BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161238.2.1
(1225 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE363714.1|BE363714 WS1_69_C06.g2_A002 Water-stressed 1 ... 644 0.0
gb|CD221995.1|CD221995 CCC1_1_C09.b1_A007 Callus culture/ce... 644 0.0
gb|CD222353.1|CD222353 CCC1_21_F09.b1_A007 Callus culture/c... 644 0.0
gb|CD226631.1|CD226631 CCC1_47_H05.b1_A007 Callus culture/c... 644 0.0
gb|AW680953.1|AW680953 WS1_9_A06.b1_A002 Water-stressed 1 (... 640 0.0
gb|CD225895.1|CD225895 CCC1_42_B03.b1_A007 Callus culture/c... 636 e-180
gb|BE918012.1|BE918012 OV1_8_G11.g1_A002 Ovary 1 (OV1) Sorg... 634 e-180
gb|AY047607.1| Sorghum bicolor chitinase-B mRNA, partial cds 632 e-179
gb|AY047608.1| Sorghum bicolor chitinase-B1 mRNA, complete cds 632 e-179
gb|BE363379.1|BE363379 WS1_62_C05.g1_A002 Water-stressed 1 ... 626 e-177
gb|CD223183.1|CD223183 CCC1_26_G01.g1_A007 Callus culture/c... 626 e-177
gb|CN132942.1|CN132942 OX1_9_D11.b1_A002 Oxidatively-stress... 626 e-177
gb|BE918591.1|BE918591 OV1_8_G11.b1_A002 Ovary 1 (OV1) Sorg... 599 e-169
gb|CD464022.1|CD464022 ETH1_48_G10.b1_A002 Ethylene-treated... 589 e-166
gb|CN133023.1|CN133023 OX1_9_D11.g1_A002 Oxidatively-stress... 585 e-165
gb|BG101749.1|BG101749 EM1_5_G10.b1_A002 Embryo 1 (EM1) Sor... 583 e-164
gb|CD220272.1|CD220272 CCC1_66_G11.b1_A007 Callus culture/c... 581 e-164
gb|AW746018.1|AW746018 WS1_38_H11.g1_A002 Water-stressed 1 ... 577 e-163
gb|CD224094.1|CD224094 CCC1_32_C12.b1_A007 Callus culture/c... 577 e-163
gb|CD226332.1|CD226332 CCC1_45_F08.b1_A007 Callus culture/c... 577 e-163
gb|AW922735.1|AW922735 DG1_45_B06.g1_A002 Dark Grown 1 (DG1... 555 e-156
gb|CL160722.1|CL160722 104_351_10805186_116_31825_242 Sorgh... 541 e-152
gb|CW365833.1|CW365833 fsbb001f038i18k0 Sorghum methylation... 541 e-152
gb|AF402939.1|AF402939 Sorghum halepense chitinase-B gene, ... 539 e-151
gb|AW924422.1|AW924422 WS1_69_C06.b1_A002 Water-stressed 1 ... 533 e-149
gb|AF402938.1|AF402938 Sorghum arundinaceum chitinase-B gen... 531 e-149
gb|CD226807.1|CD226807 CCC1_48_C11.b1_A007 Callus culture/c... 519 e-145
gb|AY048375.1| Sorghum bicolor chitinase-B gene, partial cds 515 e-144
gb|CW302450.1|CW302450 104_786_11464725_116_35662_085 Sorgh... 513 e-143
gb|AW746695.1|AW746695 WS1_54_E02.g1_A002 Water-stressed 1 ... 511 e-143
gb|AW922776.1|AW922776 DG1_46_C01.g1_A002 Dark Grown 1 (DG1... 511 e-143
gb|CD228493.1|CD228493 CCC1_8_E11.b1_A007 Callus culture/ce... 505 e-141
gb|AW745819.1|AW745819 WS1_37_H11.g1_A002 Water-stressed 1 ... 504 e-140
gb|CX610007.1|CX610007 ANR1_16_C10.b1_A002 Anaerobic roots ... 504 e-140
gb|CX613448.1|CX613448 GABR1_8_E12.b1_A002 GA- or brassinol... 504 e-140
gb|CN151360.1|CN151360 WOUND1_75_B02.b1_A002 Wounded leaves... 498 e-139
gb|BG556500.1|BG556500 EM1_37_H12.g1_A002 Embryo 1 (EM1) So... 494 e-137
gb|CD223269.1|CD223269 CCC1_27_E04.b1_A007 Callus culture/c... 492 e-137
gb|CD227859.1|CD227859 CCC1_56_F04.b1_A007 Callus culture/c... 492 e-137
gb|CD228687.1|CD228687 CCC1_9_D03.b1_A007 Callus culture/ce... 492 e-137
gb|CD220455.1|CD220455 CCC1_67_F06.b1_A007 Callus culture/c... 490 e-136
gb|CD225586.1|CD225586 CCC1_40_H10.b1_A007 Callus culture/c... 488 e-136
gb|CD222930.1|CD222930 CCC1_25_F06.b1_A007 Callus culture/c... 486 e-135
gb|CW098317.1|CW098317 104_464_11002941_148_34366_083 Sorgh... 484 e-134
gb|CD221392.1|CD221392 CCC1_54_C04.b1_A007 Callus culture/c... 484 e-134
gb|CD224145.1|CD224145 CCC1_32_A09.b1_A007 Callus culture/c... 484 e-134
gb|CD226496.1|CD226496 CCC1_46_E08.b1_A007 Callus culture/c... 484 e-134
gb|CD228140.1|CD228140 CCC1_6_E03.b1_A007 Callus culture/ce... 484 e-134
gb|CD229477.1|CD229477 CCC1_16_C07.b1_A007 Callus culture/c... 476 e-132
gb|CW088904.1|CW088904 104_434_10948392_114_32602_096 Sorgh... 460 e-127
gb|CW275250.1|CW275250 104_748_11404861_148_35382_055 Sorgh... 458 e-127
gb|CD432114.1|CD432114 ETH1_26_H07.b1_A002 Ethylene-treated... 458 e-127
gb|CD229267.1|CD229267 CCC1_14_D09.b1_A007 Callus culture/c... 454 e-126
gb|CW448428.1|CW448428 fsbb001f182a11k0 Sorghum methylation... 446 e-123
gb|CD226725.1|CD226725 CCC1_47_H05.g1_A007 Callus culture/c... 436 e-120
gb|CD223155.1|CD223155 CCC1_26_G01.b1_A007 Callus culture/c... 424 e-117
gb|CW150339.1|CW150339 104_549_11142974_116_36302_051 Sorgh... 420 e-115
gb|CD220568.1|CD220568 CCC1_68_B04.b1_A007 Callus culture/c... 418 e-115
gb|CD423411.1|CD423411 SA1_23_C09.b1_A002 Salicylic acid-tr... 412 e-113
gb|CW066077.1|CW066077 104_313_10523499_114_30148 Sorghum m... 410 e-112
gb|CD464127.1|CD464127 ETH1_48_G10.g1_A002 Ethylene-treated... 408 e-112
gb|CN135214.1|CN135214 OX1_31_G02.b1_A002 Oxidatively-stres... 408 e-112
gb|BG463695.1|BG463695 EM1_50_H02.g1_A002 Embryo 1 (EM1) So... 404 e-111
gb|BE357733.1|BE357733 DG1_22_D10.b1_A002 Dark Grown 1 (DG1... 402 e-110
gb|AW924229.1|AW924229 WS1_51_H04.b1_A002 Water-stressed 1 ... 400 e-109
gb|DQ190422.1| Sorghum halepense isolate hal3 chitinase-B (... 400 e-109
gb|DQ190423.1| Sorghum halepense isolate hal4 chitinase-B (... 400 e-109
gb|DQ190424.1| Sorghum halepense isolate hal6 chitinase-B (... 400 e-109
gb|CW117036.1|CW117036 104_493_11107443_148_34610_016 Sorgh... 389 e-106
gb|BG102665.1|BG102665 RHIZ2_35_G08.g1_A003 Rhizome2 (RHIZ2... 389 e-106
gb|CN151443.1|CN151443 WOUND1_75_B02.g1_A002 Wounded leaves... 387 e-105
gb|BG464391.1|BG464391 EM1_69_B11.g1_A002 Embryo 1 (EM1) So... 383 e-104
gb|CX613534.1|CX613534 GABR1_8_E12.g1_A002 GA- or brassinol... 369 e-100
gb|CW318996.1|CW318996 104_811_11474252_116_35881_074 Sorgh... 367 2e-099
gb|CW357974.1|CW357974 fsbb001f024n22k0 Sorghum methylation... 367 2e-099
gb|BE359997.1|BE359997 DG1_60_H07.g2_A002 Dark Grown 1 (DG1... 367 2e-099
gb|CD228683.1|CD228683 CCC1_9_D11.b1_A007 Callus culture/ce... 365 6e-099
gb|CW489486.1|CW489486 fsbb001f274h04f0 Sorghum methylation... 363 3e-098
gb|BE357811.1|BE357811 DG1_22_D10.g1_A002 Dark Grown 1 (DG1... 363 3e-098
gb|BG049497.1|BG049497 OV1_20_G04.g1_A002 Ovary 1 (OV1) Sor... 363 3e-098
gb|CX610094.1|CX610094 ANR1_16_C10.g1_A002 Anaerobic roots ... 361 1e-097
gb|CD222097.1|CD222097 CCC1_2_C04.b1_A007 Callus culture/ce... 359 4e-097
gb|CD222724.1|CD222724 CCC1_23_G10.g1_A007 Callus culture/c... 359 4e-097
gb|CD226424.1|CD226424 CCC1_45_F08.g1_A007 Callus culture/c... 359 4e-097
gb|CD227445.1|CD227445 CCC1_51_E06.g1_A007 Callus culture/c... 359 4e-097
gb|CD229358.1|CD229358 CCC1_14_E11.g1_A007 Callus culture/c... 359 4e-097
gb|CD432211.1|CD432211 ETH1_26_H07.g1_A002 Ethylene-treated... 359 4e-097
gb|CD220604.1|CD220604 CCC1_68_C10.b1_A007 Callus culture/c... 355 6e-096
gb|CD228603.1|CD228603 CCC1_8_E11.g1_A007 Callus culture/ce... 355 6e-096
gb|CD229356.1|CD229356 CCC1_14_A10.g1_A007 Callus culture/c... 351 1e-094
gb|CD220668.1|CD220668 CCC1_68_B04.g1_A007 Callus culture/c... 345 6e-093
gb|AW745790.1|AW745790 WS1_37_H11.b1_A002 Water-stressed 1 ... 343 2e-092
gb|CX616381.1|CX616381 GABR1_27_C09.g1_A002 GA- or brassino... 339 4e-091
gb|CD221556.1|CD221556 CCC1_55_F09.g1_A007 Callus culture/c... 333 2e-089
gb|CD222883.1|CD222883 CCC1_24_C04.g1_A007 Callus culture/c... 333 2e-089
gb|CD223234.1|CD223234 CCC1_26_D09.g1_A007 Callus culture/c... 333 2e-089
gb|CD226602.1|CD226602 CCC1_46_E08.g1_A007 Callus culture/c... 333 2e-089
gb|CW119449.1|CW119449 104_496_11108775_116_34638_058 Sorgh... 329 4e-088
gb|AW924442.1|AW924442 WS1_69_C06.g1_A002 Water-stressed 1 ... 329 4e-088
gb|CD222500.1|CD222500 CCC1_22_B03.b1_A007 Callus culture/c... 329 4e-088
gb|CD226002.1|CD226002 CCC1_42_B03.g1_A007 Callus culture/c... 327 1e-087
gb|CD229697.1|CD229697 CCC1_18_D08.g1_A007 Callus culture/c... 327 1e-087
gb|BG464063.1|BG464063 EM1_69_B11.b1_A002 Embryo 1 (EM1) So... 325 6e-087
gb|CD221665.1|CD221665 CCC1_70_G05.b1_A007 Callus culture/c... 325 6e-087
gb|CD223041.1|CD223041 CCC1_25_F06.g1_A007 Callus culture/c... 325 6e-087
gb|BG049053.1|BG049053 OV1_22_F09.g1_A002 Ovary 1 (OV1) Sor... 323 2e-086
gb|CD463839.1|CD463839 ETH1_47_H03.b1_A002 Ethylene-treated... 323 2e-086
gb|CD463973.1|CD463973 ETH1_47_H03.g1_A002 Ethylene-treated... 323 2e-086
gb|CD222476.1|CD222476 CCC1_22_B04.b1_A007 Callus culture/c... 321 9e-086
gb|CF770982.1|CF770982 DSBF1_12_D05.g1_A010 Drought-stresse... 321 9e-086
gb|CD222692.1|CD222692 CCC1_23_G09.g1_A007 Callus culture/c... 317 1e-084
gb|CD229563.1|CD229563 CCC1_16_C07.g1_A007 Callus culture/c... 317 1e-084
gb|CN134928.1|CN134928 OX1_29_A10.g1_A002 Oxidatively-stres... 315 5e-084
gb|CD221837.1|CD221837 CCC1_71_F05.b1_A007 Callus culture/c... 313 2e-083
gb|CD223379.1|CD223379 CCC1_27_E04.g1_A007 Callus culture/c... 313 2e-083
gb|CD229903.1|CD229903 CCC1_20_C03.g1_A007 Callus culture/c... 309 3e-082
gb|CD431984.1|CD431984 ETH1_12_F04.b1_A002 Ethylene-treated... 309 3e-082
gb|CD223848.1|CD223848 CCC1_30_F03.g1_A007 Callus culture/c... 305 5e-081
gb|CD229365.1|CD229365 CCC1_14_D09.g1_A007 Callus culture/c... 305 5e-081
gb|CN135290.1|CN135290 OX1_31_G02.g1_A002 Oxidatively-stres... 305 5e-081
gb|CD423525.1|CD423525 SA1_23_C09.g1_A002 Salicylic acid-tr... 303 2e-080
gb|AW287001.2|AW287001 LG1_264_C03.b1_A002 Light Grown 1 (L... 299 3e-079
gb|BG102992.1|BG102992 RHIZ2_35_G08.b1_A003 Rhizome2 (RHIZ2... 299 3e-079
gb|CD220381.1|CD220381 CCC1_66_G11.g1_A007 Callus culture/c... 299 3e-079
gb|CD220480.1|CD220480 CCC1_67_F06.g1_A007 Callus culture/c... 299 3e-079
gb|CD220708.1|CD220708 CCC1_68_C10.g1_A007 Callus culture/c... 299 3e-079
gb|CD222029.1|CD222029 CCC1_1_C09.g1_A007 Callus culture/ce... 299 3e-079
gb|CD227763.1|CD227763 CCC1_53_C09.g1_A007 Callus culture/c... 297 1e-078
gb|CD228270.1|CD228270 CCC1_6_F02.g1_A007 Callus culture/ce... 297 1e-078
gb|CD226858.1|CD226858 CCC1_48_E04.g1_A007 Callus culture/c... 295 5e-078
gb|CD228252.1|CD228252 CCC1_6_E03.g1_A007 Callus culture/ce... 291 8e-077
gb|CD462568.1|CD462568 ETH1_38_G06.g1_A002 Ethylene-treated... 291 8e-077
gb|CW150340.1|CW150340 104_549_11142974_148_36301_051 Sorgh... 285 5e-075
gb|CW493211.1|CW493211 fsbb001f283n22k0 Sorghum methylation... 281 7e-074
gb|CD220677.1|CD220677 CCC1_68_C11.g1_A007 Callus culture/c... 280 3e-073
gb|CD224981.1|CD224981 CCC1_37_D02.g1_A007 Callus culture/c... 280 3e-073
gb|CD225687.1|CD225687 CCC1_40_B05.g1_A007 Callus culture/c... 280 3e-073
gb|CD223669.1|CD223669 CCC1_29_G02.g1_A007 Callus culture/c... 278 1e-072
gb|BG649146.1|BG649146 EM1_56_F01.b1_A002 Embryo 1 (EM1) So... 272 7e-071
gb|CN134927.1|CN134927 OX1_29_A09.g1_A002 Oxidatively-stres... 272 7e-071
gb|CD228767.1|CD228767 CCC1_9_D11.g1_A007 Callus culture/ce... 260 3e-067
gb|CW120215.1|CW120215 104_497_11109200_148_34647_024 Sorgh... 256 4e-066
gb|CW429227.1|CW429227 fsbb001f142f23f0 Sorghum methylation... 256 4e-066
gb|BG048760.1|BG048760 OV1_22_F09.b1_A002 Ovary 1 (OV1) Sor... 254 2e-065
gb|CW437319.1|CW437319 fsbb001f154g03k0 Sorghum methylation... 252 7e-065
gb|BE358239.1|BE358239 DG1_26_D03.b2_A002 Dark Grown 1 (DG1... 252 7e-065
gb|CD432032.1|CD432032 ETH1_12_F04.g1_A002 Ethylene-treated... 248 1e-063
gb|CD236439.1|CD236439 SS1_34_G03.b1_A012 Salt-stressed see... 246 4e-063
gb|CD229825.1|CD229825 CCC1_19_F11.g1_A007 Callus culture/c... 244 2e-062
gb|CN130309.1|CN130309 RHOH1_40_D04.g1_A002 Acid- and alkal... 240 3e-061
gb|CD220577.1|CD220577 CCC1_68_C11.b1_A007 Callus culture/c... 238 1e-060
gb|AW746206.1|AW746206 WS1_40_B10.b1_A002 Water-stressed 1 ... 234 2e-059
gb|AW922596.1|AW922596 DG1_46_C01.b1_A002 Dark Grown 1 (DG1... 234 2e-059
gb|BG047595.1|BG047595 OV1_25_H02.b1_A002 Ovary 1 (OV1) Sor... 230 2e-058
gb|CD222193.1|CD222193 CCC1_2_C04.g1_A007 Callus culture/ce... 224 2e-056
gb|CW280673.1|CW280673 104_756_11407748_148_35454_080 Sorgh... 220 2e-055
gb|CW039394.1|CW039394 104_272_10505475_115_30390 Sorghum m... 218 9e-055
gb|BE357497.1|BE357497 DG1_20_E06.b2_A002 Dark Grown 1 (DG1... 218 9e-055
gb|CL150624.1|CL150624 104_332_10778666_116_31358_218 Sorgh... 216 4e-054
gb|CW159280.1|CW159280 104_565_11149276_148_36409_010 Sorgh... 216 4e-054
gb|CW204755.1|CW204755 104_632_11186715_116_37060_002 Sorgh... 216 4e-054
gb|CW204756.1|CW204756 104_632_11186715_148_36922_002 Sorgh... 216 4e-054
gb|CW265114.1|CW265114 104_734_11231683_148_35261_076 Sorgh... 216 4e-054
gb|CW418572.1|CW418572 fsbb001f123b03f0 Sorghum methylation... 216 4e-054
gb|BG356189.1|BG356189 EM1_22_E10.b1_A002 Embryo 1 (EM1) So... 216 4e-054
gb|CW285684.1|CW285684 104_763_11410466_116_35510_013 Sorgh... 212 6e-053
gb|BG557755.1|BG557755 EM1_56_F01.g1_A002 Embryo 1 (EM1) So... 212 6e-053
gb|BE362915.2|BE362915 DG1_90_E12.g1_A002 Dark Grown 1 (DG1... 210 2e-052
gb|BG412507.1|BG412507 OV2_35_C01.g1_A002 Ovary 2 (OV2) Sor... 208 9e-052
gb|AW678309.1|AW678309 WS1_14_G01.g1_A002 Water-stressed 1 ... 206 4e-051
gb|CW159279.1|CW159279 104_565_11149276_116_36410_010 Sorgh... 204 1e-050
gb|CW265113.1|CW265113 104_734_11231683_116_35257_076 Sorgh... 202 6e-050
gb|CW069060.1|CW069060 104_318_10525580_1_30095 Sorghum met... 200 2e-049
gb|CW110423.1|CW110423 104_483_11103696_148_34524_094 Sorgh... 198 9e-049
gb|CW447826.1|CW447826 fsbb001f181b24f0 Sorghum methylation... 194 1e-047
gb|CD228772.1|CD228772 CCC1_9_D03.g1_A007 Callus culture/ce... 194 1e-047
gb|CW054562.1|CW054562 104_295_10516602_114_30186 Sorghum m... 190 2e-046
gb|AW746429.1|AW746429 WS1_53_G09.b1_A002 Water-stressed 1 ... 190 2e-046
gb|CW098316.1|CW098316 104_464_11002941_116_34362_083 Sorgh... 188 8e-046
gb|AW672289.1|AW672289 LG1_358_A05.b1_A002 Light Grown 1 (L... 188 8e-046
gb|BG463619.1|BG463619 EM1_50_H02.b1_A002 Embryo 1 (EM1) So... 188 8e-046
gb|BG556657.1|BG556657 EM1_37_H12.b1_A002 Embryo 1 (EM1) So... 188 8e-046
gb|CD221769.1|CD221769 CCC1_70_G05.g1_A007 Callus culture/c... 188 8e-046
gb|CD224256.1|CD224256 CCC1_32_A09.g1_A007 Callus culture/c... 188 8e-046
gb|CD224563.1|CD224563 CCC1_34_B01.g1_A007 Callus culture/c... 188 8e-046
gb|CD225689.1|CD225689 CCC1_40_H10.g1_A007 Callus culture/c... 188 8e-046
gb|CD229831.1|CD229831 CCC1_19_B02.g1_A007 Callus culture/c... 188 8e-046
gb|CD236461.1|CD236461 SS1_34_G03.g1_A012 Salt-stressed see... 188 8e-046
gb|CW231901.1|CW231901 104_681_11211372_148_37350_042 Sorgh... 184 1e-044
gb|CW285685.1|CW285685 104_763_11410466_148_35506_013 Sorgh... 184 1e-044
gb|CD224687.1|CD224687 CCC1_35_C12.g1_A007 Callus culture/c... 184 1e-044
gb|BG240334.1|BG240334 OV1_20_G04.b1_A002 Ovary 1 (OV1) Sor... 182 5e-044
gb|CF675624.1|CF675624 CHTN3 Subtractive cDNA library from ... 182 5e-044
gb|CD229074.1|CD229074 CCC1_11_B01.g1_A007 Callus culture/c... 180 2e-043
gb|CW448427.1|CW448427 fsbb001f182a11f0 Sorghum methylation... 172 5e-041
gb|CW493210.1|CW493210 fsbb001f283n22f0 Sorghum methylation... 172 5e-041
gb|CD226733.1|CD226733 CCC1_47_G08.g1_A007 Callus culture/c... 172 5e-041
gb|CW200665.1|CW200665 104_626_11184168_148_36867_092 Sorgh... 168 8e-040
gb|CW284180.1|CW284180 104_760_11409637_148_35487_049 Sorgh... 167 3e-039
gb|CW350033.1|CW350033 fsbb001f011c12f0 Sorghum methylation... 167 3e-039
gb|CW445566.1|CW445566 fsbb001f170m12f0 Sorghum methylation... 167 3e-039
gb|CW464036.1|CW464036 fsbb001f213a24k0 Sorghum methylation... 167 3e-039
gb|CW030154.1|CW030154 104_258_10500091_114_30403 Sorghum m... 161 2e-037
gb|CW065719.1|CW065719 104_312_10523301_114_30129 Sorghum m... 161 2e-037
gb|CW259984.1|CW259984 104_726_11228718_148_35189_023 Sorgh... 161 2e-037
gb|CW415388.1|CW415388 fsbb001f115h14f0 Sorghum methylation... 161 2e-037
gb|BG933438.1|BG933438 WS1_2_D11.b1_A002 Water-stressed 1 (... 161 2e-037
gb|CD224197.1|CD224197 CCC1_32_C12.g1_A007 Callus culture/c... 161 2e-037
gb|CL191324.1|CL191324 104_410_10906720_114_32533_060 Sorgh... 159 7e-037
gb|CW065720.1|CW065720 104_312_10523301_115_30130 Sorghum m... 159 7e-037
gb|AW679082.1|AW679082 WS1_22_B12.b1_A002 Water-stressed 1 ... 159 7e-037
gb|BG412816.1|BG412816 OV2_35_C01.b1_A002 Ovary 2 (OV2) Sor... 159 7e-037
gb|BG933439.1|BG933439 WS1_2_D12.b1_A002 Water-stressed 1 (... 159 7e-037
gb|CW394373.1|CW394373 fsbb001f081p01f0 Sorghum methylation... 155 1e-035
gb|BG412123.1|BG412123 OV2_38_C01.b1_A002 Ovary 2 (OV2) Sor... 153 5e-035
gb|CW056944.1|CW056944 104_298_10517953_114_30151 Sorghum m... 151 2e-034
gb|CW065716.1|CW065716 104_312_10523299_115_30130 Sorghum m... 151 2e-034
gb|CW324492.1|CW324492 104_819_11477191_148_35910_030 Sorgh... 151 2e-034
gb|CW363965.1|CW363965 fsbb001f035m22f0 Sorghum methylation... 151 2e-034
gb|CD221924.1|CD221924 CCC1_71_F05.g1_A007 Callus culture/c... 151 2e-034
gb|CD227568.1|CD227568 CCC1_52_A02.b1_A007 Callus culture/c... 151 2e-034
gb|CD224577.1|CD224577 CCC1_34_A01.g1_A007 Callus culture/c... 145 1e-032
gb|CD223287.1|CD223287 CCC1_27_C12.b1_A007 Callus culture/c... 135 1e-029
gb|CD223396.1|CD223396 CCC1_27_C12.g1_A007 Callus culture/c... 135 1e-029
gb|CW451829.1|CW451829 fsbb001f192b10k0 Sorghum methylation... 133 4e-029
gb|CD227591.1|CD227591 CCC1_52_A02.g1_A007 Callus culture/c... 133 4e-029
gb|CW246023.1|CW246023 104_706_11221179_148_37598_002 Sorgh... 127 3e-027
gb|CW230071.1|CW230071 104_671_11207654_116_37270_053 Sorgh... 125 1e-026
gb|CW405242.1|CW405242 fsbb001f097l13f0 Sorghum methylation... 125 1e-026
gb|BZ330961.1|BZ330961 hw03d05.g1 WGS-SbicolorF (JM107 adap... 115 1e-023
gb|CW284179.1|CW284179 104_760_11409637_116_35483_049 Sorgh... 115 1e-023
gb|CL158767.1|CL158767 104_347_10803772_114_31377_364 Sorgh... 111 2e-022
gb|CL158768.1|CL158768 104_347_10803772_116_31378_364 Sorgh... 111 2e-022
gb|CW231900.1|CW231900 104_681_11211372_116_37346_042 Sorgh... 111 2e-022
gb|CW318997.1|CW318997 104_811_11474252_148_35885_074 Sorgh... 111 2e-022
gb|CW357973.1|CW357973 fsbb001f024n22f0 Sorghum methylation... 111 2e-022
gb|AW746421.1|AW746421 WS1_53_B03.b1_A002 Water-stressed 1 ... 111 2e-022
gb|BE125999.1|BE125999 DG1_60_H07.b1_A002 Dark Grown 1 (DG1... 111 2e-022
gb|CW400945.1|CW400945 fsbb001f091i05f0 Sorghum methylation... 109 6e-022
gb|BE593437.1|BE593437 WS1_97_H03.b1_A002 Water-stressed 1 ... 105 1e-020
gb|CW324491.1|CW324491 104_819_11477191_116_35914_030 Sorgh... 100 6e-019
gb|CW400946.1|CW400946 fsbb001f091i05k0 Sorghum methylation... 100 6e-019
gb|AW923860.1|AW923860 DG1_60_H07.g1_A002 Dark Grown 1 (DG1... 100 6e-019
gb|BG047953.1|BG047953 OV1_25_H02.g1_A002 Ovary 1 (OV1) Sor... 98 2e-018
gb|CW275249.1|CW275249 104_748_11404861_116_35378_055 Sorgh... 96 9e-018
gb|BG411799.1|BG411799 OV2_38_C01.g1_A002 Ovary 2 (OV2) Sor... 96 9e-018
gb|BF507073.1|BF507073 17205P-8c Pooled green leaf and root... 90 6e-016
gb|CD223123.1|CD223123 CCC1_26_D09.b1_A007 Callus culture/c... 90 6e-016
gb|CN130235.1|CN130235 RHOH1_40_D04.b1_A002 Acid- and alkal... 88 2e-015
gb|CW277877.1|CW277877 104_752_11406259_148_35680_078 Sorgh... 84 4e-014
gb|BF507065.1|BF507065 17205P-2 Pooled green leaf and root ... 80 5e-013
gb|BI211225.1|BI211225 IP1_57_D08.b1_A002 Immature pannicle... 78 2e-012
gb|BZ338038.1|BZ338038 ia92e12.b1 WGS-SbicolorF (JM107 adap... 76 9e-012
gb|CW276618.1|CW276618 104_750_11405587_148_35398_074 Sorgh... 76 9e-012
gb|CW388024.1|CW388024 fsbb001f072j20f0 Sorghum methylation... 76 9e-012
gb|CW388025.1|CW388025 fsbb001f072j20k0 Sorghum methylation... 76 9e-012
gb|CL160721.1|CL160721 104_351_10805186_114_31824_242 Sorgh... 74 3e-011
gb|CW307372.1|CW307372 104_795_11468105_148_35736_073 Sorgh... 70 5e-010
gb|CW206617.1|CW206617 104_635_11187687_116_36961_058 Sorgh... 56 8e-006
gb|CW488277.1|CW488277 fsbb001f254j12f0 Sorghum methylation... 56 8e-006
gb|BE597800.1|BE597800 PI1_65_E11.g1_A002 Pathogen induced ... 56 8e-006
gb|BE598085.1|BE598085 PI1_65_E11.b1_A002 Pathogen induced ... 56 8e-006
gb|CW263590.1|CW263590 104_731_11230799_148_35217_082 Sorgh... 54 3e-005
gb|CN129927.1|CN129927 RHOH1_38_F07.b1_A002 Acid- and alkal... 54 3e-005
gb|CN130014.1|CN130014 RHOH1_38_F07.g1_A002 Acid- and alkal... 54 3e-005
gb|CW363966.1|CW363966 fsbb001f035m22k0 Sorghum methylation... 52 1e-004
gb|CW046146.1|CW046146 104_283_10509998_114_30137 Sorghum m... 50 5e-004
gb|CW425870.1|CW425870 fsbb001f137a05f0 Sorghum methylation... 50 5e-004
gb|CW302451.1|CW302451 104_786_11464725_148_35666_085 Sorgh... 48 0.002
gb|CW365832.1|CW365832 fsbb001f038i18f0 Sorghum methylation... 48 0.002
gb|BE597906.1|BE597906 PI1_66_H02.g1_A002 Pathogen induced ... 48 0.002
gb|BE598196.1|BE598196 PI1_66_H02.b1_A002 Pathogen induced ... 48 0.002
gb|CD228156.1|CD228156 CCC1_6_F02.b1_A007 Callus culture/ce... 48 0.002
gb|CW207919.1|CW207919 104_637_11188406_116_37044_059 Sorgh... 46 0.008
gb|CW430428.1|CW430428 fsbb001f144c05f0 Sorghum methylation... 46 0.008
gb|CD229172.1|CD229172 CCC1_13_C06.g1_A007 Callus culture/c... 46 0.008
gb|CF486597.1|CF486597 POL1_38_D07.g1_A002 Pollen Sorghum b... 46 0.008
gb|CN130329.1|CN130329 RHOH1_40_F08.g1_A002 Acid- and alkal... 46 0.008
gb|CN137353.1|CN137353 OX1_56_F03.g1_A002 Oxidatively-stres... 46 0.008
gb|CW350034.1|CW350034 fsbb001f011c12k0 Sorghum methylation... 44 0.030
gb|CW063076.1|CW063076 104_308_10521702_1_30092 Sorghum met... 42 0.12
gb|CW109840.1|CW109840 104_482_11103349_116_34511_059 Sorgh... 42 0.12
gb|CW160977.1|CW160977 104_567_11150166_116_36507_019 Sorgh... 42 0.12
gb|CW165762.1|CW165762 104_574_11152683_116_36482_012 Sorgh... 42 0.12
gb|CW202911.1|CW202911 104_629_11185351_116_36916_026 Sorgh... 42 0.12
gb|CW306925.1|CW306925 104_792_11467101_116_35711_083 Sorgh... 42 0.12
gb|CW362042.1|CW362042 fsbb001f030o20k0 Sorghum methylation... 42 0.12
gb|CW425918.1|CW425918 fsbb001f137b08f0 Sorghum methylation... 42 0.12
gb|CW431897.1|CW431897 fsbb001f146f15f0 Sorghum methylation... 42 0.12
gb|BE361299.1|BE361299 DG1_71_C03.b1_A002 Dark Grown 1 (DG1... 42 0.12
gb|CN125314.1|CN125314 RHOH1_10_G12.b1_A002 Acid- and alkal... 42 0.12
gb|CL161206.1|CL161206 104_352_10805558_116_31827_230 Sorgh... 40 0.47
gb|CW069198.1|CW069198 104_319_10525763_5_30099 Sorghum met... 40 0.47
gb|CW160952.1|CW160952 104_567_11150153_148_36417_069 Sorgh... 40 0.47
gb|CW206974.1|CW206974 104_635_11187870_148_36966_017 Sorgh... 40 0.47
gb|CW217088.1|CW217088 104_650_11195470_148_37135_093 Sorgh... 40 0.47
gb|CW217092.1|CW217092 104_650_11195472_148_37135_094 Sorgh... 40 0.47
gb|CW266083.1|CW266083 104_735_11232237_148_35267_085 Sorgh... 40 0.47
gb|CW429951.1|CW429951 fsbb001f143h07f0 Sorghum methylation... 40 0.47
gb|CW430429.1|CW430429 fsbb001f144c05k0 Sorghum methylation... 40 0.47
gb|BE358858.1|BE358858 DG1_32_F07.g1_A002 Dark Grown 1 (DG1... 40 0.47
gb|BG463392.1|BG463392 EM1_48_H11.g1_A002 Embryo 1 (EM1) So... 40 0.47
gb|BM328270.1|BM328270 PIC1_23_B02.g1_A002 Pathogen-infecte... 40 0.47
gb|CD429983.1|CD429983 ETH1_16_A10.g1_A002 Ethylene-treated... 40 0.47
gb|CF434207.1|CF434207 NIT1_32_B02.g1_A002 Nitrogen-deficie... 40 0.47
gb|CF486513.1|CF486513 POL1_38_D07.b1_A002 Pollen Sorghum b... 40 0.47
gb|CN137269.1|CN137269 OX1_56_F03.b1_A002 Oxidatively-stres... 40 0.47
>gb|BE363714.1|BE363714 WS1_69_C06.g2_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 705
Score = 644 bits (325), Expect = 0.0
Identities = 430/465 (92%)
Strand = Plus / Minus
Query: 307 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 366
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 470 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 411
Query: 367 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 426
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 410 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 351
Query: 427 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 486
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 350 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 291
Query: 487 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 546
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 290 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 231
Query: 547 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 606
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 230 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 171
Query: 607 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcg 666
|||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||| |
Sbjct: 170 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgctcgag 111
Query: 667 tcgcagtaggcgttgctcttgttgatctcgctgatgtagcagaaatgtccggtctcgtgc 726
||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 110 tcgcagtaggcgttgttcttgttgatctcgctgatgtagcagaaatgcccggtctcgtgg 51
Query: 727 gtgacgtgcgcgaagaaggcggcgatctcgcgcttgccctccacc 771
||||| || |||||||| ||||||||||||||||||||| |||||
Sbjct: 50 gtgacatgggcgaagaaagcggcgatctcgcgcttgcccgccacc 6
Score = 58.0 bits (29), Expect = 2e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 217 taaactcttggtttcgcgagggtgcgacgccgagcat 253
|||||||| |||||||||||||||||||||||||||
Sbjct: 549 taaactctgtgtttcgcgagggtgcgacgccgagcat 513
>gb|CD221995.1|CD221995 CCC1_1_C09.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_1_C09_A007 3', mRNA sequence
Length = 637
Score = 644 bits (325), Expect = 0.0
Identities = 430/465 (92%)
Strand = Plus / Minus
Query: 307 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 366
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 478 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 419
Query: 367 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 426
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 418 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 359
Query: 427 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 486
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 358 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 299
Query: 487 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 546
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 298 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 239
Query: 547 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 606
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 238 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 179
Query: 607 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcg 666
|||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||| |
Sbjct: 178 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgctcgag 119
Query: 667 tcgcagtaggcgttgctcttgttgatctcgctgatgtagcagaaatgtccggtctcgtgc 726
||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 118 tcgcagtaggcgttgttcttgttgatctcgctgatgtagcagaaatgcccggtctcgtgg 59
Query: 727 gtgacgtgcgcgaagaaggcggcgatctcgcgcttgccctccacc 771
||||| || |||||||| ||||||||||||||||||||| |||||
Sbjct: 58 gtgacatgggcgaagaaagcggcgatctcgcgcttgcccgccacc 14
Score = 58.0 bits (29), Expect = 2e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 217 taaactcttggtttcgcgagggtgcgacgccgagcat 253
|||||||| |||||||||||||||||||||||||||
Sbjct: 557 taaactctgtgtttcgcgagggtgcgacgccgagcat 521
>gb|CD222353.1|CD222353 CCC1_21_F09.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_21_F09_A007 3', mRNA sequence
Length = 647
Score = 644 bits (325), Expect = 0.0
Identities = 430/465 (92%)
Strand = Plus / Minus
Query: 307 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 366
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 488 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 429
Query: 367 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 426
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 428 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 369
Query: 427 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 486
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 368 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 309
Query: 487 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 546
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 308 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 249
Query: 547 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 606
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 248 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 189
Query: 607 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcg 666
|||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||| |
Sbjct: 188 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgctcgag 129
Query: 667 tcgcagtaggcgttgctcttgttgatctcgctgatgtagcagaaatgtccggtctcgtgc 726
||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 128 tcgcagtaggcgttgttcttgttgatctcgctgatgtagcagaaatgcccggtctcgtgg 69
Query: 727 gtgacgtgcgcgaagaaggcggcgatctcgcgcttgccctccacc 771
||||| || |||||||| ||||||||||||||||||||| |||||
Sbjct: 68 gtgacatgggcgaagaaagcggcgatctcgcgcttgcccgccacc 24
Score = 58.0 bits (29), Expect = 2e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 217 taaactcttggtttcgcgagggtgcgacgccgagcat 253
|||||||| |||||||||||||||||||||||||||
Sbjct: 567 taaactctgtgtttcgcgagggtgcgacgccgagcat 531
>gb|CD226631.1|CD226631 CCC1_47_H05.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_47_H05_A007 3', mRNA sequence
Length = 658
Score = 644 bits (325), Expect = 0.0
Identities = 427/461 (92%)
Strand = Plus / Minus
Query: 307 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 366
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 490 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 431
Query: 367 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 426
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 430 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 371
Query: 427 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 486
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 370 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 311
Query: 487 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 546
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 310 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 251
Query: 547 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 606
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 250 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 191
Query: 607 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcg 666
|||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||| |
Sbjct: 190 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgctcgag 131
Query: 667 tcgcagtaggcgttgctcttgttgatctcgctgatgtagcagaaatgtccggtctcgtgc 726
||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 130 tcgcagtaggcgttgttcttgttgatctcgctgatgtagcagaaatgcccggtctcgtgg 71
Query: 727 gtgacgtgcgcgaagaaggcggcgatctcgcgcttgccctc 767
||||| || |||||||| |||||||||||||||||||||||
Sbjct: 70 gtgacatgggcgaagaaagcggcgatctcgcgcttgccctc 30
Score = 67.9 bits (34), Expect = 2e-009
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 843 cttgccctcgcacccgctcccggcctggttcttgatgc 880
||||||||||||||||||| ||||||||||||||||||
Sbjct: 38 cttgccctcgcacccgctcgcggcctggttcttgatgc 1
Score = 58.0 bits (29), Expect = 2e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 217 taaactcttggtttcgcgagggtgcgacgccgagcat 253
|||||||| |||||||||||||||||||||||||||
Sbjct: 569 taaactctgtgtttcgcgagggtgcgacgccgagcat 533
>gb|AW680953.1|AW680953 WS1_9_A06.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 536
Score = 640 bits (323), Expect = 0.0
Identities = 425/459 (92%)
Strand = Plus / Minus
Query: 307 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 366
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 468 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 409
Query: 367 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 426
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 408 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 349
Query: 427 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 486
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 348 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 289
Query: 487 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 546
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 288 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 229
Query: 547 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 606
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 228 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 169
Query: 607 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcg 666
|||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||| |
Sbjct: 168 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgctcgag 109
Query: 667 tcgcagtaggcgttgctcttgttgatctcgctgatgtagcagaaatgtccggtctcgtgc 726
||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 108 tcgcagtaggcgttgttcttgttgatctcgctgatgtagcagaaatgcccggtctcgtgg 49
Query: 727 gtgacgtgcgcgaagaaggcggcgatctcgcgcttgccc 765
||||| || |||||||| |||||||||||||||||||||
Sbjct: 48 gtgacatgggcgaagaaagcggcgatctcgcgcttgccc 10
Score = 50.1 bits (25), Expect = 5e-004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 229 ttcgcgagggtgcgacgccgagcat 253
|||||||||||||||||||||||||
Sbjct: 535 ttcgcgagggtgcgacgccgagcat 511
>gb|CD225895.1|CD225895 CCC1_42_B03.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_42_B03_A007 3', mRNA sequence
Length = 653
Score = 636 bits (321), Expect = e-180
Identities = 429/465 (92%)
Strand = Plus / Minus
Query: 307 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 366
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 485 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 426
Query: 367 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 426
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 425 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 366
Query: 427 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 486
||||||||||||||||||||||| ||||||| |||||| | ||||||||||| | |||||
Sbjct: 365 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgtccgtccag 306
Query: 487 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 546
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 305 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 246
Query: 547 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 606
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 245 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 186
Query: 607 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcg 666
|||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||| |
Sbjct: 185 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgctcgag 126
Query: 667 tcgcagtaggcgttgctcttgttgatctcgctgatgtagcagaaatgtccggtctcgtgc 726
||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 125 tcgcagtaggcgttgttcttgttgatctcgctgatgtagcagaaatgcccggtctcgtgg 66
Query: 727 gtgacgtgcgcgaagaaggcggcgatctcgcgcttgccctccacc 771
||||| || |||||||| ||||||||||||||||||||| |||||
Sbjct: 65 gtgacatgggcgaagaaagcggcgatctcgcgcttgcccgccacc 21
Score = 58.0 bits (29), Expect = 2e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 217 taaactcttggtttcgcgagggtgcgacgccgagcat 253
|||||||| |||||||||||||||||||||||||||
Sbjct: 564 taaactctgtgtttcgcgagggtgcgacgccgagcat 528
>gb|BE918012.1|BE918012 OV1_8_G11.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 710
Score = 634 bits (320), Expect = e-180
Identities = 428/464 (92%)
Strand = Plus / Minus
Query: 308 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 367
||||||||||||||||||| || |||||||||| ||||||||||||||||||| ||||||
Sbjct: 563 cctagcaagtgaggttgggtccggggtcgacgccgagctgctggcagtactgcctgtagt 504
Query: 368 agccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttga 427
|||| || ||||||||||||||||| | || || |||||||||||||||||||||||||
Sbjct: 503 agcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttga 444
Query: 428 tggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccaga 487
|||||||||||||||||||||| ||||||| |||||| | |||||||||||| ||||||
Sbjct: 443 tggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttggtccaga 384
Query: 488 accagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcga 547
|||||||||||||||||||||||| ||||||||||||||||||||||| |||| |
Sbjct: 383 accagagcgccgtcttgaacgcgaccacggcgtcctgcgccaccctgtccgggttccgaa 324
Query: 548 gcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgca 607
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 323 gcccgtcgaagccgatgtccctcccggcaggcccgtagttgtagttccacgagatttgca 264
Query: 608 gcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcgt 667
||||||||||||||||||||||||| ||||| || |||||||||||||||||||||| ||
Sbjct: 263 gcgggccgcgcccgtagtacttctgacccgcggcacacggccactgcctgttgctcgagt 204
Query: 668 cgcagtaggcgttgctcttgttgatctcgctgatgtagcagaaatgtccggtctcgtgcg 727
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 cgcagtaggcgttgttcttgttgatctcgctgatgtagcagaaatgtccggtctcgtgcg 144
Query: 728 tgacgtgcgcgaagaaggcggcgatctcgcgcttgccctccacc 771
||| ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 143 tgatgtgggcgaagaaggcggcgatctcgcgcttgccctgcacc 100
Score = 127 bits (64), Expect = 3e-027
Identities = 67/68 (98%)
Strand = Plus / Minus
Query: 809 cggcgctcaggaacgcgctccgggtgtagaagttcttgccctcgcacccgctcccggcct 868
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 68 cggcgctcaggaacgcgctccgggtgtagaagttcttgccctcgcacccgttcccggcct 9
Query: 869 ggttcttg 876
||||||||
Sbjct: 8 ggttcttg 1
>gb|AY047607.1| Sorghum bicolor chitinase-B mRNA, partial cds
Length = 789
Score = 632 bits (319), Expect = e-179
Identities = 427/463 (92%)
Strand = Plus / Minus
Query: 309 ctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagta 368
|||||| |||||||||||||| |||||||||| ||||||| |||||||||||||||||||
Sbjct: 789 ctagcaggtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtagta 730
Query: 369 gccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttgat 428
||| || ||||||||||||||||| | || || ||||||||||||||||||||||||||
Sbjct: 729 gcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttgat 670
Query: 429 ggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccagaa 488
||||||||||||||||||||| ||||||| |||||| | ||||||||||||| ||||| |
Sbjct: 669 ggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccagta 610
Query: 489 ccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcgag 548
||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||
Sbjct: 609 ccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcgag 550
Query: 549 cccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgcag 608
|||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||||
Sbjct: 549 cccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgcag 490
Query: 609 cgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcgtc 668
|||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||| |||
Sbjct: 489 cgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgctcgagtc 430
Query: 669 gcagtaggcgttgctcttgttgatctcgctgatgtagcagaaatgtccggtctcgtgcgt 728
||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 429 gcagtaggcgttgttcttgttgatctcgctgatgtagcagaaatgcccggtctcgtgggt 370
Query: 729 gacgtgcgcgaagaaggcggcgatctcgcgcttgccctccacc 771
||| || |||||||| ||||||||||||||||||||| |||||
Sbjct: 369 gacatgggcgaagaaagcggcgatctcgcgcttgcccgccacc 327
Score = 188 bits (95), Expect = 8e-046
Identities = 131/143 (91%)
Strand = Plus / Minus
Query: 965 agcggcacgggcccgactggcacccgtcgccgcagtagtcgtcggtcgtgccgcagtagc 1024
||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |
Sbjct: 157 agcggcacgggcccgactggcacccgtcgccacagtagtcgtccgtcgtgccgcagtaac 98
Query: 1025 cgaacttgctgcagcagaagttaggctggcagccgcagttctgcgcggcggccgggccgg 1084
||||||||||||||||| | | ||||||||||||||||||||||||||||||| |||
Sbjct: 97 cgaacttgctgcagcagtaacctgcctggcagccgcagttctgcgcggcggccgggacgg 38
Query: 1085 cggcagcgcacaggagcgctagc 1107
|||||||||| ||||| ||||||
Sbjct: 37 cggcagcgcagaggagtgctagc 15
Score = 155 bits (78), Expect = 1e-035
Identities = 105/114 (92%)
Strand = Plus / Minus
Query: 804 gttgacggcgctcaggaacgcgctccgggtgtagaagttcttgccctcgcacccgctccc 863
|||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||| |
Sbjct: 300 gttggcggcgctcaggaacgcactcctggtgtagaagttcttgccctcgcacccgctcgc 241
Query: 864 ggcctggttcttgatgccgttgaagaacgcgtcgctgaccacgttagccacgtt 917
||||||||||||||||||||||||||| |||||| |||| ||| || |||||||
Sbjct: 240 ggcctggttcttgatgccgttgaagaatgcgtcggtgacaacgctacccacgtt 187
>gb|AY047608.1| Sorghum bicolor chitinase-B1 mRNA, complete cds
Length = 819
Score = 632 bits (319), Expect = e-179
Identities = 427/463 (92%)
Strand = Plus / Minus
Query: 309 ctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagta 368
||||||| ||||||||||||| |||||||||| ||||||| |||||||||||||||||||
Sbjct: 819 ctagcaaatgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtagta 760
Query: 369 gccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttgat 428
||| || ||||||||||||||||| | || || ||||||||||||||||||||||||||
Sbjct: 759 gcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttgat 700
Query: 429 ggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccagaa 488
||||||||||||||||||||| ||||||| |||||| | ||||||||||||| ||||| |
Sbjct: 699 ggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccagta 640
Query: 489 ccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcgag 548
||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||
Sbjct: 639 ccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcgag 580
Query: 549 cccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgcag 608
|||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||||
Sbjct: 579 cccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgcag 520
Query: 609 cgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcgtc 668
|||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||| |||
Sbjct: 519 cgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgctcgagtc 460
Query: 669 gcagtaggcgttgctcttgttgatctcgctgatgtagcagaaatgtccggtctcgtgcgt 728
||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 459 gcagtaggcgttgttcttgttgatctcgctgatgtagcagaaatgcccggtctcgtgggt 400
Query: 729 gacgtgcgcgaagaaggcggcgatctcgcgcttgccctccacc 771
||| || |||||||| ||||||||||||||||||||| |||||
Sbjct: 399 gacatgggcgaagaaagcggcgatctcgcgcttgcccgccacc 357
Score = 188 bits (95), Expect = 8e-046
Identities = 131/143 (91%)
Strand = Plus / Minus
Query: 965 agcggcacgggcccgactggcacccgtcgccgcagtagtcgtcggtcgtgccgcagtagc 1024
||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |
Sbjct: 187 agcggcacgggcccgactggcacccgtcgccacagtagtcgtccgtcgtgccgcagtaac 128
Query: 1025 cgaacttgctgcagcagaagttaggctggcagccgcagttctgcgcggcggccgggccgg 1084
||||||||||||||||| | | ||||||||||||||||||||||||||||||| |||
Sbjct: 127 cgaacttgctgcagcagtaacctgcctggcagccgcagttctgcgcggcggccgggacgg 68
Query: 1085 cggcagcgcacaggagcgctagc 1107
|||||||||| ||||| ||||||
Sbjct: 67 cggcagcgcagaggagtgctagc 45
Score = 155 bits (78), Expect = 1e-035
Identities = 105/114 (92%)
Strand = Plus / Minus
Query: 804 gttgacggcgctcaggaacgcgctccgggtgtagaagttcttgccctcgcacccgctccc 863
|||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||| |
Sbjct: 330 gttggcggcgctcaggaacgcactcctggtgtagaagttcttgccctcgcacccgctcgc 271
Query: 864 ggcctggttcttgatgccgttgaagaacgcgtcgctgaccacgttagccacgtt 917
||||||||||||||||||||||||||| |||||| |||| ||| || |||||||
Sbjct: 270 ggcctggttcttgatgccgttgaagaatgcgtcggtgacaacgctacccacgtt 217
Score = 52.0 bits (26), Expect = 1e-004
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 1120 gccaggatcctcggcgcgtttgccat 1145
||||||||||||||||||||||||||
Sbjct: 26 gccaggatcctcggcgcgtttgccat 1
>gb|BE363379.1|BE363379 WS1_62_C05.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 534
Score = 626 bits (316), Expect = e-177
Identities = 427/464 (92%)
Strand = Plus / Minus
Query: 308 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 367
|||| |||||||||||||| || |||||||||| ||||||||||||||||||| ||||||
Sbjct: 507 cctatcaagtgaggttgggtccggggtcgacgccgagctgctggcagtactgcctgtagt 448
Query: 368 agccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttga 427
|||| || ||||||||||||||||| | || || |||||||||||||||||||||||||
Sbjct: 447 agcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttga 388
Query: 428 tggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccaga 487
|||||||||||||||||||||| ||||||| |||||| | |||||||||||| ||||||
Sbjct: 387 tggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttggtccaga 328
Query: 488 accagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcga 547
|||||||||||||||||||||||| ||||||||||||||||||||||| |||| |
Sbjct: 327 accagagcgccgtcttgaacgcgaccacggcgtcctgcgccaccctgtccgggttccgaa 268
Query: 548 gcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgca 607
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 267 gcccgtcgaagccgatgtccctcccggcaggcccgtagttgtagttccacgagatttgca 208
Query: 608 gcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcgt 667
||||||||||||||||||||||||| ||||| || |||||||||||||||||||||| ||
Sbjct: 207 gcgggccgcgcccgtagtacttctgacccgcggcacacggccactgcctgttgctcgagt 148
Query: 668 cgcagtaggcgttgctcttgttgatctcgctgatgtagcagaaatgtccggtctcgtgcg 727
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 cgcagtaggcgttgttcttgttgatctcgctgatgtagcagaaatgtccggtctcgtgcg 88
Query: 728 tgacgtgcgcgaagaaggcggcgatctcgcgcttgccctccacc 771
||| ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 87 tgatgtgggcgaagaaggcggcgatctcgcgcttgccctgcacc 44
>gb|CD223183.1|CD223183 CCC1_26_G01.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_26_G01_A007 5', mRNA sequence
Length = 662
Score = 626 bits (316), Expect = e-177
Identities = 427/464 (92%)
Strand = Plus / Minus
Query: 308 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 367
||||||||||||||||||| || |||||||||| ||||||||||||||||||| ||||||
Sbjct: 574 cctagcaagtgaggttgggtccggggtcgacgccgagctgctggcagtactgcctgtagt 515
Query: 368 agccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttga 427
|||| || ||||||||||||||||| | || || |||||||||||||||||||||||||
Sbjct: 514 agcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttga 455
Query: 428 tggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccaga 487
|||||||||||||||||||||| ||||||| |||||| | |||||||||||| ||||||
Sbjct: 454 tggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttggtccaga 395
Query: 488 accagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcga 547
|||||||||||||||||||||||| ||||||||||||||||||||||| |||| |
Sbjct: 394 accagagcgccgtcttgaacgcgaccacggcgtcctgcgccaccctgtccgggttccgaa 335
Query: 548 gcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgca 607
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 334 gcccgtcgaagccgatgtccctcccggcaggcccgtagttgtagttccacgagatttgca 275
Query: 608 gcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcgt 667
||||||||||||||||||||||||| ||||| || |||||||||||||||||||||| ||
Sbjct: 274 gcgggccgcgcccgtagtacttctgacccgcggcacacggccactgcctgttgctcgagt 215
Query: 668 cgcagtaggcgttgctcttgttgatctcgctgatgtagcagaaatgtccggtctcgtgcg 727
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 cgcagtaggcgttgttcttgttgatctcgctgatgtagcagaaatgtccggtctcgtgcg 155
Query: 728 tgacgtgcgcgaagaaggcggcgatctcgcgcttgccctccacc 771
||| ||| |||||||||||||||| |||||||||||||| ||||
Sbjct: 154 tgatgtgggcgaagaaggcggcgacctcgcgcttgccctgcacc 111
Score = 127 bits (64), Expect = 3e-027
Identities = 70/72 (97%)
Strand = Plus / Minus
Query: 809 cggcgctcaggaacgcgctccgggtgtagaagttcttgccctcgcacccgctcccggcct 868
||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 79 cggcgctcaggaacgcgctccgggtgtagaagttcttgccctcacacccgttcccggcct 20
Query: 869 ggttcttgatgc 880
||||||||||||
Sbjct: 19 ggttcttgatgc 8
>gb|CN132942.1|CN132942 OX1_9_D11.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_9_D11_A002 3', mRNA sequence
Length = 812
Score = 626 bits (316), Expect = e-177
Identities = 427/464 (92%)
Strand = Plus / Minus
Query: 308 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 367
||||||||||||||||||| || |||||||||| ||||||||||||||||||| ||||||
Sbjct: 624 cctagcaagtgaggttgggtccggggtcgacgccgagctgctggcagtactgcctgtagt 565
Query: 368 agccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttga 427
|||| || ||||||||||||||||| | || || |||||||||||||||||||||||||
Sbjct: 564 agcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttga 505
Query: 428 tggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccaga 487
|||||||||||||||||||||| ||||||| |||||| | |||||||||||| ||||||
Sbjct: 504 tggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttggtccaga 445
Query: 488 accagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcga 547
|||||||||||||||||||||||| ||||||||| ||||||||||||| |||| |
Sbjct: 444 accagagcgccgtcttgaacgcgaccacggcgtcttgcgccaccctgtccgggttccgaa 385
Query: 548 gcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgca 607
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 384 gcccgtcgaagccgatgtccctcccggcaggcccgtagttgtagttccacgagatttgca 325
Query: 608 gcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcgt 667
||||||||||||||||||||||||| ||||| || |||||||||||||||||||||| ||
Sbjct: 324 gcgggccgcgcccgtagtacttctgacccgcggcacacggccactgcctgttgctcgagt 265
Query: 668 cgcagtaggcgttgctcttgttgatctcgctgatgtagcagaaatgtccggtctcgtgcg 727
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cgcagtaggcgttgttcttgttgatctcgctgatgtagcagaaatgtccggtctcgtgcg 205
Query: 728 tgacgtgcgcgaagaaggcggcgatctcgcgcttgccctccacc 771
||| ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 204 tgatgtgggcgaagaaggcggcgatctcgcgcttgccctgcacc 161
Score = 161 bits (81), Expect = 2e-037
Identities = 102/109 (93%)
Strand = Plus / Minus
Query: 809 cggcgctcaggaacgcgctccgggtgtagaagttcttgccctcgcacccgctcccggcct 868
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 129 cggcgctcaggaacgcgctccgggtgtagaagttcttgccctcgcacccgttcccggcct 70
Query: 869 ggttcttgatgccgttgaagaacgcgtcgctgaccacgttagccacgtt 917
|||||||||||| ||||||||| |||||| |||| ||| |||||||||
Sbjct: 69 ggttcttgatgctgttgaagaatgcgtcggtgacaacgccagccacgtt 21
Score = 48.1 bits (24), Expect = 0.002
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 132 attcaggtcgaacaaagtggctcagccccgtcgttttattatta 175
|||| ||| ||||||| |||||||||||| |||||||||||||
Sbjct: 794 attccggttgaacaaacgggctcagccccggcgttttattatta 751
>gb|BE918591.1|BE918591 OV1_8_G11.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 618
Score = 599 bits (302), Expect = e-169
Identities = 403/437 (92%)
Strand = Plus / Minus
Query: 335 cgacgcggagctgctggcagtactgcttgtagtagccgacgcgcgcgttcatctgggcgg 394
|||||| ||||||||||||||||||| |||||||||| || ||||||||||||||||| |
Sbjct: 618 cgacgccgagctgctggcagtactgcntgtagtagcccacccgcgcgttcatctgggcag 559
Query: 395 ggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagccct 454
|| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 558 tattcttgccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaacccct 499
Query: 455 gcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcgatca 514
||| |||||| | |||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 498 gcgacatcaccccgtgcacgttgttggtccagaaccagagcgccgtcttgaacgcgacca 439
Query: 515 cggcgtcctgcgccaccctgttggggtcggcgagcccgttgaagccgatgtccctcccgg 574
||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||
Sbjct: 438 cggcgtcctgcgccaccctgtccgggttccgaagcccgtcgaagccgatgtccctcccgg 379
Query: 575 cgggcccgtagttgtagttccacgagatctgcagcgggccgcgcccgtagtacttctgcc 634
| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 378 caggcccgtagttgtagttccacgagatttgcagcgggccgcgcccgtagtacttctgac 319
Query: 635 ccgccgcgcacggccactgcctgttgctcgcgtcgcagtaggcgttgctcttgttgatct 694
|||| || |||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 318 ccgcggcacacggccactgcctgttgctcgagtcgcagtaggcgttgttcttgttgatct 259
Query: 695 cgctgatgtagcagaaatgtccggtctcgtgcgtgacgtgcgcgaagaaggcggcgatct 754
|||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 258 cgctgatgtagcagaaatgtccggtctcgtgcgtgatgtgggcgaagaaggcggcgatct 199
Query: 755 cgcgcttgccctccacc 771
|||||||||||| ||||
Sbjct: 198 cgcgcttgccctgcacc 182
Score = 161 bits (81), Expect = 2e-037
Identities = 102/109 (93%)
Strand = Plus / Minus
Query: 809 cggcgctcaggaacgcgctccgggtgtagaagttcttgccctcgcacccgctcccggcct 868
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 150 cggcgctcaggaacgcgctccgggtgtagaagttcttgccctcgcacccgttcccggcct 91
Query: 869 ggttcttgatgccgttgaagaacgcgtcgctgaccacgttagccacgtt 917
|||||||||||| ||||||||| |||||| |||| ||| |||||||||
Sbjct: 90 ggttcttgatgctgttgaagaatgcgtcggtgacaacgccagccacgtt 42
>gb|CD464022.1|CD464022 ETH1_48_G10.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_48_G10_A002 3', mRNA sequence
Length = 690
Score = 589 bits (297), Expect = e-166
Identities = 393/425 (92%)
Strand = Plus / Minus
Query: 307 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 366
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 431 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 372
Query: 367 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 426
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 371 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 312
Query: 427 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 486
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 311 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 252
Query: 487 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 546
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 251 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 192
Query: 547 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 606
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 191 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 132
Query: 607 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcg 666
|| ||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||| |
Sbjct: 131 agtgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgctcgag 72
Query: 667 tcgcagtaggcgttgctcttgttgatctcgctgatgtagcagaaatgtccggtctcgtgc 726
||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 71 tcgcagtaggcgttgttcttgttgatctcgctgatgtagcagaaatgcccggtctcgtgg 12
Query: 727 gtgac 731
|||||
Sbjct: 11 gtgac 7
Score = 58.0 bits (29), Expect = 2e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 217 taaactcttggtttcgcgagggtgcgacgccgagcat 253
|||||||| |||||||||||||||||||||||||||
Sbjct: 510 taaactctgtgtttcgcgagggtgcgacgccgagcat 474
>gb|CN133023.1|CN133023 OX1_9_D11.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_9_D11_A002 5', mRNA sequence
Length = 837
Score = 585 bits (295), Expect = e-165
Identities = 400/435 (91%)
Strand = Plus / Minus
Query: 337 acgcggagctgctggcagtactgcttgtagtagccgacgcgcgcgttcatctgggcgggg 396
|||| ||||||||||||||||||| |||||||||| || ||||||||||||||||| |
Sbjct: 837 acgccgagctgctggcagtactgcctgtagtagcccacccgcgcgttcatctgggcagta 778
Query: 397 ttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagccctgc 456
|| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 777 ttcttgccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaacccctgc 718
Query: 457 ggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcgatcacg 516
| |||||| | |||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 717 gacatcaccccgtgcacgttgttggtccagaaccagagcgccgtcttgaacgcgaccacg 658
Query: 517 gcgtcctgcgccaccctgttggggtcggcgagcccgttgaagccgatgtccctcccggcg 576
||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||
Sbjct: 657 gcgtcttgcgccaccctgtccgggttccgaagcccgtcgaagccgatgtccctcccggca 598
Query: 577 ggcccgtagttgtagttccacgagatctgcagcgggccgcgcccgtagtacttctgcccc 636
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 597 ggcccgtagttgtagttccacgagatttgcagcgggccgcgcccgtagtacttctgaccc 538
Query: 637 gccgcgcacggccactgcctgttgctcgcgtcgcagtaggcgttgctcttgttgatctcg 696
|| || |||||||||||||||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 537 gcggcacacggccactgcctgttgctcgagtcgcagtaggcgttgttcttgttgatctcg 478
Query: 697 ctgatgtagcagaaatgtccggtctcgtgcgtgacgtgcgcgaagaaggcggcgatctcg 756
|||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 477 ctgatgtagcagaaatgtccggtctcgtgcgtgatgtgggcgaagaaggcggcgatctcg 418
Query: 757 cgcttgccctccacc 771
|||||||||| ||||
Sbjct: 417 cgcttgccctgcacc 403
Score = 161 bits (81), Expect = 2e-037
Identities = 102/109 (93%)
Strand = Plus / Minus
Query: 809 cggcgctcaggaacgcgctccgggtgtagaagttcttgccctcgcacccgctcccggcct 868
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 371 cggcgctcaggaacgcgctccgggtgtagaagttcttgccctcgcacccgttcccggcct 312
Query: 869 ggttcttgatgccgttgaagaacgcgtcgctgaccacgttagccacgtt 917
|||||||||||| ||||||||| |||||| |||| ||| |||||||||
Sbjct: 311 ggttcttgatgctgttgaagaatgcgtcggtgacaacgccagccacgtt 263
Score = 151 bits (76), Expect = 2e-034
Identities = 103/112 (91%)
Strand = Plus / Minus
Query: 965 agcggcacgggcccgactggcacccgtcgccgcagtagtcgtcggtcgtgccgcagtagc 1024
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 236 agcggcacgggcccgactggcacccgtcgccgcagtactcgtcggtcgtgccgcagtaac 177
Query: 1025 cgaacttgctgcagcagaagttaggctggcagccgcagttctgcgcggcggc 1076
||||||||||||||||| | | |||||||||| ||||||||||||||||
Sbjct: 176 cgaacttgctgcagcagtaacctgcctggcagccgtagttctgcgcggcggc 125
Score = 46.1 bits (23), Expect = 0.008
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 1120 gccaggatcctcggcgcgtttgccatactgg 1150
|||| ||||||||||||| ||||||||||||
Sbjct: 90 gccatgatcctcggcgcgattgccatactgg 60
>gb|BG101749.1|BG101749 EM1_5_G10.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 519
Score = 583 bits (294), Expect = e-164
Identities = 390/422 (92%)
Strand = Plus / Minus
Query: 350 ggcagtactgcttgtagtagccgacgcgcgcgttcatctgggcggggttgttcccgttgc 409
|||||||||||||||||||||| || ||||||||||||||||| | || || |||||||
Sbjct: 519 ggcagtactgcttgtagtagcccacccgcgcgttcatctgggcagtattcttgccgttgc 460
Query: 410 actcgagggcgccgttgatggccctgatggtggcgccgaagccctgcggcatcacacggt 469
|||||||||||||||||||||||||||||||||||||||| ||||||| |||||| | ||
Sbjct: 459 actcgagggcgccgttgatggccctgatggtggcgccgaacccctgcgacatcaccccgt 400
Query: 470 gcacgttgttcatccagaaccagagcgccgtcttgaacgcgatcacggcgtcctgcgcca 529
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gcacgttgttcgtccagtaccagagcgccgtcttgaacgcgatcacggcgtcctgcgcca 340
Query: 530 ccctgttggggtcggcgagcccgttgaagccgatgtccctcccggcgggcccgtagttgt 589
|| |||| |||| ||||||||||||||||||||| || ||||||| |||||||||||||
Sbjct: 339 ccttgttcgggttcgcgagcccgttgaagccgatggccttcccggcaggcccgtagttgt 280
Query: 590 agttccacgagatctgcagcgggccgcgcccgtagtacttctgccccgccgcgcacggcc 649
||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 279 agttccacgagatttgcagcgggccgcgcccgtagtacttctgtcccgcggcgcacggcc 220
Query: 650 actgcctgttgctcgcgtcgcagtaggcgttgctcttgttgatctcgctgatgtagcaga 709
||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 219 actgcttgttgctcgagtcgcagtaggcgttgttcttgttgatctcgctgatgtagcaga 160
Query: 710 aatgtccggtctcgtgcgtgacgtgcgcgaagaaggcggcgatctcgcgcttgccctcca 769
|||| ||||||||||| ||||| || |||||||| ||||||||||||||||||||| |||
Sbjct: 159 aatgcccggtctcgtgggtgacatgggcgaagaaagcggcgatctcgcgcttgcccgcca 100
Query: 770 cc 771
||
Sbjct: 99 cc 98
Score = 95.6 bits (48), Expect = 9e-018
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 804 gttgacggcgctcaggaacgcgctccgggtgtagaagttcttgccctcgcacccgctccc 863
|||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||| |
Sbjct: 71 gttggcggcgctcaggaacgcactcctggtgtagaagttcttgccctcgcacccgctcgc 12
Query: 864 ggcc 867
||||
Sbjct: 11 ggcc 8
>gb|CD220272.1|CD220272 CCC1_66_G11.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_66_G11_A007 3', mRNA sequence
Length = 614
Score = 581 bits (293), Expect = e-164
Identities = 392/425 (92%)
Strand = Plus / Minus
Query: 307 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 366
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 433 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 374
Query: 367 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 426
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 373 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 314
Query: 427 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 486
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 313 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 254
Query: 487 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 546
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 253 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 194
Query: 547 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 606
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 193 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 134
Query: 607 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcg 666
||||||||||||||||||||||||| ||||| ||||| ||||||||| ||||||||| |
Sbjct: 133 ggcgggccgcgcccgtagtacttctgtcccgcggcgcagggccactgcttgttgctcgag 74
Query: 667 tcgcagtaggcgttgctcttgttgatctcgctgatgtagcagaaatgtccggtctcgtgc 726
||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 73 tcgcagtaggcgttgttcttgttgatctcgctgatgtagcagaaatgcccggtctcgtgg 14
Query: 727 gtgac 731
|||||
Sbjct: 13 gtgac 9
Score = 58.0 bits (29), Expect = 2e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 217 taaactcttggtttcgcgagggtgcgacgccgagcat 253
|||||||| |||||||||||||||||||||||||||
Sbjct: 512 taaactctgtgtttcgcgagggtgcgacgccgagcat 476
>gb|AW746018.1|AW746018 WS1_38_H11.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 615
Score = 577 bits (291), Expect = e-163
Identities = 390/423 (92%)
Strand = Plus / Minus
Query: 308 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 367
||||||||||||||||||| || |||||||||| ||||||||||||||||||| ||||||
Sbjct: 431 cctagcaagtgaggttgggtccggggtcgacgccgagctgctggcagtactgcctgtagt 372
Query: 368 agccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttga 427
|||| || ||||||||||||||||| | || || |||||||||||||||||||||||||
Sbjct: 371 agcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttga 312
Query: 428 tggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccaga 487
|||||||||||||||||||||| ||||||| |||||| | |||||||||||| ||||||
Sbjct: 311 tggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttggtccaga 252
Query: 488 accagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcga 547
|||||||||||||||||||||||| ||||||||||||||||||||||| |||| |
Sbjct: 251 accagagcgccgtcttgaacgcgaccacggcgtcctgcgccaccctgtccgggttccgaa 192
Query: 548 gcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgca 607
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 191 gcccgtcgaagccgatgtccctcccggcaggcccgtagttgtagttccacgagatttgca 132
Query: 608 gcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcgt 667
||||||||||||||||||||||||| ||||| || |||||||||||||||||||||| ||
Sbjct: 131 gcgggccgcgcccgtagtacttctgacccgcggcacacggccactgcctgttgctcgagt 72
Query: 668 cgcagtaggcgttgctcttgttgatctcgctgatgtagcagaaatgtccggtctcgtgcg 727
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 cgcagtaggcgttgttcttgttgatctcgctgatgtagcagaaatgtccggtctcgtgcg 12
Query: 728 tga 730
|||
Sbjct: 11 tga 9
Score = 48.1 bits (24), Expect = 0.002
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 132 attcaggtcgaacaaagtggctcagccccgtcgttttattatta 175
|||| ||| ||||||| |||||||||||| |||||||||||||
Sbjct: 601 attccggttgaacaaacgggctcagccccggcgttttattatta 558
>gb|CD224094.1|CD224094 CCC1_32_C12.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_32_C12_A007 3', mRNA sequence
Length = 611
Score = 577 bits (291), Expect = e-163
Identities = 390/423 (92%)
Strand = Plus / Minus
Query: 308 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 367
||||||||||||||||||| || |||||||||| ||||||||||||||||||| ||||||
Sbjct: 431 cctagcaagtgaggttgggtccggggtcgacgccgagctgctggcagtactgcctgtagt 372
Query: 368 agccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttga 427
|||| || ||||||||||||||||| | || || |||||||||||||||||||||||||
Sbjct: 371 agcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttga 312
Query: 428 tggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccaga 487
|||||||||||||||||||||| ||||||| |||||| | |||||||||||| ||||||
Sbjct: 311 tggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttggtccaga 252
Query: 488 accagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcga 547
|||||||||||||||||||||||| ||||||||||||||||||||||| |||| |
Sbjct: 251 accagagcgccgtcttgaacgcgaccacggcgtcctgcgccaccctgtccgggttccgaa 192
Query: 548 gcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgca 607
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 191 gcccgtcgaagccgatgtccctcccggcaggcccgtagttgtagttccacgagatttgca 132
Query: 608 gcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcgt 667
||||||||||||||||||||||||| ||||| || |||||||||||||||||||||| ||
Sbjct: 131 gcgggccgcgcccgtagtacttctgacccgcggcacacggccactgcctgttgctcgagt 72
Query: 668 cgcagtaggcgttgctcttgttgatctcgctgatgtagcagaaatgtccggtctcgtgcg 727
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 cgcagtaggcgttgttcttgttgatctcgctgatgtagcagaaatgtccggtctcgtgcg 12
Query: 728 tga 730
|||
Sbjct: 11 tga 9
Score = 48.1 bits (24), Expect = 0.002
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 132 attcaggtcgaacaaagtggctcagccccgtcgttttattatta 175
|||| ||| ||||||| |||||||||||| |||||||||||||
Sbjct: 601 attccggttgaacaaacgggctcagccccggcgttttattatta 558
>gb|CD226332.1|CD226332 CCC1_45_F08.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_45_F08_A007 3', mRNA sequence
Length = 611
Score = 577 bits (291), Expect = e-163
Identities = 390/423 (92%)
Strand = Plus / Minus
Query: 308 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 367
||||||||||||||||||| || |||||||||| ||||||||||||||||||| ||||||
Sbjct: 431 cctagcaagtgaggttgggtccggggtcgacgccgagctgctggcagtactgcctgtagt 372
Query: 368 agccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttga 427
|||| || ||||||||||||||||| | || || |||||||||||||||||||||||||
Sbjct: 371 agcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttga 312
Query: 428 tggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccaga 487
|||||||||||||||||||||| ||||||| |||||| | |||||||||||| ||||||
Sbjct: 311 tggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttggtccaga 252
Query: 488 accagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcga 547
|||||||||||||||||||||||| ||||||||||||||||||||||| |||| |
Sbjct: 251 accagagcgccgtcttgaacgcgaccacggcgtcctgcgccaccctgtccgggttccgaa 192
Query: 548 gcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgca 607
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 191 gcccgtcgaagccgatgtccctcccggcaggcccgtagttgtagttccacgagatttgca 132
Query: 608 gcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcgt 667
||||||||||||||||||||||||| ||||| || |||||||||||||||||||||| ||
Sbjct: 131 gcgggccgcgcccgtagtacttctgacccgcggcacacggccactgcctgttgctcgagt 72
Query: 668 cgcagtaggcgttgctcttgttgatctcgctgatgtagcagaaatgtccggtctcgtgcg 727
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 cgcagtaggcgttgttcttgttgatctcgctgatgtagcagaaatgtccggtctcgtgcg 12
Query: 728 tga 730
|||
Sbjct: 11 tga 9
Score = 48.1 bits (24), Expect = 0.002
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 132 attcaggtcgaacaaagtggctcagccccgtcgttttattatta 175
|||| ||| ||||||| |||||||||||| |||||||||||||
Sbjct: 601 attccggttgaacaaacgggctcagccccggcgttttattatta 558
>gb|AW922735.1|AW922735 DG1_45_B06.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 645
Score = 555 bits (280), Expect = e-156
Identities = 370/400 (92%)
Strand = Plus / Minus
Query: 307 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 366
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 400 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 341
Query: 367 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 426
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 340 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 281
Query: 427 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 486
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 280 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 221
Query: 487 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 546
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 220 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggtttgcg 161
Query: 547 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 606
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 160 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 101
Query: 607 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcg 666
|||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||| |
Sbjct: 100 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgctcgag 41
Query: 667 tcgcagtaggcgttgctcttgttgatctcgctgatgtagc 706
|||||||| |||||| ||||||||||||||||||||||||
Sbjct: 40 tcgcagtaagcgttgttcttgttgatctcgctgatgtagc 1
Score = 58.0 bits (29), Expect = 2e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 217 taaactcttggtttcgcgagggtgcgacgccgagcat 253
|||||||| |||||||||||||||||||||||||||
Sbjct: 479 taaactctgtgtttcgcgagggtgcgacgccgagcat 443
>gb|CL160722.1|CL160722 104_351_10805186_116_31825_242 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10805186, DNA
sequence
Length = 711
Score = 541 bits (273), Expect = e-152
Identities = 372/405 (91%)
Strand = Plus / Minus
Query: 308 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 367
||||||||||||||||||| || |||||||||| ||||||||||||||||||| ||||||
Sbjct: 567 cctagcaagtgaggttgggtccggggtcgacgccgagctgctggcagtactgcctgtagt 508
Query: 368 agccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttga 427
|||| || ||||||||||||||||| | || || |||||||||||||||||||||||||
Sbjct: 507 agcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttga 448
Query: 428 tggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccaga 487
|||||||||||||||||||||| ||||||| |||||| | |||||||||||| ||||||
Sbjct: 447 tggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttggtccaga 388
Query: 488 accagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcga 547
|||||||||||||||||||||||| ||||||||||||||||||||||| |||| |
Sbjct: 387 accagagcgccgtcttgaacgcgaccacggcgtcctgcgccaccctgtccgggttccgaa 328
Query: 548 gcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgca 607
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 327 gcccgtcgaagccgatgtccctcccggcaggcccgtagttgtagttccacgagatttgca 268
Query: 608 gcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcgt 667
||||||||||||||||||||||||| ||||| || |||||||||||||||||||||| ||
Sbjct: 267 gcgggccgcgcccgtagtacttctgacccgcggcacacggccactgcctgttgctcgagt 208
Query: 668 cgcagtaggcgttgctcttgttgatctcgctgatgtagcagaaat 712
|||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 207 cgcagtaggcgttgttcttgttgatctcgctgatgtagcagaaat 163
>gb|CW365833.1|CW365833 fsbb001f038i18k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f038i18, DNA
sequence
Length = 831
Score = 541 bits (273), Expect = e-152
Identities = 372/405 (91%)
Strand = Plus / Minus
Query: 308 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 367
||||||||||||||||||| || |||||||||| ||||||||||||||||||| ||||||
Sbjct: 501 cctagcaagtgaggttgggtccggggtcgacgccgagctgctggcagtactgcctgtagt 442
Query: 368 agccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttga 427
|||| || ||||||||||||||||| | || || |||||||||||||||||||||||||
Sbjct: 441 agcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttga 382
Query: 428 tggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccaga 487
|||||||||||||||||||||| ||||||| |||||| | |||||||||||| ||||||
Sbjct: 381 tggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttggtccaga 322
Query: 488 accagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcga 547
|||||||||||||||||||||||| ||||||||||||||||||||||| |||| |
Sbjct: 321 accagagcgccgtcttgaacgcgaccacggcgtcctgcgccaccctgtccgggttccgaa 262
Query: 548 gcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgca 607
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 261 gcccgtcgaagccgatgtccctcccggcaggcccgtagttgtagttccacgagatttgca 202
Query: 608 gcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcgt 667
||||||||||||||||||||||||| ||||| || |||||||||||||||||||||| ||
Sbjct: 201 gcgggccgcgcccgtagtacttctgacccgcggcacacggccactgcctgttgctcgagt 142
Query: 668 cgcagtaggcgttgctcttgttgatctcgctgatgtagcagaaat 712
|||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 141 cgcagtaggcgttgttcttgttgatctcgctgatgtagcagaaat 97
Score = 48.1 bits (24), Expect = 0.002
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 132 attcaggtcgaacaaagtggctcagccccgtcgttttattatta 175
|||| ||| ||||||| |||||||||||| |||||||||||||
Sbjct: 671 attccggttgaacaaacgggctcagccccggcgttttattatta 628
>gb|AF402939.1|AF402939 Sorghum halepense chitinase-B gene, partial cds
Length = 922
Score = 539 bits (272), Expect = e-151
Identities = 371/404 (91%)
Strand = Plus / Minus
Query: 309 ctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagta 368
|||||| |||||||||||||| |||||||||| ||||||||||||||||||| |||||||
Sbjct: 922 ctagcaggtgaggttgggcccggggtcgacgccgagctgctggcagtactgcctgtagta 863
Query: 369 gccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttgat 428
||| || ||||| ||||||||||| | || |||||||||||||||||||||||||||||
Sbjct: 862 gcccacccgcgcattcatctgggcagtattcttcccgttgcactcgagggcgccgttgat 803
Query: 429 ggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccagaa 488
||| ||||||||||| ||||| ||||||| |||||| | |||||||||||| |||||||
Sbjct: 802 ggctctgatggtggcaccgaacccctgcgacatcaccccgtgcacgttgttggtccagaa 743
Query: 489 ccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcgag 548
||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 742 ccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgtccgggttccgaag 683
Query: 549 cccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgcag 608
||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 682 cccgtcgaagccgatgtccctcccggcaggcccgtagttgtagttccacgagatttgcag 623
Query: 609 cgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcgtc 668
|||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||
Sbjct: 622 cgggccgcgcccgtagtacttctgacccgcggcgcacggccactgcctgttgctcgagtc 563
Query: 669 gcagtaggcgttgctcttgttgatctcgctgatgtagcagaaat 712
||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 562 gcagtaggcgttgttcttgttgatctcgctgatgtagcagaaat 519
Score = 196 bits (99), Expect = 3e-048
Identities = 132/143 (92%)
Strand = Plus / Minus
Query: 965 agcggcacgggcccgactggcacccgtcgccgcagtagtcgtcggtcgtgccgcagtagc 1024
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 157 agcggcacgggcccgactggcacccgtcgccgcagtactcgtcggtcgtgccgcagtaac 98
Query: 1025 cgaacttgctgcagcagaagttaggctggcagccgcagttctgcgcggcggccgggccgg 1084
||||||||||||||||| | | |||||||||||||||||||||||||||| ||||||
Sbjct: 97 cgaacttgctgcagcagtaacctgcctggcagccgcagttctgcgcggcggccaggccgg 38
Query: 1085 cggcagcgcacaggagcgctagc 1107
|||||||||| ||||| ||||||
Sbjct: 37 cggcagcgcagaggagtgctagc 15
Score = 176 bits (89), Expect = 3e-042
Identities = 104/109 (95%)
Strand = Plus / Minus
Query: 809 cggcgctcaggaacgcgctccgggtgtagaagttcttgccctcgcacccgctcccggcct 868
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 292 cggcgctcaggaacgcgctccgggtgtagaagttcttgccctcgcacccgttcccggcct 233
Query: 869 ggttcttgatgccgttgaagaacgcgtcgctgaccacgttagccacgtt 917
|||||||||||||||||||||| |||||| |||| ||| ||||||||||
Sbjct: 232 ggttcttgatgccgttgaagaatgcgtcggtgacaacgctagccacgtt 184
Score = 101 bits (51), Expect = 1e-019
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 713 gtccggtctcgtgcgtgacgtgcgcgaagaaggcggcgatctcgcgcttgccctccacc 771
|||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 382 gtccggtctcgtgcgtgacgtgggcgaagaaggcggcgatctcgcgcttgccctgcacc 324
>gb|AW924422.1|AW924422 WS1_69_C06.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 511
Score = 533 bits (269), Expect = e-149
Identities = 344/369 (93%)
Strand = Plus / Minus
Query: 403 ccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaagccctgcggcatc 462
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 502 ccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaacccctgcgacatc 443
Query: 463 acacggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcgatcacggcgtcc 522
|| | ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 442 accccgtgcacgttgttcgtccagtaccagagcgccgtcttgaacgcgatcacggcgtcc 383
Query: 523 tgcgccaccctgttggggtcggcgagcccgttgaagccgatgtccctcccggcgggcccg 582
||||||||| |||| |||| ||||||||||||||||||||| || ||||||| ||||||
Sbjct: 382 tgcgccaccttgttcgggttcgcgagcccgttgaagccgatggccttcccggcaggcccg 323
Query: 583 tagttgtagttccacgagatctgcagcgggccgcgcccgtagtacttctgccccgccgcg 642
|||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||
Sbjct: 322 tagttgtagttccacgagatttgcagcgggccgcgcccgtagtacttctgtcccgcggcg 263
Query: 643 cacggccactgcctgttgctcgcgtcgcagtaggcgttgctcttgttgatctcgctgatg 702
|||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 262 cacggccactgcttgttgctcgagtcgcagtaggcgttgttcttgttgatctcgctgatg 203
Query: 703 tagcagaaatgtccggtctcgtgcgtgacgtgcgcgaagaaggcggcgatctcgcgcttg 762
||||||||||| ||||||||||| ||||| || |||||||| ||||||||||||||||||
Sbjct: 202 tagcagaaatgcccggtctcgtgggtgacatgggcgaagaaagcggcgatctcgcgcttg 143
Query: 763 ccctccacc 771
||| |||||
Sbjct: 142 cccgccacc 134
Score = 151 bits (76), Expect = 2e-034
Identities = 94/100 (94%)
Strand = Plus / Minus
Query: 804 gttgacggcgctcaggaacgcgctccgggtgtagaagttcttgccctcgcacccgctccc 863
|||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||| |
Sbjct: 107 gttggcggcgctcaggaacgcactcctggtgtagaagttcttgccctcgcacccgctcgc 48
Query: 864 ggcctggttcttgatgccgttgaagaacgcgtcgctgacc 903
||||||||||||||||||||||||||| |||||| |||||
Sbjct: 47 ggcctggttcttgatgccgttgaagaatgcgtcggtgacc 8
>gb|AF402938.1|AF402938 Sorghum arundinaceum chitinase-B gene, partial cds
Length = 922
Score = 531 bits (268), Expect = e-149
Identities = 370/404 (91%)
Strand = Plus / Minus
Query: 309 ctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagta 368
|||||| |||||||||||||| |||||||||| ||||||| |||||||||||||||||||
Sbjct: 922 ctagcaggtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtagta 863
Query: 369 gccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttgat 428
||| || ||||||||||||||||| | || |||||||||||||||||||||||||||||
Sbjct: 862 gcccacccgcgcgttcatctgggcagtattcttcccgttgcactcgagggcgccgttgat 803
Query: 429 ggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccagaa 488
||||||||||||||||||||| ||||||| |||||| | ||||||||||||| ||||| |
Sbjct: 802 ggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccagta 743
Query: 489 ccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcgag 548
||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||
Sbjct: 742 ccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcgag 683
Query: 549 cccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgcag 608
|||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||||
Sbjct: 682 cccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgcag 623
Query: 609 cgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcgtc 668
||||||||| |||||||||||||| ||||| ||||||||||||||| | ||||||| |||
Sbjct: 622 cgggccgcgtccgtagtacttctgtcccgcggcgcacggccactgcgtcttgctcgtgtc 563
Query: 669 gcagtaggcgttgctcttgttgatctcgctgatgtagcagaaat 712
||||||| || | ||||||||||||||||||||||||||||||
Sbjct: 562 acagtaggggtcgttcttgttgatctcgctgatgtagcagaaat 519
Score = 188 bits (95), Expect = 8e-046
Identities = 131/143 (91%)
Strand = Plus / Minus
Query: 965 agcggcacgggcccgactggcacccgtcgccgcagtagtcgtcggtcgtgccgcagtagc 1024
||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |
Sbjct: 157 agcggcacgggcccgactggcacccgtcgccacagtagtcgtccgtcgtgccgcagtaac 98
Query: 1025 cgaacttgctgcagcagaagttaggctggcagccgcagttctgcgcggcggccgggccgg 1084
||||||||||||||||| | | ||||||||||||||||||||||||||||||| |||
Sbjct: 97 cgaacttgctgcagcagtaacctgcctggcagccgcagttctgcgcggcggccgggacgg 38
Query: 1085 cggcagcgcacaggagcgctagc 1107
|||||||||| ||||| ||||||
Sbjct: 37 cggcagcgcagaggagtgctagc 15
Score = 155 bits (78), Expect = 1e-035
Identities = 105/114 (92%)
Strand = Plus / Minus
Query: 804 gttgacggcgctcaggaacgcgctccgggtgtagaagttcttgccctcgcacccgctccc 863
|||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||| |
Sbjct: 300 gttggcggcgctcaggaacgcactcctggtgtagaagttcttgccctcgcacccgctcgc 241
Query: 864 ggcctggttcttgatgccgttgaagaacgcgtcgctgaccacgttagccacgtt 917
||||||||||||||||||||||||||| |||||| |||| ||| || |||||||
Sbjct: 240 ggcctggttcttgatgccgttgaagaatgcgtcggtgacaacgctacccacgtt 187
Score = 73.8 bits (37), Expect = 3e-011
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 715 ccggtctcgtgcgtgacgtgcgcgaagaaggcggcgatctcgcgcttgccctccacc 771
||||||||||| ||||| || |||||||| ||||||||||||||||||||| |||||
Sbjct: 383 ccggtctcgtgggtgacatgggcgaagaaagcggcgatctcgcgcttgcccgccacc 327
>gb|CD226807.1|CD226807 CCC1_48_C11.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_48_C11_A007 3', mRNA sequence
Length = 598
Score = 519 bits (262), Expect = e-145
Identities = 361/394 (91%)
Strand = Plus / Minus
Query: 308 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 367
||||||||||||||||||| || |||||||||| ||||||||||||||||||| ||||||
Sbjct: 394 cctagcaagtgaggttgggtccggggtcgacgccgagctgctggcagtactgcctgtagt 335
Query: 368 agccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttga 427
|||| || ||||||||||||||||| | || || |||||||||||||||||||||||||
Sbjct: 334 agcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttga 275
Query: 428 tggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccaga 487
|||||||||||||||||||||| ||||||| |||||| | |||||||||||| ||||||
Sbjct: 274 tggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttggtccaga 215
Query: 488 accagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcga 547
|||||||||||||||||||||||| ||||||||||||||||||||||| |||| |
Sbjct: 214 accagagcgccgtcttgaacgcgaccacggcgtcctgcgccaccctgtccgggttccgaa 155
Query: 548 gcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgca 607
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 154 gcccgtcgaagccgatgtccctcccggcaggcccgtagttgtagttccacgagatttgca 95
Query: 608 gcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcgt 667
||||||||||||||||||||||||| ||||| || |||||||||||||||||||||| ||
Sbjct: 94 gcgggccgcgcccgtagtacttctgacccgcggcacacggccactgcctgttgctcgagt 35
Query: 668 cgcagtaggcgttgctcttgttgatctcgctgat 701
|||||||||||||| |||||||||||||||||||
Sbjct: 34 cgcagtaggcgttgttcttgttgatctcgctgat 1
Score = 48.1 bits (24), Expect = 0.002
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 132 attcaggtcgaacaaagtggctcagccccgtcgttttattatta 175
|||| ||| ||||||| |||||||||||| |||||||||||||
Sbjct: 564 attccggttgaacaaacgggctcagccccggcgttttattatta 521
>gb|AY048375.1| Sorghum bicolor chitinase-B gene, partial cds
Length = 927
Score = 515 bits (260), Expect = e-144
Identities = 368/404 (91%)
Strand = Plus / Minus
Query: 309 ctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagta 368
|||||| |||||||||||||| |||||||||| ||||||| |||||||||||||||||||
Sbjct: 927 ctagcaggtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtagta 868
Query: 369 gccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttgat 428
||| || ||||||||||||||||| | || || ||||||||||||||||||||||||||
Sbjct: 867 gcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttgat 808
Query: 429 ggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccagaa 488
||||||||||||||||||||| ||||||| |||||| | ||||||||||||| ||||| |
Sbjct: 807 ggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccagta 748
Query: 489 ccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcgag 548
||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||
Sbjct: 747 ccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcgag 688
Query: 549 cccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgcag 608
|||||||||||||||| || ||||||| |||||||||||||||| |||||| || | |||
Sbjct: 687 cccgttgaagccgatgcccttcccggcaggcccgtagttgtagtcccacgaaattttcag 628
Query: 609 cgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcgtc 668
||||||||| |||||||||||||| ||||| ||||||||||||||| | ||||||| |||
Sbjct: 627 cgggccgcgtccgtagtacttctgtcccgcggcgcacggccactgcgtcttgctcgagtc 568
Query: 669 gcagtaggcgttgctcttgttgatctcgctgatgtagcagaaat 712
||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 567 gcagtaggcgtcgttcttgttgatctcgctgatgtagcagaaat 524
Score = 188 bits (95), Expect = 8e-046
Identities = 131/143 (91%)
Strand = Plus / Minus
Query: 965 agcggcacgggcccgactggcacccgtcgccgcagtagtcgtcggtcgtgccgcagtagc 1024
||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |
Sbjct: 157 agcggcacgggcccgactggcacccgtcgccacagtagtcgtccgtcgtgccgcagtaac 98
Query: 1025 cgaacttgctgcagcagaagttaggctggcagccgcagttctgcgcggcggccgggccgg 1084
||||||||||||||||| | | ||||||||||||||||||||||||||||||| |||
Sbjct: 97 cgaacttgctgcagcagtaacctgcctggcagccgcagttctgcgcggcggccgggacgg 38
Query: 1085 cggcagcgcacaggagcgctagc 1107
|||||||||| ||||| ||||||
Sbjct: 37 cggcagcgcagaggagtgctagc 15
Score = 155 bits (78), Expect = 1e-035
Identities = 105/114 (92%)
Strand = Plus / Minus
Query: 804 gttgacggcgctcaggaacgcgctccgggtgtagaagttcttgccctcgcacccgctccc 863
|||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||| |
Sbjct: 300 gttggcggcgctcaggaacgcactcctggtgtagaagttcttgccctcgcacccgctcgc 241
Query: 864 ggcctggttcttgatgccgttgaagaacgcgtcgctgaccacgttagccacgtt 917
||||||||||||||||||||||||||| |||||| |||| ||| || |||||||
Sbjct: 240 ggcctggttcttgatgccgttgaagaatgcgtcggtgacaacgctacccacgtt 187
Score = 73.8 bits (37), Expect = 3e-011
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 715 ccggtctcgtgcgtgacgtgcgcgaagaaggcggcgatctcgcgcttgccctccacc 771
||||||||||| ||||| || |||||||| ||||||||||||||||||||| |||||
Sbjct: 383 ccggtctcgtgggtgacatgggcgaagaaagcggcgatctcgcgcttgcccgccacc 327
>gb|CW302450.1|CW302450 104_786_11464725_116_35662_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11464725, DNA
sequence
Length = 642
Score = 513 bits (259), Expect = e-143
Identities = 351/382 (91%)
Strand = Plus / Minus
Query: 331 gggtcgacgcggagctgctggcagtactgcttgtagtagccgacgcgcgcgttcatctgg 390
|||||||||| ||||||||||||||||||| |||||||||| || |||||||||||||||
Sbjct: 642 gggtcgacgccgagctgctggcagtactgcctgtagtagcccacccgcgcgttcatctgg 583
Query: 391 gcggggttgttcccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaag 450
|| | || || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 gcagtattcttgccgttgcactcgagggcgccgttgatggccctgatggtggcgccgaac 523
Query: 451 ccctgcggcatcacacggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcg 510
||||||| |||||| | |||||||||||| |||||||||||||||||||||||||||||
Sbjct: 522 ccctgcgacatcacnccgtgcacgttgttggtccagaaccagagcgccgtcttgaacgcg 463
Query: 511 atcacggcgtcctgcgccaccctgttggggtcggcgagcccgttgaagccgatgtccctc 570
| ||||||||||||||||||||||| |||| ||||||| ||||||||||||||||
Sbjct: 462 accacggcgtcctgcgccaccctgtccgggttccgaagcccgtcgaagccgatgtccctc 403
Query: 571 ccggcgggcccgtagttgtagttccacgagatctgcagcgggccgcgcccgtagtacttc 630
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 402 ccggcaggcccgtagttgtagttccacgagatttgcagcgggccgcgcccgtagtacttc 343
Query: 631 tgccccgccgcgcacggccactgcctgttgctcgcgtcgcagtaggcgttgctcttgttg 690
|| ||||| || |||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 342 tgacccgcggcacacggccactgcctgttgctcgagtcgcagtaggcgttgttcttgttg 283
Query: 691 atctcgctgatgtagcagaaat 712
||||||||||||||||||||||
Sbjct: 282 atctcgctgatgtagcagaaat 261
Score = 93.7 bits (47), Expect = 4e-017
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 713 gtccggtctcgtgcgtgacgtgcgcgaagaaggcggcgatctcgcgcttgccctccacc 771
|||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 111 gtccggtctcgtgcgtgatgtgggcgaagaaggcggcgatctcgcgcttgccctgcacc 53
Score = 42.1 bits (21), Expect = 0.12
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 809 cggcgctcaggaacgcgctcc 829
|||||||||||||||||||||
Sbjct: 21 cggcgctcaggaacgcgctcc 1
>gb|AW746695.1|AW746695 WS1_54_E02.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 575
Score = 511 bits (258), Expect = e-143
Identities = 342/370 (92%)
Strand = Plus / Minus
Query: 307 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 366
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 370 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 311
Query: 367 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 426
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 310 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 251
Query: 427 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 486
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 250 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 191
Query: 487 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 546
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 190 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 131
Query: 547 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 606
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 130 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 71
Query: 607 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcg 666
|||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||| |
Sbjct: 70 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgctcgag 11
Query: 667 tcgcagtagg 676
||||||||||
Sbjct: 10 tcgcagtagg 1
Score = 58.0 bits (29), Expect = 2e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 217 taaactcttggtttcgcgagggtgcgacgccgagcat 253
|||||||| |||||||||||||||||||||||||||
Sbjct: 449 taaactctgtgtttcgcgagggtgcgacgccgagcat 413
>gb|AW922776.1|AW922776 DG1_46_C01.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 737
Score = 511 bits (258), Expect = e-143
Identities = 429/486 (88%)
Strand = Plus / Minus
Query: 309 ctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagta 368
|||||| ||||||||| ||| |||||||||| || ||||||||||||||||||||||||
Sbjct: 534 ctagcaggtgaggttgctccccgggtcgacgccgaactgctggcagtactgcttgtagta 475
Query: 369 gccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttgat 428
||| || ||||||||||| || ||||||||||| ||||||||||||||||||||||| ||
Sbjct: 474 gcccacccgcgcgttcatttgcgcggggttgtttccgttgcactcgagggcgccgtttat 415
Query: 429 ggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccagaa 488
||| |||||||||||||| || ||||| |||||||| | |||||||||||||||||||||
Sbjct: 414 ggctctgatggtggcgccaaacccctgtggcatcaccccgtgcacgttgttcatccagaa 355
Query: 489 ccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcgag 548
||||||||||| |||||||||||||||||||||||||||||| || |||| ||||
Sbjct: 354 ccagagcgccgccttgaacgcgatcacggcgtcctgcgccacggcgtccgggttcccgag 295
Query: 549 cccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgcag 608
||||| |||||||||| | || || ||||||||||||||||||||||||||||||||
Sbjct: 294 cccgtcgaagccgatgctctgtcctgccggcccgtagttgtagttccacgagatctgcag 235
Query: 609 cgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcgtc 668
||||| | |||||||||||||||||||| |||||||||||||| ||| ||||| |||
Sbjct: 234 ggggcctcttccgtagtacttctgccccgcggcgcacggccactgtgtgtagctcgagtc 175
Query: 669 gcagtaggcgttgctcttgttgatctcgctgatgtagcagaaatgtccggtctcgtgcgt 728
|||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 174 acagtaggcgttgtccttgttgatctcgctaatgtagcagaaatgtccggtctcgtgtgt 115
Query: 729 gacgtgcgcgaagaaggcggcgatctcgcgcttgccctccacctccgtcccgccatgggc 788
| |||| ||||||||||||||||||||||||||||| || |||||| ||||| |||||
Sbjct: 114 ggcgtgagcgaagaaggcggcgatctcgcgcttgccgtcgtcctccgagccgccctgggc 55
Query: 789 gaagcc 794
||||||
Sbjct: 54 gaagcc 49
>gb|CD228493.1|CD228493 CCC1_8_E11.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_8_E11_A007 3', mRNA sequence
Length = 591
Score = 505 bits (255), Expect = e-141
Identities = 354/387 (91%)
Strand = Plus / Minus
Query: 308 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 367
||||||||||||||||||| || |||||||||| ||||||||||||||||||| ||||||
Sbjct: 387 cctagcaagtgaggttgggtccggggtcgacgccgagctgctggcagtactgcctgtagt 328
Query: 368 agccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttga 427
|||| || ||||||||||||||||| | || || |||||||||||||||||||||||||
Sbjct: 327 agcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttga 268
Query: 428 tggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccaga 487
|||||||||||||||||||||| ||||||| |||||| | |||||||||||| ||||||
Sbjct: 267 tggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttggtccaga 208
Query: 488 accagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcga 547
|||||||||||||||||||||||| ||||||||||||||||||||||| |||| |
Sbjct: 207 accagagcgccgtcttgaacgcgaccacggcgtcctgcgccaccctgtccgggttccgaa 148
Query: 548 gcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgca 607
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 147 gcccgtcgaagccgatgtccctcccggcaggcccgtagttgtagttccacgagatttgca 88
Query: 608 gcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcgt 667
||||||||||||||||||||||||| ||||| || |||||||||||||||||||||| ||
Sbjct: 87 gcgggccgcgcccgtagtacttctgacccgcggcacacggccactgcctgttgctcgagt 28
Query: 668 cgcagtaggcgttgctcttgttgatct 694
|||||||||||||| ||||||||||||
Sbjct: 27 cgcagtaggcgttgttcttgttgatct 1
Score = 48.1 bits (24), Expect = 0.002
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 132 attcaggtcgaacaaagtggctcagccccgtcgttttattatta 175
|||| ||| ||||||| |||||||||||| |||||||||||||
Sbjct: 557 attccggttgaacaaacgggctcagccccggcgttttattatta 514
>gb|AW745819.1|AW745819 WS1_37_H11.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 590
Score = 504 bits (254), Expect = e-140
Identities = 368/406 (90%)
Strand = Plus / Minus
Query: 308 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 367
||||||||||||||||||| || |||||||||| ||||||||||||||||||| ||||||
Sbjct: 406 cctagcaagtgaggttgggtccggggtcgacgccgagctgctggcagtactgcctgtagt 347
Query: 368 agccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttga 427
| || || ||||||||||||||||| | || || |||||||||||||||||||||||||
Sbjct: 346 aacccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttga 287
Query: 428 tggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccaga 487
|||||||||||||||||||||| ||||||| |||||| | |||||||||||| ||||||
Sbjct: 286 tggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttggtccaga 227
Query: 488 accagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcga 547
|||| ||||||| |||||||||| ||||||||||||||||||||||| |||| |
Sbjct: 226 accaaagcgccgggttgaacgcgaccacggcgtcctgcgccaccctgtccgggttccgaa 167
Query: 548 gcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgca 607
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 166 gcccgtcgaagccgatgtccctcccggcaggcccgtagttgtagttccacgagatttgca 107
Query: 608 gcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcgt 667
|||||||| |||||||||||||||| ||||| || |||||||||||||||||||||| ||
Sbjct: 106 gcgggccgggcccgtagtacttctgacccgcggcacacggccactgcctgttgctcgagt 47
Query: 668 cgcagtaggcgttgctcttgttgatctcgctgatgtagcagaaatg 713
|||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 46 cgcagtaggcgttgctcttggtgatctcgctgatgtagcagaaatg 1
Score = 48.1 bits (24), Expect = 0.002
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 132 attcaggtcgaacaaagtggctcagccccgtcgttttattatta 175
|||| ||| ||||||| |||||||||||| |||||||||||||
Sbjct: 576 attccggttgaacaaacgggctcagccccggcgttttattatta 533
>gb|CX610007.1|CX610007 ANR1_16_C10.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_16_C10_A002 3', mRNA sequence
Length = 714
Score = 504 bits (254), Expect = e-140
Identities = 428/486 (88%)
Strand = Plus / Minus
Query: 309 ctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagta 368
|||||| ||||||||| ||| |||||||||| || ||||||||||||||||||||||||
Sbjct: 662 ctagcaggtgaggttgctccccgggtcgacgccgaactgctggcagtactgcttgtagta 603
Query: 369 gccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttgat 428
||| || ||||||||||| || ||||||||||| ||||||||||||||||||||||| ||
Sbjct: 602 gcccacccgcgcgttcatttgcgcggggttgtttccgttgcactcgagggcgccgtttat 543
Query: 429 ggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccagaa 488
||| |||||||||||||| || ||||| |||||||| | |||||||||||||||||||||
Sbjct: 542 ggctctgatggtggcgccaaacccctgtggcatcaccccgtgcacgttgttcatccagaa 483
Query: 489 ccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcgag 548
||||||||||| |||||||||||||||||||||||||||||| || |||| ||||
Sbjct: 482 ccagagcgccgccttgaacgcgatcacggcgtcctgcgccacggcgtccgggttcccgag 423
Query: 549 cccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgcag 608
||||| |||||||||| | || || ||||||||||||||||||||||||||||||||
Sbjct: 422 cccgtcgaagccgatgctctgtcctgccggcccgtagttgtagttccacgagatctgcag 363
Query: 609 cgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcgtc 668
||||| | |||||||||||||||||||| |||||||||||||| ||| ||||| |||
Sbjct: 362 ggggcctcttccgtagtacttctgccccgcggcgcacggccactgtgtgtagctcgagtc 303
Query: 669 gcagtaggcgttgctcttgttgatctcgctgatgtagcagaaatgtccggtctcgtgcgt 728
|||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 302 acagtaggcgttgtccttgttgatctcgctaatgtagcagaaatgtccggtctcgtgtgt 243
Query: 729 gacgtgcgcgaagaaggcggcgatctcgcgcttgccctccacctccgtcccgccatgggc 788
| |||| ||||| ||||||||||||||||||||||| || |||||| ||||| |||||
Sbjct: 242 ggcgtgagcgaaaaaggcggcgatctcgcgcttgccgtcgtcctccgagccgccctgggc 183
Query: 789 gaagcc 794
||||||
Sbjct: 182 gaagcc 177
Score = 109 bits (55), Expect = 6e-022
Identities = 88/99 (88%)
Strand = Plus / Minus
Query: 811 gcgctcaggaacgcgctccgggtgtagaagttcttgccctcgcacccgctcccggcctgg 870
||||||||||||||| || | ||||||||| ||||||||||||| || |||||||||
Sbjct: 154 gcgctcaggaacgcgtcgcgcgagtagaagttgctgccctcgcacccacttccggcctgg 95
Query: 871 ttcttgatgccgttgaagaacgcgtcgctgaccacgtta 909
||||||||||||||||||||||||||| |||| ||||||
Sbjct: 94 ttcttgatgccgttgaagaacgcgtcggtgacgacgtta 56
>gb|CX613448.1|CX613448 GABR1_8_E12.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_8_E12_A002 3', mRNA sequence
Length = 722
Score = 504 bits (254), Expect = e-140
Identities = 428/486 (88%)
Strand = Plus / Minus
Query: 309 ctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagta 368
|||||| ||||||||| ||| |||||||||| || ||||||||||||||||||||||||
Sbjct: 512 ctagcaggtgaggttgctccccgggtcgacgccgaactgctggcagtactgcttgtagta 453
Query: 369 gccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttgat 428
||| || ||||||||||| || ||||||||||| ||||||||||||||||||||||| ||
Sbjct: 452 gcccacccgcgcgttcatttgcgcggggttgtttccgttgcactcgagggcgccgtttat 393
Query: 429 ggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccagaa 488
||| |||||||||||||| || ||||| |||||||| | |||||||||||||||||||||
Sbjct: 392 ggctctgatggtggcgccaaacccctgtggcatcaccccgtgcacgttgttcatccagaa 333
Query: 489 ccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcgag 548
||||||||||| |||||||||||||||||||||||||||||| || |||| ||||
Sbjct: 332 ccagagcgccgccttgaacgcgatcacggcgtcctgcgccacggcgtccgggttcccgag 273
Query: 549 cccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgcag 608
||||| |||||||||| | || || ||||||||||||||||||||||||||||||||
Sbjct: 272 cccgtcgaagccgatgctctgtcctgccggcccgtagttgtagttccacgagatctgcag 213
Query: 609 cgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcgtc 668
||||| | |||||||||||||||||||| |||||||||||||| ||| ||||| |||
Sbjct: 212 ggggcctcttccgtagtacttctgccccgcggcgcacggccactgtgtgtagctcgagtc 153
Query: 669 gcagtaggcgttgctcttgttgatctcgctgatgtagcagaaatgtccggtctcgtgcgt 728
|||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 152 acagtaggcgttgtccttgttgatctcgctaatgtagcagaaatgtccggtctcgtgtgt 93
Query: 729 gacgtgcgcgaagaaggcggcgatctcgcgcttgccctccacctccgtcccgccatgggc 788
| |||| ||||| ||||||||||||||||||||||| || |||||| ||||| |||||
Sbjct: 92 ggcgtgagcgaaaaaggcggcgatctcgcgcttgccgtcgtcctccgagccgccctgggc 33
Query: 789 gaagcc 794
||||||
Sbjct: 32 gaagcc 27
>gb|CN151360.1|CN151360 WOUND1_75_B02.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_75_B02_A002 3', mRNA sequence
Length = 715
Score = 498 bits (251), Expect = e-139
Identities = 429/487 (88%), Gaps = 1/487 (0%)
Strand = Plus / Minus
Query: 309 ctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagta 368
|||||| ||||||||| ||| |||||||||| || ||||||||||||||||||||||||
Sbjct: 510 ctagcaggtgaggttgctccccgggtcgacgccgaactgctggcagtactgcttgtagta 451
Query: 369 gccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttgat 428
||| || ||||||||||| || ||||||||||| ||||||||||||||||||||||| ||
Sbjct: 450 gcccacccgcgcgttcatttgcgcggggttgtttccgttgcactcgagggcgccgtttat 391
Query: 429 ggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccagaa 488
||| |||||||||||||| || ||||| |||||||| | |||||||||||||||||||||
Sbjct: 390 ggctctgatggtggcgccaaacccctgtggcatcaccccgtgcacgttgttcatccagaa 331
Query: 489 ccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcgag 548
||||||||||| |||||||||||||||||||||||||||||| || |||| ||||
Sbjct: 330 ccagagcgccgccttgaacgcgatcacggcgtcctgcgccacggcgtccgggttcccgag 271
Query: 549 cccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgcag 608
||||| |||||||||| | || || ||||||||||||||||||||||||||||||||
Sbjct: 270 cccgtcgaagccgatgctctgtcctgccggcccgtagttgtagttccacgagatctgcag 211
Query: 609 cgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcgtc 668
||||| | |||||||||||||||||||| |||||||||||||| ||| ||||| |||
Sbjct: 210 ggggcctcttccgtagtacttctgccccgcggcgcacggccactgtgtgtagctcgagtc 151
Query: 669 gcagtaggcgttgctcttgttgatctcgctgatgtagcagaaatgtccggtctcgtgcgt 728
|||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 150 acagtaggcgttgtccttgttgatctcgctaatgtagcagaaatgtccggtctcgtgtgt 91
Query: 729 gacgtgcgcgaagaa-ggcggcgatctcgcgcttgccctccacctccgtcccgccatggg 787
| |||| |||||||| ||||||||||||||||||||| || |||||| ||||| ||||
Sbjct: 90 ggcgtgagcgaagaacggcggcgatctcgcgcttgccgtcgtcctccgagccgccctggg 31
Query: 788 cgaagcc 794
|||||||
Sbjct: 30 cgaagcc 24
>gb|BG556500.1|BG556500 EM1_37_H12.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 441
Score = 494 bits (249), Expect = e-137
Identities = 330/357 (92%)
Strand = Plus / Minus
Query: 307 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 366
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 357 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 298
Query: 367 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 426
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 297 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 238
Query: 427 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 486
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 237 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 178
Query: 487 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 546
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 177 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 118
Query: 547 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 606
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 117 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 58
Query: 607 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctc 663
|||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||
Sbjct: 57 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgctc 1
Score = 58.0 bits (29), Expect = 2e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 217 taaactcttggtttcgcgagggtgcgacgccgagcat 253
|||||||| |||||||||||||||||||||||||||
Sbjct: 436 taaactctgtgtttcgcgagggtgcgacgccgagcat 400
>gb|CD223269.1|CD223269 CCC1_27_E04.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_27_E04_A007 3', mRNA sequence
Length = 605
Score = 492 bits (248), Expect = e-137
Identities = 329/356 (92%)
Strand = Plus / Minus
Query: 307 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 366
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 356 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 297
Query: 367 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 426
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 296 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 237
Query: 427 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 486
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 236 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 177
Query: 487 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 546
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 176 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 117
Query: 547 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 606
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 116 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 57
Query: 607 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgct 662
|||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||
Sbjct: 56 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgct 1
Score = 58.0 bits (29), Expect = 2e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 217 taaactcttggtttcgcgagggtgcgacgccgagcat 253
|||||||| |||||||||||||||||||||||||||
Sbjct: 435 taaactctgtgtttcgcgagggtgcgacgccgagcat 399
>gb|CD227859.1|CD227859 CCC1_56_F04.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_56_F04_A007 3', mRNA sequence
Length = 622
Score = 492 bits (248), Expect = e-137
Identities = 329/356 (92%)
Strand = Plus / Minus
Query: 307 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 366
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 356 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 297
Query: 367 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 426
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 296 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 237
Query: 427 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 486
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 236 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 177
Query: 487 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 546
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 176 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 117
Query: 547 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 606
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 116 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 57
Query: 607 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgct 662
|||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||
Sbjct: 56 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgct 1
Score = 58.0 bits (29), Expect = 2e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 217 taaactcttggtttcgcgagggtgcgacgccgagcat 253
|||||||| |||||||||||||||||||||||||||
Sbjct: 435 taaactctgtgtttcgcgagggtgcgacgccgagcat 399
>gb|CD228687.1|CD228687 CCC1_9_D03.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_9_D03_A007 3', mRNA sequence
Length = 621
Score = 492 bits (248), Expect = e-137
Identities = 329/356 (92%)
Strand = Plus / Minus
Query: 307 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 366
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 356 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 297
Query: 367 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 426
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 296 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 237
Query: 427 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 486
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 236 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 177
Query: 487 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 546
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 176 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 117
Query: 547 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 606
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 116 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 57
Query: 607 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgct 662
|||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||
Sbjct: 56 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgct 1
Score = 58.0 bits (29), Expect = 2e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 217 taaactcttggtttcgcgagggtgcgacgccgagcat 253
|||||||| |||||||||||||||||||||||||||
Sbjct: 435 taaactctgtgtttcgcgagggtgcgacgccgagcat 399
>gb|CD220455.1|CD220455 CCC1_67_F06.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_67_F06_A007 3', mRNA sequence
Length = 594
Score = 490 bits (247), Expect = e-136
Identities = 334/363 (92%)
Strand = Plus / Minus
Query: 307 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 366
||||| ||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 363 gcctaacaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 304
Query: 367 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 426
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 303 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 244
Query: 427 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 486
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 243 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 184
Query: 487 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 546
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 183 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 124
Query: 547 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 606
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 123 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 64
Query: 607 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcg 666
|||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||| |
Sbjct: 63 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgctcgag 4
Query: 667 tcg 669
|||
Sbjct: 3 tcg 1
Score = 50.1 bits (25), Expect = 5e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 217 taaactcttggtttcgcgagggtgcgacgccgagcat 253
|||||||| ||||||||||||||||||||| |||||
Sbjct: 442 taaactctgtgtttcgcgagggtgcgacgcccagcat 406
>gb|CD225586.1|CD225586 CCC1_40_H10.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_40_H10_A007 3', mRNA sequence
Length = 526
Score = 488 bits (246), Expect = e-136
Identities = 330/358 (92%)
Strand = Plus / Minus
Query: 307 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 366
|||||||||| |||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 358 gcctagcaagcgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 299
Query: 367 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 426
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 298 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 239
Query: 427 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 486
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 238 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 179
Query: 487 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 546
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 178 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 119
Query: 547 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 606
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 118 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 59
Query: 607 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcg 664
|||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||
Sbjct: 58 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgctcg 1
Score = 58.0 bits (29), Expect = 2e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 217 taaactcttggtttcgcgagggtgcgacgccgagcat 253
|||||||| |||||||||||||||||||||||||||
Sbjct: 437 taaactctgtgtttcgcgagggtgcgacgccgagcat 401
>gb|CD222930.1|CD222930 CCC1_25_F06.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_25_F06_A007 3', mRNA sequence
Length = 612
Score = 486 bits (245), Expect = e-135
Identities = 336/365 (92%), Gaps = 1/365 (0%)
Strand = Plus / Minus
Query: 307 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 366
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 364 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 305
Query: 367 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 426
||||| || ||||||||||||||||| | || || |||||||||||| |||||||||||
Sbjct: 304 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcg-gggcgccgttg 246
Query: 427 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 486
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 245 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 186
Query: 487 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 546
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 185 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 126
Query: 547 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 606
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 125 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 66
Query: 607 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgctcgcg 666
|||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||| |
Sbjct: 65 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgctcgag 6
Query: 667 tcgca 671
|||||
Sbjct: 5 tcgca 1
Score = 58.0 bits (29), Expect = 2e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 217 taaactcttggtttcgcgagggtgcgacgccgagcat 253
|||||||| |||||||||||||||||||||||||||
Sbjct: 443 taaactctgtgtttcgcgagggtgcgacgccgagcat 407
>gb|CW098317.1|CW098317 104_464_11002941_148_34366_083 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11002941, DNA
sequence
Length = 422
Score = 484 bits (244), Expect = e-134
Identities = 322/348 (92%)
Strand = Plus / Plus
Query: 307 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 366
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 75 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 134
Query: 367 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 426
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 135 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 194
Query: 427 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 486
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 195 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 254
Query: 487 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 546
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 255 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 314
Query: 547 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 606
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 315 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 374
Query: 607 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgc 654
|||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 375 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgc 422
Score = 54.0 bits (27), Expect = 3e-005
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 227 gtttcgcgagggtgcgacgccgagcat 253
|||||||||||||||||||||||||||
Sbjct: 6 gtttcgcgagggtgcgacgccgagcat 32
>gb|CD221392.1|CD221392 CCC1_54_C04.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_54_C04_A007 3', mRNA sequence
Length = 622
Score = 484 bits (244), Expect = e-134
Identities = 328/356 (92%)
Strand = Plus / Minus
Query: 307 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 366
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 356 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 297
Query: 367 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 426
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 296 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 237
Query: 427 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 486
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 236 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 177
Query: 487 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 546
||||||||||||||||||||| |||||||||||||||||||||| |||| |||| |||
Sbjct: 176 taccagagcgccgtcttgaacgtgatcacggcgtcctgcgccaccttgttcgggttcgcg 117
Query: 547 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 606
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 116 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 57
Query: 607 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgct 662
|||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||
Sbjct: 56 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgct 1
Score = 58.0 bits (29), Expect = 2e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 217 taaactcttggtttcgcgagggtgcgacgccgagcat 253
|||||||| |||||||||||||||||||||||||||
Sbjct: 435 taaactctgtgtttcgcgagggtgcgacgccgagcat 399
>gb|CD224145.1|CD224145 CCC1_32_A09.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_32_A09_A007 3', mRNA sequence
Length = 622
Score = 484 bits (244), Expect = e-134
Identities = 322/348 (92%)
Strand = Plus / Minus
Query: 307 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 366
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 356 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 297
Query: 367 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 426
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 296 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 237
Query: 427 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 486
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 236 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 177
Query: 487 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 546
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 176 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 117
Query: 547 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 606
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 116 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 57
Query: 607 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgc 654
|||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 56 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgc 9
Score = 50.1 bits (25), Expect = 5e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 217 taaactcttggtttcgcgagggtgcgacgccgagcat 253
|||||||| ||||||||||||||||||||| |||||
Sbjct: 435 taaactctgtgtttcgcgagggtgcgacgcccagcat 399
>gb|CD226496.1|CD226496 CCC1_46_E08.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_46_E08_A007 3', mRNA sequence
Length = 617
Score = 484 bits (244), Expect = e-134
Identities = 328/356 (92%)
Strand = Plus / Minus
Query: 307 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 366
||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||
Sbjct: 356 gcctagcaagtgaggttgggcccggggtcgacgcccagctgccggcagtactgcttgtag 297
Query: 367 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 426
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 296 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 237
Query: 427 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 486
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 236 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 177
Query: 487 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 546
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 176 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 117
Query: 547 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 606
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 116 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 57
Query: 607 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgct 662
|||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||
Sbjct: 56 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgct 1
Score = 58.0 bits (29), Expect = 2e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 217 taaactcttggtttcgcgagggtgcgacgccgagcat 253
|||||||| |||||||||||||||||||||||||||
Sbjct: 435 taaactctgtgtttcgcgagggtgcgacgccgagcat 399
>gb|CD228140.1|CD228140 CCC1_6_E03.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_6_E03_A007 3', mRNA sequence
Length = 586
Score = 484 bits (244), Expect = e-134
Identities = 328/356 (92%)
Strand = Plus / Minus
Query: 307 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 366
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 356 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 297
Query: 367 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 426
||||| || ||||||||||||||||| | || || ||||||||||||||||||||||||
Sbjct: 296 tagcccacccgcgcgttcatctgggcagtattcttgccgttgcactcgagggcgccgttg 237
Query: 427 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 486
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 236 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 177
Query: 487 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 546
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 176 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 117
Query: 547 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 606
|||||||||||||| ||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 116 agcccgttgaagccaatggccttcccggcaggcccgtagttgtagttccacgagatttgc 57
Query: 607 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgct 662
|||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||
Sbjct: 56 agcgggccgcgcccgtagtacttctgtcccgcggcgcacggccactgcttgttgct 1
Score = 58.0 bits (29), Expect = 2e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 217 taaactcttggtttcgcgagggtgcgacgccgagcat 253
|||||||| |||||||||||||||||||||||||||
Sbjct: 435 taaactctgtgtttcgcgagggtgcgacgccgagcat 399
>gb|CD229477.1|CD229477 CCC1_16_C07.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_16_C07_A007 3', mRNA sequence
Length = 622
Score = 476 bits (240), Expect = e-132
Identities = 327/356 (91%)
Strand = Plus / Minus
Query: 307 gcctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtag 366
||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 356 gcctagcaagtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtag 297
Query: 367 tagccgacgcgcgcgttcatctgggcggggttgttcccgttgcactcgagggcgccgttg 426
||||| || ||||||||||||||||| | || || ||| ||||||||||||||||||||
Sbjct: 296 tagcccacccgcgcgttcatctgggcagtattcttgccgatgcactcgagggcgccgttg 237
Query: 427 atggccctgatggtggcgccgaagccctgcggcatcacacggtgcacgttgttcatccag 486
||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||
Sbjct: 236 atggccctgatggtggcgccgaacccctgcgacatcaccccgtgcacgttgttcgtccag 177
Query: 487 aaccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccctgttggggtcggcg 546
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct: 176 taccagagcgccgtcttgaacgcgatcacggcgtcctgcgccaccttgttcgggttcgcg 117
Query: 547 agcccgttgaagccgatgtccctcccggcgggcccgtagttgtagttccacgagatctgc 606
|||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||
Sbjct: 116 agcccgttgaagccgatggccttcccggcaggcccgtagttgtagttccacgagatttgc 57
Query: 607 agcgggccgcgcccgtagtacttctgccccgccgcgcacggccactgcctgttgct 662
|||||||||||||||||||||||||| ||||| |||||||| |||||| |||||||
Sbjct: 56 agcgggccgcgcccgtagtacttctgtcccgcggcgcacgggcactgcttgttgct 1
Score = 50.1 bits (25), Expect = 5e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 217 taaactcttggtttcgcgagggtgcgacgccgagcat 253
|||||||| ||||||||||||||||||||| |||||
Sbjct: 435 taaactctgtgtttcgcgagggtgcgacgcccagcat 399
>gb|CW088904.1|CW088904 104_434_10948392_114_32602_096 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10948392, DNA
sequence
Length = 617
Score = 460 bits (232), Expect = e-127
Identities = 289/308 (93%)
Strand = Plus / Minus
Query: 405 gttgcactcgagggcgccgttgatggccctgatggtggcgccgaagccctgcggcatcac 464
||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 617 gttgcactcgagggcgccgttgatggccctgatggtggcgccgaacccctgcgacatcac 558
Query: 465 acggtgcacgttgttcatccagaaccagagcgccgtcttgaacgcgatcacggcgtcctg 524
| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 557 cccgtgcacgttgttcgtccagtaccagagcgccgtcttgaacgcgatcacggcgtcctg 498
Query: 525 cgccaccctgttggggtcggcgagcccgttgaagccgatgtccctcccggcgggcccgta 584
||||||| |||| |||| ||||||||||||||||||||| || ||||||| ||||||||
Sbjct: 497 cgccaccttgttcgggttcgcgagcccgttgaagccgatggccttcccggcaggcccgta 438
Query: 585 gttgtagttccacgagatctgcagcgggccgcgcccgtagtacttctgccccgccgcgca 644
|||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 437 gttgtagttccacgagatttgcagcgggccgcgcccgtagtacttctgtcccgcggcgca 378
Query: 645 cggccactgcctgttgctcgcgtcgcagtaggcgttgctcttgttgatctcgctgatgta 704
|||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 377 cggccactgcttgttgctcgagtcgcagtaggcgttgttcttgttgatctcgctgatgta 318
Query: 705 gcagaaat 712
||||||||
Sbjct: 317 gcagaaat 310
Score = 139 bits (70), Expect = 7e-031
Identities = 82/86 (95%)
Strand = Plus / Minus
Query: 804 gttgacggcgctcaggaacgcgctccgggtgtagaagttcttgccctcgcacccgctccc 863
|||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||| |
Sbjct: 86 gttggcggcgctcaggaacgcactcctggtgtagaagttcttgccctcgcacccgctcgc 27
Query: 864 ggcctggttcttgatgccgttgaaga 889
||||||||||||||||||||||||||
Sbjct: 26 ggcctggttcttgatgccgttgaaga 1
Score = 73.8 bits (37), Expect = 3e-011
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 715 ccggtctcgtgcgtgacgtgcgcgaagaaggcggcgatctcgcgcttgccctccacc 771
||||||||||| ||||| || |||||||| ||||||||||||||||||||| |||||
Sbjct: 169 ccggtctcgtgggtgacatgggcgaagaaagcggcgatctcgcgcttgcccgccacc 113
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 350,450
Number of Sequences: 832831
Number of extensions: 350450
Number of successful extensions: 102263
Number of sequences better than 0.5: 307
Number of HSP's better than 0.5 without gapping: 307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100899
Number of HSP's gapped (non-prelim): 1278
length of query: 1225
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1205
effective length of database: 474,703,049
effective search space: 572017174045
effective search space used: 572017174045
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)