcaacgggctcgcgaacccgaacaaggtggc 266
Query: 687 gcgggacgccgtggtggcgttcaaggcggcgctctggttctggatgaacagcgtgcacgg 746
|| |||||||||| | ||||||||| |||||||||||| ||||| | ||| |||||||||
Sbjct: 267 gcaggacgccgtgatcgcgttcaagacggcgctctggtactggacggacaacgtgcacgg 326
Query: 747 ggtggtgccgcaggggttcggcgccaccaccagggccatcaacggcgccctcgagtgcgg 806
|||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 327 ggtgatgtcgcaggggttcggcgccaccatcagggccatcaacggcgccctcgagtgcaa 386
Query: 807 cgggaacaaccccgcccagatgaacgcgcgcgtcggctactacaggcagtactgccgcca 866
||| || || | ||||||||||||||||| || |||||||||| |||||||||||| ||
Sbjct: 387 cggcaagaatactgcccagatgaacgcgcgggtgggctactacaagcagtactgccggca 446
Query: 867 gctcggcgtcgaccccgggcccaacctcacctgctaggc 905
|||||||||||||||||||||||||||||| ||||||||
Sbjct: 447 gctcggcgtcgaccccgggcccaacctcacttgctaggc 485
>gb|AW924422.1|AW924422 WS1_69_C06.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 511
Score = 553 bits (279), Expect = e-155
Identities = 433/483 (89%), Gaps = 6/483 (1%)
Strand = Plus / Plus
Query: 322 ttcttcaacggcatcaagaaccaggccgggagcgggtgcgagggcaagaacttctacacc 381
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 21 ttcttcaacggcatcaagaaccaggccgcgagcgggtgcgagggcaagaacttctacacc 80
Query: 382 cggagcgcgttcctgagcgccgtcaaggcgtacccaggcttcgcccacggcgggtcgcag 441
|||| |||||||||||||||| ||| ||||| | |||||| |||||||||
Sbjct: 81 aggagtgcgttcctgagcgccgccaactcgtacaaaagcttcggt---ggcgggtcg--- 134
Query: 442 gtgcagggcaagcgcgagatcgccgccttcttcgcgcacgccacgcacgagaccgggcat 501
||| ||||||||||||||||||||| |||||||| || | ||| |||||||||||||||
Sbjct: 135 gtggcgggcaagcgcgagatcgccgctttcttcgcccatgtcacccacgagaccgggcat 194
Query: 502 ttctgctacatcagcgagatcaacaagagcaacgcctactgcgacccgagcaagaggcag 561
|||||||||||||||||||||||||||| |||||||||||||||| ||||||| | ||||
Sbjct: 195 ttctgctacatcagcgagatcaacaagaacaacgcctactgcgactcgagcaacaagcag 254
Query: 562 tggccgtgcgccgcggggcagaagtactacgggcgcggcccgctgcagatctcgtggaac 621
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 255 tggccgtgcgccgcgggacagaagtactacgggcgcggcccgctgcaaatctcgtggaac 314
Query: 622 tacaactacgggcccgcggggagggccatcggcttcgacgggctcggggaccccggcagg 681
|||||||||||||| || |||| ||||||||||||| ||||||||| | |||| || |
Sbjct: 315 tacaactacgggcctgccgggaaggccatcggcttcaacgggctcgcgaacccgaacaag 374
Query: 682 gtggcgcgggacgccgtggtggcgttcaaggcggcgctctggttctggatgaacagcgtg 741
||||||| |||||||||| | ||||||||| |||||||||||| ||||| ||||| ||||
Sbjct: 375 gtggcgcaggacgccgtgatcgcgttcaagacggcgctctggtactggacgaacaacgtg 434
Query: 742 cacggggtggtgccgcaggggttcggcgccaccaccagggccatcaacggcgccctcgag 801
||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 435 cacggggtgatgtcgcaggggttcggcgccaccatcagggccatcaacggcgccctcgag 494
Query: 802 tgc 804
|||
Sbjct: 495 tgc 497
>gb|AW746018.1|AW746018 WS1_38_H11.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 615
Score = 549 bits (277), Expect = e-154
Identities = 395/433 (91%), Gaps = 1/433 (0%)
Strand = Plus / Plus
Query: 483 cacgcacgagaccgggcatttctgctacatcagcgagatcaacaagagcaacgcctactg 542
||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 10 cacgcacgagaccggacatttctgctacatcagcgagatcaacaagaacaacgcctactg 69
Query: 543 cgacccgagcaagaggcagtggccgtgcgccgcggggcagaagtactacgggcgcggccc 602
|||| ||||||| |||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 70 cgactcgagcaacaggcagtggccgtgtgccgcgggtcagaagtactacgggcgcggccc 129
Query: 603 gctgcagatctcgtggaactacaactacgggcccgcggggagggccatcggcttcgacgg 662
|||||| |||||||||||||||||||||||||| || ||||||| |||||||||||||||
Sbjct: 130 gctgcaaatctcgtggaactacaactacgggcctgccgggagggacatcggcttcgacgg 189
Query: 663 gctcggggaccccggcagggtggcgcgggacgccgtggtggcgttcaaggcggcgctctg 722
||| || |||| | ||||||||||| |||||||||||| ||||||||| ||||||||||
Sbjct: 190 gcttcggaacccggacagggtggcgcaggacgccgtggtcgcgttcaagacggcgctctg 249
Query: 723 gttctggatgaacagcgtgcacggggtggtgccgcaggggttcggcgccaccaccagggc 782
|||||||| |||| ||||||||||||| || ||||||||||||||||||||| ||||||
Sbjct: 250 gttctggaccaacaacgtgcacggggtgatgtcgcaggggttcggcgccaccatcagggc 309
Query: 783 catcaacggcgccctcgagtgcggcgggaacaaccccgcccagatgaacgcgcgcgtcgg 842
|||||||||||||||||||||| ||| || || | ||||||||||||||||| || ||
Sbjct: 310 catcaacggcgccctcgagtgcaacggcaagaatactgcccagatgaacgcgcgggtggg 369
Query: 843 ctactacaggcagtactgccgccagctcggcgtcgaccccgggcccaacctcacctgcta 902
|||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||
Sbjct: 370 ctactacaggcagtactgccagcagctcggcgtcgaccccggacccaacctcacttgcta 429
Query: 903 ggctagctaggcg 915
|| ||||||||||
Sbjct: 430 gg-tagctaggcg 441
>gb|CD224094.1|CD224094 CCC1_32_C12.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_32_C12_A007 3', mRNA sequence
Length = 611
Score = 549 bits (277), Expect = e-154
Identities = 395/433 (91%), Gaps = 1/433 (0%)
Strand = Plus / Plus
Query: 483 cacgcacgagaccgggcatttctgctacatcagcgagatcaacaagagcaacgcctactg 542
||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 10 cacgcacgagaccggacatttctgctacatcagcgagatcaacaagaacaacgcctactg 69
Query: 543 cgacccgagcaagaggcagtggccgtgcgccgcggggcagaagtactacgggcgcggccc 602
|||| ||||||| |||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 70 cgactcgagcaacaggcagtggccgtgtgccgcgggtcagaagtactacgggcgcggccc 129
Query: 603 gctgcagatctcgtggaactacaactacgggcccgcggggagggccatcggcttcgacgg 662
|||||| |||||||||||||||||||||||||| || ||||||| |||||||||||||||
Sbjct: 130 gctgcaaatctcgtggaactacaactacgggcctgccgggagggacatcggcttcgacgg 189
Query: 663 gctcggggaccccggcagggtggcgcgggacgccgtggtggcgttcaaggcggcgctctg 722
||| || |||| | ||||||||||| |||||||||||| ||||||||| ||||||||||
Sbjct: 190 gcttcggaacccggacagggtggcgcaggacgccgtggtcgcgttcaagacggcgctctg 249
Query: 723 gttctggatgaacagcgtgcacggggtggtgccgcaggggttcggcgccaccaccagggc 782
|||||||| |||| ||||||||||||| || ||||||||||||||||||||| ||||||
Sbjct: 250 gttctggaccaacaacgtgcacggggtgatgtcgcaggggttcggcgccaccatcagggc 309
Query: 783 catcaacggcgccctcgagtgcggcgggaacaaccccgcccagatgaacgcgcgcgtcgg 842
|||||||||||||||||||||| ||| || || | ||||||||||||||||| || ||
Sbjct: 310 catcaacggcgccctcgagtgcaacggcaagaatactgcccagatgaacgcgcgggtggg 369
Query: 843 ctactacaggcagtactgccgccagctcggcgtcgaccccgggcccaacctcacctgcta 902
|||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||
Sbjct: 370 ctactacaggcagtactgccagcagctcggcgtcgaccccggacccaacctcacttgcta 429
Query: 903 ggctagctaggcg 915
|| ||||||||||
Sbjct: 430 gg-tagctaggcg 441
>gb|CD226332.1|CD226332 CCC1_45_F08.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_45_F08_A007 3', mRNA sequence
Length = 611
Score = 549 bits (277), Expect = e-154
Identities = 395/433 (91%), Gaps = 1/433 (0%)
Strand = Plus / Plus
Query: 483 cacgcacgagaccgggcatttctgctacatcagcgagatcaacaagagcaacgcctactg 542
||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 10 cacgcacgagaccggacatttctgctacatcagcgagatcaacaagaacaacgcctactg 69
Query: 543 cgacccgagcaagaggcagtggccgtgcgccgcggggcagaagtactacgggcgcggccc 602
|||| ||||||| |||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 70 cgactcgagcaacaggcagtggccgtgtgccgcgggtcagaagtactacgggcgcggccc 129
Query: 603 gctgcagatctcgtggaactacaactacgggcccgcggggagggccatcggcttcgacgg 662
|||||| |||||||||||||||||||||||||| || ||||||| |||||||||||||||
Sbjct: 130 gctgcaaatctcgtggaactacaactacgggcctgccgggagggacatcggcttcgacgg 189
Query: 663 gctcggggaccccggcagggtggcgcgggacgccgtggtggcgttcaaggcggcgctctg 722
||| || |||| | ||||||||||| |||||||||||| ||||||||| ||||||||||
Sbjct: 190 gcttcggaacccggacagggtggcgcaggacgccgtggtcgcgttcaagacggcgctctg 249
Query: 723 gttctggatgaacagcgtgcacggggtggtgccgcaggggttcggcgccaccaccagggc 782
|||||||| |||| ||||||||||||| || ||||||||||||||||||||| ||||||
Sbjct: 250 gttctggaccaacaacgtgcacggggtgatgtcgcaggggttcggcgccaccatcagggc 309
Query: 783 catcaacggcgccctcgagtgcggcgggaacaaccccgcccagatgaacgcgcgcgtcgg 842
|||||||||||||||||||||| ||| || || | ||||||||||||||||| || ||
Sbjct: 310 catcaacggcgccctcgagtgcaacggcaagaatactgcccagatgaacgcgcgggtggg 369
Query: 843 ctactacaggcagtactgccgccagctcggcgtcgaccccgggcccaacctcacctgcta 902
|||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||
Sbjct: 370 ctactacaggcagtactgccagcagctcggcgtcgaccccggacccaacctcacttgcta 429
Query: 903 ggctagctaggcg 915
|| ||||||||||
Sbjct: 430 gg-tagctaggcg 441
>gb|BG101749.1|BG101749 EM1_5_G10.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 519
Score = 543 bits (274), Expect = e-152
Identities = 458/518 (88%), Gaps = 6/518 (1%)
Strand = Plus / Plus
Query: 345 ggccgggagcgggtgcgagggcaagaacttctacacccggagcgcgttcctgagcgccgt 404
||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 8 ggccgcgagcgggtgcgagggcaagaacttctacaccaggagtgcgttcctgagcgccgc 67
Query: 405 caaggcgtacccaggcttcgcccacggcgggtcgcaggtgcagggcaagcgcgagatcgc 464
||| ||||| | |||||| ||||||||| ||| ||||||||||||||||||
Sbjct: 68 caactcgtacaaaagcttcggt---ggcgggtcg---gtggcgggcaagcgcgagatcgc 121
Query: 465 cgccttcttcgcgcacgccacgcacgagaccgggcatttctgctacatcagcgagatcaa 524
||| |||||||| || | ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 122 cgctttcttcgcccatgtcacccacgagaccgggcatttctgctacatcagcgagatcaa 181
Query: 525 caagagcaacgcctactgcgacccgagcaagaggcagtggccgtgcgccgcggggcagaa 584
||||| |||||||||||||||| ||||||| | ||||||||||||||||||||| |||||
Sbjct: 182 caagaacaacgcctactgcgactcgagcaacaagcagtggccgtgcgccgcgggacagaa 241
Query: 585 gtactacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcggggag 644
|||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||
Sbjct: 242 gtactacgggcgcggcccgctgcaaatctcgtggaactacaactacgggcctgccgggaa 301
Query: 645 ggccatcggcttcgacgggctcggggaccccggcagggtggcgcgggacgccgtggtggc 704
||||||||||||| ||||||||| | |||| || |||||||| |||||||||| | ||
Sbjct: 302 ggccatcggcttcaacgggctcgcgaacccgaacaaggtggcgcaggacgccgtgatcgc 361
Query: 705 gttcaaggcggcgctctggttctggatgaacagcgtgcacggggtggtgccgcaggggtt 764
||||||| |||||||||||| ||||| ||||| ||||||||||||| || ||||||||||
Sbjct: 362 gttcaagacggcgctctggtactggacgaacaacgtgcacggggtgatgtcgcaggggtt 421
Query: 765 cggcgccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaaccccgccca 824
||||||||||| |||||||||||||||||||||||||||| ||| || || | |||||
Sbjct: 422 cggcgccaccatcagggccatcaacggcgccctcgagtgcaacggcaagaatactgccca 481
Query: 825 gatgaacgcgcgcgtcggctactacaggcagtactgcc 862
|||||||||||| || |||||||||| |||||||||||
Sbjct: 482 gatgaacgcgcgggtgggctactacaagcagtactgcc 519
>gb|CX610007.1|CX610007 ANR1_16_C10.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_16_C10_A002 3', mRNA sequence
Length = 714
Score = 535 bits (270), Expect = e-150
Identities = 532/618 (86%), Gaps = 6/618 (0%)
Strand = Plus / Plus
Query: 292 gcgaacgtggctagcgtcgtcaccggctccttcttcaacggcatcaagaaccaggccggg 351
|||||||| | || ||||||||||| | | |||||||||||||||||||||||||||||
Sbjct: 45 gcgaacgtcggtaacgtcgtcaccgacgcgttcttcaacggcatcaagaaccaggccgga 104
Query: 352 agcgggtgcgagggcaagaacttctacacccggagcgcgttcctgagcgccgtca----- 406
|| ||||||||||||| ||||||||| | || ||||||||||||||| | ||
Sbjct: 105 agtgggtgcgagggcagcaacttctactcgcgcgacgcgttcctgagcgctgccagtgcc 164
Query: 407 ag-gcgtacccaggcttcgcccacggcgggtcgcaggtgcagggcaagcgcgagatcgcc 465
|| |||||| | ||||||||||| ||||| ||| ||| | ||||||||||||||||||
Sbjct: 165 agtgcgtactccggcttcgcccagggcggctcggaggacgacggcaagcgcgagatcgcc 224
Query: 466 gccttcttcgcgcacgccacgcacgagaccgggcatttctgctacatcagcgagatcaac 525
||||| ||||| |||||||| ||||||||||| |||||||||||||| ||||||||||||
Sbjct: 225 gcctttttcgctcacgccacacacgagaccggacatttctgctacattagcgagatcaac 284
Query: 526 aagagcaacgcctactgcgacccgagcaagaggcagtggccgtgcgccgcggggcagaag 585
||| |||||||||||| ||| ||||| | | |||||||||||||||||||||||||||
Sbjct: 285 aaggacaacgcctactgtgactcgagctacacacagtggccgtgcgccgcggggcagaag 344
Query: 586 tactacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcggggagg 645
|||||||| | ||||| |||||||||||||||||||||||||||||||| || || |
Sbjct: 345 tactacggaagaggccccctgcagatctcgtggaactacaactacgggccggcaggacag 404
Query: 646 gccatcggcttcgacgggctcggggaccccggcagggtggcgcgggacgccgtggtggcg 705
|||||||||||||||||||||| |||| | | ||||||| |||||||||| | |||
Sbjct: 405 agcatcggcttcgacgggctcgggaacccggacgccgtggcgcaggacgccgtgatcgcg 464
Query: 706 ttcaaggcggcgctctggttctggatgaacagcgtgcacggggtggtgccgcaggggttc 765
||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||
Sbjct: 465 ttcaaggcggcgctctggttctggatgaacaacgtgcacggggtgatgccacaggggttt 524
Query: 766 ggcgccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaaccccgcccag 825
|||||||||| ||| ||||| |||||||||||||||||| ||| ||||||||||| ||
Sbjct: 525 ggcgccaccatcagagccataaacggcgccctcgagtgcaacggaaacaaccccgcgcaa 584
Query: 826 atgaacgcgcgcgtcggctactacaggcagtactgccgccagctcggcgtcgaccccggg 885
||||||||||| || |||||||||| ||||||||||| ||| ||||||||||||| |||
Sbjct: 585 atgaacgcgcgggtgggctactacaagcagtactgccagcagttcggcgtcgacccgggg 644
Query: 886 cccaacctcacctgctag 903
||||||||||||||||
Sbjct: 645 agcaacctcacctgctag 662
>gb|CL160722.1|CL160722 104_351_10805186_116_31825_242 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10805186, DNA
sequence
Length = 711
Score = 523 bits (264), Expect = e-146
Identities = 379/416 (91%), Gaps = 1/416 (0%)
Strand = Plus / Plus
Query: 500 atttctgctacatcagcgagatcaacaagagcaacgcctactgcgacccgagcaagaggc 559
|||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||
Sbjct: 163 atttctgctacatcagcgagatcaacaagaacaacgcctactgcgactcgagcaacaggc 222
Query: 560 agtggccgtgcgccgcggggcagaagtactacgggcgcggcccgctgcagatctcgtgga 619
|||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 223 agtggccgtgtgccgcgggtcagaagtactacgggcgcggcccgctgcaaatctcgtgga 282
Query: 620 actacaactacgggcccgcggggagggccatcggcttcgacgggctcggggaccccggca 679
|||||||||||||||| || ||||||| |||||||||||||||||| || |||| | ||
Sbjct: 283 actacaactacgggcctgccgggagggacatcggcttcgacgggcttcggaacccggaca 342
Query: 680 gggtggcgcgggacgccgtggtggcgttcaaggcggcgctctggttctggatgaacagcg 739
||||||||| |||||||||||| ||||||||| |||||||||||||||||| |||| ||
Sbjct: 343 gggtggcgcaggacgccgtggtcgcgttcaagacggcgctctggttctggaccaacaacg 402
Query: 740 tgcacggggtggtgccgcaggggttcggcgccaccaccagggccatcaacggcgccctcg 799
||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 403 tgcacggggtgatgtcgcaggggttcggcgccaccatcagggccatcaacggcgccctcg 462
Query: 800 agtgcggcgggaacaaccccgcccagatgaacgcgcgcgtcggctactacaggcagtact 859
||||| ||| || || | ||||||||||||||||| || |||||||||||||||||||
Sbjct: 463 agtgcaacggcaagaatactgcccagatgaacgcgcgggtgggctactacaggcagtact 522
Query: 860 gccgccagctcggcgtcgaccccgggcccaacctcacctgctaggctagctaggcg 915
||| |||||||||||||||||||| ||||||||||| ||||||| ||||||||||
Sbjct: 523 gccagcagctcggcgtcgaccccggacccaacctcacttgctagg-tagctaggcg 577
>gb|CW365833.1|CW365833 fsbb001f038i18k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f038i18, DNA
sequence
Length = 831
Score = 523 bits (264), Expect = e-146
Identities = 379/416 (91%), Gaps = 1/416 (0%)
Strand = Plus / Plus
Query: 500 atttctgctacatcagcgagatcaacaagagcaacgcctactgcgacccgagcaagaggc 559
|||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||
Sbjct: 97 atttctgctacatcagcgagatcaacaagaacaacgcctactgcgactcgagcaacaggc 156
Query: 560 agtggccgtgcgccgcggggcagaagtactacgggcgcggcccgctgcagatctcgtgga 619
|||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 157 agtggccgtgtgccgcgggtcagaagtactacgggcgcggcccgctgcaaatctcgtgga 216
Query: 620 actacaactacgggcccgcggggagggccatcggcttcgacgggctcggggaccccggca 679
|||||||||||||||| || ||||||| |||||||||||||||||| || |||| | ||
Sbjct: 217 actacaactacgggcctgccgggagggacatcggcttcgacgggcttcggaacccggaca 276
Query: 680 gggtggcgcgggacgccgtggtggcgttcaaggcggcgctctggttctggatgaacagcg 739
||||||||| |||||||||||| ||||||||| |||||||||||||||||| |||| ||
Sbjct: 277 gggtggcgcaggacgccgtggtcgcgttcaagacggcgctctggttctggaccaacaacg 336
Query: 740 tgcacggggtggtgccgcaggggttcggcgccaccaccagggccatcaacggcgccctcg 799
||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 337 tgcacggggtgatgtcgcaggggttcggcgccaccatcagggccatcaacggcgccctcg 396
Query: 800 agtgcggcgggaacaaccccgcccagatgaacgcgcgcgtcggctactacaggcagtact 859
||||| ||| || || | ||||||||||||||||| || |||||||||||||||||||
Sbjct: 397 agtgcaacggcaagaatactgcccagatgaacgcgcgggtgggctactacaggcagtact 456
Query: 860 gccgccagctcggcgtcgaccccgggcccaacctcacctgctaggctagctaggcg 915
||| |||||||||||||||||||| ||||||||||| ||||||| ||||||||||
Sbjct: 457 gccagcagctcggcgtcgaccccggacccaacctcacttgctagg-tagctaggcg 511
Score = 48.1 bits (24), Expect = 0.002
Identities = 60/71 (84%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 1041 gaataatgaagcagctgtg--atatgcatgttgtttcgacacaacgtgtacgcttgcaca 1098
||||||||||||| |||| |||||||||||| |||| ||| ||||||| ||||| |
Sbjct: 668 gaataatgaagcaactgtattatatgcatgttgcctcgaaacagtgtgtacgattgcaga 727
Query: 1099 tcgcttgtact 1109
|||||||||||
Sbjct: 728 tcgcttgtact 738
>gb|CD464022.1|CD464022 ETH1_48_G10.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_48_G10_A002 3', mRNA sequence
Length = 690
Score = 521 bits (263), Expect = e-146
Identities = 380/419 (90%)
Strand = Plus / Plus
Query: 487 cacgagaccgggcatttctgctacatcagcgagatcaacaagagcaacgcctactgcgac 546
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 13 cacgagaccgggcatttctgctacatcagcgagatcaacaagaacaacgcctactgcgac 72
Query: 547 ccgagcaagaggcagtggccgtgcgccgcggggcagaagtactacgggcgcggcccgctg 606
||||||| | ||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 73 tcgagcaacaagcagtggccgtgcgccgcgggacagaagtactacgggcgcggcccactg 132
Query: 607 cagatctcgtggaactacaactacgggcccgcggggagggccatcggcttcgacgggctc 666
|| |||||||||||||||||||||||||| || |||| ||||||||||||| ||||||||
Sbjct: 133 caaatctcgtggaactacaactacgggcctgccgggaaggccatcggcttcaacgggctc 192
Query: 667 ggggaccccggcagggtggcgcgggacgccgtggtggcgttcaaggcggcgctctggttc 726
| | |||| || |||||||| |||||||||| | ||||||||| |||||||||||| |
Sbjct: 193 gcgaacccgaacaaggtggcgcaggacgccgtgatcgcgttcaagacggcgctctggtac 252
Query: 727 tggatgaacagcgtgcacggggtggtgccgcaggggttcggcgccaccaccagggccatc 786
|||| ||||| ||||||||||||| || ||||||||||||||||||||| ||||||||||
Sbjct: 253 tggacgaacaacgtgcacggggtgatgtcgcaggggttcggcgccaccatcagggccatc 312
Query: 787 aacggcgccctcgagtgcggcgggaacaaccccgcccagatgaacgcgcgcgtcggctac 846
|||||||||||||||||| ||| || || | ||||||||||||||||| || ||||||
Sbjct: 313 aacggcgccctcgagtgcaacggcaagaatactgcccagatgaacgcgcgggtgggctac 372
Query: 847 tacaggcagtactgccgccagctcggcgtcgaccccgggcccaacctcacctgctaggc 905
|||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 373 tacaagcagtactgccggcagctcggcgtcgaccccgggcccaacctcacttgctaggc 431
Score = 44.1 bits (22), Expect = 0.029
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 1126 tgcagcaagggtttaaaggctgaatcaataaacggtgt 1163
|||| ||||||||||||| || ||||||||||| ||||
Sbjct: 642 tgcatcaagggtttaaagactaaatcaataaacagtgt 679
>gb|AF402939.1|AF402939 Sorghum halepense chitinase-B gene, partial cds
Length = 922
Score = 515 bits (260), Expect = e-144
Identities = 368/404 (91%)
Strand = Plus / Plus
Query: 500 atttctgctacatcagcgagatcaacaagagcaacgcctactgcgacccgagcaagaggc 559
|||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||
Sbjct: 519 atttctgctacatcagcgagatcaacaagaacaacgcctactgcgactcgagcaacaggc 578
Query: 560 agtggccgtgcgccgcggggcagaagtactacgggcgcggcccgctgcagatctcgtgga 619
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 579 agtggccgtgcgccgcgggtcagaagtactacgggcgcggcccgctgcaaatctcgtgga 638
Query: 620 actacaactacgggcccgcggggagggccatcggcttcgacgggctcggggaccccggca 679
|||||||||||||||| || ||||||| |||||||||||||||||| || |||| | ||
Sbjct: 639 actacaactacgggcctgccgggagggacatcggcttcgacgggcttcggaacccggaca 698
Query: 680 gggtggcgcgggacgccgtggtggcgttcaaggcggcgctctggttctggatgaacagcg 739
||||||||| |||||||||| | ||||||||| |||||||||||||||||| |||| ||
Sbjct: 699 gggtggcgcaggacgccgtgatcgcgttcaagacggcgctctggttctggaccaacaacg 758
Query: 740 tgcacggggtggtgccgcaggggttcggcgccaccaccagggccatcaacggcgccctcg 799
||||||||||| || ||||||||||||| ||||||| ||| |||||||||||||||||||
Sbjct: 759 tgcacggggtgatgtcgcaggggttcggtgccaccatcagagccatcaacggcgccctcg 818
Query: 800 agtgcggcgggaacaaccccgcccagatgaacgcgcgcgtcggctactacaggcagtact 859
||||| |||||| || | ||||||||||| ||||| || |||||||||||||||||||
Sbjct: 819 agtgcaacgggaagaatactgcccagatgaatgcgcgggtgggctactacaggcagtact 878
Query: 860 gccgccagctcggcgtcgaccccgggcccaacctcacctgctag 903
||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 879 gccagcagctcggcgtcgaccccgggcccaacctcacctgctag 922
Score = 240 bits (121), Expect = 2e-061
Identities = 188/209 (89%), Gaps = 6/209 (2%)
Strand = Plus / Plus
Query: 289 ggtgcgaacgtggctagcgtcgtcaccggctccttcttcaacggcatcaagaaccaggcc 348
|||| ||||||||||||||| ||||||| | | |||||||||||||||||||||||||||
Sbjct: 178 ggtgggaacgtggctagcgttgtcaccgacgcattcttcaacggcatcaagaaccaggcc 237
Query: 349 gggagcgggtgcgagggcaagaacttctacacccggagcgcgttcctgagcgccgtcaag 408
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 238 gggaacgggtgcgagggcaagaacttctacacccggagcgcgttcctgagcgccgccgac 297
Query: 409 gcgtacccaggcttcgcccacggcgggtcgcaggtgcagggcaagcgcgagatcgccgcc 468
|||||| |||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 298 gcgtacaaaggcttcg---gtggcgggtc---ggtgcagggcaagcgcgagatcgccgcc 351
Query: 469 ttcttcgcgcacgccacgcacgagaccgg 497
|||||||| |||| |||||||||||||||
Sbjct: 352 ttcttcgcccacgtcacgcacgagaccgg 380
Score = 224 bits (113), Expect = 1e-056
Identities = 146/157 (92%)
Strand = Plus / Plus
Query: 102 ctggtgactctcgggctatcactcctctgcgctgtcgccggcccggccgccgcgcagaac 161
|||||| ||||||||||| ||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 1 ctggtggctctcgggctagcactcctctgcgctgccgccggcctggccgccgcgcagaac 60
Query: 162 tgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggcacgaccgacgag 221
|||||||||||| || |||||||||||||||||| |||||||||||||||||||||
Sbjct: 61 tgcggctgccaggcaggttactgctgcagcaagttcggttactgcggcacgaccgacgag 120
Query: 222 tactgcggcgacgggtgccagtcgggcccgtgccgct 258
|||||||||||||||||||||||||||||||||||||
Sbjct: 121 tactgcggcgacgggtgccagtcgggcccgtgccgct 157
>gb|CD220272.1|CD220272 CCC1_66_G11.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_66_G11_A007 3', mRNA sequence
Length = 614
Score = 513 bits (259), Expect = e-143
Identities = 379/419 (90%)
Strand = Plus / Plus
Query: 487 cacgagaccgggcatttctgctacatcagcgagatcaacaagagcaacgcctactgcgac 546
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 15 cacgagaccgggcatttctgctacatcagcgagatcaacaagaacaacgcctactgcgac 74
Query: 547 ccgagcaagaggcagtggccgtgcgccgcggggcagaagtactacgggcgcggcccgctg 606
||||||| | ||||||||| ||||||||||| ||||||||||||||||||||||||| |
Sbjct: 75 tcgagcaacaagcagtggccctgcgccgcgggacagaagtactacgggcgcggcccgccg 134
Query: 607 cagatctcgtggaactacaactacgggcccgcggggagggccatcggcttcgacgggctc 666
|| |||||||||||||||||||||||||| || |||| ||||||||||||| ||||||||
Sbjct: 135 caaatctcgtggaactacaactacgggcctgccgggaaggccatcggcttcaacgggctc 194
Query: 667 ggggaccccggcagggtggcgcgggacgccgtggtggcgttcaaggcggcgctctggttc 726
| | |||| || |||||||| |||||||||| | ||||||||| |||||||||||| |
Sbjct: 195 gcgaacccgaacaaggtggcgcaggacgccgtgatcgcgttcaagacggcgctctggtac 254
Query: 727 tggatgaacagcgtgcacggggtggtgccgcaggggttcggcgccaccaccagggccatc 786
|||| ||||| ||||||||||||| || ||||||||||||||||||||| ||||||||||
Sbjct: 255 tggacgaacaacgtgcacggggtgatgtcgcaggggttcggcgccaccatcagggccatc 314
Query: 787 aacggcgccctcgagtgcggcgggaacaaccccgcccagatgaacgcgcgcgtcggctac 846
|||||||||||||||||| ||| || || | ||||||||||||||||| || ||||||
Sbjct: 315 aacggcgccctcgagtgcaacggcaagaatactgcccagatgaacgcgcgggtgggctac 374
Query: 847 tacaggcagtactgccgccagctcggcgtcgaccccgggcccaacctcacctgctaggc 905
|||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 375 tacaagcagtactgccggcagctcggcgtcgaccccgggcccaacctcacttgctaggc 433
>gb|CD226807.1|CD226807 CCC1_48_C11.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_48_C11_A007 3', mRNA sequence
Length = 598
Score = 502 bits (253), Expect = e-140
Identities = 368/405 (90%), Gaps = 1/405 (0%)
Strand = Plus / Plus
Query: 511 atcagcgagatcaacaagagcaacgcctactgcgacccgagcaagaggcagtggccgtgc 570
||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||
Sbjct: 1 atcagcgagatcaacaagaacaacgcctactgcgactcgagcaacaggcagtggccgtgt 60
Query: 571 gccgcggggcagaagtactacgggcgcggcccgctgcagatctcgtggaactacaactac 630
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 61 gccgcgggtcagaagtactacgggcgcggcccgctgcaaatctcgtggaactacaactac 120
Query: 631 gggcccgcggggagggccatcggcttcgacgggctcggggaccccggcagggtggcgcgg 690
||||| || ||||||| |||||||||||||||||| || |||| | ||||||||||| |
Sbjct: 121 gggcctgccgggagggacatcggcttcgacgggcttcggaacccggacagggtggcgcag 180
Query: 691 gacgccgtggtggcgttcaaggcggcgctctggttctggatgaacagcgtgcacggggtg 750
||||||||||| ||||||||| |||||||||||||||||| |||| |||||||||||||
Sbjct: 181 gacgccgtggtcgcgttcaagacggcgctctggttctggaccaacaacgtgcacggggtg 240
Query: 751 gtgccgcaggggttcggcgccaccaccagggccatcaacggcgccctcgagtgcggcggg 810
|| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||
Sbjct: 241 atgtcgcaggggttcggcgccaccatcagggccatcaacggcgccctcgagtgcaacggc 300
Query: 811 aacaaccccgcccagatgaacgcgcgcgtcggctactacaggcagtactgccgccagctc 870
|| || | ||||||||||||||||| || |||||||||||||||||||||| ||||||
Sbjct: 301 aagaatactgcccagatgaacgcgcgggtgggctactacaggcagtactgccagcagctc 360
Query: 871 ggcgtcgaccccgggcccaacctcacctgctaggctagctaggcg 915
|||||||||||||| ||||||||||| ||||||| ||||||||||
Sbjct: 361 ggcgtcgaccccggacccaacctcacttgctagg-tagctaggcg 404
>gb|AW745819.1|AW745819 WS1_37_H11.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 590
Score = 494 bits (249), Expect = e-137
Identities = 376/417 (90%), Gaps = 1/417 (0%)
Strand = Plus / Plus
Query: 499 catttctgctacatcagcgagatcaacaagagcaacgcctactgcgacccgagcaagagg 558
||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||
Sbjct: 1 catttctgctacatcagcgagatcaccaagagcaacgcctactgcgactcgagcaacagg 60
Query: 559 cagtggccgtgcgccgcggggcagaagtactacgggcgcggcccgctgcagatctcgtgg 618
||||||||||| |||||||| |||||||||||||||| |||||||||||| |||||||||
Sbjct: 61 cagtggccgtgtgccgcgggtcagaagtactacgggcccggcccgctgcaaatctcgtgg 120
Query: 619 aactacaactacgggcccgcggggagggccatcggcttcgacgggctcggggaccccggc 678
||||||||||||||||| || ||||||| |||||||||||||||||| || |||| | |
Sbjct: 121 aactacaactacgggcctgccgggagggacatcggcttcgacgggcttcggaacccggac 180
Query: 679 agggtggcgcgggacgccgtggtggcgttcaaggcggcgctctggttctggatgaacagc 738
|||||||||| |||||||||||| |||||||| ||||||| |||||||||| |||| |
Sbjct: 181 agggtggcgcaggacgccgtggtcgcgttcaacccggcgctttggttctggaccaacaac 240
Query: 739 gtgcacggggtggtgccgcaggggttcggcgccaccaccagggccatcaacggcgccctc 798
|||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 241 gtgcacggggtgatgtcgcaggggttcggcgccaccatcagggccatcaacggcgccctc 300
Query: 799 gagtgcggcgggaacaaccccgcccagatgaacgcgcgcgtcggctactacaggcagtac 858
|||||| ||| || || | ||||||||||||||||| || || |||||||||||||||
Sbjct: 301 gagtgcaacggcaagaatactgcccagatgaacgcgcgggtgggttactacaggcagtac 360
Query: 859 tgccgccagctcggcgtcgaccccgggcccaacctcacctgctaggctagctaggcg 915
|||| |||||||||||||||||||| ||||||||||| ||||||| ||||||||||
Sbjct: 361 tgccagcagctcggcgtcgaccccggacccaacctcacttgctagg-tagctaggcg 416
>gb|AF402938.1|AF402938 Sorghum arundinaceum chitinase-B gene, partial cds
Length = 922
Score = 492 bits (248), Expect = e-137
Identities = 365/404 (90%)
Strand = Plus / Plus
Query: 500 atttctgctacatcagcgagatcaacaagagcaacgcctactgcgacccgagcaagaggc 559
|||||||||||||||||||||||||||||| | || ||||||| ||| ||||||||| ||
Sbjct: 519 atttctgctacatcagcgagatcaacaagaacgacccctactgtgacacgagcaagacgc 578
Query: 560 agtggccgtgcgccgcggggcagaagtactacgggcgcggcccgctgcagatctcgtgga 619
||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||
Sbjct: 579 agtggccgtgcgccgcgggacagaagtactacggacgcggcccgctgcaaatctcgtgga 638
Query: 620 actacaactacgggcccgcggggagggccatcggcttcgacgggctcggggaccccggca 679
|||||||||||||||| || |||| ||||||||||||| ||||||||| | |||| ||
Sbjct: 639 actacaactacgggcctgccgggaaggccatcggcttcaacgggctcgcgaacccgaaca 698
Query: 680 gggtggcgcgggacgccgtggtggcgttcaaggcggcgctctggttctggatgaacagcg 739
|||||||| |||||||||| | ||||||||| |||||||||||| ||||| ||||| ||
Sbjct: 699 aggtggcgcaggacgccgtgatcgcgttcaagacggcgctctggtactggacgaacaacg 758
Query: 740 tgcacggggtggtgccgcaggggttcggcgccaccaccagggccatcaacggcgccctcg 799
||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 759 tgcacggggtgatgtcgcaggggttcggcgccaccatcagggccatcaacggcgccctcg 818
Query: 800 agtgcggcgggaacaaccccgcccagatgaacgcgcgcgtcggctactacaggcagtact 859
||||| |||||| || | ||||||||||||||||| || |||||||||| ||||||||
Sbjct: 819 agtgcaacgggaagaatactgcccagatgaacgcgcgggtgggctactacaagcagtact 878
Query: 860 gccgccagctcggcgtcgaccccgggcccaacctcacctgctag 903
|||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 879 gccggcagctcggcgtcgaccccgggcccaacctcacctgctag 922
Score = 200 bits (101), Expect = 2e-049
Identities = 143/157 (91%)
Strand = Plus / Plus
Query: 102 ctggtgactctcgggctatcactcctctgcgctgtcgccggcccggccgccgcgcagaac 161
|||||| ||||||||||| ||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 1 ctggtggctctcgggctagcactcctctgcgctgccgccgtcccggccgccgcgcagaac 60
Query: 162 tgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggcacgaccgacgag 221
|||||||||||| || |||||||||||||||||| |||||||||||||| |||||
Sbjct: 61 tgcggctgccaggcaggttactgctgcagcaagttcggttactgcggcacgacggacgac 120
Query: 222 tactgcggcgacgggtgccagtcgggcccgtgccgct 258
||||| |||||||||||||||||||||||||||||||
Sbjct: 121 tactgtggcgacgggtgccagtcgggcccgtgccgct 157
Score = 174 bits (88), Expect = 1e-041
Identities = 182/212 (85%), Gaps = 6/212 (2%)
Strand = Plus / Plus
Query: 288 tggtgcgaacgtggctagcgtcgtcaccggctccttcttcaacggcatcaagaaccaggc 347
||||| |||||||| |||||| ||||||| | | ||||||||||||||||||||||||||
Sbjct: 180 tggtgggaacgtgggtagcgttgtcaccgacgcattcttcaacggcatcaagaaccaggc 239
Query: 348 cgggagcgggtgcgagggcaagaacttctacacccggagcgcgttcctgagcgccgtcaa 407
|| ||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||
Sbjct: 240 cgcgagcgggtgcgagggcaagaacttctacaccaggagtgcgttcctgagcgccgccaa 299
Query: 408 ggcgtacccaggcttcgcccacggcgggtcgcaggtgcagggcaagcgcgagatcgccgc 467
||||| | |||||| |||||||| |||| |||||||||||||||||||||
Sbjct: 300 ctcgtacaaaagcttcg---gtggcgggtc---ggtggcgggcaagcgcgagatcgccgc 353
Query: 468 cttcttcgcgcacgccacgcacgagaccgggc 499
|||||||| || | ||| |||||||||||||
Sbjct: 354 tttcttcgcccatgtcacccacgagaccgggc 385
>gb|AW922776.1|AW922776 DG1_46_C01.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 737
Score = 490 bits (247), Expect = e-136
Identities = 433/495 (87%)
Strand = Plus / Plus
Query: 409 gcgtacccaggcttcgcccacggcgggtcgcaggtgcagggcaagcgcgagatcgccgcc 468
|||||| | ||||||||||| ||||| ||| ||| | |||||||||||||||||||||
Sbjct: 40 gcgtactccggcttcgcccagggcggctcggaggacgacggcaagcgcgagatcgccgcc 99
Query: 469 ttcttcgcgcacgccacgcacgagaccgggcatttctgctacatcagcgagatcaacaag 528
|||||||| |||||||| ||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 100 ttcttcgctcacgccacacacgagaccggacatttctgctacattagcgagatcaacaag 159
Query: 529 agcaacgcctactgcgacccgagcaagaggcagtggccgtgcgccgcggggcagaagtac 588
|||||||||||| ||| ||||| | | ||||||||||||||||||||||||||||||
Sbjct: 160 gacaacgcctactgtgactcgagctacacacagtggccgtgcgccgcggggcagaagtac 219
Query: 589 tacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcggggagggcc 648
||||| | ||||| |||||||||||||||||||||||||||||||| || || | |
Sbjct: 220 tacggaagaggccccctgcagatctcgtggaactacaactacgggccggcaggacagagc 279
Query: 649 atcggcttcgacgggctcggggaccccggcagggtggcgcgggacgccgtggtggcgttc 708
||||||||||||||||||||| |||| | | ||||||| |||||||||| | ||||||
Sbjct: 280 atcggcttcgacgggctcgggaacccggacgccgtggcgcaggacgccgtgatcgcgttc 339
Query: 709 aaggcggcgctctggttctggatgaacagcgtgcacggggtggtgccgcaggggttcggc 768
|||||||||||||||||||||||||||| ||||||||||||| |||| |||||||| |||
Sbjct: 340 aaggcggcgctctggttctggatgaacaacgtgcacggggtgatgccacaggggtttggc 399
Query: 769 gccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaaccccgcccagatg 828
||||||| ||| ||||| |||||||||||||||||| ||| ||||||||||| || |||
Sbjct: 400 gccaccatcagagccataaacggcgccctcgagtgcaacggaaacaaccccgcgcaaatg 459
Query: 829 aacgcgcgcgtcggctactacaggcagtactgccgccagctcggcgtcgaccccgggccc 888
|||||||| || |||||||||| ||||||||||| ||| ||||||||||||| ||| |
Sbjct: 460 aacgcgcgggtgggctactacaagcagtactgccagcagttcggcgtcgacccggggagc 519
Query: 889 aacctcacctgctag 903
|||||||||||||||
Sbjct: 520 aacctcacctgctag 534
>gb|CD228493.1|CD228493 CCC1_8_E11.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_8_E11_A007 3', mRNA sequence
Length = 591
Score = 488 bits (246), Expect = e-136
Identities = 361/398 (90%), Gaps = 1/398 (0%)
Strand = Plus / Plus
Query: 518 agatcaacaagagcaacgcctactgcgacccgagcaagaggcagtggccgtgcgccgcgg 577
|||||||||||| |||||||||||||||| ||||||| |||||||||||||| |||||||
Sbjct: 1 agatcaacaagaacaacgcctactgcgactcgagcaacaggcagtggccgtgtgccgcgg 60
Query: 578 ggcagaagtactacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccg 637
| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 61 gtcagaagtactacgggcgcggcccgctgcaaatctcgtggaactacaactacgggcctg 120
Query: 638 cggggagggccatcggcttcgacgggctcggggaccccggcagggtggcgcgggacgccg 697
| ||||||| |||||||||||||||||| || |||| | ||||||||||| ||||||||
Sbjct: 121 ccgggagggacatcggcttcgacgggcttcggaacccggacagggtggcgcaggacgccg 180
Query: 698 tggtggcgttcaaggcggcgctctggttctggatgaacagcgtgcacggggtggtgccgc 757
|||| ||||||||| |||||||||||||||||| |||| ||||||||||||| || |||
Sbjct: 181 tggtcgcgttcaagacggcgctctggttctggaccaacaacgtgcacggggtgatgtcgc 240
Query: 758 aggggttcggcgccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaacc 817
|||||||||||||||||| |||||||||||||||||||||||||||| ||| || ||
Sbjct: 241 aggggttcggcgccaccatcagggccatcaacggcgccctcgagtgcaacggcaagaata 300
Query: 818 ccgcccagatgaacgcgcgcgtcggctactacaggcagtactgccgccagctcggcgtcg 877
| ||||||||||||||||| || |||||||||||||||||||||| |||||||||||||
Sbjct: 301 ctgcccagatgaacgcgcgggtgggctactacaggcagtactgccagcagctcggcgtcg 360
Query: 878 accccgggcccaacctcacctgctaggctagctaggcg 915
||||||| ||||||||||| ||||||| ||||||||||
Sbjct: 361 accccggacccaacctcacttgctagg-tagctaggcg 397
>gb|CW302450.1|CW302450 104_786_11464725_116_35662_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11464725, DNA
sequence
Length = 642
Score = 482 bits (243), Expect = e-134
Identities = 347/382 (90%)
Strand = Plus / Plus
Query: 500 atttctgctacatcagcgagatcaacaagagcaacgcctactgcgacccgagcaagaggc 559
|||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||
Sbjct: 261 atttctgctacatcagcgagatcaacaagaacaacgcctactgcgactcgagcaacaggc 320
Query: 560 agtggccgtgcgccgcggggcagaagtactacgggcgcggcccgctgcagatctcgtgga 619
|||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 agtggccgtgtgccgcgggtcagaagtactacgggcgcggcccgctgcaaatctcgtgga 380
Query: 620 actacaactacgggcccgcggggagggccatcggcttcgacgggctcggggaccccggca 679
|||||||||||||||| || ||||||| |||||||||||||||||| || |||| | ||
Sbjct: 381 actacaactacgggcctgccgggagggacatcggcttcgacgggcttcggaacccggaca 440
Query: 680 gggtggcgcgggacgccgtggtggcgttcaaggcggcgctctggttctggatgaacagcg 739
||||||||| |||||||||||| ||||||||| |||||||||||||||||| |||| ||
Sbjct: 441 gggtggcgcaggacgccgtggtcgcgttcaagacggcgctctggttctggaccaacaacg 500
Query: 740 tgcacggggtggtgccgcaggggttcggcgccaccaccagggccatcaacggcgccctcg 799
||||||| ||| || ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 501 tgcacggngtgatgtcgcaggggttcggcgccaccatcagggccatcaacggcgccctcg 560
Query: 800 agtgcggcgggaacaaccccgcccagatgaacgcgcgcgtcggctactacaggcagtact 859
||||| ||| || || | ||||||||||||||||| || |||||||||||||||||||
Sbjct: 561 agtgcaacggcaagaatactgcccagatgaacgcgcgggtgggctactacaggcagtact 620
Query: 860 gccgccagctcggcgtcgaccc 881
||| |||||||||||||||||
Sbjct: 621 gccagcagctcggcgtcgaccc 642
Score = 89.7 bits (45), Expect = 6e-016
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 441 ggtgcagggcaagcgcgagatcgccgccttcttcgcgcacgccacgcacgagaccgg 497
|||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 53 ggtgcagggcaagcgcgagatcgccgccttcttcgcccacatcacgcacgagaccgg 109
>gb|CX613448.1|CX613448 GABR1_8_E12.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_8_E12_A002 3', mRNA sequence
Length = 722
Score = 482 bits (243), Expect = e-134
Identities = 432/495 (87%)
Strand = Plus / Plus
Query: 409 gcgtacccaggcttcgcccacggcgggtcgcaggtgcagggcaagcgcgagatcgccgcc 468
|||||| | ||||||||||| ||||| ||| ||| | |||||||||||||||||||||
Sbjct: 18 gcgtactccggcttcgcccagggcggctcggaggacgacggcaagcgcgagatcgccgcc 77
Query: 469 ttcttcgcgcacgccacgcacgagaccgggcatttctgctacatcagcgagatcaacaag 528
|| ||||| |||||||| ||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 78 tttttcgctcacgccacacacgagaccggacatttctgctacattagcgagatcaacaag 137
Query: 529 agcaacgcctactgcgacccgagcaagaggcagtggccgtgcgccgcggggcagaagtac 588
|||||||||||| ||| ||||| | | ||||||||||||||||||||||||||||||
Sbjct: 138 gacaacgcctactgtgactcgagctacacacagtggccgtgcgccgcggggcagaagtac 197
Query: 589 tacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcggggagggcc 648
||||| | ||||| |||||||||||||||||||||||||||||||| || || | |
Sbjct: 198 tacggaagaggccccctgcagatctcgtggaactacaactacgggccggcaggacagagc 257
Query: 649 atcggcttcgacgggctcggggaccccggcagggtggcgcgggacgccgtggtggcgttc 708
||||||||||||||||||||| |||| | | ||||||| |||||||||| | ||||||
Sbjct: 258 atcggcttcgacgggctcgggaacccggacgccgtggcgcaggacgccgtgatcgcgttc 317
Query: 709 aaggcggcgctctggttctggatgaacagcgtgcacggggtggtgccgcaggggttcggc 768
|||||||||||||||||||||||||||| ||||||||||||| |||| |||||||| |||
Sbjct: 318 aaggcggcgctctggttctggatgaacaacgtgcacggggtgatgccacaggggtttggc 377
Query: 769 gccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaaccccgcccagatg 828
||||||| ||| ||||| |||||||||||||||||| ||| ||||||||||| || |||
Sbjct: 378 gccaccatcagagccataaacggcgccctcgagtgcaacggaaacaaccccgcgcaaatg 437
Query: 829 aacgcgcgcgtcggctactacaggcagtactgccgccagctcggcgtcgaccccgggccc 888
|||||||| || |||||||||| ||||||||||| ||| ||||||||||||| ||| |
Sbjct: 438 aacgcgcgggtgggctactacaagcagtactgccagcagttcggcgtcgacccggggagc 497
Query: 889 aacctcacctgctag 903
|||||||||||||||
Sbjct: 498 aacctcacctgctag 512
>gb|AW922735.1|AW922735 DG1_45_B06.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 645
Score = 476 bits (240), Expect = e-132
Identities = 360/400 (90%)
Strand = Plus / Plus
Query: 506 gctacatcagcgagatcaacaagagcaacgcctactgcgacccgagcaagaggcagtggc 565
|||||||||||||||||||||||| |||||| ||||||||| ||||||| | ||||||||
Sbjct: 1 gctacatcagcgagatcaacaagaacaacgcttactgcgactcgagcaacaagcagtggc 60
Query: 566 cgtgcgccgcggggcagaagtactacgggcgcggcccgctgcagatctcgtggaactaca 625
||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 61 cgtgcgccgcgggacagaagtactacgggcgcggcccgctgcaaatctcgtggaactaca 120
Query: 626 actacgggcccgcggggagggccatcggcttcgacgggctcggggaccccggcagggtgg 685
|||||||||| || |||| ||||||||||||| ||||||||| |||| || |||||
Sbjct: 121 actacgggcctgccgggaaggccatcggcttcaacgggctcgcaaacccgaacaaggtgg 180
Query: 686 cgcgggacgccgtggtggcgttcaaggcggcgctctggttctggatgaacagcgtgcacg 745
||| |||||||||| | ||||||||| |||||||||||| ||||| ||||| ||||||||
Sbjct: 181 cgcaggacgccgtgatcgcgttcaagacggcgctctggtactggacgaacaacgtgcacg 240
Query: 746 gggtggtgccgcaggggttcggcgccaccaccagggccatcaacggcgccctcgagtgcg 805
||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 241 gggtgatgtcgcaggggttcggcgccaccatcagggccatcaacggcgccctcgagtgca 300
Query: 806 gcgggaacaaccccgcccagatgaacgcgcgcgtcggctactacaggcagtactgccgcc 865
||| || || | ||||||||||||||||| || |||||||||| |||||||||||| |
Sbjct: 301 acggcaagaatactgcccagatgaacgcgcgggtgggctactacaagcagtactgccggc 360
Query: 866 agctcggcgtcgaccccgggcccaacctcacctgctaggc 905
||||||||||||||||||||||||||||||| ||||||||
Sbjct: 361 agctcggcgtcgaccccgggcccaacctcacttgctaggc 400
Score = 42.1 bits (21), Expect = 0.12
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 1126 tgcagcaagggtttaaaggctgaatcaataaac 1158
|||| ||||||||||||| || |||||||||||
Sbjct: 611 tgcatcaagggtttaaagactaaatcaataaac 643
>gb|CN151360.1|CN151360 WOUND1_75_B02.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_75_B02_A002 3', mRNA sequence
Length = 715
Score = 476 bits (240), Expect = e-132
Identities = 433/496 (87%), Gaps = 1/496 (0%)
Strand = Plus / Plus
Query: 409 gcgtacccaggcttcgcccacggcgggtcgcaggtgcagggcaagcgcgagatcgccgcc 468
|||||| | ||||||||||| ||||| ||| ||| | |||||||||||||||||||||
Sbjct: 15 gcgtactccggcttcgcccagggcggctcggaggacgacggcaagcgcgagatcgccgcc 74
Query: 469 -ttcttcgcgcacgccacgcacgagaccgggcatttctgctacatcagcgagatcaacaa 527
|||||||| |||||||| ||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 75 gttcttcgctcacgccacacacgagaccggacatttctgctacattagcgagatcaacaa 134
Query: 528 gagcaacgcctactgcgacccgagcaagaggcagtggccgtgcgccgcggggcagaagta 587
| |||||||||||| ||| ||||| | | |||||||||||||||||||||||||||||
Sbjct: 135 ggacaacgcctactgtgactcgagctacacacagtggccgtgcgccgcggggcagaagta 194
Query: 588 ctacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcggggagggc 647
|||||| | ||||| |||||||||||||||||||||||||||||||| || || |
Sbjct: 195 ctacggaagaggccccctgcagatctcgtggaactacaactacgggccggcaggacagag 254
Query: 648 catcggcttcgacgggctcggggaccccggcagggtggcgcgggacgccgtggtggcgtt 707
|||||||||||||||||||||| |||| | | ||||||| |||||||||| | |||||
Sbjct: 255 catcggcttcgacgggctcgggaacccggacgccgtggcgcaggacgccgtgatcgcgtt 314
Query: 708 caaggcggcgctctggttctggatgaacagcgtgcacggggtggtgccgcaggggttcgg 767
||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||| ||
Sbjct: 315 caaggcggcgctctggttctggatgaacaacgtgcacggggtgatgccacaggggtttgg 374
Query: 768 cgccaccaccagggccatcaacggcgccctcgagtgcggcgggaacaaccccgcccagat 827
|||||||| ||| ||||| |||||||||||||||||| ||| ||||||||||| || ||
Sbjct: 375 cgccaccatcagagccataaacggcgccctcgagtgcaacggaaacaaccccgcgcaaat 434
Query: 828 gaacgcgcgcgtcggctactacaggcagtactgccgccagctcggcgtcgaccccgggcc 887
||||||||| || |||||||||| ||||||||||| ||| ||||||||||||| |||
Sbjct: 435 gaacgcgcgggtgggctactacaagcagtactgccagcagttcggcgtcgacccggggag 494
Query: 888 caacctcacctgctag 903
||||||||||||||||
Sbjct: 495 caacctcacctgctag 510
>gb|CD227445.1|CD227445 CCC1_51_E06.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_51_E06_A007 5', mRNA sequence
Length = 657
Score = 468 bits (236), Expect = e-130
Identities = 360/400 (90%), Gaps = 6/400 (1%)
Strand = Plus / Plus
Query: 289 ggtgcgaacgtggctagcgtcgtcaccggctccttcttcaacggcatcaagaaccaggcc 348
|||| |||||||||| |||| ||||||| | | ||||||||| |||||||||||||||||
Sbjct: 264 ggtgggaacgtggctggcgttgtcaccgacgcattcttcaacagcatcaagaaccaggcc 323
Query: 349 gggagcgggtgcgagggcaagaacttctacacccggagcgcgttcctgagcgccgtcaag 408
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 324 gggaacgggtgcgagggcaagaacttctacacccggagcgcgttcctgagcgccgccgac 383
Query: 409 gcgtacccaggcttcgcccacggcgggtcgcaggtgcagggcaagcgcgagatcgccgcc 468
|||||| |||||||| ||| ||||| |||||||||||||||||||||||||||
Sbjct: 384 gcgtacaaaggcttcggt---ggcaggtcg---gtgcagggcaagcgcgagatcgccgcc 437
Query: 469 ttcttcgcgcacgccacgcacgagaccgggcatttctgctacatcagcgagatcaacaag 528
|||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 438 ttcttcgcccacatcacgcacgagaccggacatttctgctacatcagcgagatcaacaag 497
Query: 529 agcaacgcctactgcgacccgagcaagaggcagtggccgtgcgccgcggggcagaagtac 588
| |||||||||||||||| ||||||| |||||||||||||| |||||||| |||||||||
Sbjct: 498 aacaacgcctactgcgactcgagcaacaggcagtggccgtgtgccgcgggtcagaagtac 557
Query: 589 tacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcggggagggcc 648
|||||||||||||||||||| |||||||||||||||||||||||||| || ||||||| |
Sbjct: 558 tacgggcgcggcccgctgcaaatctcgtggaactacaactacgggcctgccgggagggac 617
Query: 649 atcggcttcgacgggctcggggaccccggcagggtggcgc 688
||||||||||||||||| || |||| | |||||||||||
Sbjct: 618 atcggcttcgacgggcttcggaacccggacagggtggcgc 657
Score = 167 bits (84), Expect = 3e-039
Identities = 105/112 (93%)
Strand = Plus / Plus
Query: 147 gccgccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgc 206
||||||||||||||||||||||||||| || |||||||||||||||||| ||||||
Sbjct: 132 gccgccgcgcagaactgcggctgccaggcaggttactgctgcagcaagttcggttactgc 191
Query: 207 ggcacgaccgacgagtactgcggcgacgggtgccagtcgggcccgtgccgct 258
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 ggcacgaccgacgagtactgcggcgacgggtgccagtcgggcccgtgccgct 243
Score = 42.1 bits (21), Expect = 0.12
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 109 ctctcgggctatcactcctctgcgctgtcgccg 141
||||||| ||| ||||||||||||||| |||||
Sbjct: 106 ctctcggcctagcactcctctgcgctgccgccg 138
>gb|AY048375.1| Sorghum bicolor chitinase-B gene, partial cds
Length = 927
Score = 468 bits (236), Expect = e-130
Identities = 362/404 (89%)
Strand = Plus / Plus
Query: 500 atttctgctacatcagcgagatcaacaagagcaacgcctactgcgacccgagcaagaggc 559
|||||||||||||||||||||||||||||| | |||||||||||||| ||||||||| ||
Sbjct: 524 atttctgctacatcagcgagatcaacaagaacgacgcctactgcgactcgagcaagacgc 583
Query: 560 agtggccgtgcgccgcggggcagaagtactacgggcgcggcccgctgcagatctcgtgga 619
||||||||||||||||||| |||||||||||||| |||||||||||| | || ||||||
Sbjct: 584 agtggccgtgcgccgcgggacagaagtactacggacgcggcccgctgaaaatttcgtggg 643
Query: 620 actacaactacgggcccgcggggagggccatcggcttcgacgggctcggggaccccggca 679
|||||||||||||||| || |||| || |||||||||| ||||||||| | |||| ||
Sbjct: 644 actacaactacgggcctgccgggaagggcatcggcttcaacgggctcgcgaacccgaaca 703
Query: 680 gggtggcgcgggacgccgtggtggcgttcaaggcggcgctctggttctggatgaacagcg 739
|||||||| |||||||||| | ||||||||| |||||||||||| ||||| ||||| ||
Sbjct: 704 aggtggcgcaggacgccgtgatcgcgttcaagacggcgctctggtactggacgaacaacg 763
Query: 740 tgcacggggtggtgccgcaggggttcggcgccaccaccagggccatcaacggcgccctcg 799
||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 764 tgcacggggtgatgtcgcaggggttcggcgccaccatcagggccatcaacggcgccctcg 823
Query: 800 agtgcggcgggaacaaccccgcccagatgaacgcgcgcgtcggctactacaggcagtact 859
||||| ||| || || | ||||||||||||||||| || |||||||||| ||||||||
Sbjct: 824 agtgcaacggcaagaatactgcccagatgaacgcgcgggtgggctactacaagcagtact 883
Query: 860 gccgccagctcggcgtcgaccccgggcccaacctcacctgctag 903
|||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 884 gccggcagctcggcgtcgaccccgggcccaacctcacctgctag 927
Score = 200 bits (101), Expect = 2e-049
Identities = 143/157 (91%)
Strand = Plus / Plus
Query: 102 ctggtgactctcgggctatcactcctctgcgctgtcgccggcccggccgccgcgcagaac 161
|||||| ||||||||||| ||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 1 ctggtggctctcgggctagcactcctctgcgctgccgccgtcccggccgccgcgcagaac 60
Query: 162 tgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggcacgaccgacgag 221
|||||||||||| || |||||||||||||||||| |||||||||||||| |||||
Sbjct: 61 tgcggctgccaggcaggttactgctgcagcaagttcggttactgcggcacgacggacgac 120
Query: 222 tactgcggcgacgggtgccagtcgggcccgtgccgct 258
||||| |||||||||||||||||||||||||||||||
Sbjct: 121 tactgtggcgacgggtgccagtcgggcccgtgccgct 157
Score = 174 bits (88), Expect = 1e-041
Identities = 182/212 (85%), Gaps = 6/212 (2%)
Strand = Plus / Plus
Query: 288 tggtgcgaacgtggctagcgtcgtcaccggctccttcttcaacggcatcaagaaccaggc 347
||||| |||||||| |||||| ||||||| | | ||||||||||||||||||||||||||
Sbjct: 180 tggtgggaacgtgggtagcgttgtcaccgacgcattcttcaacggcatcaagaaccaggc 239
Query: 348 cgggagcgggtgcgagggcaagaacttctacacccggagcgcgttcctgagcgccgtcaa 407
|| ||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||
Sbjct: 240 cgcgagcgggtgcgagggcaagaacttctacaccaggagtgcgttcctgagcgccgccaa 299
Query: 408 ggcgtacccaggcttcgcccacggcgggtcgcaggtgcagggcaagcgcgagatcgccgc 467
||||| | |||||| |||||||| |||| |||||||||||||||||||||
Sbjct: 300 ctcgtacaaaagcttcg---gtggcgggtc---ggtggcgggcaagcgcgagatcgccgc 353
Query: 468 cttcttcgcgcacgccacgcacgagaccgggc 499
|||||||| || | ||| |||||||||||||
Sbjct: 354 tttcttcgcccatgtcacccacgagaccgggc 385
>gb|CD222724.1|CD222724 CCC1_23_G10.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_23_G10_A007 5', mRNA sequence
Length = 635
Score = 462 bits (233), Expect = e-128
Identities = 342/377 (90%), Gaps = 6/377 (1%)
Strand = Plus / Plus
Query: 289 ggtgcgaacgtggctagcgtcgtcaccggctccttcttcaacggcatcaagaaccaggcc 348
|||| |||||||||| |||| ||||||| | | ||||||||| |||||||||||||||||
Sbjct: 263 ggtgggaacgtggctggcgttgtcaccgacgcattcttcaacagcatcaagaaccaggcc 322
Query: 349 gggagcgggtgcgagggcaagaacttctacacccggagcgcgttcctgagcgccgtcaag 408
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 323 gggaacgggtgcgagggcaagaacttctacacccggagcgcgttcctgagcgccgccgac 382
Query: 409 gcgtacccaggcttcgcccacggcgggtcgcaggtgcagggcaagcgcgagatcgccgcc 468
|||||| ||||||| | ||| ||||| |||||||||||||||||||||||||||
Sbjct: 383 gcgtacaaaggcttc---cgtggcaggtcg---gtgcagggcaagcgcgagatcgccgcc 436
Query: 469 ttcttcgcgcacgccacgcacgagaccgggcatttctgctacatcagcgagatcaacaag 528
|||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 437 ttcttcgcccacatcacgcacgagaccggacatttctgctacatcagcgagatcaacaag 496
Query: 529 agcaacgcctactgcgacccgagcaagaggcagtggccgtgcgccgcggggcagaagtac 588
| |||||||||||||||| ||||||| |||||||||||||| |||||||| |||||||||
Sbjct: 497 aacaacgcctactgcgactcgagcaacaggcagtggccgtgtgccgcgggtcagaagtac 556
Query: 589 tacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcggggagggcc 648
|||||||||||||||||||| |||||||||||||||||||||||||| || ||||||| |
Sbjct: 557 tacgggcgcggcccgctgcaaatctcgtggaactacaactacgggcctgccgggagggac 616
Query: 649 atcggcttcgacgggct 665
|||||||||||||||||
Sbjct: 617 atcggcttcgacgggct 633
Score = 167 bits (84), Expect = 3e-039
Identities = 105/112 (93%)
Strand = Plus / Plus
Query: 147 gccgccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgc 206
||||||||||||||||||||||||||| || |||||||||||||||||| ||||||
Sbjct: 131 gccgccgcgcagaactgcggctgccaggcaggttactgctgcagcaagttcggttactgc 190
Query: 207 ggcacgaccgacgagtactgcggcgacgggtgccagtcgggcccgtgccgct 258
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 ggcacgaccgacgagtactgcggcgacgggtgccagtcgggcccgtgccgct 242
Score = 42.1 bits (21), Expect = 0.12
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 109 ctctcgggctatcactcctctgcgctgtcgccg 141
||||||| ||| ||||||||||||||| |||||
Sbjct: 105 ctctcggcctagcactcctctgcgctgccgccg 137
>gb|CD226424.1|CD226424 CCC1_45_F08.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_45_F08_A007 5', mRNA sequence
Length = 645
Score = 462 bits (233), Expect = e-128
Identities = 342/377 (90%), Gaps = 6/377 (1%)
Strand = Plus / Plus
Query: 289 ggtgcgaacgtggctagcgtcgtcaccggctccttcttcaacggcatcaagaaccaggcc 348
|||| |||||||||| |||| ||||||| | | ||||||||| |||||||||||||||||
Sbjct: 264 ggtgggaacgtggctggcgttgtcaccgacgcattcttcaacagcatcaagaaccaggcc 323
Query: 349 gggagcgggtgcgagggcaagaacttctacacccggagcgcgttcctgagcgccgtcaag 408
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 324 gggaacgggtgcgagggcaagaacttctacacccggagcgcgttcctgagcgccgccgac 383
Query: 409 gcgtacccaggcttcgcccacggcgggtcgcaggtgcagggcaagcgcgagatcgccgcc 468
|||||| |||||||| ||| ||||| |||||||||||||||||||||||||||
Sbjct: 384 gcgtacaaaggcttcggt---ggcaggtcg---gtgcagggcaagcgcgagatcgccgcc 437
Query: 469 ttcttcgcgcacgccacgcacgagaccgggcatttctgctacatcagcgagatcaacaag 528
|||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 438 ttcttcgcccacatcacgcacgagaccggacatttctgctacatcagcgagatcaacaag 497
Query: 529 agcaacgcctactgcgacccgagcaagaggcagtggccgtgcgccgcggggcagaagtac 588
| |||||||||||||||| ||||||| |||||||||||||| |||||||| |||||||||
Sbjct: 498 aacaacgcctactgcgactcgagcaacaggcagtggccgtgtgccgcgggtcagaagtac 557
Query: 589 tacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcggggagggcc 648
|||||||||||||||||||| |||||||||||||||||||||||||| || ||||||| |
Sbjct: 558 tacgggcgcggcccgctgcaaatctcgtggaactacaactacgggcctgccgggagggac 617
Query: 649 atcggcttcgacgggct 665
|||||||||||||||||
Sbjct: 618 atcggcttcgacgggct 634
Score = 167 bits (84), Expect = 3e-039
Identities = 105/112 (93%)
Strand = Plus / Plus
Query: 147 gccgccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgc 206
||||||||||||||||||||||||||| || |||||||||||||||||| ||||||
Sbjct: 132 gccgccgcgcagaactgcggctgccaggcaggttactgctgcagcaagttcggttactgc 191
Query: 207 ggcacgaccgacgagtactgcggcgacgggtgccagtcgggcccgtgccgct 258
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 ggcacgaccgacgagtactgcggcgacgggtgccagtcgggcccgtgccgct 243
Score = 42.1 bits (21), Expect = 0.12
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 109 ctctcgggctatcactcctctgcgctgtcgccg 141
||||||| ||| ||||||||||||||| |||||
Sbjct: 106 ctctcggcctagcactcctctgcgctgccgccg 138
>gb|CD229358.1|CD229358 CCC1_14_E11.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_14_E11_A007 5', mRNA sequence
Length = 648
Score = 462 bits (233), Expect = e-128
Identities = 342/377 (90%), Gaps = 6/377 (1%)
Strand = Plus / Plus
Query: 289 ggtgcgaacgtggctagcgtcgtcaccggctccttcttcaacggcatcaagaaccaggcc 348
|||| |||||||||| |||| ||||||| | | ||||||||| |||||||||||||||||
Sbjct: 264 ggtgggaacgtggctggcgttgtcaccgacgcattcttcaacagcatcaagaaccaggcc 323
Query: 349 gggagcgggtgcgagggcaagaacttctacacccggagcgcgttcctgagcgccgtcaag 408
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 324 gggaacgggtgcgagggcaagaacttctacacccggagcgcgttcctgagcgccgccgac 383
Query: 409 gcgtacccaggcttcgcccacggcgggtcgcaggtgcagggcaagcgcgagatcgccgcc 468
|||||| |||||||| ||| ||||| |||||||||||||||||||||||||||
Sbjct: 384 gcgtacaaaggcttcggt---ggcaggtcg---gtgcagggcaagcgcgagatcgccgcc 437
Query: 469 ttcttcgcgcacgccacgcacgagaccgggcatttctgctacatcagcgagatcaacaag 528
|||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 438 ttcttcgcccacatcacgcacgagaccggacatttctgctacatcagcgagatcaacaag 497
Query: 529 agcaacgcctactgcgacccgagcaagaggcagtggccgtgcgccgcggggcagaagtac 588
| |||||||||||||||| ||||||| |||||||||||||| |||||||| |||||||||
Sbjct: 498 aacaacgcctactgcgactcgagcaacaggcagtggccgtgtgccgcgggtcagaagtac 557
Query: 589 tacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcggggagggcc 648
|||||||||||||||||||| |||||||||||||||||||||||||| || ||||||| |
Sbjct: 558 tacgggcgcggcccgctgcaaatctcgtggaactacaactacgggcctgccgggagggac 617
Query: 649 atcggcttcgacgggct 665
|||||||||||||||||
Sbjct: 618 atcggcttcgacgggct 634
Score = 167 bits (84), Expect = 3e-039
Identities = 105/112 (93%)
Strand = Plus / Plus
Query: 147 gccgccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgc 206
||||||||||||||||||||||||||| || |||||||||||||||||| ||||||
Sbjct: 132 gccgccgcgcagaactgcggctgccaggcaggttactgctgcagcaagttcggttactgc 191
Query: 207 ggcacgaccgacgagtactgcggcgacgggtgccagtcgggcccgtgccgct 258
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 ggcacgaccgacgagtactgcggcgacgggtgccagtcgggcccgtgccgct 243
Score = 42.1 bits (21), Expect = 0.12
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 109 ctctcgggctatcactcctctgcgctgtcgccg 141
||||||| ||| ||||||||||||||| |||||
Sbjct: 106 ctctcggcctagcactcctctgcgctgccgccg 138
>gb|CD432211.1|CD432211 ETH1_26_H07.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_26_H07_A002 5', mRNA sequence
Length = 643
Score = 462 bits (233), Expect = e-128
Identities = 342/377 (90%), Gaps = 6/377 (1%)
Strand = Plus / Plus
Query: 289 ggtgcgaacgtggctagcgtcgtcaccggctccttcttcaacggcatcaagaaccaggcc 348
|||| |||||||||| |||| ||||||| | | ||||||||| |||||||||||||||||
Sbjct: 269 ggtgggaacgtggctggcgttgtcaccgacgcattcttcaacagcatcaagaaccaggcc 328
Query: 349 gggagcgggtgcgagggcaagaacttctacacccggagcgcgttcctgagcgccgtcaag 408
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 329 gggaacgggtgcgagggcaagaacttctacacccggagcgcgttcctgagcgccgccgac 388
Query: 409 gcgtacccaggcttcgcccacggcgggtcgcaggtgcagggcaagcgcgagatcgccgcc 468
|||||| |||||||| ||| ||||| |||||||||||||||||||||||||||
Sbjct: 389 gcgtacaaaggcttcggt---ggcaggtcg---gtgcagggcaagcgcgagatcgccgcc 442
Query: 469 ttcttcgcgcacgccacgcacgagaccgggcatttctgctacatcagcgagatcaacaag 528
|||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 443 ttcttcgcccacatcacgcacgagaccggacatttctgctacatcagcgagatcaacaag 502
Query: 529 agcaacgcctactgcgacccgagcaagaggcagtggccgtgcgccgcggggcagaagtac 588
| |||||||||||||||| ||||||| |||||||||||||| |||||||| |||||||||
Sbjct: 503 aacaacgcctactgcgactcgagcaacaggcagtggccgtgtgccgcgggtcagaagtac 562
Query: 589 tacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcggggagggcc 648
|||||||||||||||||||| |||||||||||||||||||||||||| || ||||||| |
Sbjct: 563 tacgggcgcggcccgctgcaaatctcgtggaactacaactacgggcctgccgggagggac 622
Query: 649 atcggcttcgacgggct 665
|||||||||||||||||
Sbjct: 623 atcggcttcgacgggct 639
Score = 167 bits (84), Expect = 3e-039
Identities = 105/112 (93%)
Strand = Plus / Plus
Query: 147 gccgccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgc 206
||||||||||||||||||||||||||| || |||||||||||||||||| ||||||
Sbjct: 137 gccgccgcgcagaactgcggctgccaggcaggttactgctgcagcaagttcggttactgc 196
Query: 207 ggcacgaccgacgagtactgcggcgacgggtgccagtcgggcccgtgccgct 258
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 ggcacgaccgacgagtactgcggcgacgggtgccagtcgggcccgtgccgct 248
Score = 42.1 bits (21), Expect = 0.12
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 109 ctctcgggctatcactcctctgcgctgtcgccg 141
||||||| ||| ||||||||||||||| |||||
Sbjct: 111 ctctcggcctagcactcctctgcgctgccgccg 143
>gb|CD228603.1|CD228603 CCC1_8_E11.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_8_E11_A007 5', mRNA sequence
Length = 641
Score = 458 bits (231), Expect = e-127
Identities = 340/375 (90%), Gaps = 6/375 (1%)
Strand = Plus / Plus
Query: 289 ggtgcgaacgtggctagcgtcgtcaccggctccttcttcaacggcatcaagaaccaggcc 348
|||| |||||||||| |||| ||||||| | | ||||||||| |||||||||||||||||
Sbjct: 273 ggtgggaacgtggctggcgttgtcaccgacgcattcttcaacagcatcaagaaccaggcc 332
Query: 349 gggagcgggtgcgagggcaagaacttctacacccggagcgcgttcctgagcgccgtcaag 408
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 333 gggaacgggtgcgagggcaagaacttctacacccggagcgcgttcctgagcgccgccgac 392
Query: 409 gcgtacccaggcttcgcccacggcgggtcgcaggtgcagggcaagcgcgagatcgccgcc 468
|||||| |||||||| ||| ||||| |||||||||||||||||||||||||||
Sbjct: 393 gcgtacaaaggcttcggt---ggcaggtcg---gtgcagggcaagcgcgagatcgccgcc 446
Query: 469 ttcttcgcgcacgccacgcacgagaccgggcatttctgctacatcagcgagatcaacaag 528
|||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 447 ttcttcgcccacatcacgcacgagaccggacatttctgctacatcagcgagatcaacaag 506
Query: 529 agcaacgcctactgcgacccgagcaagaggcagtggccgtgcgccgcggggcagaagtac 588
| |||||||||||||||| ||||||| |||||||||||||| |||||||| |||||||||
Sbjct: 507 aacaacgcctactgcgactcgagcaacaggcagtggccgtgtgccgcgggtcagaagtac 566
Query: 589 tacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcggggagggcc 648
|||||||||||||||||||| |||||||||||||||||||||||||| || ||||||| |
Sbjct: 567 tacgggcgcggcccgctgcaaatctcgtggaactacaactacgggcctgccgggagggac 626
Query: 649 atcggcttcgacggg 663
|||||||||||||||
Sbjct: 627 atcggcttcgacggg 641
Score = 167 bits (84), Expect = 3e-039
Identities = 105/112 (93%)
Strand = Plus / Plus
Query: 147 gccgccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgc 206
||||||||||||||||||||||||||| || |||||||||||||||||| ||||||
Sbjct: 141 gccgccgcgcagaactgcggctgccaggcaggttactgctgcagcaagttcggttactgc 200
Query: 207 ggcacgaccgacgagtactgcggcgacgggtgccagtcgggcccgtgccgct 258
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggcacgaccgacgagtactgcggcgacgggtgccagtcgggcccgtgccgct 252
Score = 42.1 bits (21), Expect = 0.12
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 109 ctctcgggctatcactcctctgcgctgtcgccg 141
||||||| ||| ||||||||||||||| |||||
Sbjct: 115 ctctcggcctagcactcctctgcgctgccgccg 147
>gb|CD229356.1|CD229356 CCC1_14_A10.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_14_A10_A007 5', mRNA sequence
Length = 640
Score = 454 bits (229), Expect = e-126
Identities = 341/377 (90%), Gaps = 6/377 (1%)
Strand = Plus / Plus
Query: 289 ggtgcgaacgtggctagcgtcgtcaccggctccttcttcaacggcatcaagaaccaggcc 348
|||| |||||||||| |||| ||||||| | | ||||||||| |||||||||||||||||
Sbjct: 253 ggtgggaacgtggctggcgttgtcaccgacgcattcttcaacagcatcaagaaccaggcc 312
Query: 349 gggagcgggtgcgagggcaagaacttctacacccggagcgcgttcctgagcgccgtcaag 408
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 313 gggaacgggtgcgagggcaagaacttctacacccggagcgcgttcctgagcgccgccgac 372
Query: 409 gcgtacccaggcttcgcccacggcgggtcgcaggtgcagggcaagcgcgagatcgccgcc 468
|||||| |||||||| ||| ||||| |||||||||||||||||||||||||||
Sbjct: 373 gcgtacaaaggcttcggt---ggcaggtcg---gtgcagggcaagcgcgagatcgccgcc 426
Query: 469 ttcttcgcgcacgccacgcacgagaccgggcatttctgctacatcagcgagatcaacaag 528
|||||||| ||| ||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 427 ttcttcgcccacatcacgcacgagaccggacattcctgctacatcagcgagatcaacaag 486
Query: 529 agcaacgcctactgcgacccgagcaagaggcagtggccgtgcgccgcggggcagaagtac 588
| |||||||||||||||| ||||||| |||||||||||||| |||||||| |||||||||
Sbjct: 487 aacaacgcctactgcgactcgagcaacaggcagtggccgtgtgccgcgggtcagaagtac 546
Query: 589 tacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcggggagggcc 648
|||||||||||||||||||| |||||||||||||||||||||||||| || ||||||| |
Sbjct: 547 tacgggcgcggcccgctgcaaatctcgtggaactacaactacgggcctgccgggagggac 606
Query: 649 atcggcttcgacgggct 665
|||||||||||||||||
Sbjct: 607 atcggcttcgacgggct 623
Score = 167 bits (84), Expect = 3e-039
Identities = 105/112 (93%)
Strand = Plus / Plus
Query: 147 gccgccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgc 206
||||||||||||||||||||||||||| || |||||||||||||||||| ||||||
Sbjct: 121 gccgccgcgcagaactgcggctgccaggcaggttactgctgcagcaagttcggttactgc 180
Query: 207 ggcacgaccgacgagtactgcggcgacgggtgccagtcgggcccgtgccgct 258
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcacgaccgacgagtactgcggcgacgggtgccagtcgggcccgtgccgct 232
Score = 42.1 bits (21), Expect = 0.12
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 109 ctctcgggctatcactcctctgcgctgtcgccg 141
||||||| ||| ||||||||||||||| |||||
Sbjct: 95 ctctcggcctagcactcctctgcgctgccgccg 127
>gb|CD464127.1|CD464127 ETH1_48_G10.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_48_G10_A002 5', mRNA sequence
Length = 719
Score = 450 bits (227), Expect = e-124
Identities = 390/443 (88%), Gaps = 6/443 (1%)
Strand = Plus / Plus
Query: 288 tggtgcgaacgtggctagcgtcgtcaccggctccttcttcaacggcatcaagaaccaggc 347
||||| |||||||| |||||| ||||||| | | ||||||||||||||||||||||||||
Sbjct: 281 tggtgggaacgtgggtagcgttgtcaccgacgcattcttcaacggcatcaagaaccaggc 340
Query: 348 cgggagcgggtgcgagggcaagaacttctacacccggagcgcgttcctgagcgccgtcaa 407
| ||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||
Sbjct: 341 tgcgagcgggtgcgagggcaagaacttctacaccaggagtgcgttcctgagcgccgccaa 400
Query: 408 ggcgtacccaggcttcgcccacggcgggtcgcaggtgcagggcaagcgcgagatcgccgc 467
||||| | |||||| ||||||||| ||| |||||||||||||||||||||
Sbjct: 401 ctcgtacaaaagcttcggt---ggcgggtcg---gtggcgggcaagcgcgagatcgccgc 454
Query: 468 cttcttcgcgcacgccacgcacgagaccgggcatttctgctacatcagcgagatcaacaa 527
|||||||| || | ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tttcttcgcccatgtcacccacgagaccgggcatttctgctacatcagcgagatcaacaa 514
Query: 528 gagcaacgcctactgcgacccgagcaagaggcagtggccgtgcgccgcggggcagaagta 587
|| |||||||||||||||| ||||||| | ||||||||||||||||||||| ||||||||
Sbjct: 515 gaacaacgcctactgcgactcgagcaacaagcagtggccgtgcgccgcgggacagaagta 574
Query: 588 ctacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcggggagggc 647
||||||||||||||| ||||| |||||||||||||||||||||||||| || |||| |||
Sbjct: 575 ctacgggcgcggcccactgcaaatctcgtggaactacaactacgggcctgccgggaaggc 634
Query: 648 catcggcttcgacgggctcggggaccccggcagggtggcgcgggacgccgtggtggcgtt 707
|||||||||| ||||||||| | |||| || |||||||| |||||||||| | |||||
Sbjct: 635 catcggcttcaacgggctcgcgaacccgaacaaggtggcgcaggacgccgtgatcgcgtt 694
Query: 708 caaggcggcgctctggttctgga 730
|||| |||||||||||| |||||
Sbjct: 695 caagacggcgctctggtactgga 717
Score = 190 bits (96), Expect = 2e-046
Identities = 135/148 (91%)
Strand = Plus / Plus
Query: 111 ctcgggctatcactcctctgcgctgtcgccggcccggccgccgcgcagaactgcggctgc 170
||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 111 ctcgggctagcactcctctgcgctgccgccgtcccggccgccgcgcagaactgcggctgc 170
Query: 171 cagccaaacgtctgctgcagcaagttcggctactgcggcacgaccgacgagtactgcggc 230
||| || |||||||||||||||||| |||||||||||||| ||||| ||||| |||
Sbjct: 171 caggcaggttactgctgcagcaagttcggttactgcggcacgacggacgactactgtggc 230
Query: 231 gacgggtgccagtcgggcccgtgccgct 258
||||||||||||||||||||||||||||
Sbjct: 231 gacgggtgccagtcgggcccgtgccgct 258
>gb|CD220668.1|CD220668 CCC1_68_B04.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_68_B04_A007 5', mRNA sequence
Length = 638
Score = 448 bits (226), Expect = e-124
Identities = 340/377 (90%), Gaps = 6/377 (1%)
Strand = Plus / Plus
Query: 289 ggtgcgaacgtggctagcgtcgtcaccggctccttcttcaacggcatcaagaaccaggcc 348
|||| |||||||||| |||| ||||||| | | ||||||||| |||||||||||||||||
Sbjct: 264 ggtgggaacgtggctggcgttgtcaccgacgcattcttcaacagcatcaagaaccaggcc 323
Query: 349 gggagcgggtgcgagggcaagaacttctacacccggagcgcgttcctgagcgccgtcaag 408
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 324 gggaacgggtgcgagggcaagaacttctacacccggagcgcgttcctgagcgccgccgac 383
Query: 409 gcgtacccaggcttcgcccacggcgggtcgcaggtgcagggcaagcgcgagatcgccgcc 468
|||||| |||||||| ||| ||||| |||||||||||||||||||||||||||
Sbjct: 384 gcgtacaaaggcttcggt---ggcaggtcg---gtgcagggcaagcgcgagatcgccgcc 437
Query: 469 ttcttcgcgcacgccacgcacgagaccgggcatttctgctacatcagcgagatcaacaag 528
|||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 438 ttcttcgcccacatcacgcacgagaccggacatttctgctacatcagcgagatcaacaag 497
Query: 529 agcaacgcctactgcgacccgagcaagaggcagtggccgtgcgccgcggggcagaagtac 588
| |||||||||||||||| ||||||| |||||||||||||| |||||||| |||||||||
Sbjct: 498 aacaacgcctactgcgactcgagcaacaggcagtggccgtgtgccgcgggtcagaagtac 557
Query: 589 tacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcggggagggcc 648
|||||||||||||||||||| ||| ||||||||||||||||| |||| || ||||||| |
Sbjct: 558 tacgggcgcggcccgctgcaaatcgcgtggaactacaactacnggcctgccgggagggac 617
Query: 649 atcggcttcgacgggct 665
|||||||||||||||||
Sbjct: 618 atcggcttcgacgggct 634
Score = 167 bits (84), Expect = 3e-039
Identities = 105/112 (93%)
Strand = Plus / Plus
Query: 147 gccgccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgc 206
||||||||||||||||||||||||||| || |||||||||||||||||| ||||||
Sbjct: 132 gccgccgcgcagaactgcggctgccaggcaggttactgctgcagcaagttcggttactgc 191
Query: 207 ggcacgaccgacgagtactgcggcgacgggtgccagtcgggcccgtgccgct 258
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 ggcacgaccgacgagtactgcggcgacgggtgccagtcgggcccgtgccgct 243
Score = 42.1 bits (21), Expect = 0.12
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 109 ctctcgggctatcactcctctgcgctgtcgccg 141
||||||| ||| ||||||||||||||| |||||
Sbjct: 106 ctctcggcctagcactcctctgcgctgccgccg 138
>gb|AW746695.1|AW746695 WS1_54_E02.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 575
Score = 440 bits (222), Expect = e-121
Identities = 333/370 (90%)
Strand = Plus / Plus
Query: 536 cctactgcgacccgagcaagaggcagtggccgtgcgccgcggggcagaagtactacgggc 595
||||||||||| ||||||| | ||||||||||||||||||||| ||||||||||||||||
Sbjct: 1 cctactgcgactcgagcaacaagcagtggccgtgcgccgcgggacagaagtactacgggc 60
Query: 596 gcggcccgctgcagatctcgtggaactacaactacgggcccgcggggagggccatcggct 655
||||||||||||| |||||||||||||||||||||||||| || |||| |||||||||||
Sbjct: 61 gcggcccgctgcaaatctcgtggaactacaactacgggcctgccgggaaggccatcggct 120
Query: 656 tcgacgggctcggggaccccggcagggtggcgcgggacgccgtggtggcgttcaaggcgg 715
|| ||||||||| | |||| || |||||||| |||||||||| | ||||||||| |||
Sbjct: 121 tcaacgggctcgcgaacccgaacaaggtggcgcaggacgccgtgatcgcgttcaagacgg 180
Query: 716 cgctctggttctggatgaacagcgtgcacggggtggtgccgcaggggttcggcgccacca 775
||||||||| ||||| ||||| ||||||||||||| || |||||||||||||||||||||
Sbjct: 181 cgctctggtactggacgaacaacgtgcacggggtgatgtcgcaggggttcggcgccacca 240
Query: 776 ccagggccatcaacggcgccctcgagtgcggcgggaacaaccccgcccagatgaacgcgc 835
|||||||||||||||||||||||||||| ||| || || | ||||||||||||||||
Sbjct: 241 tcagggccatcaacggcgccctcgagtgcaacggcaagaatactgcccagatgaacgcgc 300
Query: 836 gcgtcggctactacaggcagtactgccgccagctcggcgtcgaccccgggcccaacctca 895
| || |||||||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 301 gggtgggctactacaagcagtactgccggcagctcggcgtcgaccccgggcccaacctca 360
Query: 896 cctgctaggc 905
| ||||||||
Sbjct: 361 cttgctaggc 370
>gb|CD432114.1|CD432114 ETH1_26_H07.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_26_H07_A002 3', mRNA sequence
Length = 566
Score = 440 bits (222), Expect = e-121
Identities = 331/366 (90%), Gaps = 1/366 (0%)
Strand = Plus / Plus
Query: 550 agcaagaggcagtggccgtgcgccgcggggcagaagtactacgggcgcggcccgctgcag 609
||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 1 agcaacaggcagtggccgtgtgccgcgggtcagaagtactacgggcgcggcccgctgcaa 60
Query: 610 atctcgtggaactacaactacgggcccgcggggagggccatcggcttcgacgggctcggg 669
|||||||||||||||||||||||||| || ||||||| |||||||||||||||||| ||
Sbjct: 61 atctcgtggaactacaactacgggcctgccgggagggacatcggcttcgacgggcttcgg 120
Query: 670 gaccccggcagggtggcgcgggacgccgtggtggcgttcaaggcggcgctctggttctgg 729
|||| | ||||||||||| |||||||||||| ||||||||| |||||||||||||||||
Sbjct: 121 aacccggacagggtggcgcaggacgccgtggtcgcgttcaagacggcgctctggttctgg 180
Query: 730 atgaacagcgtgcacggggtggtgccgcaggggttcggcgccaccaccagggccatcaac 789
| |||| ||||||||||||| || ||||||||||||||||||||| |||||||||||||
Sbjct: 181 accaacaacgtgcacggggtgatgtcgcaggggttcggcgccaccatcagggccatcaac 240
Query: 790 ggcgccctcgagtgcggcgggaacaaccccgcccagatgaacgcgcgcgtcggctactac 849
||||||||||||||| ||| || || | ||||||||||||||||| || |||||||||
Sbjct: 241 ggcgccctcgagtgcaacggcaagaatactgcccagatgaacgcgcgggtgggctactac 300
Query: 850 aggcagtactgccgccagctcggcgtcgaccccgggcccaacctcacctgctaggctagc 909
||||||||||||| |||||||||||||||||||| ||||||||||| ||||||| ||||
Sbjct: 301 aggcagtactgccagcagctcggcgtcgaccccggacccaacctcacttgctagg-tagc 359
Query: 910 taggcg 915
||||||
Sbjct: 360 taggcg 365
>gb|AW745790.1|AW745790 WS1_37_H11.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 388
Score = 436 bits (220), Expect = e-120
Identities = 347/388 (89%), Gaps = 6/388 (1%)
Strand = Plus / Plus
Query: 300 ggctagcgtcgtcaccggctccttcttcaacggcatcaagaaccaggccgggagcgggtg 359
|||| |||| ||||||| | | ||||||||| ||||||||||||||||||||| ||||||
Sbjct: 7 ggctggcgttgtcaccgacgcattcttcaacagcatcaagaaccaggccgggaacgggtg 66
Query: 360 cgagggcaagaacttctacacccggagcgcgttcctgagcgccgtcaaggcgtacccagg 419
|||||||||||||||||||||||||||||||||||||||||||| | | |||||| |||
Sbjct: 67 cgagggcaagaacttctacacccggagcgcgttcctgagcgccgccgacgcgtacaaagg 126
Query: 420 cttcgcccacggcgggtcgcaggtgcagggcaagcgcgagatcgccgccttcttcgcgca 479
||||| ||| ||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 127 cttcggt---ggcaggtcg---gtgcagggcaagcgcgagatcgccgccttcttcgccca 180
Query: 480 cgccacgcacgagaccgggcatttctgctacatcagcgagatcaacaagagcaacgccta 539
| ||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 181 catcacgcacgataccggacatttctgctacatcagcgagatcaacaagaacaacgccta 240
Query: 540 ctgcgacccgagcaagaggcagtggccgtgcgccgcggggcagaagtactacgggcgcgg 599
||||||| ||||||| |||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 241 ctgcgactcgagcaacaggcagtggccgtgtgccgcgggtcagaagtactacgggcgcgg 300
Query: 600 cccgctgcagatctcgtggaactacaactacgggcccgcggggagggccatcggcttcga 659
|||||||| |||||||||||||||||||||||||| || ||||||| ||||||||||||
Sbjct: 301 gccgctgcaaatctcgtggaactacaactacgggcctgccgggagggacatcggcttcga 360
Query: 660 cgggctcggggaccccggcagggtggcg 687
|||||| || |||| | ||||||||||
Sbjct: 361 cgggcttcggaacccggacagggtggcg 388
>gb|CN151443.1|CN151443 WOUND1_75_B02.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_75_B02_A002 5', mRNA sequence
Length = 801
Score = 436 bits (220), Expect = e-120
Identities = 447/520 (85%), Gaps = 7/520 (1%)
Strand = Plus / Plus
Query: 292 gcgaacgtggctagcgtcgtcaccggctccttcttcaacggcatcaagaaccaggccggg 351
|||||||| | || ||||||||||| | | |||||||||||||||||||||||||||||
Sbjct: 279 gcgaacgtcggtaacgtcgtcaccgacgcgttcttcaacggcatcaagaaccaggccgga 338
Query: 352 agcgggtgcgagggcaagaacttctacacccggagcgcgttcctgagcgccgtca----- 406
|| ||||||||||||| ||||||||| | || ||||||||||||||| | ||
Sbjct: 339 agtgggtgcgagggcagcaacttctactcgcgcgacgcgttcctgagcgctgccagtgcc 398
Query: 407 ag-gcgtacccaggcttcgcccacggcgggtcgcaggtgcagggcaagcgcgagatcgcc 465
|| |||||| | ||||||||||| ||||| ||| ||| | ||||||||||||||||||
Sbjct: 399 agtgcgtactccggcttcgcccagggcggctcggaggacgacggcaagcgcgagatcgcc 458
Query: 466 gcc-ttcttcgcgcacgccacgcacgagaccgggcatttctgctacatcagcgagatcaa 524
||| |||||||| |||||||| ||||||||||| |||||||||||||| |||||||||||
Sbjct: 459 gccgttcttcgctcacgccacacacgagaccggacatttctgctacattagcgagatcaa 518
Query: 525 caagagcaacgcctactgcgacccgagcaagaggcagtggccgtgcgccgcggggcagaa 584
|||| |||||||||||| ||| ||||| | | ||||||||||||||||||||||||||
Sbjct: 519 caaggacaacgcctactgtgactcgagctacacacagtggccgtgcgccgcggggcagaa 578
Query: 585 gtactacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcggggag 644
||||||||| | ||||| |||||||||||||||||||||||||||||||| || ||
Sbjct: 579 gtactacggaagaggccccctgcagatctcgtggaactacaactacgggccggcaggaca 638
Query: 645 ggccatcggcttcgacgggctcggggaccccggcagggtggcgcgggacgccgtggtggc 704
| |||| ||||||||||||||||| |||| | | ||||||| |||||||||| | ||
Sbjct: 639 gagcatcagcttcgacgggctcgggaacccggacgccgtggcgcaggacgccgtgatcgc 698
Query: 705 gttcaaggcggcgctctggttctggatgaacagcgtgcacggggtggtgccgcaggggtt 764
|||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||
Sbjct: 699 gttcaaggcggcgctctggttctggatgaacaacgtgcacggggtgatgccacaggggtt 758
Query: 765 cggcgccaccaccagggccatcaacggcgccctcgagtgc 804
|||||||||| ||| ||||| ||||||||||||||||||
Sbjct: 759 tggcgccaccatcagagccataaacggcgccctcgagtgc 798
Score = 115 bits (58), Expect = 1e-023
Identities = 111/128 (86%), Gaps = 3/128 (2%)
Strand = Plus / Plus
Query: 123 ctcctctgcgctgtcgccggcccggccgccgcgcagaactgcggctgccagccaaacgtc 182
|||||||||||||||| | ||||||||||||||||||||||||||||||||| || ||
Sbjct: 108 ctcctctgcgctgtcg---gtccggccgccgcgcagaactgcggctgccagccagacttc 164
Query: 183 tgctgcagcaagttcggctactgcggcacgaccgacgagtactgcggcgacgggtgccag 242
||||||||| ||| |||||||||||| |||| ||||||||| ||| |||||||| |
Sbjct: 165 tgctgcagccagtatggctactgcggccagaccagcgagtactgtggcaccgggtgccgg 224
Query: 243 tcgggccc 250
||||||||
Sbjct: 225 tcgggccc 232
>gb|CD222883.1|CD222883 CCC1_24_C04.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_24_C04_A007 5', mRNA sequence
Length = 667
Score = 428 bits (216), Expect = e-118
Identities = 340/380 (89%), Gaps = 6/380 (1%)
Strand = Plus / Plus
Query: 288 tggtgcgaacgtggctagcgtcgtcaccggctccttcttcaacggcatcaagaaccaggc 347
||||| |||||||| |||||| ||||||| | | ||||||||||||||||||||||||||
Sbjct: 286 tggtgggaacgtgggtagcgttgtcaccgacgcattcttcaacggcatcaagaaccaggc 345
Query: 348 cgggagcgggtgcgagggcaagaacttctacacccggagcgcgttcctgagcgccgtcaa 407
|| ||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||
Sbjct: 346 cgcgagcgggtgcgagggcaagaacttctacaccaggagtgcgttcctgagcgccgccaa 405
Query: 408 ggcgtacccaggcttcgcccacggcgggtcgcaggtgcagggcaagcgcgagatcgccgc 467
||||| | |||||| ||||||||| ||| |||||||||||||||||||||
Sbjct: 406 ctcgtacaaaagcttcggt---ggcgggtcg---gtggcgggcaagcgcgagatcgccgc 459
Query: 468 cttcttcgcgcacgccacgcacgagaccgggcatttctgctacatcagcgagatcaacaa 527
|||||||| || | ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tttcttcgcccatgtcacccacgagaccgggcatttctgctacatcagcgagatcaacaa 519
Query: 528 gagcaacgcctactgcgacccgagcaagaggcagtggccgtgcgccgcggggcagaagta 587
|| |||||||||||||||| ||||||| | ||||||||||||||||||||| ||||||||
Sbjct: 520 gaacaacgcctactgcgactcgagcaacaagcagtggccgtgcgccgcgggacagaagta 579
Query: 588 ctacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcggggagggc 647
||||||||||||||||||||| |||||||||||||||||||||||||| || |||| |||
Sbjct: 580 ctacgggcgcggcccgctgcaaatctcgtggaactacaactacgggcctgccgggaaggc 639
Query: 648 catcggcttcgacgggctcg 667
|||||||||| |||||||||
Sbjct: 640 catcggcttcaacgggctcg 659
Score = 194 bits (98), Expect = 1e-047
Identities = 137/150 (91%)
Strand = Plus / Plus
Query: 109 ctctcgggctatcactcctctgcgctgtcgccggcccggccgccgcgcagaactgcggct 168
||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 114 ctctcgggctagcactcctctgcgctgccgccgtcccggccgccgcgcagaactgcggct 173
Query: 169 gccagccaaacgtctgctgcagcaagttcggctactgcggcacgaccgacgagtactgcg 228
||||| || |||||||||||||||||| |||||||||||||| ||||| ||||| |
Sbjct: 174 gccaggcaggttactgctgcagcaagttcggttactgcggcacgacggacgactactgtg 233
Query: 229 gcgacgggtgccagtcgggcccgtgccgct 258
||||||||||||||||||||||||||||||
Sbjct: 234 gcgacgggtgccagtcgggcccgtgccgct 263
>gb|CD223234.1|CD223234 CCC1_26_D09.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_26_D09_A007 5', mRNA sequence
Length = 662
Score = 428 bits (216), Expect = e-118
Identities = 340/380 (89%), Gaps = 6/380 (1%)
Strand = Plus / Plus
Query: 288 tggtgcgaacgtggctagcgtcgtcaccggctccttcttcaacggcatcaagaaccaggc 347
||||| |||||||| |||||| ||||||| | | ||||||||||||||||||||||||||
Sbjct: 285 tggtgggaacgtgggtagcgttgtcaccgacgcattcttcaacggcatcaagaaccaggc 344
Query: 348 cgggagcgggtgcgagggcaagaacttctacacccggagcgcgttcctgagcgccgtcaa 407
|| ||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||
Sbjct: 345 cgcgagcgggtgcgagggcaagaacttctacaccaggagtgcgttcctgagcgccgccaa 404
Query: 408 ggcgtacccaggcttcgcccacggcgggtcgcaggtgcagggcaagcgcgagatcgccgc 467
||||| | |||||| ||||||||| ||| |||||||||||||||||||||
Sbjct: 405 ctcgtacaaaagcttcggt---ggcgggtcg---gtggcgggcaagcgcgagatcgccgc 458
Query: 468 cttcttcgcgcacgccacgcacgagaccgggcatttctgctacatcagcgagatcaacaa 527
|||||||| || | ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 tttcttcgcccatgtcacccacgagaccgggcatttctgctacatcagcgagatcaacaa 518
Query: 528 gagcaacgcctactgcgacccgagcaagaggcagtggccgtgcgccgcggggcagaagta 587
|| |||||||||||||||| ||||||| | ||||||||||||||||||||| ||||||||
Sbjct: 519 gaacaacgcctactgcgactcgagcaacaagcagtggccgtgcgccgcgggacagaagta 578
Query: 588 ctacgggcgcggcccgctgcagatctcgtggaactacaactacgggcccgcggggagggc 647
||||||||||||||||||||| |||||||||||||||||||||||||| || |||| |||
Sbjct: 579 ctacgggcgcggcccgctgcaaatctcgtggaactacaactacgggcctgccgggaaggc 638
Query: 648 catcggcttcgacgggctcg 667
|||||||||| |||||||||
Sbjct: 639 catcggcttcaacgggctcg 658
Score = 194 bits (98), Expect = 1e-047
Identities = 137/150 (91%)
Strand = Plus / Plus
Query: 109 ctctcgggctatcactcctctgcgctgtcgccggcccggccgccgcgcagaactgcggct 168
||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 113 ctctcgggctagcactcctctgcgctgccgccgtcccggccgccgcgcagaactgcggct 172
Query: 169 gccagccaaacgtctgctgcagcaagttcggctactgcggcacgaccgacgagtactgcg 228
||||| || |||||||||||||||||| |||||||||||||| ||||| ||||| |
Sbjct: 173 gccaggcaggttactgctgcagcaagttcggttactgcggcacgacggacgactactgag 232
Query: 229 gcgacgggtgccagtcgggcccgtgccgct 258
||||||||||||||||||||||||||||||
Sbjct: 233 gcgacgggtgccagtcgggcccgtgccgct 262
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 334,042
Number of Sequences: 832831
Number of extensions: 334042
Number of successful extensions: 97324
Number of sequences better than 0.5: 300
Number of HSP's better than 0.5 without gapping: 299
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 95910
Number of HSP's gapped (non-prelim): 1204
length of query: 1186
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1166
effective length of database: 474,703,049
effective search space: 553503755134
effective search space used: 553503755134
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)