BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1738875.2.1
(761 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AF152550.1|AF152550 Sorghum bicolor chalcone synthase 3 ... 551 e-155
gb|BE357828.1|BE357828 DG1_22_G09.g1_A002 Dark Grown 1 (DG1... 535 e-150
gb|CX611549.1|CX611549 ANR1_25_G03.b1_A002 Anaerobic roots ... 535 e-150
gb|CX612377.1|CX612377 GABR1_2_D02.b1_A002 GA- or brassinol... 535 e-150
gb|CX612543.1|CX612543 GABR1_3_B09.b1_A002 GA- or brassinol... 535 e-150
gb|AF152552.1|AF152552 Sorghum bicolor chalcone synthase 5 ... 535 e-150
gb|BE357672.1|BE357672 DG1_21_G10.g1_A002 Dark Grown 1 (DG1... 525 e-147
gb|AF152549.1|AF152549 Sorghum bicolor chalcone synthase 2 ... 498 e-139
gb|BG241515.1|BG241515 RHIZ2_50_C08.g1_A003 Rhizome2 (RHIZ2... 496 e-138
gb|CX615996.1|CX615996 GABR1_25_E11.b1_A002 GA- or brassino... 494 e-138
gb|BG465925.1|BG465925 RHIZ2_46_C10.g1_A003 Rhizome2 (RHIZ2... 492 e-137
gb|CD462947.1|CD462947 ETH1_41_C09.b1_A002 Ethylene-treated... 482 e-134
gb|AF152553.1|AF152553 Sorghum bicolor chalcone synthase 6 ... 482 e-134
gb|BE358855.1|BE358855 DG1_32_D08.g1_A002 Dark Grown 1 (DG1... 480 e-133
gb|CD431331.1|CD431331 ETH1_8_D10.b1_A002 Ethylene-treated ... 474 e-132
gb|CN124863.1|CN124863 RHOH1_7_H06.b1_A002 Acid- and alkali... 474 e-132
gb|CN135039.1|CN135039 OX1_30_D10.b1_A002 Oxidatively-stres... 474 e-132
gb|CN138700.1|CN138700 OX1_13_H11.b1_A002 Oxidatively-stres... 474 e-132
gb|CX615434.1|CX615434 GABR1_20_D03.b1_A002 GA- or brassino... 474 e-132
gb|CX622327.1|CX622327 GABR1_63_G08.b2_A002 GA- or brassino... 468 e-130
gb|AF152551.1|AF152551 Sorghum bicolor chalcone synthase 4 ... 466 e-129
gb|CD428198.1|CD428198 ETH1_28_C04.b1_A002 Ethylene-treated... 462 e-128
gb|CF432833.1|CF432833 NIT1_19_F03.b1_A002 Nitrogen-deficie... 462 e-128
gb|CF433944.1|CF433944 NIT1_31_C08.b1_A002 Nitrogen-deficie... 462 e-128
gb|CX608033.1|CX608033 ANR1_32_F01.b1_A002 Anaerobic roots ... 460 e-128
gb|CF430205.1|CF430205 PH1_26_C05.g1_A002 Phosphorous-defic... 446 e-123
gb|CN138481.1|CN138481 OX1_64_C03.b1_A002 Oxidatively-stres... 446 e-123
gb|AF152548.1|AF152548 Sorghum bicolor chalcone synthase 1 ... 444 e-123
gb|CN125053.1|CN125053 RHOH1_8_C09.g1_A002 Acid- and alkali... 442 e-122
gb|AF152554.1|AF152554 Sorghum bicolor chalcone synthase 7 ... 438 e-121
gb|BG605853.1|BG605853 RHIZ2_82_C10.g1_A003 Rhizome2 (RHIZ2... 434 e-120
gb|CD463544.1|CD463544 ETH1_45_A06.b1_A002 Ethylene-treated... 434 e-120
gb|CX615465.1|CX615465 GABR1_20_G03.b1_A002 GA- or brassino... 434 e-120
gb|BF177058.1|BF177058 EM1_3_B02.g1_A002 Embryo 1 (EM1) Sor... 430 e-119
gb|CD430325.1|CD430325 ETH1_18_G09.b1_A002 Ethylene-treated... 430 e-119
gb|CN134537.1|CN134537 OX1_27_A10.b1_A002 Oxidatively-stres... 430 e-119
gb|AW283504.1|AW283504 LG1_265_C05.g1_A002 Light Grown 1 (L... 420 e-116
gb|AW283518.1|AW283518 LG1_265_A05.g1_A002 Light Grown 1 (L... 420 e-116
gb|CD430484.1|CD430484 ETH1_19_D10.b1_A002 Ethylene-treated... 416 e-114
gb|CN137453.1|CN137453 OX1_57_H07.b1_A002 Oxidatively-stres... 406 e-111
gb|CN149370.1|CN149370 WOUND1_62_H04.b1_A002 Wounded leaves... 404 e-111
gb|BE356024.1|BE356024 DG1_121_B02.g1_A002 Dark Grown 1 (DG... 396 e-108
gb|CD233146.1|CD233146 SS1_12_D09.b1_A012 Salt-stressed see... 394 e-108
gb|BE362244.1|BE362244 DG1_85_H08.b1_A002 Dark Grown 1 (DG1... 387 e-105
gb|CN150411.1|CN150411 WOUND1_69_A12.b1_A002 Wounded leaves... 387 e-105
gb|BE362275.1|BE362275 DG1_85_H08.g1_A002 Dark Grown 1 (DG1... 385 e-105
gb|CD430674.1|CD430674 ETH1_20_C06.b1_A002 Ethylene-treated... 385 e-105
gb|CF428995.1|CF428995 PH1_19_C12.b1_A002 Phosphorous-defic... 383 e-104
gb|CX609856.1|CX609856 ANR1_15_D09.b1_A002 Anaerobic roots ... 381 e-104
gb|CX623185.1|CX623185 GABR1_68_E08.b1_A002 GA- or brassino... 373 e-101
gb|CD462509.1|CD462509 ETH1_38_B05.b1_A002 Ethylene-treated... 369 e-100
gb|CF431308.1|CF431308 NIT1_5_E11.b1_A002 Nitrogen-deficien... 365 4e-099
gb|CX606271.1|CX606271 ANR1_2_C12.b1_A002 Anaerobic roots S... 361 6e-098
gb|AW565912.1|AW565912 LG1_353_E05.g1_A002 Light Grown 1 (L... 359 2e-097
gb|CX606791.1|CX606791 ANR1_5_B02.b1_A002 Anaerobic roots S... 351 6e-095
gb|CX611210.1|CX611210 ANR1_23_F10.b1_A002 Anaerobic roots ... 351 6e-095
gb|CX618220.1|CX618220 GABR1_38_H01.b1_A002 GA- or brassino... 335 4e-090
gb|AW565339.1|AW565339 LG1_342_D02.g1_A002 Light Grown 1 (L... 331 6e-089
gb|BG559905.1|BG559905 RHIZ2_75_B04.g1_A003 Rhizome2 (RHIZ2... 327 9e-088
gb|CN133901.1|CN133901 OX1_19_B11.b1_A002 Oxidatively-stres... 309 2e-082
gb|U51569.1|SBU51569 Sorghum bicolor chalcone synthase (CHS... 309 2e-082
gb|CF432638.1|CF432638 NIT1_18_E06.b1_A002 Nitrogen-deficie... 307 8e-082
gb|CX621311.1|CX621311 GABR1_57_H07.b1_A002 GA- or brassino... 307 8e-082
gb|BE359724.1|BE359724 DG1_56_G02.g2_A002 Dark Grown 1 (DG1... 297 8e-079
gb|AW284288.2|AW284288 LG1_269_B01.g1_A002 Light Grown 1 (L... 293 1e-077
gb|CD431531.1|CD431531 ETH1_9_E07.b1_A002 Ethylene-treated ... 293 1e-077
gb|CN137838.1|CN137838 OX1_60_B02.b1_A002 Oxidatively-stres... 293 1e-077
gb|BE361236.1|BE361236 DG1_70_C01.g1_A002 Dark Grown 1 (DG1... 285 3e-075
gb|CX612383.1|CX612383 GABR1_2_D08.b1_A002 GA- or brassinol... 270 2e-070
gb|CF428002.1|CF428002 PH1_12_E10.b1_A002 Phosphorous-defic... 254 1e-065
gb|BE361141.1|BE361141 DG1_70_C01.b1_A002 Dark Grown 1 (DG1... 250 2e-064
gb|CF431883.1|CF431883 NIT1_11_E04.b1_A002 Nitrogen-deficie... 228 6e-058
gb|CW378899.1|CW378899 fsbb001f057o03k0 Sorghum methylation... 210 1e-052
gb|CW419724.1|CW419724 fsbb001f124l09f0 Sorghum methylation... 210 1e-052
gb|BE597283.1|BE597283 PI1_70_D03.g1_A002 Pathogen induced ... 210 1e-052
gb|BE597962.1|BE597962 PI1_67_F08.g1_A002 Pathogen induced ... 210 1e-052
gb|BE601240.1|BE601240 PI1_90_F05.g1_A002 Pathogen induced ... 210 1e-052
gb|BM317945.1|BM317945 PI1_13_D11.g9_A002 Pathogen induced ... 210 1e-052
gb|AY069951.1| Sorghum bicolor chalcone synthase 8 mRNA, co... 210 1e-052
gb|BE355743.1|BE355743 DG1_116_C08.g1_A002 Dark Grown 1 (DG... 206 2e-051
gb|BE597782.1|BE597782 PI1_65_C02.g1_A002 Pathogen induced ... 206 2e-051
gb|BE362290.1|BE362290 DG1_85_F07.g1_A002 Dark Grown 1 (DG1... 200 1e-049
gb|CD431579.1|CD431579 ETH1_9_E07.g1_A002 Ethylene-treated ... 170 1e-040
gb|CX616163.1|CX616163 GABR1_26_F05.b1_A002 GA- or brassino... 168 5e-040
gb|AW283840.2|AW283840 LG1_260_D05.g1_A002 Light Grown 1 (L... 163 3e-038
gb|CN141529.1|CN141529 OX1_52_E12.b1_A002 Oxidatively-stres... 135 7e-030
gb|CW070887.1|CW070887 104_323_10591294_116_30485 Sorghum m... 131 1e-028
gb|BE598061.1|BE598061 PI1_65_C02.b1_A002 Pathogen induced ... 115 6e-024
gb|BE366441.1|BE366441 PI1_33_A03.g1_A002 Pathogen induced ... 113 2e-023
gb|BM327322.1|BM327322 PIC1_12_A10.g1_A002 Pathogen-infecte... 111 1e-022
gb|CD430716.1|CD430716 ETH1_20_C06.g1_A002 Ethylene-treated... 111 1e-022
gb|CX616315.1|CX616315 GABR1_27_E07.b1_A002 GA- or brassino... 101 9e-020
gb|CD213169.1|CD213169 HS1_29_F02.b1_A012 Heat-shocked seed... 96 6e-018
gb|CF431104.1|CF431104 NIT1_6_D10.b1_A002 Nitrogen-deficien... 90 4e-016
gb|BE355662.1|BE355662 DG1_116_C08.b1_A002 Dark Grown 1 (DG... 80 3e-013
gb|BI075646.1|BI075646 IP1_23_C09.g1_A002 Immature pannicle... 70 3e-010
gb|CN141822.1|CN141822 WOUND1_2_C07.b1_A002 Wounded leaves ... 70 3e-010
gb|CX619715.1|CX619715 GABR1_47_G05.b1_A002 GA- or brassino... 70 3e-010
gb|BE363966.1|BE363966 PI1_10_H06.g1_A002 Pathogen induced ... 68 1e-009
gb|CN135967.1|CN135967 OX1_40_B06.b1_A002 Oxidatively-stres... 64 2e-008
gb|CF431127.1|CF431127 NIT1_6_H12.b1_A002 Nitrogen-deficien... 62 8e-008
gb|CX617869.1|CX617869 GABR1_36_G03.b1_A002 GA- or brassino... 62 8e-008
gb|CD232848.1|CD232848 SS1_10_F02.b1_A012 Salt-stressed see... 54 2e-005
gb|CD206076.1|CD206076 HS1_20_D02.b1_A012 Heat-shocked seed... 46 0.005
gb|AW672448.1|AW672448 LG1_359_D12.g1_A002 Light Grown 1 (L... 42 0.073
gb|BG411388.1|BG411388 EM1_57_E10.g1_A002 Embryo 1 (EM1) So... 42 0.073
gb|CL147747.1|CL147747 104_327_10592607_116_31781_115 Sorgh... 40 0.29
gb|CW020718.1|CW020718 104_109_10409129_116_30501 Sorghum m... 40 0.29
gb|CW090472.1|CW090472 104_436_10949299_114_32604_074 Sorgh... 40 0.29
gb|CW091748.1|CW091748 104_453_10998746_114_33031_001 Sorgh... 40 0.29
gb|CW101011.1|CW101011 104_468_11004410_116_34399_005 Sorgh... 40 0.29
gb|CW101014.1|CW101014 104_468_11004412_116_34399_006 Sorgh... 40 0.29
gb|CW150808.1|CW150808 104_551_11143609_116_36311_009 Sorgh... 40 0.29
gb|CW150809.1|CW150809 104_551_11143609_148_36312_009 Sorgh... 40 0.29
gb|CW166835.1|CW166835 104_575_11153277_148_36767_083 Sorgh... 40 0.29
gb|CW175312.1|CW175312 104_587_11157871_148_36839_020 Sorgh... 40 0.29
gb|BE355032.1|BE355032 DG1_10_A04.g1_A002 Dark Grown 1 (DG1... 40 0.29
gb|BG323036.1|BG323036 EM1_14_B07.g1_A002 Embryo 1 (EM1) So... 40 0.29
gb|CF758924.1|CF758924 DSAF1_38_B11.g1_A011 Drought-stresse... 40 0.29
gb|CF760404.1|CF760404 DSAF1_60_C03.b1_A011 Drought-stresse... 40 0.29
gb|CF761031.1|CF761031 DSAF1_70_B06.b1_A011 Drought-stresse... 40 0.29
gb|CF761140.1|CF761140 DSAF1_71_F08.b1_A011 Drought-stresse... 40 0.29
gb|CW069021.1|CW069021 104_318_10525528_1_30095 Sorghum met... 38 1.1
gb|CW163319.1|CW163319 104_570_11151400_116_36452_050 Sorgh... 38 1.1
gb|CW264393.1|CW264393 104_733_11231267_148_35251_046 Sorgh... 38 1.1
gb|CW271065.1|CW271065 104_743_11402792_116_35339_030 Sorgh... 38 1.1
gb|CW316610.1|CW316610 104_808_11472981_148_35855_093 Sorgh... 38 1.1
gb|CW472862.1|CW472862 fsbb001f227p23k0 Sorghum methylation... 38 1.1
gb|BZ335455.1|BZ335455 hx97g10.b1 WGS-SbicolorF (JM107 adap... 36 4.5
gb|CL174600.1|CL174600 104_379_10891755_116_31769_123 Sorgh... 36 4.5
gb|CW048752.1|CW048752 104_287_10513609_114_30211 Sorghum m... 36 4.5
gb|CW094174.1|CW094174 104_457_11000170_116_37476_037 Sorgh... 36 4.5
gb|CW147494.1|CW147494 104_540_11139538_148_34995_035 Sorgh... 36 4.5
gb|CW157184.1|CW157184 104_560_11147092_116_36382_008 Sorgh... 36 4.5
gb|CW157185.1|CW157185 104_560_11147092_148_36381_008 Sorgh... 36 4.5
gb|CW162656.1|CW162656 104_570_11151053_148_36450_031 Sorgh... 36 4.5
gb|CW166722.1|CW166722 104_575_11153210_116_36765_005 Sorgh... 36 4.5
gb|CW215033.1|CW215033 104_647_11194330_148_37163_043 Sorgh... 36 4.5
gb|CW229863.1|CW229863 104_671_11207542_116_37268_089 Sorgh... 36 4.5
gb|CW231466.1|CW231466 104_680_11211136_116_37342_052 Sorgh... 36 4.5
gb|CW250462.1|CW250462 104_712_11223403_148_35056_070 Sorgh... 36 4.5
gb|CW266772.1|CW266772 104_736_11232612_116_35284_038 Sorgh... 36 4.5
gb|CW286823.1|CW286823 104_764_11411093_148_35517_019 Sorgh... 36 4.5
gb|CW319123.1|CW319123 104_811_11474317_116_35878_053 Sorgh... 36 4.5
gb|CW323726.1|CW323726 104_818_11476783_148_35908_032 Sorgh... 36 4.5
gb|CW354252.1|CW354252 fsbb001f017g04f0 Sorghum methylation... 36 4.5
gb|CW374356.1|CW374356 fsbb001f051d01f0 Sorghum methylation... 36 4.5
gb|CW379371.1|CW379371 fsbb001f058j20f0 Sorghum methylation... 36 4.5
gb|CW385663.1|CW385663 fsbb001f069d16k0 Sorghum methylation... 36 4.5
gb|CW391986.1|CW391986 fsbb001f078g08f0 Sorghum methylation... 36 4.5
gb|CW402276.1|CW402276 fsbb001f093h19f0 Sorghum methylation... 36 4.5
gb|CW466027.1|CW466027 fsbb001f217b08k0 Sorghum methylation... 36 4.5
gb|CW471249.1|CW471249 fsbb001f225a16f0 Sorghum methylation... 36 4.5
gb|CW475788.1|CW475788 fsbb001f232f08k0 Sorghum methylation... 36 4.5
gb|CW486373.1|CW486373 fsbb001f249j09k0 Sorghum methylation... 36 4.5
gb|CW489991.1|CW489991 fsbb001f275d13k0 Sorghum methylation... 36 4.5
gb|AW671621.1|AW671621 LG1_349_C03.b1_A002 Light Grown 1 (L... 36 4.5
gb|BE918190.1|BE918190 OV1_3_A05.b1_A002 Ovary 1 (OV1) Sorg... 36 4.5
gb|BF176964.1|BF176964 EM1_4_H06.b1_A002 Embryo 1 (EM1) Sor... 36 4.5
gb|BF177217.1|BF177217 EM1_1_F02.b1_A002 Embryo 1 (EM1) Sor... 36 4.5
gb|BG157885.1|BG157885 EM1_6_B02.b1_A002 Embryo 1 (EM1) Sor... 36 4.5
gb|BG322438.1|BG322438 EM1_24_H12.b1_A002 Embryo 1 (EM1) So... 36 4.5
gb|BG356635.1|BG356635 EM1_24_H12.g1_A002 Embryo 1 (EM1) So... 36 4.5
gb|BG556047.1|BG556047 EM1_66_A04.b1_A002 Embryo 1 (EM1) So... 36 4.5
gb|BG556048.1|BG556048 EM1_66_A05.b1_A002 Embryo 1 (EM1) So... 36 4.5
gb|BG556134.1|BG556134 EM1_68_B09.b1_A002 Embryo 1 (EM1) So... 36 4.5
gb|BG649343.1|BG649343 EM1_78_C07.b1_A002 Embryo 1 (EM1) So... 36 4.5
gb|CF430757.1|CF430757 NIT1_2_F01.b1_A002 Nitrogen-deficien... 36 4.5
gb|CF430763.1|CF430763 NIT1_2_D01.b1_A002 Nitrogen-deficien... 36 4.5
gb|CF482834.1|CF482834 POL1_9_A11.g1_A002 Pollen Sorghum bi... 36 4.5
gb|CN133523.1|CN133523 OX1_12_F06.g1_A002 Oxidatively-stres... 36 4.5
gb|CN137816.1|CN137816 OX1_59_G08.g1_A002 Oxidatively-stres... 36 4.5
gb|CN144986.1|CN144986 WOUND1_26_D02.b2_A002 Wounded leaves... 36 4.5
>gb|AF152550.1|AF152550 Sorghum bicolor chalcone synthase 3 (CHS3) gene, complete cds
Length = 2137
Score = 551 bits (278), Expect = e-155
Identities = 404/446 (90%)
Strand = Plus / Plus
Query: 1 cctgcccgactcggagggcgccatcgacggccacctccgcgaggtggggctcaccttcca 60
|||||| ||||| |||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 1457 cctgccggactccgagggcgccatcgacggccacctccgcgaggtcgggctcacgttcca 1516
Query: 61 cctgctcaaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgc 120
||||||||||||||||||||||||||||||||||||||| | ||| ||||||| || ||
Sbjct: 1517 cctgctcaaggacgtgcccgggctcatctccaagaacatagagcgctcgctggaggaggc 1576
Query: 121 gttcaagccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcgg 180
|||||||||||| || ||| |||||| |||||||||||||||||||||||||| |||||
Sbjct: 1577 gttcaagccgctggggatcaccgactacaactccatcttctgggtggcgcaccctggcgg 1636
Query: 181 gcccgccatcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgc 240
||| || || || ||||||||||||||||||||||||||||| |||| || |||| ||
Sbjct: 1637 gccagcgattctggaccaggtggaggccaaggtcgggctggagaaggagcggctgcgtgc 1696
Query: 241 cacccgccacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcct 300
||| ||||| ||||| || ||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 1697 cacgcgccatgtcctatctgagtacggcaacatgtccagcgcgtgcgtgctcttcatcct 1756
Query: 301 cgacgagatgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcga 360
||||||||||||||||||||||||||| ||||| ||||||||||| || || ||| ||||
Sbjct: 1757 cgacgagatgcgcaagcgctccgccgaagacggccaggccaccaccggtgaaggcttcga 1816
Query: 361 ctggggcgtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacag 420
||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 1817 ctggggcgtgctcttcggcttcggccccgggctcaccgtcgagaccgtcgtgctccacag 1876
Query: 421 cgtccccatcaccaccggagcggcca 446
||| ||||||||||||||||||||||
Sbjct: 1877 cgttcccatcaccaccggagcggcca 1902
>gb|BE357828.1|BE357828 DG1_22_G09.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 677
Score = 535 bits (270), Expect = e-150
Identities = 402/446 (90%)
Strand = Plus / Plus
Query: 1 cctgcccgactcggagggcgccatcgacggccacctccgcgaggtggggctcaccttcca 60
|||||| ||||| |||||||||||||||||||||||||| ||||| |||||||| |||||
Sbjct: 55 cctgccggactccgagggcgccatcgacggccacctccgtgaggtcgggctcacgttcca 114
Query: 61 cctgctcaaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgc 120
||||||||||||||||||||||||||||||||| ||||| | ||| ||||||| || ||
Sbjct: 115 cctgctcaaggacgtgcccgggctcatctccaaaaacatagagcgctcgctggaggaggc 174
Query: 121 gttcaagccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcgg 180
|||||||||||| || ||| |||||| |||||||||||||||||||||||||| |||||
Sbjct: 175 gttcaagccgctggggatcaccgactacaactccatcttctgggtggcgcaccctggcgg 234
Query: 181 gcccgccatcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgc 240
||| || ||||| |||||||||||||||||||||||||| || |||| ||||||| ||
Sbjct: 235 gccagcaatcctggaccaggtggaggccaaggtcgggctagagaaggagcggatgcgtgc 294
Query: 241 cacccgccacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcct 300
||| ||||| ||||| |||||||||||||||||||| || || ||||| |||||||||||
Sbjct: 295 cacgcgccatgtcctgtccgagtacggcaacatgtctagtgcgtgcgtgctcttcatcct 354
Query: 301 cgacgagatgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcga 360
||||||||||||||| ||||||||||||||||| ||||| ||||| ||||| ||| ||||
Sbjct: 355 cgacgagatgcgcaaacgctccgccgaggacggccaggcaaccaccggcgaaggcttcga 414
Query: 361 ctggggcgtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacag 420
||||||||| |||||||||||||| || || |||||||||||||||||||||||||||||
Sbjct: 415 ctggggcgtgctcttcggcttcggtcctgggctcaccgtcgagaccgtcgtgctccacag 474
Query: 421 cgtccccatcaccaccggagcggcca 446
||||||||||||||||||||||||||
Sbjct: 475 cgtccccatcaccaccggagcggcca 500
>gb|CX611549.1|CX611549 ANR1_25_G03.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_25_G03_A002 3', mRNA sequence
Length = 747
Score = 535 bits (270), Expect = e-150
Identities = 402/446 (90%)
Strand = Plus / Plus
Query: 1 cctgcccgactcggagggcgccatcgacggccacctccgcgaggtggggctcaccttcca 60
|||||| ||||| |||||||||||||||||||||||||| ||||| |||||||| |||||
Sbjct: 11 cctgccggactccgagggcgccatcgacggccacctccgtgaggtcgggctcacgttcca 70
Query: 61 cctgctcaaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgc 120
||||||||||||||||||||||||||||||||| ||||| | ||| ||||||| || ||
Sbjct: 71 cctgctcaaggacgtgcccgggctcatctccaaaaacatagagcgctcgctggaggaggc 130
Query: 121 gttcaagccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcgg 180
|||||||||||| || ||| |||||| |||||||||||||||||||||||||| |||||
Sbjct: 131 gttcaagccgctggggatcaccgactacaactccatcttctgggtggcgcaccctggcgg 190
Query: 181 gcccgccatcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgc 240
||| || ||||| |||||||||||||||||||||||||| || |||| ||||||| ||
Sbjct: 191 gccagcaatcctggaccaggtggaggccaaggtcgggctagagaaggagcggatgcgtgc 250
Query: 241 cacccgccacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcct 300
||| ||||| ||||| |||||||||||||||||||| || || ||||| |||||||||||
Sbjct: 251 cacgcgccatgtcctgtccgagtacggcaacatgtctagtgcgtgcgtgctcttcatcct 310
Query: 301 cgacgagatgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcga 360
||||||||||||||| ||||||||||||||||| ||||| ||||| ||||| ||| ||||
Sbjct: 311 cgacgagatgcgcaaacgctccgccgaggacggccaggcaaccaccggcgaaggcttcga 370
Query: 361 ctggggcgtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacag 420
||||||||| |||||||||||||| || || |||||||||||||||||||||||||||||
Sbjct: 371 ctggggcgtgctcttcggcttcggtcctgggctcaccgtcgagaccgtcgtgctccacag 430
Query: 421 cgtccccatcaccaccggagcggcca 446
||||||||||||||||||||||||||
Sbjct: 431 cgtccccatcaccaccggagcggcca 456
>gb|CX612377.1|CX612377 GABR1_2_D02.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_2_D02_A002 3', mRNA sequence
Length = 778
Score = 535 bits (270), Expect = e-150
Identities = 402/446 (90%)
Strand = Plus / Plus
Query: 1 cctgcccgactcggagggcgccatcgacggccacctccgcgaggtggggctcaccttcca 60
|||||| ||||| |||||||||||||||||||||||||| ||||| |||||||| |||||
Sbjct: 57 cctgccggactccgagggcgccatcgacggccacctccgtgaggtcgggctcacgttcca 116
Query: 61 cctgctcaaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgc 120
||||||||||||||||||||||||||||||||| ||||| | ||| ||||||| || ||
Sbjct: 117 cctgctcaaggacgtgcccgggctcatctccaaaaacatagagcgctcgctggaggaggc 176
Query: 121 gttcaagccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcgg 180
|||||||||||| || ||| |||||| |||||||||||||||||||||||||| |||||
Sbjct: 177 gttcaagccgctggggatcaccgactacaactccatcttctgggtggcgcaccctggcgg 236
Query: 181 gcccgccatcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgc 240
||| || ||||| |||||||||||||||||||||||||| || |||| ||||||| ||
Sbjct: 237 gccagcaatcctggaccaggtggaggccaaggtcgggctagagaaggagcggatgcgtgc 296
Query: 241 cacccgccacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcct 300
||| ||||| ||||| |||||||||||||||||||| || || ||||| |||||||||||
Sbjct: 297 cacgcgccatgtcctgtccgagtacggcaacatgtctagtgcgtgcgtgctcttcatcct 356
Query: 301 cgacgagatgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcga 360
||||||||||||||| ||||||||||||||||| ||||| ||||| ||||| ||| ||||
Sbjct: 357 cgacgagatgcgcaaacgctccgccgaggacggccaggcaaccaccggcgaaggcttcga 416
Query: 361 ctggggcgtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacag 420
||||||||| |||||||||||||| || || |||||||||||||||||||||||||||||
Sbjct: 417 ctggggcgtgctcttcggcttcggtcctgggctcaccgtcgagaccgtcgtgctccacag 476
Query: 421 cgtccccatcaccaccggagcggcca 446
||||||||||||||||||||||||||
Sbjct: 477 cgtccccatcaccaccggagcggcca 502
>gb|CX612543.1|CX612543 GABR1_3_B09.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_3_B09_A002 3', mRNA sequence
Length = 717
Score = 535 bits (270), Expect = e-150
Identities = 402/446 (90%)
Strand = Plus / Plus
Query: 1 cctgcccgactcggagggcgccatcgacggccacctccgcgaggtggggctcaccttcca 60
|||||| ||||| |||||||||||||||||||||||||| ||||| |||||||| |||||
Sbjct: 7 cctgccggactccgagggcgccatcgacggccacctccgtgaggtcgggctcacgttcca 66
Query: 61 cctgctcaaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgc 120
||||||||||||||||||||||||||||||||| ||||| | ||| ||||||| || ||
Sbjct: 67 cctgctcaaggacgtgcccgggctcatctccaaaaacatagagcgctcgctggaggaggc 126
Query: 121 gttcaagccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcgg 180
|||||||||||| || ||| |||||| |||||||||||||||||||||||||| |||||
Sbjct: 127 gttcaagccgctggggatcaccgactacaactccatcttctgggtggcgcaccctggcgg 186
Query: 181 gcccgccatcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgc 240
||| || ||||| |||||||||||||||||||||||||| || |||| ||||||| ||
Sbjct: 187 gccagcaatcctggaccaggtggaggccaaggtcgggctagagaaggagcggatgcgtgc 246
Query: 241 cacccgccacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcct 300
||| ||||| ||||| |||||||||||||||||||| || || ||||| |||||||||||
Sbjct: 247 cacgcgccatgtcctgtccgagtacggcaacatgtctagtgcgtgcgtgctcttcatcct 306
Query: 301 cgacgagatgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcga 360
||||||||||||||| ||||||||||||||||| ||||| ||||| ||||| ||| ||||
Sbjct: 307 cgacgagatgcgcaaacgctccgccgaggacggccaggcaaccaccggcgaaggcttcga 366
Query: 361 ctggggcgtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacag 420
||||||||| |||||||||||||| || || |||||||||||||||||||||||||||||
Sbjct: 367 ctggggcgtgctcttcggcttcggtcctgggctcaccgtcgagaccgtcgtgctccacag 426
Query: 421 cgtccccatcaccaccggagcggcca 446
||||||||||||||||||||||||||
Sbjct: 427 cgtccccatcaccaccggagcggcca 452
>gb|AF152552.1|AF152552 Sorghum bicolor chalcone synthase 5 (CHS5) gene, complete cds
Length = 3960
Score = 535 bits (270), Expect = e-150
Identities = 402/446 (90%)
Strand = Plus / Plus
Query: 1 cctgcccgactcggagggcgccatcgacggccacctccgcgaggtggggctcaccttcca 60
|||||| ||||| |||||||||||||||||||||||||| ||||| |||||||| |||||
Sbjct: 3177 cctgccggactccgagggcgccatcgacggccacctccgtgaggtcgggctcacgttcca 3236
Query: 61 cctgctcaaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgc 120
||||||||||||||||||||||||||||||||| ||||| | ||| ||||||| || ||
Sbjct: 3237 cctgctcaaggacgtgcccgggctcatctccaaaaacatagagcgctcgctggaggaggc 3296
Query: 121 gttcaagccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcgg 180
|||||||||||| || ||| |||||| |||||||||||||||||||||||||| |||||
Sbjct: 3297 gttcaagccgctggggatcaccgactacaactccatcttctgggtggcgcaccctggcgg 3356
Query: 181 gcccgccatcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgc 240
||| || ||||| |||||||||||||||||||||||||| || |||| ||||||| ||
Sbjct: 3357 gccagcaatcctggaccaggtggaggccaaggtcgggctagagaaggagcggatgcgtgc 3416
Query: 241 cacccgccacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcct 300
||| ||||| ||||| |||||||||||||||||||| || || ||||| |||||||||||
Sbjct: 3417 cacgcgccatgtcctgtccgagtacggcaacatgtctagtgcgtgcgtgctcttcatcct 3476
Query: 301 cgacgagatgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcga 360
||||||||||||||| ||||||||||||||||| ||||| ||||| ||||| ||| ||||
Sbjct: 3477 cgacgagatgcgcaaacgctccgccgaggacggccaggcaaccaccggcgaaggcttcga 3536
Query: 361 ctggggcgtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacag 420
||||||||| |||||||||||||| || || |||||||||||||||||||||||||||||
Sbjct: 3537 ctggggcgtgctcttcggcttcggtcctgggctcaccgtcgagaccgtcgtgctccacag 3596
Query: 421 cgtccccatcaccaccggagcggcca 446
||||||||||||||||||||||||||
Sbjct: 3597 cgtccccatcaccaccggagcggcca 3622
>gb|BE357672.1|BE357672 DG1_21_G10.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 613
Score = 525 bits (265), Expect = e-147
Identities = 391/433 (90%)
Strand = Plus / Plus
Query: 14 gagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctcaaggac 73
|||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||
Sbjct: 4 gagggcgccatcgacggccacctccgtgaggtcgggctcacgttccacctgctcaaggac 63
Query: 74 gtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctc 133
|||||||||||||||||||| ||||| | ||| ||||||| || ||||||||||||||
Sbjct: 64 gtgcccgggctcatctccaaaaacatagagcgctcgctggaggaggcgttcaagccgctg 123
Query: 134 ggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctc 193
|| ||| |||||| |||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 124 gggatcaccgactacaactccatcttctgggtggcgcaccctggcgggccagcaatcctg 183
Query: 194 gaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtc 253
|||||||||||||||||||||||||| || |||| ||||||| ||||| ||||| |||
Sbjct: 184 gaccaggtggaggccaaggtcgggctagagaaggagcggatgcgtgccacgcgccatgtc 243
Query: 254 ctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgc 313
|| |||||||||||||||||||| || || ||||| ||||||||||||||||||||||||
Sbjct: 244 ctgtccgagtacggcaacatgtctagtgcgtgcgtgctcttcatcctcgacgagatgcgc 303
Query: 314 aagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctc 373
|| ||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| |||
Sbjct: 304 aaacgctccgccgaggacggccaggcaaccaccggcgaaggcttcgactggggcgtgctc 363
Query: 374 ttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcacc 433
||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ttcggcttcggtcctgggctcaccgtcgagaccgtcgtgctccacagcgtccccatcacc 423
Query: 434 accggagcggcca 446
|||||||||||||
Sbjct: 424 accggagcggcca 436
>gb|AF152549.1|AF152549 Sorghum bicolor chalcone synthase 2 (CHS2) gene, complete cds
Length = 2100
Score = 498 bits (251), Expect = e-139
Identities = 392/439 (89%)
Strand = Plus / Plus
Query: 8 gactcggagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctc 67
||||| |||||||||||||||||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 1502 gactccgagggcgccatcgacggccacctccgcgaggtcgggctcacgttccatctgctc 1561
Query: 68 aaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaag 127
|||||||||||||||||||||||||||||||| | ||| | ||||| || || ||||||
Sbjct: 1562 aaggacgtgcccgggctcatctccaagaacatagagcgctcactggaggaggcattcaag 1621
Query: 128 ccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgcc 187
||||| || ||| |||||| ||||| ||||||||||||||||||||||| ||||| ||
Sbjct: 1622 ccgctggggatcaccgactacaactctatcttctgggtggcgcaccccggtgggccggcg 1681
Query: 188 atcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgc 247
||||| ||||||||||||||||||||||||||||| |||| | |||||||| || ||
Sbjct: 1682 atcctggaccaggtggaggccaaggtcgggctggagaaggagcgaatgcgcgctacgcga 1741
Query: 248 cacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgag 307
|| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1742 catgttctctctgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgag 1801
Query: 308 atgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggc 367
||||| ||||||||||||||||| || | ||||||||| ||||| ||| |||| ||||||
Sbjct: 1802 atgcgtaagcgctccgccgaggatggccgggccaccaccggcgaaggcttcgagtggggc 1861
Query: 368 gtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtcccc 427
|||||||| ||||| ||||| || ||||||||||||||||||||||||||||| || |||
Sbjct: 1862 gtcctctttggctttggccccgggctcaccgtcgagaccgtcgtgctccacagtgttccc 1921
Query: 428 atcaccaccggagcggcca 446
|||||||||||||||||||
Sbjct: 1922 atcaccaccggagcggcca 1940
>gb|BG241515.1|BG241515 RHIZ2_50_C08.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 511
Score = 496 bits (250), Expect = e-138
Identities = 367/406 (90%)
Strand = Plus / Plus
Query: 41 gaggtggggctcaccttccacctgctcaaggacgtgcccgggctcatctccaagaacatc 100
||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaggtcgggctcacgttccacctgctcaaggacgtgcccgggctcatctccaagaacata 60
Query: 101 ggccgcgcgctggacgacgcgttcaagccgctcggcatctccgactggaactccatcttc 160
| ||| ||||||| || |||||||||||||| || ||| |||||| ||||||||||||
Sbjct: 61 gagcgctcgctggaggaggcgttcaagccgctggggatcaccgactacaactccatcttc 120
Query: 161 tgggtggcgcaccccggcgggcccgccatcctcgaccaggtggaggccaaggtcgggctg 220
|||||||||||||| |||||||| || || || |||||||||||||||||||||||||||
Sbjct: 121 tgggtggcgcaccctggcgggccagcgattctggaccaggtggaggccaaggtcgggctg 180
Query: 221 gacaaggccaggatgcgcgccacccgccacgtcctctccgagtacggcaacatgtccagc 280
|| |||| ||||||| ||||| ||||| ||||| || |||||||||||||||||||||
Sbjct: 181 gagaaggagcggatgcgtgccacgcgccatgtcctatctgagtacggcaacatgtccagc 240
Query: 281 gcctgcgtcctcttcatcctcgacgagatgcgcaagcgctccgccgaggacggacaggcc 340
|| ||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 241 gcgtgcgtgctcttcatcctcgacgagatgcgcaagcgctccgccgaagacggccaggcc 300
Query: 341 accacgggcgagggcctcgactggggcgtcctcttcggcttcggcccgggactcaccgtc 400
||||| || || ||| ||||||||||||| ||||||||||||||||| || |||||||||
Sbjct: 301 accaccggtgaaggcttcgactggggcgtgctcttcggcttcggccccgggctcaccgtc 360
Query: 401 gagaccgtcgtgctccacagcgtccccatcaccaccggagcggcca 446
||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 361 gagaccgtcgtgctccacagcgttcccatcaccaccggagcggcca 406
>gb|CX615996.1|CX615996 GABR1_25_E11.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_25_E11_A002 3', mRNA sequence
Length = 708
Score = 494 bits (249), Expect = e-138
Identities = 386/432 (89%)
Strand = Plus / Plus
Query: 15 agggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctcaaggacg 74
|||||||||| |||||||||||||| ||||| |||||||| ||||||||| |||||||||
Sbjct: 1 agggcgccattgacggccacctccgtgaggtcgggctcacgttccacctgntcaaggacg 60
Query: 75 tgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctcg 134
||||||||||||||||||| ||||| | ||| ||||||| || |||||||||||||| |
Sbjct: 61 tgcccgggctcatctccaaaaacatagagcgctcgctggaggaggcgttcaagccgctgg 120
Query: 135 gcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctcg 194
| ||| |||||| ||||||||||| |||||||||||||| |||||||| || ||||| |
Sbjct: 121 ggatcaccgactacaactccatcttttgggtggcgcaccctggcgggccagcaatcctgg 180
Query: 195 accaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtcc 254
|||||||||||||||||||| |||| || |||| ||||||| ||||| ||||| ||||
Sbjct: 181 accaggtggaggccaaggtcaggctagagaaggagcggatgcgtgccacgcgccatgtcc 240
Query: 255 tctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgca 314
| |||||||||||||||||||| || || ||||| |||||||||||||||||||||||||
Sbjct: 241 tgtccgagtacggcaacatgtctagtgcgtgcgtgctcttcatcctcgacgagatgcgca 300
Query: 315 agcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctct 374
| ||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| ||||
Sbjct: 301 aacgctccgccgaggacggccaggcaaccaccggcgaaggcttcgactggggcgtgctct 360
Query: 375 tcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcacca 434
|||||||||| || || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcggcttcggtcctgggctcaccgtcgagaccgtcgtgctccacagcgtccccatcacca 420
Query: 435 ccggagcggcca 446
||||||||||||
Sbjct: 421 ccggagcggcca 432
>gb|BG465925.1|BG465925 RHIZ2_46_C10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 559
Score = 492 bits (248), Expect = e-137
Identities = 362/400 (90%)
Strand = Plus / Plus
Query: 47 gggctcaccttccacctgctcaaggacgtgcccgggctcatctccaagaacatcggccgc 106
|||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 3 gggctcacgttccacctgctcaaggacgtgcccgggctcatctccaagaacatagagcgc 62
Query: 107 gcgctggacgacgcgttcaagccgctcggcatctccgactggaactccatcttctgggtg 166
||||||| || |||||||||||||| || ||| |||||| ||||||||||||||||||
Sbjct: 63 tcgctggaggaggcgttcaagccgctggggatcaccgactacaactccatcttctgggtg 122
Query: 167 gcgcaccccggcgggcccgccatcctcgaccaggtggaggccaaggtcgggctggacaag 226
|||||||| |||||||| || || || ||||||||||||||||||||||||||||| |||
Sbjct: 123 gcgcaccctggcgggccagcgattctggaccaggtggaggccaaggtcgggctggagaag 182
Query: 227 gccaggatgcgcgccacccgccacgtcctctccgagtacggcaacatgtccagcgcctgc 286
| ||||||| ||||| ||||| ||||| || ||||||||||||||||||||||| |||
Sbjct: 183 gagcggatgcgtgccacgcgccatgtcctatctgagtacggcaacatgtccagcgcgtgc 242
Query: 287 gtcctcttcatcctcgacgagatgcgcaagcgctccgccgaggacggacaggccaccacg 346
|| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 243 gtgctcttcatcctcgacgagatgcgcaagcgctccgccgaagacggccaggccaccacc 302
Query: 347 ggcgagggcctcgactggggcgtcctcttcggcttcggcccgggactcaccgtcgagacc 406
|| || ||| ||||||||||||| ||||||||||||||||| || |||||||||||||||
Sbjct: 303 ggtgaaggcttcgactggggcgtgctcttcggcttcggccccgggctcaccgtcgagacc 362
Query: 407 gtcgtgctccacagcgtccccatcaccaccggagcggcca 446
||||||||||||||||| ||||||||||||||||||||||
Sbjct: 363 gtcgtgctccacagcgttcccatcaccaccggagcggcca 402
>gb|CD462947.1|CD462947 ETH1_41_C09.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_41_C09_A002 3', mRNA sequence
Length = 614
Score = 482 bits (243), Expect = e-134
Identities = 387/435 (88%)
Strand = Plus / Plus
Query: 8 gactcggagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctc 67
||||| ||||||||||| || ||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 22 gactctgagggcgccattgatggccacctccgtgaggtcgggctcacgttccacctgctc 81
Query: 68 aaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaag 127
||||| || || |||||||||||||||||||||| ||| ||||||| || |||||||||
Sbjct: 82 aaggatgtccctgggctcatctccaagaacatcgagcgctcgctggaggaggcgttcaag 141
Query: 128 ccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgcc 187
||||| || ||| |||||| ||||||||||||||||||||||||||||| ||||| ||
Sbjct: 142 ccgctagggatcaccgactacaactccatcttctgggtggcgcaccccggtgggccagcg 201
Query: 188 atcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgc 247
||||| |||||||||||||||||||||||||| | |||| ||||||||||| || ||
Sbjct: 202 atcctggaccaggtggaggccaaggtcgggctaaagaaggagaggatgcgcgcgacgcga 261
Query: 248 cacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgag 307
|| ||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 262 catgtcctgtccgagtacggcaacatgtctagcgcctgcgtgctcttcatcctcgacgag 321
Query: 308 atgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggc 367
||||||||||||||||||||||| || ||||||||||| ||||| || | ||||||||
Sbjct: 322 atgcgcaagcgctccgccgaggatggccaggccaccaccggcgaaggttttgactggggt 381
Query: 368 gtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtcccc 427
|||||||| ||||| ||||| || |||||||||||||| |||||||||||||||||||||
Sbjct: 382 gtcctctttggctttggccccgggctcaccgtcgagactgtcgtgctccacagcgtcccc 441
Query: 428 atcaccaccggagcg 442
|||||||||||||||
Sbjct: 442 atcaccaccggagcg 456
>gb|AF152553.1|AF152553 Sorghum bicolor chalcone synthase 6 (CHS6) gene, complete cds
Length = 3366
Score = 482 bits (243), Expect = e-134
Identities = 387/435 (88%)
Strand = Plus / Plus
Query: 8 gactcggagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctc 67
||||| ||||||||||| || ||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 2793 gactctgagggcgccattgatggccacctccgtgaggtcgggctcacgttccacctgctc 2852
Query: 68 aaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaag 127
||||| || || |||||||||||||||||||||| ||| ||||||| || |||||||||
Sbjct: 2853 aaggatgtccctgggctcatctccaagaacatcgagcgctcgctggaggaggcgttcaag 2912
Query: 128 ccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgcc 187
||||| || ||| |||||| ||||||||||||||||||||||||||||| ||||| ||
Sbjct: 2913 ccgctagggatcaccgactacaactccatcttctgggtggcgcaccccggtgggccagcg 2972
Query: 188 atcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgc 247
||||| |||||||||||||||||||||||||| | |||| ||||||||||| || ||
Sbjct: 2973 atcctggaccaggtggaggccaaggtcgggctaaagaaggagaggatgcgcgcgacgcga 3032
Query: 248 cacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgag 307
|| ||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 3033 catgtcctgtccgagtacggcaacatgtctagcgcctgcgtgctcttcatcctcgacgag 3092
Query: 308 atgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggc 367
||||||||||||||||||||||| || ||||||||||| ||||| || | ||||||||
Sbjct: 3093 atgcgcaagcgctccgccgaggatggccaggccaccaccggcgaaggttttgactggggt 3152
Query: 368 gtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtcccc 427
|||||||| ||||| ||||| || |||||||||||||| |||||||||||||||||||||
Sbjct: 3153 gtcctctttggctttggccccgggctcaccgtcgagactgtcgtgctccacagcgtcccc 3212
Query: 428 atcaccaccggagcg 442
|||||||||||||||
Sbjct: 3213 atcaccaccggagcg 3227
>gb|BE358855.1|BE358855 DG1_32_D08.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 533
Score = 480 bits (242), Expect = e-133
Identities = 365/406 (89%)
Strand = Plus / Plus
Query: 41 gaggtggggctcaccttccacctgctcaaggacgtgcccgggctcatctccaagaacatc 100
||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 4 gaggtcgggctcacgttccacctgctcaaggacgtgcccgggctcatctccaaaaacata 63
Query: 101 ggccgcgcgctggacgacgcgttcaagccgctcggcatctccgactggaactccatcttc 160
| ||| ||||||| || |||||||||||||| || ||| |||||| ||||||||||||
Sbjct: 64 gagcgctcgctggaggaggcgttcaagccgctggggatcaccgactacaactccatcttc 123
Query: 161 tgggtggcgcaccccggcgggcccgccatcctcgaccaggtggaggccaaggtcgggctg 220
|||||||||||||| |||||||| || ||||| ||||||||||||||||||||||||||
Sbjct: 124 tgggtggcgcaccctggcgggccagcaatcctggaccaggtggaggccaaggtcgggcta 183
Query: 221 gacaaggccaggatgcgcgccacccgccacgtcctctccgagtacggcaacatgtccagc 280
|| |||| ||||||| ||||| ||||| ||||| |||||||||||||||||||| ||
Sbjct: 184 gagaaggagcggatgcgtgccacgcgccatgtcctgtccgagtacggcaacatgtctagt 243
Query: 281 gcctgcgtcctcttcatcctcgacgagatgcgcaagcgctccgccgaggacggacaggcc 340
|| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 244 gcgtgcgtgctcttcatcctcgacgagatgcgcaaacgctccgccgaggacggccaggca 303
Query: 341 accacgggcgagggcctcgactggggcgtcctcttcggcttcggcccgggactcaccgtc 400
||||| ||||| ||| ||||||||||||| |||||||||||||| || || |||||||||
Sbjct: 304 accaccggcgaaggcttcgactggggcgtgctcttcggcttcggtcctgggctcaccgtc 363
Query: 401 gagaccgtcgtgctccacagcgtccccatcaccaccggagcggcca 446
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gagaccgtcgtgctccacagcgtccccatcaccaccggagcggcca 409
>gb|CD431331.1|CD431331 ETH1_8_D10.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_8_D10_A002 3', mRNA sequence
Length = 558
Score = 474 bits (239), Expect = e-132
Identities = 359/399 (89%)
Strand = Plus / Plus
Query: 48 ggctcaccttccacctgctcaaggacgtgcccgggctcatctccaagaacatcggccgcg 107
||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 1 ggctcacgttccacctgctcaaggacgtgcccgggctcatctccaagaacatagagcgct 60
Query: 108 cgctggacgacgcgttcaagccgctcggcatctccgactggaactccatcttctgggtgg 167
||||||| || |||||||||||||| || ||| |||||| ||||||||||| |||||||
Sbjct: 61 cgctggaggaggcgttcaagccgctggggatcaccgactacaactccatcttttgggtgg 120
Query: 168 cgcaccccggcgggcccgccatcctcgaccaggtggaggccaaggtcgggctggacaagg 227
||||||| |||||||| || || || ||||||||||||||||||||||||||||| ||||
Sbjct: 121 cgcaccctggcgggccagcgattctggaccaggtggaggccaaggtcgggctggagaagg 180
Query: 228 ccaggatgcgcgccacccgccacgtcctctccgagtacggcaacatgtccagcgcctgcg 287
|| |||| ||||| ||||| ||||| || ||||||||||||||||||||||| ||||
Sbjct: 181 agcggctgcgtgccacgcgccatgtcctatctgagtacggcaacatgtccagcgcgtgcg 240
Query: 288 tcctcttcatcctcgacgagatgcgcaagcgctccgccgaggacggacaggccaccacgg 347
| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |
Sbjct: 241 tgctcttcatcctcgacgagatgcgcaagcgctccgccgaagacggccaggccaccaccg 300
Query: 348 gcgagggcctcgactggggcgtcctcttcggcttcggcccgggactcaccgtcgagaccg 407
| || ||| ||||||||||||| ||||||||||||||||| || ||||||||||||||||
Sbjct: 301 gtgaaggcttcgactggggcgtgctcttcggcttcggccccgggctcaccgtcgagaccg 360
Query: 408 tcgtgctccacagcgtccccatcaccaccggagcggcca 446
|||||||||||||||| ||||||||||||||||||||||
Sbjct: 361 tcgtgctccacagcgttcccatcaccaccggagcggcca 399
>gb|CN124863.1|CN124863 RHOH1_7_H06.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_7_H06_A002 3', mRNA sequence
Length = 795
Score = 474 bits (239), Expect = e-132
Identities = 386/435 (88%)
Strand = Plus / Plus
Query: 8 gactcggagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctc 67
||||| ||||||||||| || ||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 209 gactctgagggcgccattgatggccacctccgtgaggtcgggctcacgttccacctgctc 268
Query: 68 aaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaag 127
||||| || || |||||||||||||||||||||| ||| ||||||| || |||||||||
Sbjct: 269 aaggatgtccctgggctcatctccaagaacatcgagcgctcgctggaggaggcgttcaag 328
Query: 128 ccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgcc 187
||||| || ||| |||||| ||||||||||||||||||||||||||||| ||||| ||
Sbjct: 329 ccgctagggatcaccgactacaactccatcttctgggtggcgcaccccggtgggccagcg 388
Query: 188 atcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgc 247
||||| |||||||||||||||||||||||||| | |||| ||||||||||| || ||
Sbjct: 389 atcctggaccaggtggaggccaaggtcgggctaaagaaggagaggatgcgcgcgacgcga 448
Query: 248 cacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgag 307
|| ||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 449 catgtcctgtccgagtacggcaacatgtctagcgcctgcgtgctcttcatcctcgacgag 508
Query: 308 atgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggc 367
||||||||||||||||||||||| || ||||||||||| ||||| || | || |||||
Sbjct: 509 atgcgcaagcgctccgccgaggatggccaggccaccaccggcgaaggttttgaatggggt 568
Query: 368 gtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtcccc 427
|||||||| ||||| ||||| || |||||||||||||| |||||||||||||||||||||
Sbjct: 569 gtcctctttggctttggccccgggctcaccgtcgagactgtcgtgctccacagcgtcccc 628
Query: 428 atcaccaccggagcg 442
|||||||||||||||
Sbjct: 629 atcaccaccggagcg 643
>gb|CN135039.1|CN135039 OX1_30_D10.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_30_D10_A002 3', mRNA sequence
Length = 697
Score = 474 bits (239), Expect = e-132
Identities = 386/435 (88%)
Strand = Plus / Plus
Query: 8 gactcggagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctc 67
||||| ||||||||||| || ||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 100 gactctgagggcgccattgatggccacctccgtgaggtcgggctcacgttccacctgctc 159
Query: 68 aaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaag 127
||||| || || |||||||||||||||||||||| ||| ||||||| || |||||||||
Sbjct: 160 aaggatgtccctgggctcatctccaagaacatcgagcgctcgctggaggaggcgttcaag 219
Query: 128 ccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgcc 187
||||| || ||| |||||| ||||||||||||||||||||||||||||| ||||| ||
Sbjct: 220 ccgctagggatcaccgactacaactccatcttctgggtggcgcaccccggtgggccagcg 279
Query: 188 atcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgc 247
||| | |||||||||||||||||||||||||| | |||| ||||||||||| || ||
Sbjct: 280 atcttggaccaggtggaggccaaggtcgggctaaagaaggagaggatgcgcgcgacgcga 339
Query: 248 cacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgag 307
|| ||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 340 catgtcctgtccgagtacggcaacatgtctagcgcctgcgtgctcttcatcctcgacgag 399
Query: 308 atgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggc 367
||||||||||||||||||||||| || ||||||||||| ||||| || | ||||||||
Sbjct: 400 atgcgcaagcgctccgccgaggatggccaggccaccaccggcgaaggttttgactggggt 459
Query: 368 gtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtcccc 427
|||||||| ||||| ||||| || |||||||||||||| |||||||||||||||||||||
Sbjct: 460 gtcctctttggctttggccccgggctcaccgtcgagactgtcgtgctccacagcgtcccc 519
Query: 428 atcaccaccggagcg 442
|||||||||||||||
Sbjct: 520 atcaccaccggagcg 534
>gb|CN138700.1|CN138700 OX1_13_H11.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_13_H11_A002 3', mRNA sequence
Length = 751
Score = 474 bits (239), Expect = e-132
Identities = 386/435 (88%)
Strand = Plus / Plus
Query: 8 gactcggagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctc 67
||||| ||||||||||| || ||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 159 gactctgagggcgccattgatggccacctccgtgaggtcgggctcacgttccacctgctc 218
Query: 68 aaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaag 127
||||| || || |||||||||||||||||||||| ||| ||||||| || |||||||||
Sbjct: 219 aaggatgtccctgggctcatctccaagaacatcgagcgctcgctggaggaggcgttcaag 278
Query: 128 ccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgcc 187
||||| || ||| |||||| ||||||||||||||||||||||||||||| ||||| ||
Sbjct: 279 ccgctagggatcaccgactacaactccatcttctgggtggcgcaccccggtgggccagcg 338
Query: 188 atcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgc 247
||||| |||||||||||||||||||||||||| | |||| ||||||||||| || ||
Sbjct: 339 atcctggaccaggtggaggccaaggtcgggctaaagaaggagaggatgcgcgcgacgcga 398
Query: 248 cacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgag 307
|| ||||| |||||||||||||||||||| ||||||||||| |||||||||| |||||||
Sbjct: 399 catgtcctgtccgagtacggcaacatgtctagcgcctgcgtgctcttcatccccgacgag 458
Query: 308 atgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggc 367
||||||||||||||||||||||| || ||||||||||| ||||| || | ||||||||
Sbjct: 459 atgcgcaagcgctccgccgaggatggccaggccaccaccggcgaaggttttgactggggt 518
Query: 368 gtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtcccc 427
|||||||| ||||| ||||| || |||||||||||||| |||||||||||||||||||||
Sbjct: 519 gtcctctttggctttggccccgggctcaccgtcgagactgtcgtgctccacagcgtcccc 578
Query: 428 atcaccaccggagcg 442
|||||||||||||||
Sbjct: 579 atcaccaccggagcg 593
>gb|CX615434.1|CX615434 GABR1_20_D03.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_20_D03_A002 3', mRNA sequence
Length = 758
Score = 474 bits (239), Expect = e-132
Identities = 386/435 (88%)
Strand = Plus / Plus
Query: 8 gactcggagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctc 67
||||| ||||||||||| || ||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 172 gactctgagggcgccattgatggccacctccgtgaggtcgggctcacgttccacctgctc 231
Query: 68 aaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaag 127
||||| || || ||| |||||||||||||||||| ||| ||||||| || |||||||||
Sbjct: 232 aaggatgtccctgggttcatctccaagaacatcgagcgctcgctggaggaggcgttcaag 291
Query: 128 ccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgcc 187
||||| || ||| |||||| ||||||||||||||||||||||||||||| ||||| ||
Sbjct: 292 ccgctagggatcaccgactacaactccatcttctgggtggcgcaccccggtgggccagcg 351
Query: 188 atcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgc 247
||||| |||||||||||||||||||||||||| | |||| ||||||||||| || ||
Sbjct: 352 atcctggaccaggtggaggccaaggtcgggctaaagaaggagaggatgcgcgcgacgcga 411
Query: 248 cacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgag 307
|| ||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 412 catgtcctgtccgagtacggcaacatgtctagcgcctgcgtgctcttcatcctcgacgag 471
Query: 308 atgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggc 367
||||||||||||||||||||||| || ||||||||||| ||||| || | ||||||||
Sbjct: 472 atgcgcaagcgctccgccgaggatggccaggccaccaccggcgaaggttttgactggggt 531
Query: 368 gtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtcccc 427
|||||||| ||||| ||||| || |||||||||||||| |||||||||||||||||||||
Sbjct: 532 gtcctctttggctttggccccgggctcaccgtcgagactgtcgtgctccacagcgtcccc 591
Query: 428 atcaccaccggagcg 442
|||||||||||||||
Sbjct: 592 atcaccaccggagcg 606
>gb|CX622327.1|CX622327 GABR1_63_G08.b2_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_63_G08_A002 3', mRNA sequence
Length = 581
Score = 468 bits (236), Expect = e-130
Identities = 380/428 (88%)
Strand = Plus / Plus
Query: 15 agggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctcaaggacg 74
|||||||||| || ||||||||||| ||||| |||||||| ||||||||||||||||| |
Sbjct: 1 agggcgccattgatggccacctccgtgaggtcgggctcacgttccacctgctcaaggatg 60
Query: 75 tgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctcg 134
| || |||||||||||||||||||||| ||| ||||||| || |||||||||||||| |
Sbjct: 61 tccctgggctcatctccaagaacatcgagcgctcgctggaggaggcgttcaagccgctag 120
Query: 135 gcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctcg 194
| ||| |||||| ||||||||||||||||||||||||||||| ||||| || ||||| |
Sbjct: 121 ggatcaccgactacaactccatcttctgggtggcgcaccccggtgggccagcgatcctgg 180
Query: 195 accaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtcc 254
|||||||||||||||||||||||| | |||| ||||||||||| || || || ||||
Sbjct: 181 accaggtggaggccaaggtcgggccaaagaaggagaggatgcgcgcgacgcgacatgtcc 240
Query: 255 tctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgca 314
| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 241 tgtccgagtacggcaacatgtctagcgcctgcgtgctcttcatcctcgacgagatgcgca 300
Query: 315 agcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctct 374
|||||||||||||||| || ||||||||||| ||||| || | |||||||| |||||||
Sbjct: 301 agcgctccgccgaggatggccaggccaccaccggcgaaggttttgactggggtgtcctct 360
Query: 375 tcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcacca 434
| ||||| ||||| || |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 361 ttggctttggccccgggctcaccgtcgagactgtcgtgctccacagcgtccccatcacca 420
Query: 435 ccggagcg 442
||||||||
Sbjct: 421 ccggagcg 428
>gb|AF152551.1|AF152551 Sorghum bicolor chalcone synthase 4 (CHS4) gene, complete cds
Length = 2469
Score = 466 bits (235), Expect = e-129
Identities = 382/431 (88%)
Strand = Plus / Plus
Query: 8 gactcggagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctc 67
||||| |||||||||||||| ||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 1865 gactctgagggcgccatcgatggccacctccgtgaggtcgggctcacgttccacctgctc 1924
Query: 68 aaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaag 127
|||||||||||||||||||||||||||||||||| ||| || |||| || |||||||||
Sbjct: 1925 aaggacgtgcccgggctcatctccaagaacatcgagcgctcgttggaggaggcgttcaag 1984
Query: 128 ccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgcc 187
|| || || ||| |||||| ||||||||||||||||||||||||||||| ||||| ||
Sbjct: 1985 ccactagggatcaccgactacaactccatcttctgggtggcgcaccccggtgggccagca 2044
Query: 188 atcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgc 247
||||| |||||||||||||||||||||||||| | |||| |||||||||| || ||
Sbjct: 2045 atcctggaccaggtggaggccaaggtcgggctaaagaaggagcggatgcgcgcgacgcga 2104
Query: 248 cacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgag 307
|| ||||| ||||| |||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 2105 catgtcctgtccgaatacggcaacatgtctagcgcctgcgtgctcttcatcctcgacgag 2164
Query: 308 atgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggc 367
|||||||||||||| |||||||| || ||||||||||| || || ||| | ||||||||
Sbjct: 2165 atgcgcaagcgctctgccgaggatggccaggccaccaccggtgaaggcttggactggggt 2224
Query: 368 gtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtcccc 427
|||||||||||||||||||| || |||||||| ||||||||||||||||| |||||||||
Sbjct: 2225 gtcctcttcggcttcggccccgggctcaccgttgagaccgtcgtgctccatagcgtcccc 2284
Query: 428 atcaccaccgg 438
|| ||||||||
Sbjct: 2285 attaccaccgg 2295
>gb|CD428198.1|CD428198 ETH1_28_C04.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_28_C04_A002 3', mRNA sequence
Length = 599
Score = 462 bits (233), Expect = e-128
Identities = 377/425 (88%)
Strand = Plus / Plus
Query: 14 gagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctcaaggac 73
|||||||||||||| ||||||||||| ||||| |||||||| ||||||||||||||||||
Sbjct: 1 gagggcgccatcgatggccacctccgtgaggtcgggctcacgttccacctgctcaaggac 60
Query: 74 gtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctc 133
|||||||||||||||||||||||||||| ||| || |||| || ||||||||||| ||
Sbjct: 61 gtgcccgggctcatctccaagaacatcgagcgctcgttggaggaggcgttcaagccacta 120
Query: 134 ggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctc 193
|| ||| |||||| ||||||||||||||||||||||||||||| ||||| || |||||
Sbjct: 121 gggatcaccgactacaactccatcttctgggtggcgcaccccggtgggccagcaatcctg 180
Query: 194 gaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtc 253
|||||||||||||||||||||||||| | |||| |||||||||| || || || |||
Sbjct: 181 gaccaggtggaggccaaggtcgggctaaagaaggagcggatgcgcgcgacgcgacatgtc 240
Query: 254 ctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgc 313
|| ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 241 ctgtccgaatacggcaacatgtctagcgcctgcgtgctcttcatcctcgacgagatgcgc 300
Query: 314 aagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctc 373
|||||||| |||||||| || ||||||||||| || || ||| | |||||||| ||||||
Sbjct: 301 aagcgctctgccgaggatggccaggccaccaccggtgaaggcttggactggggtgtcctc 360
Query: 374 ttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcacc 433
|||||||||||||| || |||||||| ||||||||||||||||| ||||||||||| |||
Sbjct: 361 ttcggcttcggccccgggctcaccgttgagaccgtcgtgctccatagcgtccccattacc 420
Query: 434 accgg 438
|||||
Sbjct: 421 accgg 425
>gb|CF432833.1|CF432833 NIT1_19_F03.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_19_F03_A002 3', mRNA sequence
Length = 588
Score = 462 bits (233), Expect = e-128
Identities = 380/429 (88%)
Strand = Plus / Plus
Query: 14 gagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctcaaggac 73
||||||||||| || ||||||||||| ||||| |||||||| |||||||||||||||||
Sbjct: 1 gagggcgccattgatggccacctccgtgaggtcgggctcacgttccacctgctcaaggat 60
Query: 74 gtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctc 133
|| || |||||||||||||||||||||| ||| ||||||| || ||||||||||||||
Sbjct: 61 gtccctgggctcatctccaagaacatcgagcgctcgctggaggaggcgttcaagccgcta 120
Query: 134 ggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctc 193
|| ||| |||||| ||||||||||||||||||||||||||||| ||||| || |||||
Sbjct: 121 gggatcaccgactacaactccatcttctgggtggcgcaccccggtgggccagcgatcctg 180
Query: 194 gaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtc 253
|||||||||||||||||||||||||| | |||| ||||||||||| || || || |||
Sbjct: 181 gaccaggtggaggccaaggtcgggctaaagaaggagaggatgcgcgcgacgcgacatgtc 240
Query: 254 ctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgc 313
|| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 241 ctgtccgagtacggcaacatgtctagcgcctgcgtgctcttcatcctcgacgagatgcgc 300
Query: 314 aagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctc 373
||||||||||||||||| || ||||||||||| ||| | || | |||||||| ||||||
Sbjct: 301 aagcgctccgccgaggatggccaggccaccaccggcaaaggttttgactggggtgtcctc 360
Query: 374 ttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcacc 433
|| ||||| ||||| || |||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 361 tttggctttggccccgggctcaccgtcgagactgtcgtgctccacggcgtccccatcacc 420
Query: 434 accggagcg 442
|||||||||
Sbjct: 421 accggagcg 429
>gb|CF433944.1|CF433944 NIT1_31_C08.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_31_C08_A002 3', mRNA sequence
Length = 618
Score = 462 bits (233), Expect = e-128
Identities = 377/425 (88%)
Strand = Plus / Plus
Query: 14 gagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctcaaggac 73
|||||||||||||| ||||||||||| ||||| |||||||| ||||||||||||||||||
Sbjct: 1 gagggcgccatcgatggccacctccgtgaggtcgggctcacgttccacctgctcaaggac 60
Query: 74 gtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctc 133
|||||||||||||||||||||||||||| ||| || |||| || ||||||||||| ||
Sbjct: 61 gtgcccgggctcatctccaagaacatcgagcgctcgttggaggaggcgttcaagccacta 120
Query: 134 ggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctc 193
|| ||| |||||| ||||||||||||||||||||||||||||| ||||| || |||||
Sbjct: 121 gggatcaccgactacaactccatcttctgggtggcgcaccccggtgggccagcaatcctg 180
Query: 194 gaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtc 253
|||||||||||||||||||||||||| | |||| |||||||||| || || || |||
Sbjct: 181 gaccaggtggaggccaaggtcgggctaaagaaggagcggatgcgcgcgacgcgacatgtc 240
Query: 254 ctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgc 313
|| ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 241 ctgtccgaatacggcaacatgtctagcgcctgcgtgctcttcatcctcgacgagatgcgc 300
Query: 314 aagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctc 373
|||||||| |||||||| || ||||||||||| || || ||| | |||||||| ||||||
Sbjct: 301 aagcgctctgccgaggatggccaggccaccaccggtgaaggcttggactggggtgtcctc 360
Query: 374 ttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcacc 433
|||||||||||||| || |||||||| ||||||||||||||||| ||||||||||| |||
Sbjct: 361 ttcggcttcggccccgggctcaccgttgagaccgtcgtgctccatagcgtccccattacc 420
Query: 434 accgg 438
|||||
Sbjct: 421 accgg 425
>gb|CX608033.1|CX608033 ANR1_32_F01.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_32_F01_A002 3', mRNA sequence
Length = 586
Score = 460 bits (232), Expect = e-128
Identities = 376/424 (88%)
Strand = Plus / Plus
Query: 17 ggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctcaaggacgtg 76
|||||||| || ||||||||||| ||||| |||||||| ||||||||||||||||| ||
Sbjct: 1 ggcgccattgatggccacctccgtgaggtcgggctcacgttccacctgctcaaggatgtc 60
Query: 77 cccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctcggc 136
|| |||||||||||||||||||||| ||| ||||||| || |||||||||||| | ||
Sbjct: 61 cctgggctcatctccaagaacatcgagcgctcgctggaggaggcgttcaagccgttaggg 120
Query: 137 atctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctcgac 196
||| |||||| ||||||||||||||||||||||||||||| ||||| || ||||| |||
Sbjct: 121 atcaccgactacaactccatcttctgggtggcgcaccccggtgggccagcgatcctggac 180
Query: 197 caggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtcctc 256
||||||||||||||||||||||| | |||| ||||||||||| || || || |||||
Sbjct: 181 caggtggaggccaaggtcgggctaaagaaggagaggatgcgcgcgacgcgacatgtcctg 240
Query: 257 tccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgcaag 316
|||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 241 tccgagtacggcaacatgtctagcgcctgcgtgctcttcatcctcgacgagatgcgcaag 300
Query: 317 cgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctcttc 376
|||||||||||||| || ||||||||||| ||||| || | |||||||| ||||||||
Sbjct: 301 cgctccgccgaggatggccaggccaccaccggcgaaggttttgactggggtgtcctcttt 360
Query: 377 ggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcaccacc 436
||||| ||||| || |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 361 ggctttggccccgggctcaccgtcgagactgtcgtgctccacagcgtccccatcaccacc 420
Query: 437 ggag 440
||||
Sbjct: 421 ggag 424
>gb|CF430205.1|CF430205 PH1_26_C05.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_26_C05_A002 5', mRNA sequence
Length = 688
Score = 446 bits (225), Expect = e-123
Identities = 342/381 (89%)
Strand = Plus / Minus
Query: 66 tcaaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttca 125
|||||||||||||||||||||||||||| ||||| | ||| ||||||| || |||||||
Sbjct: 688 tcaaggacgtgcccgggctcatctccaaaaacatagagcgctcgctggaggaggcgttca 629
Query: 126 agccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccg 185
||||||| || ||| |||||| |||||||||||||||||||||||||| |||||||| |
Sbjct: 628 agccgctggggatcaccgactacaactccatcttctgggtggcgcaccctggcgggccag 569
Query: 186 ccatcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccaccc 245
| ||||| |||||||||||||||||||||||||| || |||| ||||||| ||||| |
Sbjct: 568 caatcctggaccaggtggaggccaaggtcgggctagagaaggagcggatgcgtgccacgc 509
Query: 246 gccacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacg 305
|||| ||||| |||||||||||||||||||| || || ||||| ||||||||||||||||
Sbjct: 508 gccatgtcctgtccgagtacggcaacatgtctagtgcgtgcgtgctcttcatcctcgacg 449
Query: 306 agatgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggg 365
|||||||||| ||||||||||||||||| ||||| ||||| ||||| ||| |||||||||
Sbjct: 448 agatgcgcaaacgctccgccgaggacggccaggcaaccaccggcgaaggcttcgactggg 389
Query: 366 gcgtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtcc 425
|||| |||||||||||||| || || ||||||||||||||||||||||||||||||||||
Sbjct: 388 gcgtgctcttcggcttcggtcctgggctcaccgtcgagaccgtcgtgctccacagcgtcc 329
Query: 426 ccatcaccaccggagcggcca 446
|||||||||||||||||||||
Sbjct: 328 ccatcaccaccggagcggcca 308
>gb|CN138481.1|CN138481 OX1_64_C03.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_64_C03_A002 3', mRNA sequence
Length = 750
Score = 446 bits (225), Expect = e-123
Identities = 375/425 (88%)
Strand = Plus / Plus
Query: 14 gagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctcaaggac 73
|||||||||||||| ||||||||||| ||||| |||||||| ||||||||||||||||||
Sbjct: 131 gagggcgccatcgatggccacctccgtgaggtcgggctcacgttccacctgctcaaggac 190
Query: 74 gtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctc 133
|||||||||||||||||||||||||||| ||| || |||| || ||||||||||| ||
Sbjct: 191 gtgcccgggctcatctccaagaacatcgagcgctcgttggaggaggcgttcaagccacta 250
Query: 134 ggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctc 193
|| ||| |||||| |||||||| || ||||||||||||||||| ||||| || |||||
Sbjct: 251 gggatcaccgactacaactccattttttgggtggcgcaccccggtgggccagcaatcctg 310
Query: 194 gaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtc 253
|||||||||||||||||||||||||| | |||| |||||||||| || || || |||
Sbjct: 311 gaccaggtggaggccaaggtcgggctaaagaaggagcggatgcgcgcgacgcgacatgtc 370
Query: 254 ctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgc 313
|| ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 371 ctgtccgaatacggcaacatgtctagcgcctgcgtgctcttcatcctcgacgagatgcgc 430
Query: 314 aagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctc 373
|||||||| |||||||| || ||||||||||| || || ||| | |||||||| ||||||
Sbjct: 431 aagcgctctgccgaggatggccaggccaccaccggtgaaggcttggactggggtgtcctc 490
Query: 374 ttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcacc 433
|||||||||||||| || |||||||| ||||||||||||||||| ||||||||||| |||
Sbjct: 491 ttcggcttcggccccgggctcaccgttgagaccgtcgtgctccatagcgtccccattacc 550
Query: 434 accgg 438
|||||
Sbjct: 551 accgg 555
>gb|AF152548.1|AF152548 Sorghum bicolor chalcone synthase 1 (CHS1) gene, complete cds
Length = 2078
Score = 444 bits (224), Expect = e-123
Identities = 389/444 (87%)
Strand = Plus / Plus
Query: 1 cctgcccgactcggagggcgccatcgacggccacctccgcgaggtggggctcaccttcca 60
|||||| ||||| |||||||||||||||||||||||||||||||| |||||||| || ||
Sbjct: 1473 cctgccggactccgagggcgccatcgacggccacctccgcgaggtcgggctcacgtttca 1532
Query: 61 cctgctcaaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgc 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||
Sbjct: 1533 cctgctcaaggacgtgcccgggctcatctccaagaacatcgagcgcgcgctggaggaggc 1592
Query: 121 gttcaagccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcgg 180
|||||||| || || || | |||| ||||||||||||||||||||||||||||| ||
Sbjct: 1593 attcaagccactggggataactgactacaactccatcttctgggtggcgcaccccggtgg 1652
Query: 181 gcccgccatcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgc 240
||| || ||||| |||||||||||||||||||||||||| || || | ||||||||||
Sbjct: 1653 gccggcgatcctggaccaggtggaggccaaggtcgggctagagaaagagcggatgcgcgc 1712
Query: 241 cacccgccacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcct 300
||| || || ||| | || ||||||||||||||||| |||||||| || |||||||||||
Sbjct: 1713 cacgcgtcatgtcttgtctgagtacggcaacatgtctagcgcctgtgtgctcttcatcct 1772
Query: 301 cgacgagatgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcga 360
||| |||||||||||||||||||||||||| || || ||||||||||||| ||| | ||
Sbjct: 1773 cgatgagatgcgcaagcgctccgccgaggatggccaaaccaccacgggcgaaggctttga 1832
Query: 361 ctggggcgtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacag 420
|||||||| ||||| |||||||| || || |||||||| || |||||||||||||||||
Sbjct: 1833 ttggggcgtactctttggcttcggtcccgggctcaccgttgaaaccgtcgtgctccacag 1892
Query: 421 cgtccccatcaccaccggagcggc 444
||||||||||||||| || |||||
Sbjct: 1893 cgtccccatcaccactggcgcggc 1916
>gb|CN125053.1|CN125053 RHOH1_8_C09.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_8_C09_A002 5', mRNA sequence
Length = 795
Score = 442 bits (223), Expect = e-122
Identities = 382/435 (87%)
Strand = Plus / Plus
Query: 1 cctgcccgactcggagggcgccatcgacggccacctccgcgaggtggggctcaccttcca 60
|||||| ||||| |||||||||||||||||||||||||||||||| |||||||| || ||
Sbjct: 360 cctgccggactccgagggcgccatcgacggccacctccgcgaggtcgggctcacgtttca 419
Query: 61 cctgctcaaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgc 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||
Sbjct: 420 cctgctcaaggacgtgcccgggctcatctccaagaacatcgagcgcgcgctggaggaggc 479
Query: 121 gttcaagccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcgg 180
|||||||| || || || | |||| ||||||||||||||||||||||||||||| ||
Sbjct: 480 attcaagccactggggataactgactacaactccatcttctgggtggcgcaccccggtgg 539
Query: 181 gcccgccatcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgc 240
||| || ||||| |||||||||||||||||||||||||| || || | ||||||||||
Sbjct: 540 gccggcgatcctggaccaggtggaggccaaggtcgggctagagaaagagcggatgcgcgc 599
Query: 241 cacccgccacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcct 300
||| || || ||| | || ||||||||||||||||| |||||||| || |||||||||||
Sbjct: 600 cacgcgtcatgtcttgtctgagtacggcaacatgtctagcgcctgtgtgctcttcatcct 659
Query: 301 cgacgagatgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcga 360
||| |||||||||||||||||||||||||| || || ||||||||||||| ||| | ||
Sbjct: 660 cgatgagatgcgcaagcgctccgccgaggatggccaaaccaccacgggcgaaggctttga 719
Query: 361 ctggggcgtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacag 420
|||||||| ||||| |||||||| || || |||||||| || |||||||||||||||||
Sbjct: 720 ttggggcgtactctttggcttcggtcccgggctcaccgttgaaaccgtcgtgctccacag 779
Query: 421 cgtccccatcaccac 435
|||||||||||||||
Sbjct: 780 cgtccccatcaccac 794
>gb|AF152554.1|AF152554 Sorghum bicolor chalcone synthase 7 (CHS7) gene, complete cds
Length = 1847
Score = 438 bits (221), Expect = e-121
Identities = 374/425 (88%)
Strand = Plus / Plus
Query: 8 gactcggagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctc 67
||||| |||||||||||||||||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 1369 gactccgagggcgccatcgacggccacctccgtgaggtcgggctcacgttccacctgctc 1428
Query: 68 aaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaag 127
||||||||||| |||||||||||||||||||| | ||| |||| || || || ||||||
Sbjct: 1429 aaggacgtgcctgggctcatctccaagaacatagagcgctcgctagaggaggcattcaag 1488
Query: 128 ccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgcc 187
||||| || ||| |||||| ||||||||||| ||||||||||||||||| ||||| ||
Sbjct: 1489 ccgctggggatcaccgactacaactccatcttttgggtggcgcaccccggtgggccggcg 1548
Query: 188 atcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgc 247
||||| |||||||||||||||||||||||||| | |||| |||||||||| || ||
Sbjct: 1549 atcctggaccaggtggaggccaaggtcgggctaaagaaggagcggatgcgcgcgacgcga 1608
Query: 248 cacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgag 307
|| ||||| |||||||||||||||||||| || |||||||| ||||||||||||||||||
Sbjct: 1609 catgtcctgtccgagtacggcaacatgtctagtgcctgcgtgctcttcatcctcgacgag 1668
Query: 308 atgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggc 367
|||||||| |||||||||||||| || ||||||||||| || || ||| | |||||||||
Sbjct: 1669 atgcgcaaacgctccgccgaggagggccaggccaccaccggagaaggctttgactggggc 1728
Query: 368 gtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtcccc 427
|||||||| ||||| ||||| || |||||||||||||| || ||||||||||||||||||
Sbjct: 1729 gtcctctttggctttggccccgggctcaccgtcgagactgttgtgctccacagcgtcccc 1788
Query: 428 atcac 432
|||||
Sbjct: 1789 atcac 1793
>gb|BG605853.1|BG605853 RHIZ2_82_C10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 656
Score = 434 bits (219), Expect = e-120
Identities = 336/375 (89%)
Strand = Plus / Plus
Query: 72 acgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgc 131
|||||||||||||||||||||| ||||| | ||| ||||||| || |||||||||||||
Sbjct: 1 acgtgcccgggctcatctccaaaaacatagagcgctcgctggaggaggcgttcaagccgc 60
Query: 132 tcggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcc 191
| || ||| |||||| |||||||||||||||||||||||||| |||||||| || ||||
Sbjct: 61 tggggatcaccgactacaactccatcttctgggtggcgcaccctggcgggccagcaatcc 120
Query: 192 tcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacg 251
| |||||||||||||||||||||||||| || |||| ||||||| ||||| ||||| |
Sbjct: 121 tggaccaggtggaggccaaggtcgggctagagaaggagcggatgcgtgccacgcgccatg 180
Query: 252 tcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgc 311
|||| |||||||||||||||||||| || || ||||| ||||||||||||||||||||||
Sbjct: 181 tcctgtccgagtacggcaacatgtctagtgcgtgcgtgctcttcatcctcgacgagatgc 240
Query: 312 gcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcc 371
|||| ||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| |
Sbjct: 241 gcaaacgctccgccgaggacggccaggcaaccaccggcgaaggcttcgactggggcgtgc 300
Query: 372 tcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatca 431
||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcttcggcttcggtcctgggctcaccgtcgagaccgtcgtgctccacagcgtccccatca 360
Query: 432 ccaccggagcggcca 446
|||||||||||||||
Sbjct: 361 ccaccggagcggcca 375
>gb|CD463544.1|CD463544 ETH1_45_A06.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_45_A06_A002 3', mRNA sequence
Length = 601
Score = 434 bits (219), Expect = e-120
Identities = 369/419 (88%)
Strand = Plus / Plus
Query: 14 gagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctcaaggac 73
|||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||
Sbjct: 1 gagggcgccatcgacggccacctccgtgaggtcgggctcacgttccacctgctcaaggac 60
Query: 74 gtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctc 133
||||| |||||||||||||||||||| | ||| |||| || || || |||||||||||
Sbjct: 61 gtgcctgggctcatctccaagaacatagagcgctcgctagaggaggcattcaagccgctg 120
Query: 134 ggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctc 193
|| ||| |||||| ||||||||||| ||||||||||||||||| ||||| || |||||
Sbjct: 121 gggatcaccgactacaactccatcttttgggtggcgcaccccggtgggccggcgatcctg 180
Query: 194 gaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtc 253
|||||||||||||||||||||||||| | |||| |||||||||| || || || |||
Sbjct: 181 gaccaggtggaggccaaggtcgggctaaagaaggagcggatgcgcgcgacgcgacatgtc 240
Query: 254 ctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgc 313
|| |||||||||||||||||||| || |||||||| ||||||||||||||||||||||||
Sbjct: 241 ctgtccgagtacggcaacatgtctagtgcctgcgtgctcttcatcctcgacgagatgcgc 300
Query: 314 aagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctc 373
|| |||||||||||||| || ||||||||||| || || ||| | |||||||||||||||
Sbjct: 301 aaacgctccgccgaggagggccaggccaccaccggagaaggctttgactggggcgtcctc 360
Query: 374 ttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcac 432
|| ||||| ||||| || |||||||||||||| || |||||||||||||||||||||||
Sbjct: 361 tttggctttggccccgggctcaccgtcgagactgttgtgctccacagcgtccccatcac 419
>gb|CX615465.1|CX615465 GABR1_20_G03.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_20_G03_A002 3', mRNA sequence
Length = 602
Score = 434 bits (219), Expect = e-120
Identities = 375/427 (87%)
Strand = Plus / Plus
Query: 14 gagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctcaaggac 73
||||||||||| || ||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 30 gagggcgccattgatggccacctccgtgaggtggggctcacgttccacctgctcaaggat 89
Query: 74 gtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctc 133
|| || |||||||||||||||||||||| ||| ||||||| || ||||||||||||||
Sbjct: 90 gtccctgggctcatctccaagaacatcgagcgctcgctggaggaggcgttcaagccgcta 149
Query: 134 ggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctc 193
|| ||| |||||| |||||||| || ||||||||||||||||| ||||| || |||||
Sbjct: 150 gggatcaccgactacaactccattttttgggtggcgcaccccggtgggccagcgatcctg 209
Query: 194 gaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtc 253
|||||||||||||||||||||||||| | |||| |||||||||| || || || |||
Sbjct: 210 gaccaggtggaggccaaggtcgggctaaagaaggagaggatgcgcgggacgcgacatgtc 269
Query: 254 ctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgc 313
|| |||||||||||||||||||| ||||||||||| || |||||||||||||||||||||
Sbjct: 270 ctgtccgagtacggcaacatgtctagcgcctgcgtgcttttcatcctcgacgagatgcgc 329
Query: 314 aagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctc 373
||||| ||||||||||| || ||||||||||| ||||| || | |||||||| ||||||
Sbjct: 330 aagcgttccgccgaggatggccaggccaccaccggcgaaggttttgactggggtgtcctc 389
Query: 374 ttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcacc 433
|| ||||| ||||| || |||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 390 tttggctttggccccgggctcaccgtcgagactgtcgtgctccacagggtccccatcacc 449
Query: 434 accggag 440
|||||||
Sbjct: 450 accggag 456
>gb|BF177058.1|BF177058 EM1_3_B02.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 606
Score = 430 bits (217), Expect = e-119
Identities = 373/425 (87%)
Strand = Plus / Plus
Query: 8 gactcggagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctc 67
||||| |||||||||||||||||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 31 gactccgagggcgccatcgacggccacctccgtgaggtcgggctcacgttccacctgctc 90
Query: 68 aaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaag 127
||||||||||| |||||||||||||||||||| | ||| |||| || || || ||||||
Sbjct: 91 aaggacgtgcctgggctcatctccaagaacatagagcgctcgctagaggaggcattcaag 150
Query: 128 ccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgcc 187
||||| || ||| |||||| ||||||||||| ||||||||||||||||| ||||| |
Sbjct: 151 ccgctggggatcaccgactacaactccatcttttgggtggcgcaccccggtgggccgccg 210
Query: 188 atcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgc 247
||||| |||||||||||||||||||||||||| | |||| |||||||||| || ||
Sbjct: 211 atcctggaccaggtggaggccaaggtcgggctaaagaaggagcggatgcgcgcgacgcga 270
Query: 248 cacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgag 307
|| ||||| |||||||||||||||||||| || |||||||| ||||||||||||||||||
Sbjct: 271 catgtcctgtccgagtacggcaacatgtctagtgcctgcgtgctcttcatcctcgacgag 330
Query: 308 atgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggc 367
|||||||| |||||||||||||| || ||||||||||| || || ||| | |||||||||
Sbjct: 331 atgcgcaaacgctccgccgaggagggccaggccaccaccggagaaggctttgactggggc 390
Query: 368 gtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtcccc 427
|||||||| ||||| ||||| || |||||||||||||| || ||||||||||||||||||
Sbjct: 391 gtcctctttggctttggccccgggctcaccgtcgagactgttgtgctccacagcgtcccc 450
Query: 428 atcac 432
|||||
Sbjct: 451 atcac 455
>gb|CD430325.1|CD430325 ETH1_18_G09.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_18_G09_A002 3', mRNA sequence
Length = 628
Score = 430 bits (217), Expect = e-119
Identities = 373/425 (87%)
Strand = Plus / Plus
Query: 8 gactcggagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctc 67
||||| |||||||||||||||||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 18 gactccgagggcgccatcgacggccacctccgtgaggtcgggctcacgttccacctgctc 77
Query: 68 aaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaag 127
||||||||||| |||||||||||||||||||| | ||| |||| || || || ||||||
Sbjct: 78 aaggacgtgcctgggctcatctccaagaacatagagcgctcgctagaggaggcattcaag 137
Query: 128 ccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgcc 187
||||| || ||| |||||| ||||||||||| ||||||||||||||||| ||||| ||
Sbjct: 138 ccgctggggatcaccgactacaactccatcttttgggtggcgcaccccggtgggccggcg 197
Query: 188 atcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgc 247
||||| |||||||||||||||||||||||||| | |||| |||||||||| || ||
Sbjct: 198 atcctggaccaggtggaggccaaggtcgggctaaagaaggagcggatgcgcgcgacgcga 257
Query: 248 cacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgag 307
|| ||||| |||| ||||||||||||||| || |||||||| ||||||||||||||||||
Sbjct: 258 catgtcctgtccgggtacggcaacatgtctagtgcctgcgtgctcttcatcctcgacgag 317
Query: 308 atgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggc 367
|||||||| |||||||||||||| || ||||||||||| || || ||| | |||||||||
Sbjct: 318 atgcgcaaacgctccgccgaggagggccaggccaccaccggagaaggctttgactggggc 377
Query: 368 gtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtcccc 427
|||||||| ||||| ||||| || |||||||||||||| || ||||||||||||||||||
Sbjct: 378 gtcctctttggctttggccccgggctcaccgtcgagactgttgtgctccacagcgtcccc 437
Query: 428 atcac 432
|||||
Sbjct: 438 atcac 442
>gb|CN134537.1|CN134537 OX1_27_A10.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_27_A10_A002 3', mRNA sequence
Length = 799
Score = 430 bits (217), Expect = e-119
Identities = 373/425 (87%)
Strand = Plus / Plus
Query: 8 gactcggagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctc 67
||||| |||||||||||||||||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 193 gactccgagggcgccatcgacggccacctccgtgaggtcgggctcacgttccacctgctc 252
Query: 68 aaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaag 127
||||||||||| |||||||||||||||||||| | ||| |||| || || || ||||||
Sbjct: 253 aaggacgtgcctgggctcatctccaagaacatagagcgctcgctagaggaggcattcaag 312
Query: 128 ccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgcc 187
||||| || ||| |||||| ||||||||||| ||||||||||||||||| || || ||
Sbjct: 313 ccgctggggatcaccgactacaactccatcttttgggtggcgcaccccggtggaccggcg 372
Query: 188 atcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgc 247
||||| |||||||||||||||||||||||||| | |||| |||||||||| || ||
Sbjct: 373 atcctggaccaggtggaggccaaggtcgggctaaagaaggagcggatgcgcgcgacgcga 432
Query: 248 cacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgag 307
|| ||||| |||||||||||||||||||| || |||||||| ||||||||||||||||||
Sbjct: 433 catgtcctgtccgagtacggcaacatgtctagtgcctgcgtgctcttcatcctcgacgag 492
Query: 308 atgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggc 367
|||||||| |||||||||||||| || ||||||||||| || || ||| | |||||||||
Sbjct: 493 atgcgcaaacgctccgccgaggagggccaggccaccaccggagaaggctttgactggggc 552
Query: 368 gtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtcccc 427
|||||||| ||||| ||||| || |||||||||||||| || ||||||||||||||||||
Sbjct: 553 gtcctctttggctttggccccgggctcaccgtcgagactgttgtgctccacagcgtcccc 612
Query: 428 atcac 432
|||||
Sbjct: 613 atcac 617
>gb|AW283504.1|AW283504 LG1_265_C05.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 591
Score = 420 bits (212), Expect = e-116
Identities = 347/392 (88%)
Strand = Plus / Plus
Query: 47 gggctcaccttccacctgctcaaggacgtgcccgggctcatctccaagaacatcggccgc 106
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 5 gggctcacgttccacctgctcaaggacgtgcccgggctcatctccaagaacatcgagcgc 64
Query: 107 gcgctggacgacgcgttcaagccgctcggcatctccgactggaactccatcttctgggtg 166
|| |||| || ||||||||||| || || ||| |||||| ||||||||||||||||||
Sbjct: 65 tcgttggaggaggcgttcaagccactagggatcaccgactacaactccatcttctgggtg 124
Query: 167 gcgcaccccggcgggcccgccatcctcgaccaggtggaggccaaggtcgggctggacaag 226
||||||||||| ||||| || ||||| |||||||||||||||||||||||||| | |||
Sbjct: 125 gcgcaccccggtgggccagcaatcctggaccaggtggaggccaaggtcgggctaaagaag 184
Query: 227 gccaggatgcgcgccacccgccacgtcctctccgagtacggcaacatgtccagcgcctgc 286
| |||||||||| || || || ||||| ||||| |||||||||||||| |||||||||
Sbjct: 185 gagcggatgcgcgcgacgcgacatgtcctgtccgaatacggcaacatgtctagcgcctgc 244
Query: 287 gtcctcttcatcctcgacgagatgcgcaagcgctccgccgaggacggacaggccaccacg 346
|| |||||||||||||||||||||||||||||||| |||||||| || |||||||||||
Sbjct: 245 gtgctcttcatcctcgacgagatgcgcaagcgctctgccgaggatggccaggccaccacc 304
Query: 347 ggcgagggcctcgactggggcgtcctcttcggcttcggcccgggactcaccgtcgagacc 406
|| || ||| | |||||||| |||||||||||||||||||| || |||||||| ||||||
Sbjct: 305 ggtgaaggcttggactggggtgtcctcttcggcttcggccccgggctcaccgttgagacc 364
Query: 407 gtcgtgctccacagcgtccccatcaccaccgg 438
||||||||||| ||||||||||| ||||||||
Sbjct: 365 gtcgtgctccatagcgtccccattaccaccgg 396
>gb|AW283518.1|AW283518 LG1_265_A05.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 590
Score = 420 bits (212), Expect = e-116
Identities = 347/392 (88%)
Strand = Plus / Plus
Query: 47 gggctcaccttccacctgctcaaggacgtgcccgggctcatctccaagaacatcggccgc 106
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 4 gggctcacgttccacctgctcaaggacgtgcccgggctcatctccaagaacatcgagcgc 63
Query: 107 gcgctggacgacgcgttcaagccgctcggcatctccgactggaactccatcttctgggtg 166
|| |||| || ||||||||||| || || ||| |||||| ||||||||||||||||||
Sbjct: 64 tcgttggaggaggcgttcaagccactagggatcaccgactacaactccatcttctgggtg 123
Query: 167 gcgcaccccggcgggcccgccatcctcgaccaggtggaggccaaggtcgggctggacaag 226
||||||||||| ||||| || ||||| |||||||||||||||||||||||||| | |||
Sbjct: 124 gcgcaccccggtgggccagcaatcctggaccaggtggaggccaaggtcgggctaaagaag 183
Query: 227 gccaggatgcgcgccacccgccacgtcctctccgagtacggcaacatgtccagcgcctgc 286
| |||||||||| || || || ||||| ||||| |||||||||||||| |||||||||
Sbjct: 184 gagcggatgcgcgcgacgcgacatgtcctgtccgaatacggcaacatgtctagcgcctgc 243
Query: 287 gtcctcttcatcctcgacgagatgcgcaagcgctccgccgaggacggacaggccaccacg 346
|| |||||||||||||||||||||||||||||||| |||||||| || |||||||||||
Sbjct: 244 gtgctcttcatcctcgacgagatgcgcaagcgctctgccgaggatggccaggccaccacc 303
Query: 347 ggcgagggcctcgactggggcgtcctcttcggcttcggcccgggactcaccgtcgagacc 406
|| || ||| | |||||||| |||||||||||||||||||| || |||||||| ||||||
Sbjct: 304 ggtgaaggcttggactggggtgtcctcttcggcttcggccccgggctcaccgttgagacc 363
Query: 407 gtcgtgctccacagcgtccccatcaccaccgg 438
||||||||||| ||||||||||| ||||||||
Sbjct: 364 gtcgtgctccatagcgtccccattaccaccgg 395
>gb|CD430484.1|CD430484 ETH1_19_D10.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_19_D10_A002 3', mRNA sequence
Length = 595
Score = 416 bits (210), Expect = e-114
Identities = 351/398 (88%)
Strand = Plus / Plus
Query: 41 gaggtggggctcaccttccacctgctcaaggacgtgcccgggctcatctccaagaacatc 100
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 gaggtcgggctcacgttccacctgctcaaggacgtgcccgggctcatctccaagaacatc 63
Query: 101 ggccgcgcgctggacgacgcgttcaagccgctcggcatctccgactggaactccatcttc 160
| ||| || |||| || ||||||||||| || || ||| |||||| ||| ||||||||
Sbjct: 64 gagcgctcgttggaggaggcgttcaagccactagggatcaccgactacaaccccatcttc 123
Query: 161 tgggtggcgcaccccggcgggcccgccatcctcgaccaggtggaggccaaggtcgggctg 220
||||||||||||||||| ||||| || ||||| ||||||||||||||||||||||||||
Sbjct: 124 tgggtggcgcaccccggtgggccagcaatcctggaccaggtggaggccaaggtcgggcta 183
Query: 221 gacaaggccaggatgcgcgccacccgccacgtcctctccgagtacggcaacatgtccagc 280
| |||| |||||||||| || || || ||||| ||||| |||||||||||||| |||
Sbjct: 184 aagaaggagcggatgcgcgcgacgcgacatgtcctgtccgaatacggcaacatgtctagc 243
Query: 281 gcctgcgtcctcttcatcctcgacgagatgcgcaagcgctccgccgaggacggacaggcc 340
|||||||| |||||||||||||||||||||||||||||||| |||||||| || ||||||
Sbjct: 244 gcctgcgtgctcttcatcctcgacgagatgcgcaagcgctctgccgaggatggccaggcc 303
Query: 341 accacgggcgagggcctcgactggggcgtcctcttcggcttcggcccgggactcaccgtc 400
||||| || || ||| | |||||||| |||||||||||||||||||| || ||||||||
Sbjct: 304 accaccggtgaaggcttggactggggtgtcctcttcggcttcggccccgggctcaccgtt 363
Query: 401 gagaccgtcgtgctccacagcgtccccatcaccaccgg 438
||||||||||||||||| ||||||||||| ||||||||
Sbjct: 364 gagaccgtcgtgctccatagcgtccccattaccaccgg 401
>gb|CN137453.1|CN137453 OX1_57_H07.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_57_H07_A002 3', mRNA sequence
Length = 671
Score = 406 bits (205), Expect = e-111
Identities = 370/425 (87%)
Strand = Plus / Plus
Query: 8 gactcggagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctc 67
||||| |||||||||||||||||||||||||| |||||||||||||| |||||| |||||
Sbjct: 72 gactccgagggcgccatcgacggccacctccgtgaggtggggctcacgttccacttgctc 131
Query: 68 aaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaag 127
|||||||||| |||||||||||||||||||| | ||| |||| || || || ||||||
Sbjct: 132 aaggacgtgcttgggctcatctccaagaacatagagcgctcgctagaggaggcattcaag 191
Query: 128 ccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgcc 187
||||| || ||| |||||| ||||||||||| ||||||||||||||||| ||||| ||
Sbjct: 192 ccgctggggatcaccgactacaactccatcttttgggtggcgcaccccggtgggccggcg 251
Query: 188 atcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgc 247
||||| |||||||||||||||||||||||||| | |||| |||||||||| || ||
Sbjct: 252 atcctggaccaggtggaggccaaggtcgggctaaagaaggagcggatgcgcgcgacgcga 311
Query: 248 cacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgag 307
|| ||||| |||||||||||||||||||| || |||||||| ||||||||||||||||||
Sbjct: 312 catgtcctgtccgagtacggcaacatgtctagtgcctgcgtgctcttcatcctcgacgag 371
Query: 308 atgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggc 367
|||||||| || ||||||||||| || ||||||||||| || || ||| | |||||||||
Sbjct: 372 atgcgcaaacgttccgccgaggagggccaggccaccaccggagaaggctttgactggggc 431
Query: 368 gtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtcccc 427
|||||||| ||||| ||||| || |||||||| ||||| || ||||||||||| ||||||
Sbjct: 432 gtcctctttggctttggccccgggctcaccgttgagactgttgtgctccacagggtcccc 491
Query: 428 atcac 432
|||||
Sbjct: 492 atcac 496
>gb|CN149370.1|CN149370 WOUND1_62_H04.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_62_H04_A002 3', mRNA sequence
Length = 736
Score = 404 bits (204), Expect = e-111
Identities = 330/372 (88%)
Strand = Plus / Plus
Query: 75 tgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctcg 134
||||||||||||||||||| ||||| | ||| ||||||| || |||||||||||||| |
Sbjct: 1 tgcccgggctcatctccaaaaacatagagcgctcgctggaggaggcgttcaagccgctgg 60
Query: 135 gcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctcg 194
| ||| |||||| |||||||| || |||||||||||||| |||||||| || ||||| |
Sbjct: 61 ggatcaccgactacaactccatattatgggtggcgcaccctggcgggccagcaatcctgg 120
Query: 195 accaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtcc 254
||||||||||||||||||||||||| || |||| ||||||| ||||| ||||| ||||
Sbjct: 121 accaggtggaggccaaggtcgggctagagaaggagcggatgcgtgccacgcgccatgtcc 180
Query: 255 tctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgca 314
| |||||||||||||||||||| || || ||||| |||||||||||||||||||||||||
Sbjct: 181 tgtccgagtacggcaacatgtctagtgcgtgcgtgctcttcatcctcgacgagatgcgca 240
Query: 315 agcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctct 374
| ||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| || |
Sbjct: 241 aacgctccgccgaggacggccaggcaaccaccggcgaaggcttcgactggggcgtgctat 300
Query: 375 tcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcacca 434
|||||||||| || || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcggcttcggtcctgggctcaccgtcgagaccgtcgtgctccacagcgtccccatcacca 360
Query: 435 ccggagcggcca 446
||||||||||||
Sbjct: 361 ccggagcggcca 372
Score = 69.9 bits (35), Expect = 3e-010
Identities = 44/46 (95%), Gaps = 2/46 (4%)
Strand = Plus / Plus
Query: 707 tggtgaggtattgggtatacctgtgtaagacaagcttggctggttt 752
||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 684 tggtgaggtattg--tatacctgtgtaagacaagcttggctggttt 727
>gb|BE356024.1|BE356024 DG1_121_B02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 448
Score = 396 bits (200), Expect = e-108
Identities = 335/380 (88%)
Strand = Plus / Plus
Query: 8 gactcggagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctc 67
||||| ||||||||||| || ||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 67 gactctgagggcgccattgatggccacctccgtgaggtcgggctcacgttccacctgctc 126
Query: 68 aaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaag 127
||||| || || |||||||||||||||||||||| ||| ||||||| || |||||||||
Sbjct: 127 aaggatgtccctgggctcatctccaagaacatcgagcgctcgctggaggaggcgttcaag 186
Query: 128 ccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgcc 187
||||| || ||| |||||| ||||||||||||||||||||||||||||| ||||| ||
Sbjct: 187 ccgctagggatcaccgactacaactccatcttctgggtggcgcaccccggtgggccagcg 246
Query: 188 atcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgc 247
||||| |||||||||||||||||||||||||| | |||| ||||||||||| || ||
Sbjct: 247 atcctggaccaggtggaggccaaggtcgggctaaagaaggagaggatgcgcgcgacgcga 306
Query: 248 cacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgag 307
|| ||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 307 catgtcctgtccgagtacggcaacatgtctagcgcctgcgtgctcttcatcctcgacgag 366
Query: 308 atgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggc 367
||||||||||||||||||||||| || ||||||||||| ||||| || | ||||||||
Sbjct: 367 atgcgcaagcgctccgccgaggatggccaggccaccaccggcgaaggttttgactggggt 426
Query: 368 gtcctcttcggcttcggccc 387
|||||||| ||||| |||||
Sbjct: 427 gtcctctttggctttggccc 446
>gb|CD233146.1|CD233146 SS1_12_D09.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_12_D09_A012 3', mRNA sequence
Length = 634
Score = 394 bits (199), Expect = e-108
Identities = 304/339 (89%)
Strand = Plus / Plus
Query: 108 cgctggacgacgcgttcaagccgctcggcatctccgactggaactccatcttctgggtgg 167
||||||| || |||||||||||||| || ||| |||||| |||||||||||||||||||
Sbjct: 19 cgctggaggaggcgttcaagccgctggggatcaccgactacaactccatcttctgggtgg 78
Query: 168 cgcaccccggcgggcccgccatcctcgaccaggtggaggccaaggtcgggctggacaagg 227
||||||| |||||||| || ||||| |||||||||||||||||||||||||| || ||||
Sbjct: 79 cgcaccctggcgggccagcaatcctggaccaggtggaggccaaggtcgggctagagaagg 138
Query: 228 ccaggatgcgcgccacccgccacgtcctctccgagtacggcaacatgtccagcgcctgcg 287
||||||| |||| ||||| ||||| |||||||||||||||||||| || || ||||
Sbjct: 139 agcggatgcgtgccatgcgccatgtcctgtccgagtacggcaacatgtctagtgcgtgcg 198
Query: 288 tcctcttcatcctcgacgagatgcgcaagcgctccgccgaggacggacaggccaccacgg 347
| |||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| |
Sbjct: 199 tgctcttcatcctcgacgagatgcgcaaacgctccgccgaggacggccaggcaaccaccg 258
Query: 348 gcgagggcctcgactggggcgtcctcttcggcttcggcccgggactcaccgtcgagaccg 407
|||| ||| ||||||||||||| |||||||||||||| || || ||||||||||||||||
Sbjct: 259 gcgaaggcttcgactggggcgtgctcttcggcttcggtcctgggctcaccgtcgagaccg 318
Query: 408 tcgtgctccacagcgtccccatcaccaccggagcggcca 446
|||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tcgtgctccacagcgtccccatcaccaccggagcggcca 357
>gb|BE362244.1|BE362244 DG1_85_H08.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 537
Score = 387 bits (195), Expect = e-105
Identities = 291/323 (90%)
Strand = Plus / Plus
Query: 1 cctgcccgactcggagggcgccatcgacggccacctccgcgaggtggggctcaccttcca 60
|||||| ||||| |||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 215 cctgccggactccgagggcgccatcgacggccacctccgcgaggtcgggctcacgttcca 274
Query: 61 cctgctcaaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgc 120
||||||||||||||||||||||||||||||||||||||| | ||| ||||||| || ||
Sbjct: 275 cctgctcaaggacgtgcccgggctcatctccaagaacatagagcgctcgctggaggaggc 334
Query: 121 gttcaagccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcgg 180
|||||||||||| || ||| |||||| |||||||||||||||||||||||||| |||||
Sbjct: 335 gttcaagccgctggggatcaccgactacaactccatcttctgggtggcgcaccctggcgg 394
Query: 181 gcccgccatcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgc 240
||| || || || ||||||||||||||||||||||||||||| |||| || |||| ||
Sbjct: 395 gccagcgattctggaccaggtggaggccaaggtcgggctggagaaggagcggctgcgtgc 454
Query: 241 cacccgccacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcct 300
||| ||||| ||||| || ||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 455 cacgcgccatgtcctatctgagtacggcaacatgtccagcgcgtgcgtgctcttcatcct 514
Query: 301 cgacgagatgcgcaagcgctccg 323
|||||||||||||||||||||||
Sbjct: 515 cgacgagatgcgcaagcgctccg 537
>gb|CN150411.1|CN150411 WOUND1_69_A12.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_69_A12_A002 3', mRNA sequence
Length = 747
Score = 387 bits (195), Expect = e-105
Identities = 303/339 (89%)
Strand = Plus / Plus
Query: 108 cgctggacgacgcgttcaagccgctcggcatctccgactggaactccatcttctgggtgg 167
||||||| || |||||||||||| | || ||| |||||| |||||||||||||||||||
Sbjct: 19 cgctggaggaggcgttcaagccgttggggatcaccgactacaactccatcttctgggtgg 78
Query: 168 cgcaccccggcgggcccgccatcctcgaccaggtggaggccaaggtcgggctggacaagg 227
||||||| |||||||| || ||||| |||||||||||||||||||||||||| || ||||
Sbjct: 79 cgcaccctggcgggccagcaatcctggaccaggtggaggccaaggtcgggctagagaagg 138
Query: 228 ccaggatgcgcgccacccgccacgtcctctccgagtacggcaacatgtccagcgcctgcg 287
||||||| ||||| ||||| ||||| |||||||||||||||||||| || || ||||
Sbjct: 139 agcggatgcgtgccacgcgccatgtcctgtccgagtacggcaacatgtctagtgcgtgcg 198
Query: 288 tcctcttcatcctcgacgagatgcgcaagcgctccgccgaggacggacaggccaccacgg 347
| |||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| |
Sbjct: 199 tgctcttcatcctcgacgagatgcgcaaacgctccgccgaggacggccaggcaaccaccg 258
Query: 348 gcgagggcctcgactggggcgtcctcttcggcttcggcccgggactcaccgtcgagaccg 407
|||| ||| ||||||||||||| |||||||||||||| || || |||||||| |||||||
Sbjct: 259 gcgaaggcttcgactggggcgtgctcttcggcttcggtcctgggctcaccgtggagaccg 318
Query: 408 tcgtgctccacagcgtccccatcaccaccggagcggcca 446
|||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tcgtgctccacagcgtccccatcaccaccggagcggcca 357
Score = 69.9 bits (35), Expect = 3e-010
Identities = 44/46 (95%), Gaps = 2/46 (4%)
Strand = Plus / Plus
Query: 707 tggtgaggtattgggtatacctgtgtaagacaagcttggctggttt 752
||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 669 tggtgaggtattg--tatacctgtgtaagacaagcttggctggttt 712
>gb|BE362275.1|BE362275 DG1_85_H08.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 333
Score = 385 bits (194), Expect = e-105
Identities = 290/322 (90%)
Strand = Plus / Plus
Query: 1 cctgcccgactcggagggcgccatcgacggccacctccgcgaggtggggctcaccttcca 60
|||||| ||||| |||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 12 cctgccggactccgagggcgccatcgacggccacctccgcgaggtcgggctcacgttcca 71
Query: 61 cctgctcaaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgc 120
||||||||||||||||||||||||||||||||||||||| | ||| ||||||| || ||
Sbjct: 72 cctgctcaaggacgtgcccgggctcatctccaagaacatagagcgctcgctggaggaggc 131
Query: 121 gttcaagccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcgg 180
|||||||||||| || ||| |||||| |||||||||||||||||||||||||| |||||
Sbjct: 132 gttcaagccgctggggatcaccgactacaactccatcttctgggtggcgcaccctggcgg 191
Query: 181 gcccgccatcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgc 240
||| || || || ||||||||||||||||||||||||||||| |||| || |||| ||
Sbjct: 192 gccagcgattctggaccaggtggaggccaaggtcgggctggagaaggagcggctgcgtgc 251
Query: 241 cacccgccacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcct 300
||| ||||| ||||| || ||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 252 cacgcgccatgtcctatctgagtacggcaacatgtccagcgcgtgcgtgctcttcatcct 311
Query: 301 cgacgagatgcgcaagcgctcc 322
||||||||||||||||||||||
Sbjct: 312 cgacgagatgcgcaagcgctcc 333
>gb|CD430674.1|CD430674 ETH1_20_C06.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_20_C06_A002 3', mRNA sequence
Length = 581
Score = 385 bits (194), Expect = e-105
Identities = 338/386 (87%)
Strand = Plus / Plus
Query: 47 gggctcaccttccacctgctcaaggacgtgcccgggctcatctccaagaacatcggccgc 106
|||||||| ||||||||||||||||||||||| |||||||||||||||||||| | |||
Sbjct: 2 gggctcacgttccacctgctcaaggacgtgcctgggctcatctccaagaacatagagcgc 61
Query: 107 gcgctggacgacgcgttcaagccgctcggcatctccgactggaactccatcttctgggtg 166
|||| || || || ||||||||||| || ||| |||||| ||||||||||| ||||||
Sbjct: 62 tcgctagaggaggcattcaagccgctggggatcaccgactacaactccatcttttgggtg 121
Query: 167 gcgcaccccggcgggcccgccatcctcgaccaggtggaggccaaggtcgggctggacaag 226
||||||||||| ||||| || ||||| |||||||||||||||||||||||||| | |||
Sbjct: 122 gcgcaccccggtgggccggcgatcctggaccaggtggaggccaaggtcgggctaaagaag 181
Query: 227 gccaggatgcgcgccacccgccacgtcctctccgagtacggcaacatgtccagcgcctgc 286
| |||||||||| || || || ||||| |||||||||||||||||||| || ||||||
Sbjct: 182 gagcggatgcgcgcgacgcgacatgtcctgtccgagtacggcaacatgtctagtgcctgc 241
Query: 287 gtcctcttcatcctcgacgagatgcgcaagcgctccgccgaggacggacaggccaccacg 346
|| |||||||||||||||||||||||||| |||||||||||||| || |||||||||||
Sbjct: 242 gtgctcttcatcctcgacgagatgcgcaaacgctccgccgaggagggccaggccaccacc 301
Query: 347 ggcgagggcctcgactggggcgtcctcttcggcttcggcccgggactcaccgtcgagacc 406
|| || ||| | ||||||||||||||||| ||||| ||||| || ||||||||||||||
Sbjct: 302 ggagaaggctttgactggggcgtcctctttggctttggccccgggctcaccgtcgagact 361
Query: 407 gtcgtgctccacagcgtccccatcac 432
|| |||||||||||||||||||||||
Sbjct: 362 gttgtgctccacagcgtccccatcac 387
>gb|CF428995.1|CF428995 PH1_19_C12.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_19_C12_A002 3', mRNA sequence
Length = 509
Score = 383 bits (193), Expect = e-104
Identities = 313/353 (88%)
Strand = Plus / Plus
Query: 90 ccaagaacatcggccgcgcgctggacgacgcgttcaagccgctcggcatctccgactgga 149
|||||||||||| ||| ||||||| || |||||||||||||| || ||| |||||| |
Sbjct: 1 ccaagaacatcgagcgctcgctggaggaggcgttcaagccgctagggatcaccgactaca 60
Query: 150 actccatcttctgggtggcgcaccccggcgggcccgccatcctcgaccaggtggaggcca 209
|||||||||| ||||||||||||||||| ||||| || ||||| ||||||||||||||||
Sbjct: 61 actccatcttgtgggtggcgcaccccggtgggccagcgatcctggaccaggtggaggcca 120
Query: 210 aggtcgggctggacaaggccaggatgcgcgccacccgccacgtcctctccgagtacggca 269
|||||||||| | |||| ||||||||||| || || || ||||| |||||||||||||
Sbjct: 121 aggtcgggctaaagaaggagaggatgcgcgcgacgcgacatgtcctgtccgagtacggca 180
Query: 270 acatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgcaagcgctccgccgagg 329
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acatgtctagcgcctgcgtgctcttcatcctcgacgagatgcgcaagcgctccgccgagg 240
Query: 330 acggacaggccaccacgggcgagggcctcgactggggcgtcctcttcggcttcggcccgg 389
| || ||||||||||| ||||| || | |||||||| |||||||| ||||| ||||| |
Sbjct: 241 atggccaggccaccaccggcgaaggttttgactggggtgtcctctttggctttggccccg 300
Query: 390 gactcaccgtcgagaccgtcgtgctccacagcgtccccatcaccaccggagcg 442
| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggctcaccgtcgagactgtcgtgctccacagcgtccccatcaccaccggagcg 353
>gb|CX609856.1|CX609856 ANR1_15_D09.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_15_D09_A002 3', mRNA sequence
Length = 738
Score = 381 bits (192), Expect = e-104
Identities = 288/320 (90%)
Strand = Plus / Plus
Query: 127 gccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgc 186
|||||| || ||| |||||| |||||||||||||||||||||||||| |||||||| ||
Sbjct: 1 gccgctggggatcaccgactacaactccatcttctgggtggcgcaccctggcgggccagc 60
Query: 187 catcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccg 246
||||| |||||||||||||||||||||||||| || |||| ||||||| ||||| ||
Sbjct: 61 aatcctggaccaggtggaggccaaggtcgggctagagaaggagcggatgcgtgccacgcg 120
Query: 247 ccacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacga 306
||| ||||| |||||||||||||||||||| || || ||||| |||||||||||||||||
Sbjct: 121 ccatgtcctgtccgagtacggcaacatgtctagtgcgtgcgtgctcttcatcctcgacga 180
Query: 307 gatgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactgggg 366
||||||||| ||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||
Sbjct: 181 gatgcgcaaacgctccgccgaggacggccaggcaaccaccggcgaaggcttcgactgggg 240
Query: 367 cgtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccc 426
||| |||||||||||||| || || |||||||||||||||||||||||||||||||||||
Sbjct: 241 cgtgctcttcggcttcggtcccgggctcaccgtcgagaccgtcgtgctccacagcgtccc 300
Query: 427 catcaccaccggagcggcca 446
||||||||||||||||||||
Sbjct: 301 catcaccaccggagcggcca 320
Score = 69.9 bits (35), Expect = 3e-010
Identities = 44/46 (95%), Gaps = 2/46 (4%)
Strand = Plus / Plus
Query: 707 tggtgaggtattgggtatacctgtgtaagacaagcttggctggttt 752
||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 632 tggtgaggtattg--tatacctgtgtaagacaagcttggctggttt 675
>gb|CX623185.1|CX623185 GABR1_68_E08.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_68_E08_A002 3', mRNA sequence
Length = 618
Score = 373 bits (188), Expect = e-101
Identities = 293/328 (89%)
Strand = Plus / Plus
Query: 119 gcgttcaagccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggc 178
|||||||||||||| || ||| |||||| ||||||||||| |||||||||||||| |||
Sbjct: 8 gcgttcaagccgctggggatcaccgactacaactccatcttttgggtggcgcaccctggc 67
Query: 179 gggcccgccatcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgc 238
||||| || ||||| |||||||||||||||||||||||||| || |||| |||||||
Sbjct: 68 gggccagcaatcctggaccaggtggaggccaaggtcgggctagagaaggagcggatgcgt 127
Query: 239 gccacccgccacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatc 298
||||| ||||| ||||| ||||||||||||||||||| || || ||||| |||||||||
Sbjct: 128 gccacgcgccatgtcctgtccgagtacggcaacatgtttagtgcgtgcgtgctcttcatc 187
Query: 299 ctcgacgagatgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctc 358
||||||||||||||||| ||||||||||||||||| ||||| ||||| ||||| ||| ||
Sbjct: 188 ctcgacgagatgcgcaaacgctccgccgaggacggccaggcaaccaccggcgaaggcttc 247
Query: 359 gactggggcgtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccac 418
||||||||||| |||||||||||||| || || |||||||||| ||||||||||||||||
Sbjct: 248 gactggggcgtgctcttcggcttcggtcctgggctcaccgtcgggaccgtcgtgctccac 307
Query: 419 agcgtccccatcaccaccggagcggcca 446
||||||||||||||||||||||||||||
Sbjct: 308 agcgtccccatcaccaccggagcggcca 335
>gb|CD462509.1|CD462509 ETH1_38_B05.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_38_B05_A002 3', mRNA sequence
Length = 585
Score = 369 bits (186), Expect = e-100
Identities = 345/398 (86%)
Strand = Plus / Plus
Query: 47 gggctcaccttccacctgctcaaggacgtgcccgggctcatctccaagaacatcggccgc 106
|||||||| || ||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 2 gggctcacgtttcacctgctcaagggcgtgcccgggctcatctccaagaacatcgagcgc 61
Query: 107 gcgctggacgacgcgttcaagccgctcggcatctccgactggaactccatcttctgggtg 166
|||||||| || || |||||||| || || || | |||| ||||||||||||||||||
Sbjct: 62 gcgctggaggaggcattcaagccactggggataactgactacaactccatcttctgggtg 121
Query: 167 gcgcaccccggcgggcccgccatcctcgaccaggtggaggccaaggtcgggctggacaag 226
||||||||||| ||||| || ||||| |||||||||||||||||||||||||| || ||
Sbjct: 122 gcgcaccccggtgggccggcgatcctggaccaggtggaggccaaggtcgggctagagaaa 181
Query: 227 gccaggatgcgcgccacccgccacgtcctctccgagtacggcaacatgtccagcgcctgc 286
| ||||||||||||| || || ||| | || ||||||||||||||||| ||||||||
Sbjct: 182 gagcggatgcgcgccacgcgtcatgtcttgtctgagtacggcaacatgtctagcgcctgt 241
Query: 287 gtcctcttcatcctcgacgagatgcgcaagcgctccgccgaggacggacaggccaccacg 346
|| |||||||||||||| |||||||||||||||||||||||||| || || ||||||||
Sbjct: 242 gtgctcttcatcctcgatgagatgcgcaagcgctccgccgaggatggccaaaccaccacg 301
Query: 347 ggcgagggcctcgactggggcgtcctcttcggcttcggcccgggactcaccgtcgagacc 406
||||| ||| | || |||||||| ||||| |||||||| || || |||||||| || |||
Sbjct: 302 ggcgaaggctttgattggggcgtactctttggcttcggtcccgggctcaccgttgaaacc 361
Query: 407 gtcgtgctccacagcgtccccatcaccaccggagcggc 444
||||||||||||||||||||||||||||| || |||||
Sbjct: 362 gtcgtgctccacagcgtccccatcaccactggcgcggc 399
>gb|CF431308.1|CF431308 NIT1_5_E11.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_5_E11_A002 3', mRNA sequence
Length = 485
Score = 365 bits (184), Expect = 4e-099
Identities = 289/324 (89%)
Strand = Plus / Plus
Query: 119 gcgttcaagccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggc 178
|||||||||||||| || ||| |||||| ||||||||||| |||||||||||||||||
Sbjct: 8 gcgttcaagccgctagggatcaccgactacaactccatcttttgggtggcgcaccccggt 67
Query: 179 gggcccgccatcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgc 238
||||| || ||||| |||||||||||||||||||||||||| | |||| |||||||||
Sbjct: 68 gggccagcgatcctggaccaggtggaggccaaggtcgggctaaagaaggagaggatgcgc 127
Query: 239 gccacccgccacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatc 298
|| || || || ||||| |||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 128 gcgacgcgacatgtcctgtccgagtacggcaacatgtctagcgcctgcgtgctcttcatc 187
Query: 299 ctcgacgagatgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctc 358
|||||||||||||||||||||||||||||||| || ||||||||||| ||||| || |
Sbjct: 188 ctcgacgagatgcgcaagcgctccgccgaggatggccaggccaccaccggcgaaggtttt 247
Query: 359 gactggggcgtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccac 418
|||||||| |||||||| ||||| ||||| || |||||||||||||| ||||||||||||
Sbjct: 248 gactggggtgtcctctttggctttggccccgggctcaccgtcgagactgtcgtgctccac 307
Query: 419 agcgtccccatcaccaccggagcg 442
||||||||||||||||||||||||
Sbjct: 308 agcgtccccatcaccaccggagcg 331
>gb|CX606271.1|CX606271 ANR1_2_C12.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_2_C12_A002 3', mRNA sequence
Length = 688
Score = 361 bits (182), Expect = 6e-098
Identities = 269/298 (90%)
Strand = Plus / Plus
Query: 149 aactccatcttctgggtggcgcaccccggcgggcccgccatcctcgaccaggtggaggcc 208
||||||||||| |||||||||||||| |||||||| || ||||| |||||||||||||||
Sbjct: 17 aactccatcttttgggtggcgcaccctggcgggccagcaatcctggaccaggtggaggcc 76
Query: 209 aaggtcgggctggacaaggccaggatgcgcgccacccgccacgtcctctccgagtacggc 268
| ||||||||| || |||| ||||||| ||||| ||||| ||||| ||||||||||||
Sbjct: 77 agggtcgggctagagaaggagcggatgcgtgccacgcgccatgtcctgtccgagtacggc 136
Query: 269 aacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgcaagcgctccgccgag 328
|||||||| || || ||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 137 aacatgtctagtgcgtgcgtgctcttcatcctcgacgagatgcgcaaacgctccgccgag 196
Query: 329 gacggacaggccaccacgggcgagggcctcgactggggcgtcctcttcggcttcggcccg 388
||||| ||||| ||||| ||||| ||| ||||||||||||| |||||||||||||| ||
Sbjct: 197 gacggccaggcaaccaccggcgaaggcttcgactggggcgtgctcttcggcttcggtcct 256
Query: 389 ggactcaccgtcgagaccgtcgtgctccacagcgtccccatcaccaccggagcggcca 446
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gggctcaccgtcgagaccgtcgtgctccacagcgtccccatcaccaccggagcggcca 314
Score = 69.9 bits (35), Expect = 3e-010
Identities = 44/46 (95%), Gaps = 2/46 (4%)
Strand = Plus / Plus
Query: 707 tggtgaggtattgggtatacctgtgtaagacaagcttggctggttt 752
||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 626 tggtgaggtattg--tatacctgtgtaagacaagcttggctggttt 669
>gb|AW565912.1|AW565912 LG1_353_E05.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 544
Score = 359 bits (181), Expect = 2e-097
Identities = 319/365 (87%)
Strand = Plus / Plus
Query: 74 gtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctc 133
|||||||||||||||||||||||||||| ||| || |||| || ||||||||||| ||
Sbjct: 1 gtgcccgggctcatctccaagaacatcgagcgctcgttggaggaggcgttcaagccacta 60
Query: 134 ggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctc 193
|| ||| |||||| ||||||||||| ||||||||||||||||| ||||| || |||||
Sbjct: 61 gggatcaccgactacaactccatcttttgggtggcgcaccccggtgggccagcaatcctg 120
Query: 194 gaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtc 253
|||||||||||||||||||||||||| | |||| | |||||||| || || || |||
Sbjct: 121 gaccaggtggaggccaaggtcgggctaaagaaggagcgaatgcgcgcgacgcgacatgtc 180
Query: 254 ctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgc 313
|| ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 181 ctgtccgaatacggcaacatgtctagcgcctgcgtgctcttcatcctcgacgagatgcgc 240
Query: 314 aagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctc 373
|||||||| |||||||| || ||||||||||| || || ||| | |||||||| ||||||
Sbjct: 241 aagcgctctgccgaggatggccaggccaccaccggtgaaggcttggactggggtgtcctc 300
Query: 374 ttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcacc 433
|||||||||||||| || |||||||| ||||||||||||||||| ||||||||||| |||
Sbjct: 301 ttcggcttcggccccgggctcaccgttgagaccgtcgtgctccatagcgtccccattacc 360
Query: 434 accgg 438
|||||
Sbjct: 361 accgg 365
>gb|CX606791.1|CX606791 ANR1_5_B02.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_5_B02_A002 3', mRNA sequence
Length = 676
Score = 351 bits (177), Expect = 6e-095
Identities = 258/285 (90%)
Strand = Plus / Plus
Query: 162 gggtggcgcaccccggcgggcccgccatcctcgaccaggtggaggccaaggtcgggctgg 221
||||||||||||| |||||||| || ||||| |||||||||||||||||||||||||| |
Sbjct: 1 gggtggcgcaccctggcgggccagcaatcctggaccaggtggaggccaaggtcgggctag 60
Query: 222 acaaggccaggatgcgcgccacccgccacgtcctctccgagtacggcaacatgtccagcg 281
| |||| ||||||| ||||| ||||| ||||| |||||||||||||||||||| || |
Sbjct: 61 agaaggagcggatgcgtgccacgcgccatgtcctgtccgagtacggcaacatgtctagtg 120
Query: 282 cctgcgtcctcttcatcctcgacgagatgcgcaagcgctccgccgaggacggacaggcca 341
| ||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||| |
Sbjct: 121 cgtgcgtgctcttcatcctcgacgagatgcgcaaacgctccgccgaggacggccaggcaa 180
Query: 342 ccacgggcgagggcctcgactggggcgtcctcttcggcttcggcccgggactcaccgtcg 401
|||| ||||| ||| ||||||||||||| |||||||||||||| || || ||||||||||
Sbjct: 181 ccaccggcgaaggcttcgactggggcgtgctcttcggcttcggtcctgggctcaccgtcg 240
Query: 402 agaccgtcgtgctccacagcgtccccatcaccaccggagcggcca 446
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agaccgtcgtgctccacagcgtccccatcaccaccggagcggcca 285
Score = 69.9 bits (35), Expect = 3e-010
Identities = 44/46 (95%), Gaps = 2/46 (4%)
Strand = Plus / Plus
Query: 707 tggtgaggtattgggtatacctgtgtaagacaagcttggctggttt 752
||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 597 tggtgaggtattg--tatacctgtgtaagacaagcttggctggttt 640
>gb|CX611210.1|CX611210 ANR1_23_F10.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_23_F10_A002 3', mRNA sequence
Length = 670
Score = 351 bits (177), Expect = 6e-095
Identities = 258/285 (90%)
Strand = Plus / Plus
Query: 162 gggtggcgcaccccggcgggcccgccatcctcgaccaggtggaggccaaggtcgggctgg 221
||||||||||||| |||||||| || ||||| |||||||||||||||||||||||||| |
Sbjct: 1 gggtggcgcaccctggcgggccagcaatcctggaccaggtggaggccaaggtcgggctag 60
Query: 222 acaaggccaggatgcgcgccacccgccacgtcctctccgagtacggcaacatgtccagcg 281
| |||| ||||||| ||||| ||||| ||||| |||||||||||||||||||| || |
Sbjct: 61 agaaggagcggatgcgtgccacgcgccatgtcctgtccgagtacggcaacatgtctagtg 120
Query: 282 cctgcgtcctcttcatcctcgacgagatgcgcaagcgctccgccgaggacggacaggcca 341
| ||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||| |
Sbjct: 121 cgtgcgtgctcttcatcctcgacgagatgcgcaaacgctccgccgaggacggccaggcaa 180
Query: 342 ccacgggcgagggcctcgactggggcgtcctcttcggcttcggcccgggactcaccgtcg 401
|||| ||||| ||| ||||||||||||| |||||||||||||| || || ||||||||||
Sbjct: 181 ccaccggcgaaggcttcgactggggcgtgctcttcggcttcggtcctgggctcaccgtcg 240
Query: 402 agaccgtcgtgctccacagcgtccccatcaccaccggagcggcca 446
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agaccgtcgtgctccacagcgtccccatcaccaccggagcggcca 285
Score = 69.9 bits (35), Expect = 3e-010
Identities = 44/46 (95%), Gaps = 2/46 (4%)
Strand = Plus / Plus
Query: 707 tggtgaggtattgggtatacctgtgtaagacaagcttggctggttt 752
||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 597 tggtgaggtattg--tatacctgtgtaagacaagcttggctggttt 640
>gb|CX618220.1|CX618220 GABR1_38_H01.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_38_H01_A002 3', mRNA sequence
Length = 656
Score = 335 bits (169), Expect = 4e-090
Identities = 250/277 (90%)
Strand = Plus / Plus
Query: 170 caccccggcgggcccgccatcctcgaccaggtggaggccaaggtcgggctggacaaggcc 229
||||| |||||||| || ||||| |||||||||||||||||||||||||| || ||||
Sbjct: 1 caccctggcgggccagcaatcctggaccaggtggaggccaaggtcgggctagagaaggag 60
Query: 230 aggatgcgcgccacccgccacgtcctctccgagtacggcaacatgtccagcgcctgcgtc 289
||||||| ||||| ||||| ||||| |||||||||||||||||||| || || |||||
Sbjct: 61 cggatgcgtgccacgcgccatgtcctgtccgagtacggcaacatgtctagtgcgtgcgtg 120
Query: 290 ctcttcatcctcgacgagatgcgcaagcgctccgccgaggacggacaggccaccacgggc 349
|||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| |||
Sbjct: 121 ctcttcatcctcgacgagatgcgcaaacgctccgccgaggacggccaggcaaccaccggc 180
Query: 350 gagggcctcgactggggcgtcctcttcggcttcggcccgggactcaccgtcgagaccgtc 409
|| ||| ||||||||||||| |||||||||||||| || || ||||||||||||||||||
Sbjct: 181 gaaggcttcgactggggcgtgctcttcggcttcggtcctgggctcaccgtcgagaccgtc 240
Query: 410 gtgctccacagcgtccccatcaccaccggagcggcca 446
|||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtgctccacagcgtccccatcaccaccggagcggcca 277
Score = 69.9 bits (35), Expect = 3e-010
Identities = 44/46 (95%), Gaps = 2/46 (4%)
Strand = Plus / Plus
Query: 707 tggtgaggtattgggtatacctgtgtaagacaagcttggctggttt 752
||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 589 tggtgaggtattg--tatacctgtgtaagacaagcttggctggttt 632
>gb|AW565339.1|AW565339 LG1_342_D02.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 660
Score = 331 bits (167), Expect = 6e-089
Identities = 245/271 (90%)
Strand = Plus / Plus
Query: 176 ggcgggcccgccatcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatg 235
|||||||| || ||||| |||||||||||||||||||||||||| || |||| |||||
Sbjct: 4 ggcgggccagcaatcctggaccaggtggaggccaaggtcgggctagagaaggagcggatg 63
Query: 236 cgcgccacccgccacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttc 295
|| ||||| ||||| ||||| |||||||||||||||||||| || || ||||| ||||||
Sbjct: 64 cgtgccacgcgccatgtcctgtccgagtacggcaacatgtctagtgcgtgcgtgctcttc 123
Query: 296 atcctcgacgagatgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggc 355
|||||||||||||||||||| ||||||||||||||||| ||||| ||||| ||||| |||
Sbjct: 124 atcctcgacgagatgcgcaaacgctccgccgaggacggccaggcaaccaccggcgaaggc 183
Query: 356 ctcgactggggcgtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctc 415
||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||
Sbjct: 184 ttcgactggggcgtgctcttcggcttcggtcctgggctcaccgtcgagaccgtcgtgctc 243
Query: 416 cacagcgtccccatcaccaccggagcggcca 446
|||||||||||||||||||||||||||||||
Sbjct: 244 cacagcgtccccatcaccaccggagcggcca 274
Score = 69.9 bits (35), Expect = 3e-010
Identities = 44/46 (95%), Gaps = 2/46 (4%)
Strand = Plus / Plus
Query: 707 tggtgaggtattgggtatacctgtgtaagacaagcttggctggttt 752
||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 586 tggtgaggtattg--tatacctgtgtaagacaagcttggctggttt 629
>gb|BG559905.1|BG559905 RHIZ2_75_B04.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 535
Score = 327 bits (165), Expect = 9e-088
Identities = 231/253 (91%)
Strand = Plus / Plus
Query: 194 gaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtc 253
|||||||| |||||||||||||||||||| |||| ||||||| ||||| ||||| |||
Sbjct: 1 gaccaggtagaggccaaggtcgggctggagaaggagcggatgcgtgccacgcgccatgtc 60
Query: 254 ctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgc 313
|| ||||||||||| || ||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 61 ctgtccgagtacggtaatatgtccagcgcgtgcgtgctcttcatcctcgacgagatgcgc 120
Query: 314 aagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctc 373
|||||||||||||||||||| ||||||||||| || || ||| ||||||||||||| |||
Sbjct: 121 aagcgctccgccgaggacggccaggccaccaccggtgaaggcttcgactggggcgtgctc 180
Query: 374 ttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcacc 433
||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttcggcttcggtcccgggctcaccgtcgagaccgtcgtgctccacagcgtccccatcacc 240
Query: 434 accggagcggcca 446
|||||||||||||
Sbjct: 241 accggagcggcca 253
>gb|CN133901.1|CN133901 OX1_19_B11.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_19_B11_A002 3', mRNA sequence
Length = 530
Score = 309 bits (156), Expect = 2e-082
Identities = 272/311 (87%)
Strand = Plus / Plus
Query: 122 ttcaagccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcggg 181
||||||||||| || ||| | |||| ||||||||||| ||||||||||||||||| |||
Sbjct: 33 ttcaagccgctggggatcacngactacaactccatcttttgggtggcgcaccccggtggg 92
Query: 182 cccgccatcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgcc 241
|| || ||||| |||||||||||||||||||||||||| | |||| ||||||||||
Sbjct: 93 ccggcgatcctggaccaggtggaggccaaggtcgggctaaagaaggagcggatgcgcgcg 152
Query: 242 acccgccacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctc 301
|| || || ||||| |||||||||||||||||||| || |||||||| ||||||||||||
Sbjct: 153 acgcgacatgtcctgtccgagtacggcaacatgtctagtgcctgcgtgctcttcatcctc 212
Query: 302 gacgagatgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgac 361
|||||||||||||| |||||||||||||| || ||||||||||| || || ||| | |||
Sbjct: 213 gacgagatgcgcaaacgctccgccgaggagggccaggccaccaccggagaaggctttgac 272
Query: 362 tggggcgtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagc 421
|||||||||||||| ||||| ||||| || |||||||||||||| || ||||||||||||
Sbjct: 273 tggggcgtcctctttggctttggccccgggctcaccgtcgagactgttgtgctccacagc 332
Query: 422 gtccccatcac 432
|||||||||||
Sbjct: 333 gtccccatcac 343
>gb|U51569.1|SBU51569 Sorghum bicolor chalcone synthase (CHS) gene, allele 2G, exon 2,
partial cds
Length = 620
Score = 309 bits (156), Expect = 2e-082
Identities = 255/288 (88%)
Strand = Plus / Plus
Query: 1 cctgcccgactcggagggcgccatcgacggccacctccgcgaggtggggctcaccttcca 60
|||||| ||||| ||||| |||||||||||||||||||| ||||| |||||||| |||||
Sbjct: 333 cctgccggactccgagggagccatcgacggccacctccgtgaggtcgggctcacgttcca 392
Query: 61 cctgctcaaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgc 120
|||||||||||||||||||||||||||||| ||||||| | |||||| |||||| ||
Sbjct: 393 cctgctcaaggacgtgcccgggctcatctcaaagaacaaagagcgcgcggcggacgaggc 452
Query: 121 gttcaagccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcgg 180
|||||||||| ||| |||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 453 gttcaagccgtggggcttctccgactggaactccatcttctgggtggcgaaccctggcgg 512
Query: 181 gcccgccatcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgc 240
||| |||||||| | || || || ||||||||||||| ||||||||| ||||||||| ||
Sbjct: 513 gccagccatcctggcccgggggggggccaaggtcgggttggacaaggacaggatgcgtgc 572
Query: 241 cacccgccacgtcctctccgagtacggcaacatgtccagcgcctgcgt 288
||||||||||||||| ||||||||||| |||||||| ||||| |||||
Sbjct: 573 cacccgccacgtcctgtccgagtacggaaacatgtcgagcgcgtgcgt 620
>gb|CF432638.1|CF432638 NIT1_18_E06.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_18_E06_A002 3', mRNA sequence
Length = 537
Score = 307 bits (155), Expect = 8e-082
Identities = 305/355 (85%)
Strand = Plus / Plus
Query: 90 ccaagaacatcggccgcgcgctggacgacgcgttcaagccgctcggcatctccgactgga 149
|||||||||||| ||||||||||| || || |||||||| || || || | |||| |
Sbjct: 1 ccaagaacatcgagcgcgcgctggaggaggcattcaagccactggggataactgactaca 60
Query: 150 actccatcttctgggtggcgcaccccggcgggcccgccatcctcgaccaggtggaggcca 209
|||||||||||||||||||||||||||| ||||| || ||||| ||||||||||||||||
Sbjct: 61 actccatcttctgggtggcgcaccccggtgggccggcgatcctggaccaggtggaggcca 120
Query: 210 aggtcgggctggacaaggccaggatgcgcgccacccgccacgtcctctccgagtacggca 269
|||||||||| || || | ||||||||||||| || || ||| | || ||||||||||
Sbjct: 121 aggtcgggctagagaaagagcggatgcgcgccacgcgtcatgtcttgtctgagtacggca 180
Query: 270 acatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgcaagcgctccgccgagg 329
||||||| |||||||| || |||||||||||||| |||||||||||||||||||||||||
Sbjct: 181 acatgtctagcgcctgtgtgctcttcatcctcgatgagatgcgcaagcgctccgccgagg 240
Query: 330 acggacaggccaccacgggcgagggcctcgactggggcgtcctcttcggcttcggcccgg 389
| || || ||||||||||||| ||| | || |||||||| ||||| |||||||| || |
Sbjct: 241 atggccaaaccaccacgggcgaaggctttgattggggcgtactctttggcttcggtcccg 300
Query: 390 gactcaccgtcgagaccgtcgtgctccacagcgtccccatcaccaccggagcggc 444
| |||||||| || |||||||||||||||||||||||||||||||| || |||||
Sbjct: 301 ggctcaccgttgaaaccgtcgtgctccacagcgtccccatcaccactggcgcggc 355
>gb|CX621311.1|CX621311 GABR1_57_H07.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_57_H07_A002 3', mRNA sequence
Length = 540
Score = 307 bits (155), Expect = 8e-082
Identities = 233/259 (89%)
Strand = Plus / Plus
Query: 188 atcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgc 247
||||| |||||||||||||||| ||||||||| || |||| ||||||| |||| |||
Sbjct: 2 atcctggaccaggtggaggccatggtcgggctagagaaggagcggatgcgttccacgcgc 61
Query: 248 cacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgag 307
|| ||||| |||||||||||||||||||| || || ||||| ||||||||||||||||||
Sbjct: 62 catgtcctgtccgagtacggcaacatgtctagtgcgtgcgtgctcttcatcctcgacgag 121
Query: 308 atgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggc 367
|||||||| ||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||
Sbjct: 122 atgcgcaaacgctccgccgaggacggccaggcaaccaccggcgaaggcttcgactggggc 181
Query: 368 gtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtcccc 427
|| |||||||||||||| || || ||||||||||||||||||||||||||||||||||||
Sbjct: 182 gtgctcttcggcttcggtcctgggctcaccgtcgagaccgtcgtgctccacagcgtcccc 241
Query: 428 atcaccaccggagcggcca 446
|||||||||||||||||||
Sbjct: 242 atcaccaccggagcggcca 260
>gb|BE359724.1|BE359724 DG1_56_G02.g2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 323
Score = 297 bits (150), Expect = 8e-079
Identities = 279/322 (86%)
Strand = Plus / Plus
Query: 48 ggctcaccttccacctgctcaaggacgtgcccgggctcatctccaagaacatcggccgcg 107
||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 ggctcacgtttcacctgctcaaggacgtgcccgggctcatctccaagaacatcgagcgcg 60
Query: 108 cgctggacgacgcgttcaagccgctcggcatctccgactggaactccatcttctgggtgg 167
||||||| || || |||||||| || || || | |||| |||||||||||||||||||
Sbjct: 61 cgctggaggaggcattcaagccactggggataactgactacaactccatcttctgggtgg 120
Query: 168 cgcaccccggcgggcccgccatcctcgaccaggtggaggccaaggtcgggctggacaagg 227
|||||||||| ||||| || ||||| |||||||||||||||||||||||||| || || |
Sbjct: 121 cgcaccccggtgggccggcgatcctggaccaggtggaggccaaggtcgggctagagaaag 180
Query: 228 ccaggatgcgcgccacccgccacgtcctctccgagtacggcaacatgtccagcgcctgcg 287
||||||||||||| || || ||| | || ||||||||||||||||| |||||||| |
Sbjct: 181 agcggatgcgcgccacgcgtcatgtcttgtctgagtacggcaacatgtctagcgcctgtg 240
Query: 288 tcctcttcatcctcgacgagatgcgcaagcgctccgccgaggacggacaggccaccacgg 347
| |||||||||||||| |||||||||||||||||||||||||| || || |||||||||
Sbjct: 241 tgctcttcatcctcgatgagatgcgcaagcgctccgccgaggatggccaaaccaccacgg 300
Query: 348 gcgagggcctcgactggggcgt 369
|||| ||| | || ||||||||
Sbjct: 301 gcgaaggctttgattggggcgt 322
>gb|AW284288.2|AW284288 LG1_269_B01.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 406
Score = 293 bits (148), Expect = 1e-077
Identities = 220/244 (90%)
Strand = Plus / Plus
Query: 199 ggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtcctctc 258
|||||||||||||||||||||||| |||| | |||||||| || || || || |||||
Sbjct: 1 ggtggaggccaaggtcgggctggagaaggagcgaatgcgcgctacgcgacatgttctctc 60
Query: 259 cgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgcaagcg 318
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 61 tgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgtaagcg 120
Query: 319 ctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctcttcgg 378
|||||||||||| || | ||||||||| ||||| ||| ||||||||||||||||||| ||
Sbjct: 121 ctccgccgaggatggccgggccaccaccggcgaaggcttcgactggggcgtcctctttgg 180
Query: 379 cttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcaccaccgg 438
||| ||||| || ||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 181 ctttggccccgggctcaccgtcgagaccgtcgtgctccacagtgttcccatcaccaccgg 240
Query: 439 agcg 442
||||
Sbjct: 241 agcg 244
>gb|CD431531.1|CD431531 ETH1_9_E07.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_9_E07_A002 3', mRNA sequence
Length = 544
Score = 293 bits (148), Expect = 1e-077
Identities = 307/360 (85%)
Strand = Plus / Plus
Query: 85 catctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctcggcatctccga 144
||||||||||||||||| ||||||||||| || || |||||||| || || || | ||
Sbjct: 1 catctccaagaacatcgagcgcgcgctggaggaggcattcaagccactggggataactga 60
Query: 145 ctggaactccatcttctgggtggcgcaccccggcgggcccgccatcctcgaccaggtgga 204
|| ||||||||||||||||||||||||||||| ||||| || ||||| |||||||||||
Sbjct: 61 ctacaactccatcttctgggtggcgcaccccggtgggccggcgatcctggaccaggtgga 120
Query: 205 ggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtcctctccgagta 264
||||||||||||||| || || | ||||||||||||| || || || | | |||||
Sbjct: 121 ggccaaggtcgggctagagaaagagcggatgcgcgccacgcgtcatgttttgtttgagta 180
Query: 265 cggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgcaagcgctccgc 324
|||||||||||| |||||||| || |||||||||||||| ||||||||||||||||||||
Sbjct: 181 cggcaacatgtctagcgcctgtgtgctcttcatcctcgatgagatgcgcaagcgctccgc 240
Query: 325 cgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctcttcggcttcgg 384
|||||| || || ||||||||||||| ||| | || |||||||| ||||| ||||||||
Sbjct: 241 cgaggatggccaaaccaccacgggcgaaggctttgattggggcgtactctttggcttcgg 300
Query: 385 cccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcaccaccggagcggc 444
|| || |||||||| || ||||| |||||||||||||||||||||||||| || |||||
Sbjct: 301 tcccgggctcaccgttgaaaccgttgtgctccacagcgtccccatcaccactggcgcggc 360
>gb|CN137838.1|CN137838 OX1_60_B02.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_60_B02_A002 3', mRNA sequence
Length = 472
Score = 293 bits (148), Expect = 1e-077
Identities = 223/248 (89%)
Strand = Plus / Plus
Query: 199 ggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtcctctc 258
||||||||||||||||||||| || |||| ||||||| ||||| ||||| ||||| ||
Sbjct: 1 ggtggaggccaaggtcgggctagagaaggagcggatgcgtgccacgcgccatgtcctgtc 60
Query: 259 cgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgcaagcg 318
||||||||||||||||| || || ||||| |||||||||||||||||||||||||| ||
Sbjct: 61 tgagtacggcaacatgtctagtgcgtgcgtgctcttcatcctcgacgagatgcgcaaacg 120
Query: 319 ctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctcttcgg 378
||||||||||||||| ||||| ||||| || || ||| ||||||||||||| ||||||||
Sbjct: 121 ctccgccgaggacggccaggcaaccaccggggaaggcttcgactggggcgtgctcttcgg 180
Query: 379 cttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcaccaccgg 438
|||||| || || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cttcggtcctgggctcaccgtcgagaccgtcgtgctccacagcgtccccatcaccaccgg 240
Query: 439 agcggcca 446
||||||||
Sbjct: 241 agcggcca 248
>gb|BE361236.1|BE361236 DG1_70_C01.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 512
Score = 285 bits (144), Expect = 3e-075
Identities = 198/216 (91%)
Strand = Plus / Plus
Query: 231 ggatgcgcgccacccgccacgtcctctccgagtacggcaacatgtccagcgcctgcgtcc 290
||||||| ||||| ||||| ||||| |||||||||||||||||||| || || ||||| |
Sbjct: 7 ggatgcgtgccacgcgccatgtcctgtccgagtacggcaacatgtctagtgcgtgcgtgc 66
Query: 291 tcttcatcctcgacgagatgcgcaagcgctccgccgaggacggacaggccaccacgggcg 350
||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| ||||
Sbjct: 67 tcttcatcctcgacgagatgcgcaaacgctccgccgaggacggccaggcaaccaccggcg 126
Query: 351 agggcctcgactggggcgtcctcttcggcttcggcccgggactcaccgtcgagaccgtcg 410
| ||| ||||||||||||| |||||||||||||| || || |||||||||||||||||||
Sbjct: 127 aaggcttcgactggggcgtgctcttcggcttcggtcctgggctcaccgtcgagaccgtcg 186
Query: 411 tgctccacagcgtccccatcaccaccggagcggcca 446
||||||||||||||||||||||||||||||||||||
Sbjct: 187 tgctccacagcgtccccatcaccaccggagcggcca 222
>gb|CX612383.1|CX612383 GABR1_2_D08.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_2_D08_A002 3', mRNA sequence
Length = 559
Score = 270 bits (136), Expect = 2e-070
Identities = 235/268 (87%)
Strand = Plus / Plus
Query: 179 gggcccgccatcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgc 238
||||| || ||||| |||||||||||||||||||||||||| || |||| |||||||
Sbjct: 1 gggccagcaatcctggaccaggtggaggccaaggtcgggctagagaaggagcggatgcgt 60
Query: 239 gccacccgccacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatc 298
||||| ||||| ||||| ||||||||||||||||||| || || ||||| || ||||||
Sbjct: 61 gccacgcgccatgtcctgtccgagtacggcaacatgtttagggcgtgcgtgcttttcatc 120
Query: 299 ctcgacgagatgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctc 358
||||||||||||||||| || |||||||||||||| ||||| ||||| || || ||| ||
Sbjct: 121 ctcgacgagatgcgcaaacgttccgccgaggacggccaggcaaccaccggggaaggcttc 180
Query: 359 gactggggcgtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccac 418
||||||||||| || ||||||||||| || || ||||||||||||||||||||| |||||
Sbjct: 181 gactggggcgtgcttttcggcttcggtcctgggctcaccgtcgagaccgtcgtgttccac 240
Query: 419 agcgtccccatcaccaccggagcggcca 446
|| |||||||||||||||||||||||||
Sbjct: 241 agggtccccatcaccaccggagcggcca 268
>gb|CF428002.1|CF428002 PH1_12_E10.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_12_E10_A002 3', mRNA sequence
Length = 479
Score = 254 bits (128), Expect = 1e-065
Identities = 173/188 (92%)
Strand = Plus / Plus
Query: 259 cgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgcaagcg 318
|||||||||||||||||| || || ||||| |||||||||||||||||||||||||| ||
Sbjct: 1 cgagtacggcaacatgtctagtgcgtgcgtgctcttcatcctcgacgagatgcgcaaacg 60
Query: 319 ctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctcttcgg 378
||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| ||||||||
Sbjct: 61 ctccgccgaggacggccaggcaaccaccggcgaaggcttcgactggggcgtgctcttcgg 120
Query: 379 cttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcaccaccgg 438
|||||| || || ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 121 cttcggtcctgggctcaccgtcgagaccgtcgtgctccacagcgtccccatccccaccgg 180
Query: 439 agcggcca 446
||||||||
Sbjct: 181 agcggcca 188
>gb|BE361141.1|BE361141 DG1_70_C01.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 457
Score = 250 bits (126), Expect = 2e-064
Identities = 192/214 (89%)
Strand = Plus / Plus
Query: 1 cctgcccgactcggagggcgccatcgacggccacctccgcgaggtggggctcaccttcca 60
|||||| ||||| |||||||||||||||||||||||||| ||||| |||||||| |||||
Sbjct: 244 cctgccggactccgagggcgccatcgacggccacctccgtgaggtcgggctcacgttcca 303
Query: 61 cctgctcaaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgc 120
||||||||||||||||||||||||||||||||| ||||| ||| ||||||| || ||
Sbjct: 304 cctgctcaaggacgtgcccgggctcatctccaaaaacatatagcgctcgctggaggaggc 363
Query: 121 gttcaagccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcgg 180
|||||||||||| || ||| |||||| |||||||||||||||||||||||||| |||||
Sbjct: 364 gttcaagccgctggggatcaccgactacaactccatcttctgggtggcgcaccctggcgg 423
Query: 181 gcccgccatcctcgaccaggtggaggccaaggtc 214
||| || ||||| |||||||||||||||||||||
Sbjct: 424 gccagcaatcctggaccaggtggaggccaaggtc 457
>gb|CF431883.1|CF431883 NIT1_11_E04.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_11_E04_A002 3', mRNA sequence
Length = 434
Score = 228 bits (115), Expect = 6e-058
Identities = 151/163 (92%)
Strand = Plus / Plus
Query: 284 tgcgtcctcttcatcctcgacgagatgcgcaagcgctccgccgaggacggacaggccacc 343
||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||| |||
Sbjct: 7 tgcgtgctcttcatcctcgacgagatgcgcaaacgctccgccgaggacggtcaggcaacc 66
Query: 344 acgggcgagggcctcgactggggcgtcctcttcggcttcggcccgggactcaccgtcgag 403
|| ||||| ||| ||||||||||||| |||||||||||||| || || ||||||||||||
Sbjct: 67 accggcgaaggcttcgactggggcgtgctcttcggcttcggtcctgggctcaccgtcgag 126
Query: 404 accgtcgtgctccacagcgtccccatcaccaccggagcggcca 446
||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 127 accgtcgtgctccacagggtccccatcaccaccggagcggcca 169
>gb|CW378899.1|CW378899 fsbb001f057o03k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f057o03, DNA
sequence
Length = 486
Score = 210 bits (106), Expect = 1e-052
Identities = 292/354 (82%)
Strand = Plus / Minus
Query: 82 gctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctcggcatctc 141
||||||||||| |||||| | ||| |||||| ||||| ||| ||||| ||||||||
Sbjct: 408 gctcatctccatgaacattgagcgcttgctggaagacgctttcgcaccgcttggcatctc 349
Query: 142 cgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctcgaccaggt 201
||| |||||||||||||| |||||||||||||| ||||| || ||||| || || |||
Sbjct: 348 cgattggaactccatcttttgggtggcgcaccctggcggtccagccatactgaacatggt 289
Query: 202 ggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtcctctccga 261
|||||| ||||| || || ||||||||||| ||| | |||||||||||| |||| | ||
Sbjct: 288 ggaggctaaggttggccttgacaaggccagaatgtgtgccacccgccacatcctggcaga 229
Query: 262 gtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgcaagcgctc 321
||| ||||||||||| |||| || |||||||||||||| || |||||||| || | ||
Sbjct: 228 gtatggcaacatgtcaagcgtttgtgtcctcttcatccttgatgagatgcgaaacaggtc 169
Query: 322 cgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctcttcggctt 381
||| |||||||||| |||| || || ||||| | || ||||| ||||||||||||||
Sbjct: 168 tgccaaggacggacacaccacaactggggagggtatggagtggggtgtcctcttcggctt 109
Query: 382 cggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcaccac 435
|||||| || ||||||||||||||| |||| || |||||||| |||||||||||
Sbjct: 108 cggccccggcctcaccgtcgagaccatcgttcttcacagcgttcccatcaccac 55
Score = 65.9 bits (33), Expect = 5e-009
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 20 gccatcgacggccacctccgcgaggtggggctcaccttcca 60
|||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 470 gccatcgagggccacctccgtgaggtggggctcaccttcca 430
>gb|CW419724.1|CW419724 fsbb001f124l09f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f124l09, DNA
sequence
Length = 648
Score = 210 bits (106), Expect = 1e-052
Identities = 292/354 (82%)
Strand = Plus / Plus
Query: 82 gctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctcggcatctc 141
||||||||||| |||||| | ||| |||||| ||||| ||| ||||| ||||||||
Sbjct: 138 gctcatctccatgaacattgagcgcttgctggaagacgctttcgcaccgcttggcatctc 197
Query: 142 cgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctcgaccaggt 201
||| |||||||||||||| |||||||||||||| ||||| || ||||| || || |||
Sbjct: 198 cgattggaactccatcttttgggtggcgcaccctggcggtccagccatactgaacatggt 257
Query: 202 ggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtcctctccga 261
|||||| ||||| || || ||||||||||| ||| | |||||||||||| |||| | ||
Sbjct: 258 ggaggctaaggttggccttgacaaggccagaatgtgtgccacccgccacatcctggcaga 317
Query: 262 gtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgcaagcgctc 321
||| ||||||||||| |||| || |||||||||||||| || |||||||| || | ||
Sbjct: 318 gtatggcaacatgtcaagcgtttgtgtcctcttcatccttgatgagatgcgaaacaggtc 377
Query: 322 cgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctcttcggctt 381
||| |||||||||| |||| || || ||||| | || ||||| ||||||||||||||
Sbjct: 378 tgccaaggacggacacaccacaactggggagggtatggagtggggtgtcctcttcggctt 437
Query: 382 cggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcaccac 435
|||||| || ||||||||||||||| |||| || |||||||| |||||||||||
Sbjct: 438 cggccccggcctcaccgtcgagaccatcgttcttcacagcgttcccatcaccac 491
Score = 73.8 bits (37), Expect = 2e-011
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 8 gactcggagggcgccatcgacggccacctccgcgaggtggggctcaccttcca 60
||||| ||||| |||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 64 gactcagagggtgccatcgagggccacctccgtgaggtggggctcaccttcca 116
>gb|BE597283.1|BE597283 PI1_70_D03.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 539
Score = 210 bits (106), Expect = 1e-052
Identities = 292/354 (82%)
Strand = Plus / Plus
Query: 82 gctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctcggcatctc 141
||||||||||| |||||| | ||| |||||| ||||| ||| ||||| ||||||||
Sbjct: 75 gctcatctccatgaacattgagcgcttgctggaagacgctttcgcaccgcttggcatctc 134
Query: 142 cgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctcgaccaggt 201
||| |||||||||||||| |||||||||||||| ||||| || ||||| || || |||
Sbjct: 135 cgattggaactccatcttttgggtggcgcaccctggcggtccagccatactgaacatggt 194
Query: 202 ggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtcctctccga 261
|||||| ||||| || || ||||||||||| ||| | |||||||||||| |||| | ||
Sbjct: 195 ggaggctaaggttggccttgacaaggccagaatgtgtgccacccgccacatcctggcaga 254
Query: 262 gtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgcaagcgctc 321
||| ||||||||||| |||| || |||||||||||||| || |||||||| || | ||
Sbjct: 255 gtatggcaacatgtcaagcgtttgtgtcctcttcatccttgatgagatgcgaaacaggtc 314
Query: 322 cgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctcttcggctt 381
||| |||||||||| |||| || || ||||| | || ||||| ||||||||||||||
Sbjct: 315 tgccaaggacggacacaccacaactggggagggtatggagtggggtgtcctcttcggctt 374
Query: 382 cggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcaccac 435
|||||| || ||||||||||||||| |||| || |||||||| |||||||||||
Sbjct: 375 cggccccggcctcaccgtcgagaccatcgttcttcacagcgttcccatcaccac 428
Score = 73.8 bits (37), Expect = 2e-011
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 8 gactcggagggcgccatcgacggccacctccgcgaggtggggctcaccttcca 60
||||| ||||| |||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 1 gactcagagggtgccatcgagggccacctccgtgaggtggggctcaccttcca 53
>gb|BE597962.1|BE597962 PI1_67_F08.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 617
Score = 210 bits (106), Expect = 1e-052
Identities = 292/354 (82%)
Strand = Plus / Plus
Query: 82 gctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctcggcatctc 141
||||||||||| |||||| | ||| |||||| ||||| ||| ||||| ||||||||
Sbjct: 45 gctcatctccatgaacattgagcgcttgctggaagacgctttcgcaccgcttggcatctc 104
Query: 142 cgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctcgaccaggt 201
||| |||||||||||||| |||||||||||||| ||||| || ||||| || || |||
Sbjct: 105 cgattggaactccatcttttgggtggcgcaccctggcggtccagccatactgaacatggt 164
Query: 202 ggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtcctctccga 261
|||||| ||||| || || ||||||||||| ||| | |||||||||||| |||| | ||
Sbjct: 165 ggaggctaaggttggccttgacaaggccagaatgtgtgccacccgccacatcctggcaga 224
Query: 262 gtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgcaagcgctc 321
||| ||||||||||| |||| || |||||||||||||| || |||||||| || | ||
Sbjct: 225 gtatggcaacatgtcaagcgtttgtgtcctcttcatccttgatgagatgcgaaacaggtc 284
Query: 322 cgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctcttcggctt 381
||| |||||||||| |||| || || ||||| | || ||||| ||||||||||||||
Sbjct: 285 tgccaaggacggacacaccacaactggggagggtatggagtggggtgtcctcttcggctt 344
Query: 382 cggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcaccac 435
|||||| || ||||||||||||||| |||| || |||||||| |||||||||||
Sbjct: 345 cggccccggcctcaccgtcgagaccatcgttcttcacagcgttcccatcaccac 398
Score = 40.1 bits (20), Expect = 0.29
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 gaggtggggctcaccttcca 60
||||||||||||||||||||
Sbjct: 4 gaggtggggctcaccttcca 23
>gb|BE601240.1|BE601240 PI1_90_F05.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 590
Score = 210 bits (106), Expect = 1e-052
Identities = 292/354 (82%)
Strand = Plus / Plus
Query: 82 gctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctcggcatctc 141
||||||||||| |||||| | ||| |||||| ||||| ||| ||||| ||||||||
Sbjct: 16 gctcatctccatgaacattgagcgcttgctggaagacgctttcgcaccgcttggcatctc 75
Query: 142 cgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctcgaccaggt 201
||| |||||||||||||| |||||||||||||| ||||| || ||||| || || |||
Sbjct: 76 cgattggaactccatcttttgggtggcgcaccctggcggtccagccatactgaacatggt 135
Query: 202 ggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtcctctccga 261
|||||| ||||| || || ||||||||||| ||| | |||||||||||| |||| | ||
Sbjct: 136 ggaggctaaggttggccttgacaaggccagaatgtgtgccacccgccacatcctggcaga 195
Query: 262 gtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgcaagcgctc 321
||| ||||||||||| |||| || |||||||||||||| || |||||||| || | ||
Sbjct: 196 gtatggcaacatgtcaagcgtttgtgtcctcttcatccttgatgagatgcgaaacaggtc 255
Query: 322 cgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctcttcggctt 381
||| |||||||||| |||| || || ||||| | || ||||| ||||||||||||||
Sbjct: 256 tgccaaggacggacacaccacaactggggagggtatggagtggggtgtcctcttcggctt 315
Query: 382 cggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcaccac 435
|||||| || ||||||||||||||| |||| || |||||||| |||||||||||
Sbjct: 316 cggccccggcctcaccgtcgagaccatcgttcttcacagcgttcccatcaccac 369
>gb|BM317945.1|BM317945 PI1_13_D11.g9_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 610
Score = 210 bits (106), Expect = 1e-052
Identities = 292/354 (82%)
Strand = Plus / Plus
Query: 82 gctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctcggcatctc 141
||||||||||| |||||| | ||| |||||| ||||| ||| ||||| ||||||||
Sbjct: 20 gctcatctccatgaacattgagcgcttgctggaagacgctttcgcaccgcttggcatctc 79
Query: 142 cgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctcgaccaggt 201
||| |||||||||||||| |||||||||||||| ||||| || ||||| || || |||
Sbjct: 80 cgattggaactccatcttttgggtggcgcaccctggcggtccagccatactgaacatggt 139
Query: 202 ggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtcctctccga 261
|||||| ||||| || || ||||||||||| ||| | |||||||||||| |||| | ||
Sbjct: 140 ggaggctaaggttggccttgacaaggccagaatgtgtgccacccgccacatcctggcaga 199
Query: 262 gtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgcaagcgctc 321
||| ||||||||||| |||| || |||||||||||||| || |||||||| || | ||
Sbjct: 200 gtatggcaacatgtcaagcgtttgtgtcctcttcatccttgatgagatgcgaaacaggtc 259
Query: 322 cgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctcttcggctt 381
||| |||||||||| |||| || || ||||| | || ||||| ||||||||||||||
Sbjct: 260 tgccaaggacggacacaccacaactggggagggtatggagtggggtgtcctcttcggctt 319
Query: 382 cggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcaccac 435
|||||| || ||||||||||||||| |||| || |||||||| |||||||||||
Sbjct: 320 cggccccggcctcaccgtcgagaccatcgttcttcacagcgttcccatcaccac 373
>gb|AY069951.1| Sorghum bicolor chalcone synthase 8 mRNA, complete cds
Length = 1497
Score = 210 bits (106), Expect = 1e-052
Identities = 292/354 (82%)
Strand = Plus / Plus
Query: 82 gctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctcggcatctc 141
||||||||||| |||||| | ||| |||||| ||||| ||| ||||| ||||||||
Sbjct: 919 gctcatctccatgaacattgagcgcttgctggaagacgctttcgcaccgcttggcatctc 978
Query: 142 cgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctcgaccaggt 201
||| |||||||||||||| |||||||||||||| ||||| || ||||| || || |||
Sbjct: 979 cgattggaactccatcttttgggtggcgcaccctggcggtccagccatactgaacatggt 1038
Query: 202 ggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtcctctccga 261
|||||| ||||| || || ||||||||||| ||| | |||||||||||| |||| | ||
Sbjct: 1039 ggaggctaaggttggccttgacaaggccagaatgtgtgccacccgccacatcctggcaga 1098
Query: 262 gtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgcaagcgctc 321
||| ||||||||||| |||| || |||||||||||||| || |||||||| || | ||
Sbjct: 1099 gtatggcaacatgtcaagcgtttgtgtcctcttcatccttgatgagatgcgaaacaggtc 1158
Query: 322 cgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctcttcggctt 381
||| |||||||||| |||| || || ||||| | || ||||| ||||||||||||||
Sbjct: 1159 tgccaaggacggacacaccacaactggggagggtatggagtggggtgtcctcttcggctt 1218
Query: 382 cggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcaccac 435
|||||| || ||||||||||||||| |||| || |||||||| |||||||||||
Sbjct: 1219 cggccccggcctcaccgtcgagaccatcgttcttcacagcgttcccatcaccac 1272
Score = 73.8 bits (37), Expect = 2e-011
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 8 gactcggagggcgccatcgacggccacctccgcgaggtggggctcaccttcca 60
||||| ||||| |||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 845 gactcagagggtgccatcgagggccacctccgtgaggtggggctcaccttcca 897
>gb|BE355743.1|BE355743 DG1_116_C08.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 607
Score = 206 bits (104), Expect = 2e-051
Identities = 257/308 (83%)
Strand = Plus / Plus
Query: 128 ccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgcc 187
||||| ||||||||||| |||||||||||||| |||||||||||||| ||||| || |||
Sbjct: 38 ccgcttggcatctccgattggaactccatcttttgggtggcgcaccctggcggtccagcc 97
Query: 188 atcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgc 247
|| || || ||||||||| ||||| || || ||||||||||| ||| | |||||||||
Sbjct: 98 atactgaacatggtggaggctaaggttggccttgacaaggccagaatgtgtgccacccgc 157
Query: 248 cacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgag 307
||| |||| | ||||| ||||||||||| |||| || |||||||||||||| || |||
Sbjct: 158 cacatcctggcagagtatggcaacatgtcaagcgtttgtgtcctcttcatccttgatgag 217
Query: 308 atgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggc 367
||||| || | || ||| |||||||||| |||| || || ||||| | || |||||
Sbjct: 218 atgcgaaacaggtctgccaaggacggacacaccacaactggggagggtatggagtggggt 277
Query: 368 gtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtcccc 427
|||||||||||||||||||| || ||||||||||||||| |||| || |||||||| |||
Sbjct: 278 gtcctcttcggcttcggccccggcctcaccgtcgagaccatcgttcttcacagcgttccc 337
Query: 428 atcaccac 435
||||||||
Sbjct: 338 atcaccac 345
>gb|BE597782.1|BE597782 PI1_65_C02.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 424
Score = 206 bits (104), Expect = 2e-051
Identities = 257/308 (83%)
Strand = Plus / Plus
Query: 128 ccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgcc 187
||||| ||||||||||| |||||||||||||| |||||||||||||| ||||| || |||
Sbjct: 45 ccgcttggcatctccgattggaactccatcttttgggtggcgcaccctggcggtccagcc 104
Query: 188 atcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgc 247
|| || || ||||||||| ||||| || || ||||||||||| ||| | |||||||||
Sbjct: 105 atactgaacatggtggaggctaaggttggccttgacaaggccagaatgtgtgccacccgc 164
Query: 248 cacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgag 307
||| |||| | ||||| ||||||||||| |||| || |||||||||||||| || |||
Sbjct: 165 cacatcctggcagagtatggcaacatgtcaagcgtttgtgtcctcttcatccttgatgag 224
Query: 308 atgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggc 367
||||| || | || ||| |||||||||| |||| || || ||||| | || |||||
Sbjct: 225 atgcgaaacaggtctgccaaggacggacacaccacaactggggagggtatggagtggggt 284
Query: 368 gtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtcccc 427
|||||||||||||||||||| || ||||||||||||||| |||| || |||||||| |||
Sbjct: 285 gtcctcttcggcttcggccccggcctcaccgtcgagaccatcgttcttcacagcgttccc 344
Query: 428 atcaccac 435
||||||||
Sbjct: 345 atcaccac 352
>gb|BE362290.1|BE362290 DG1_85_F07.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 214
Score = 200 bits (101), Expect = 1e-049
Identities = 185/213 (86%)
Strand = Plus / Plus
Query: 154 catcttctgggtggcgcaccccggcgggcccgccatcctcgaccaggtggaggccaaggt 213
|||||| ||||||||||||||||| ||||| || ||||| | ||||||||||||||||||
Sbjct: 1 catcttttgggtggcgcaccccggtgggccagcaatcctggtccaggtggaggccaaggt 60
Query: 214 cgggctggacaaggccaggatgcgcgccacccgccacgtcctctccgagtacggcaacat 273
|||||| | |||| |||||||||| || || || ||||| ||||| |||||||||||
Sbjct: 61 cgggctaaagaaggagcggatgcgcgcgacgcgacatgtcctgtccgaatacggcaacat 120
Query: 274 gtccagcgcctgcgtcctcttcatcctcgacgagatgcgcaagcgctccgccgaggacgg 333
||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 121 gtctagcgcctgcgtgctcttcatcctcgacgagatgcgcaagcgctctgccgaggatgg 180
Query: 334 acaggccaccacgggcgagggcctcgactgggg 366
||||||||||| || || ||| | ||||||||
Sbjct: 181 ccaggccaccaccggtgaaggcttggactgggg 213
>gb|CD431579.1|CD431579 ETH1_9_E07.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_9_E07_A002 5', mRNA sequence
Length = 638
Score = 170 bits (86), Expect = 1e-040
Identities = 118/129 (91%)
Strand = Plus / Plus
Query: 1 cctgcccgactcggagggcgccatcgacggccacctccgcgaggtggggctcaccttcca 60
|||||| ||||| |||||||||||||||||||||||||||||||| |||||||| || ||
Sbjct: 480 cctgccggactccgagggcgccatcgacggccacctccgcgaggtcgggctcacgtttca 539
Query: 61 cctgctcaaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgc 120
||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || ||
Sbjct: 540 cctgctcaaggacgtgcccgggctcatctccnagaacatcgagcgcgcgctggaggaggc 599
Query: 121 gttcaagcc 129
||||||||
Sbjct: 600 attcaagcc 608
>gb|CX616163.1|CX616163 GABR1_26_F05.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_26_F05_A002 3', mRNA sequence
Length = 423
Score = 168 bits (85), Expect = 5e-040
Identities = 124/137 (90%)
Strand = Plus / Plus
Query: 310 gcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcgt 369
|||||| || |||||||||||||| ||||| ||| | ||||| ||| | |||||||||||
Sbjct: 1 gcgcaaacgttccgccgaggacggccaggcaacctccggcgaaggctttgactggggcgt 60
Query: 370 cctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccat 429
|||||||||||||| || || ||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gctcttcggcttcggtcctgggctcaccgtcgagaccgtcgtgctccacagcgtccccat 120
Query: 430 caccaccggagcggcca 446
|||||||||||||||||
Sbjct: 121 caccaccggagcggcca 137
>gb|AW283840.2|AW283840 LG1_260_D05.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 225
Score = 163 bits (82), Expect = 3e-038
Identities = 118/130 (90%)
Strand = Plus / Plus
Query: 322 cgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctcttcggctt 381
|||||| ||||| ||||||||| | || || ||| ||||||||||||| |||||||||||
Sbjct: 1 cgccgaagacggccaggccacctccggtgaaggcttcgactggggcgtgctcttcggctt 60
Query: 382 cggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcaccaccggagc 441
|||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 61 cggccccgggctcaccgtcgagaccgtcgtgctccacagcgttcccatcaccaccggagc 120
Query: 442 ggccaccgcc 451
||||| ||||
Sbjct: 121 ggccatcgcc 130
>gb|CN141529.1|CN141529 OX1_52_E12.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_52_E12_A002 3', mRNA sequence
Length = 750
Score = 135 bits (68), Expect = 7e-030
Identities = 86/92 (93%)
Strand = Plus / Plus
Query: 1 cctgcccgactcggagggcgccatcgacggccacctccgcgaggtggggctcaccttcca 60
|||||| ||||| |||||||||||||||||||||||||| ||||| |||||||| || ||
Sbjct: 462 cctgccggactccgagggcgccatcgacggccacctccgggaggtcgggctcacatttca 521
Query: 61 cctgctcaaggacgtgcccgggctcatctcca 92
||||||||||||||||||||||||||||||||
Sbjct: 522 cctgctcaaggacgtgcccgggctcatctcca 553
Score = 48.1 bits (24), Expect = 0.001
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 413 ctccacagcgtccccatcaccaccggagcggc 444
||||||||||||||||||||||| || |||||
Sbjct: 549 ctccacagcgtccccatcaccactggcgcggc 580
>gb|CW070887.1|CW070887 104_323_10591294_116_30485 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10591294, DNA
sequence
Length = 650
Score = 131 bits (66), Expect = 1e-028
Identities = 84/90 (93%)
Strand = Plus / Plus
Query: 357 tcgactggggcgtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctcc 416
||||||||||||||||||| ||||| ||||| || |||||||||||||||||||||||||
Sbjct: 5 tcgactggggcgtcctctttggctttggccccgggctcaccgtcgagaccgtcgtgctcc 64
Query: 417 acagcgtccccatcaccaccggagcggcca 446
|||| || ||||||||||||||||||||||
Sbjct: 65 acagtgttcccatcaccaccggagcggcca 94
>gb|BE598061.1|BE598061 PI1_65_C02.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 214
Score = 115 bits (58), Expect = 6e-024
Identities = 164/200 (82%)
Strand = Plus / Plus
Query: 82 gctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctcggcatctc 141
||||||||||| |||||| | ||| |||||| ||||| ||| ||||| ||||||||
Sbjct: 13 gctcatctccatgaacattgagcgcttgctggaagacgctttcgcaccgcttggcatctc 72
Query: 142 cgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctcgaccaggt 201
||| |||||||||||||| |||||||||||||| ||||| || ||||| || || |||
Sbjct: 73 cgattggaactccatcttttgggtggcgcaccctggcggtccagccatactgaacatggt 132
Query: 202 ggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtcctctccga 261
|||||| ||||| || || ||||||||||| ||| | |||||||||||| | || | ||
Sbjct: 133 ggaggctaaggttggccttgacaaggccagaatgtgtgccacccgccacatnctgncaga 192
Query: 262 gtacggcaacatgtccagcg 281
||| ||||||||||| ||||
Sbjct: 193 gtatggcaacatgtcaagcg 212
>gb|BE366441.1|BE366441 PI1_33_A03.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 476
Score = 113 bits (57), Expect = 2e-023
Identities = 82/89 (92%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 359 gactggggcgtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccac 418
||||||||||| || ||||||||||| || || ||||||||||||||||||||| |||||
Sbjct: 1 gactggggcgtgcttttcggcttcggtcctgggctcaccgtcgagaccgtcgtgttccac 60
Query: 419 agcgt-ccccatcaccaccggagcggcca 446
||||| |||||||||||||||||||||||
Sbjct: 61 agcgtcccccatcaccaccggagcggcca 89
Score = 69.9 bits (35), Expect = 3e-010
Identities = 44/46 (95%), Gaps = 2/46 (4%)
Strand = Plus / Plus
Query: 707 tggtgaggtattgggtatacctgtgtaagacaagcttggctggttt 752
||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 401 tggtgaggtattg--tatacctgtgtaagacaagcttggctggttt 444
>gb|BM327322.1|BM327322 PIC1_12_A10.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 456
Score = 111 bits (56), Expect = 1e-022
Identities = 146/176 (82%)
Strand = Plus / Plus
Query: 260 gagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgcaagcgc 319
||||| ||||||||||| |||| || ||||| |||||||| || |||||||| || |
Sbjct: 11 gagtatggcaacatgtcaagcgtttgtgtccttttcatccttgatgagatgcgaaacagg 70
Query: 320 tccgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctcttcggc 379
|| ||| |||||||||| |||| || || ||||| | || ||||| ||||||||||||
Sbjct: 71 tctgccaaggacggacacaccacaactggggagggtatggagtggggtgtcctcttcggc 130
Query: 380 ttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcaccac 435
|||||||| || ||||||||||||||| |||| || |||||||| |||||||||||
Sbjct: 131 ttcggccccggcctcaccgtcgagaccatcgttcttcacagcgttcccatcaccac 186
>gb|CD430716.1|CD430716 ETH1_20_C06.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_20_C06_A002 5', mRNA sequence
Length = 652
Score = 111 bits (56), Expect = 1e-022
Identities = 70/75 (93%)
Strand = Plus / Plus
Query: 25 cgacggccacctccgcgaggtggggctcaccttccacctgctcaaggacgtgcccgggct 84
||||||||||||||| ||||| |||||||| ||||||||||||||||||||||| |||||
Sbjct: 566 cgacggccacctccgtgaggtcgggctcacgttccacctgctcaaggacgtgcctgggct 625
Query: 85 catctccaagaacat 99
||||||| |||||||
Sbjct: 626 catctccnagaacat 640
>gb|CX616315.1|CX616315 GABR1_27_E07.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_27_E07_A002 3', mRNA sequence
Length = 436
Score = 101 bits (51), Expect = 9e-020
Identities = 54/55 (98%)
Strand = Plus / Plus
Query: 392 ctcaccgtcgagaccgtcgtgctccacagcgtccccatcaccaccggagcggcca 446
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 ctcaccgttgagaccgtcgtgctccacagcgtccccatcaccaccggagcggcca 67
Score = 69.9 bits (35), Expect = 3e-010
Identities = 44/46 (95%), Gaps = 2/46 (4%)
Strand = Plus / Plus
Query: 707 tggtgaggtattgggtatacctgtgtaagacaagcttggctggttt 752
||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 379 tggtgaggtattg--tatacctgtgtaagacaagcttggctggttt 422
>gb|CD213169.1|CD213169 HS1_29_F02.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_29_F02_A012 3', mRNA sequence
Length = 231
Score = 95.6 bits (48), Expect = 6e-018
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 383 ggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcaccaccggagcg 442
||||| || ||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 4 ggccccgggctcaccgtcgagaccgtcgtgctccacagtgttcccatcaccaccggagcg 63
Query: 443 gcca 446
||||
Sbjct: 64 gcca 67
>gb|CF431104.1|CF431104 NIT1_6_D10.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_6_D10_A002 3', mRNA sequence
Length = 428
Score = 89.7 bits (45), Expect = 4e-016
Identities = 45/45 (100%)
Strand = Plus / Plus
Query: 402 agaccgtcgtgctccacagcgtccccatcaccaccggagcggcca 446
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agaccgtcgtgctccacagcgtccccatcaccaccggagcggcca 45
Score = 69.9 bits (35), Expect = 3e-010
Identities = 44/46 (95%), Gaps = 2/46 (4%)
Strand = Plus / Plus
Query: 707 tggtgaggtattgggtatacctgtgtaagacaagcttggctggttt 752
||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 357 tggtgaggtattg--tatacctgtgtaagacaagcttggctggttt 400
>gb|BE355662.1|BE355662 DG1_116_C08.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 500
Score = 79.8 bits (40), Expect = 3e-013
Identities = 91/108 (84%)
Strand = Plus / Plus
Query: 82 gctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctcggcatctc 141
||||||||||| |||||| | ||| |||||| ||||| ||| ||||| ||||||||
Sbjct: 370 gctcatctccatgaacattgagcgcttgctggaagacgctttcgcaccgcttggcatctc 429
Query: 142 cgactggaactccatcttctgggtggcgcaccccggcgggcccgccat 189
||| |||||||||||||| |||||||||||||| ||||| || |||||
Sbjct: 430 cgattggaactccatcttttgggtggcgcaccctggcggtccagccat 477
Score = 73.8 bits (37), Expect = 2e-011
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 8 gactcggagggcgccatcgacggccacctccgcgaggtggggctcaccttcca 60
||||| ||||| |||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 296 gactcagagggtgccatcgagggccacctccgtgaggtggggctcaccttcca 348
>gb|BI075646.1|BI075646 IP1_23_C09.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 328
Score = 69.9 bits (35), Expect = 3e-010
Identities = 44/46 (95%), Gaps = 2/46 (4%)
Strand = Plus / Plus
Query: 707 tggtgaggtattgggtatacctgtgtaagacaagcttggctggttt 752
||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 254 tggtgaggtattg--tatacctgtgtaagacaagcttggctggttt 297
>gb|CN141822.1|CN141822 WOUND1_2_C07.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_2_C07_A002 3', mRNA sequence
Length = 352
Score = 69.9 bits (35), Expect = 3e-010
Identities = 44/46 (95%), Gaps = 2/46 (4%)
Strand = Plus / Plus
Query: 707 tggtgaggtattgggtatacctgtgtaagacaagcttggctggttt 752
||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 236 tggtgaggtattg--tatacctgtgtaagacaagcttggctggttt 279
>gb|CX619715.1|CX619715 GABR1_47_G05.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_47_G05_A002 3', mRNA sequence
Length = 293
Score = 69.9 bits (35), Expect = 3e-010
Identities = 44/46 (95%), Gaps = 2/46 (4%)
Strand = Plus / Plus
Query: 707 tggtgaggtattgggtatacctgtgtaagacaagcttggctggttt 752
||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 248 tggtgaggtattg--tatacctgtgtaagacaagcttggctggttt 291
Score = 38.2 bits (19), Expect = 1.1
Identities = 40/45 (88%), Gaps = 4/45 (8%)
Strand = Plus / Plus
Query: 562 agtagctgatactatttttccatgtactgt---cagtcgcacaat 603
||||||||||| |||||| ||||||||||| ||||||||||||
Sbjct: 97 agtagctgatattatttt-ccatgtactgttgccagtcgcacaat 140
>gb|BE363966.1|BE363966 PI1_10_H06.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 258
Score = 67.9 bits (34), Expect = 1e-009
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 362 tggggcgtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagc 421
||||| ||||| |||||||||||||| || ||| ||||||||||| |||| | ||||||
Sbjct: 22 tggggtgtccttttcggcttcggccccggcctccccgtcgagaccatcgtttttcacagc 81
Query: 422 gtccccatcaccac 435
|| |||||||||||
Sbjct: 82 gttcccatcaccac 95
>gb|CN135967.1|CN135967 OX1_40_B06.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_40_B06_A002 3', mRNA sequence
Length = 371
Score = 63.9 bits (32), Expect = 2e-008
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 396 ccgtcgagaccgtcgtgctccacagcgtccccatca 431
||||||||||||||||||||||||| ||||||||||
Sbjct: 25 ccgtcgagaccgtcgtgctccacagggtccccatca 60
>gb|CF431127.1|CF431127 NIT1_6_H12.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_6_H12_A002 3', mRNA sequence
Length = 279
Score = 61.9 bits (31), Expect = 8e-008
Identities = 43/46 (93%), Gaps = 2/46 (4%)
Strand = Plus / Plus
Query: 707 tggtgaggtattgggtatacctgtgtaagacaagcttggctggttt 752
||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 205 tggtgaggtattg--tatccctgtgtaagacaagcttggctggttt 248
>gb|CX617869.1|CX617869 GABR1_36_G03.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_36_G03_A002 3', mRNA sequence
Length = 305
Score = 61.9 bits (31), Expect = 8e-008
Identities = 43/46 (93%), Gaps = 2/46 (4%)
Strand = Plus / Plus
Query: 707 tggtgaggtattgggtatacctgtgtaagacaagcttggctggttt 752
||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct: 256 tggtgaggtattg--tatacctgtgtaagacaagcttgggtggttt 299
>gb|CD232848.1|CD232848 SS1_10_F02.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_10_F02_A012 3', mRNA sequence
Length = 251
Score = 54.0 bits (27), Expect = 2e-005
Identities = 36/38 (94%), Gaps = 2/38 (5%)
Strand = Plus / Plus
Query: 707 tggtgaggtattgggtatacctgtgtaagacaagcttg 744
||||||||||||| |||||||||||||||||||||||
Sbjct: 216 tggtgaggtattg--tatacctgtgtaagacaagcttg 251
>gb|CD206076.1|CD206076 HS1_20_D02.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_20_D02_A012 3', mRNA sequence
Length = 161
Score = 46.1 bits (23), Expect = 0.005
Identities = 41/46 (89%), Gaps = 2/46 (4%)
Strand = Plus / Plus
Query: 707 tggtgaggtattgggtatacctgtgtaagacaagcttggctggttt 752
|||||||||||| |||| |||||||||| |||||||||| |||||
Sbjct: 113 tggtgaggtatt--gtatccctgtgtaagccaagcttggcgggttt 156
>gb|AW672448.1|AW672448 LG1_359_D12.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 196
Score = 42.1 bits (21), Expect = 0.073
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 414 tccacagcgtccccatcaccaccggagcggcca 446
||||||| || |||||||||||||||| |||||
Sbjct: 3 tccacagggttcccatcaccaccggaggggcca 35
>gb|BG411388.1|BG411388 EM1_57_E10.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 588
Score = 42.1 bits (21), Expect = 0.073
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 193 cgaccaggtggaggccaaggtcgggctgg 221
|||| ||||||||||||||||| ||||||
Sbjct: 244 cgacgaggtggaggccaaggtccggctgg 272
>gb|CL147747.1|CL147747 104_327_10592607_116_31781_115 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10592607, DNA
sequence
Length = 654
Score = 40.1 bits (20), Expect = 0.29
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 198 aggtggaggccaaggtcgggctgg 221
||||||||||||||||| ||||||
Sbjct: 440 aggtggaggccaaggtcaggctgg 417
>gb|CW020718.1|CW020718 104_109_10409129_116_30501 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10409129, DNA
sequence
Length = 674
Score = 40.1 bits (20), Expect = 0.29
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 310 gcgcaagcgctccgccgaggacgg 333
|||||||||| |||||||||||||
Sbjct: 490 gcgcaagcgccccgccgaggacgg 467
>gb|CW090472.1|CW090472 104_436_10949299_114_32604_074 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10949299, DNA
sequence
Length = 714
Score = 40.1 bits (20), Expect = 0.29
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 353 ggcctcgactggggcgtcctcttcggct 380
||||||||||||||| ||||| ||||||
Sbjct: 177 ggcctcgactggggcctcctcgtcggct 150
>gb|CW091748.1|CW091748 104_453_10998746_114_33031_001 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10998746, DNA
sequence
Length = 692
Score = 40.1 bits (20), Expect = 0.29
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 310 gcgcaagcgctccgccgaggacgg 333
|||||||||| |||||||||||||
Sbjct: 631 gcgcaagcgccccgccgaggacgg 654
>gb|CW101011.1|CW101011 104_468_11004410_116_34399_005 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11004410, DNA
sequence
Length = 461
Score = 40.1 bits (20), Expect = 0.29
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 353 ggcctcgactggggcgtcctcttcggct 380
||||||||||||||| ||||| ||||||
Sbjct: 104 ggcctcgactggggcctcctcgtcggct 77
>gb|CW101014.1|CW101014 104_468_11004412_116_34399_006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11004412, DNA
sequence
Length = 526
Score = 40.1 bits (20), Expect = 0.29
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 353 ggcctcgactggggcgtcctcttcggct 380
||||||||||||||| ||||| ||||||
Sbjct: 104 ggcctcgactggggcctcctcgtcggct 77
>gb|CW150808.1|CW150808 104_551_11143609_116_36311_009 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11143609, DNA
sequence
Length = 651
Score = 40.1 bits (20), Expect = 0.29
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 353 ggcctcgactggggcgtcctcttcggct 380
||||||||||||||| ||||| ||||||
Sbjct: 393 ggcctcgactggggcctcctcgtcggct 420
>gb|CW150809.1|CW150809 104_551_11143609_148_36312_009 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11143609, DNA
sequence
Length = 607
Score = 40.1 bits (20), Expect = 0.29
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 353 ggcctcgactggggcgtcctcttcggct 380
||||||||||||||| ||||| ||||||
Sbjct: 525 ggcctcgactggggcctcctcgtcggct 498
>gb|CW166835.1|CW166835 104_575_11153277_148_36767_083 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11153277, DNA
sequence
Length = 733
Score = 40.1 bits (20), Expect = 0.29
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 353 ggcctcgactggggcgtcctcttcggct 380
||||||||||||||| ||||| ||||||
Sbjct: 417 ggcctcgactggggcctcctcgtcggct 444
>gb|CW175312.1|CW175312 104_587_11157871_148_36839_020 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11157871, DNA
sequence
Length = 696
Score = 40.1 bits (20), Expect = 0.29
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 310 gcgcaagcgctccgccgaggacgg 333
|||||||||| |||||||||||||
Sbjct: 81 gcgcaagcgccccgccgaggacgg 58
>gb|BE355032.1|BE355032 DG1_10_A04.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 429
Score = 40.1 bits (20), Expect = 0.29
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 198 aggtggaggccaaggtcgggctgg 221
||||||||||||||||| ||||||
Sbjct: 358 aggtggaggccaaggtcaggctgg 381
>gb|BG323036.1|BG323036 EM1_14_B07.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 384
Score = 40.1 bits (20), Expect = 0.29
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 198 aggtggaggccaaggtcgggctgg 221
||||||||||||||||| ||||||
Sbjct: 330 aggtggaggccaaggtcaggctgg 353
>gb|CF758924.1|CF758924 DSAF1_38_B11.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_38_B11_A011 3', mRNA sequence
Length = 530
Score = 40.1 bits (20), Expect = 0.29
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 198 aggtggaggccaaggtcgggctgg 221
||||||||||||||||| ||||||
Sbjct: 75 aggtggaggccaaggtcaggctgg 98
>gb|CF760404.1|CF760404 DSAF1_60_C03.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_60_C03_A011 5', mRNA sequence
Length = 379
Score = 40.1 bits (20), Expect = 0.29
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 198 aggtggaggccaaggtcgggctgg 221
||||||||||||||||| ||||||
Sbjct: 75 aggtggaggccaaggtcaggctgg 98
>gb|CF761031.1|CF761031 DSAF1_70_B06.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_70_B06_A011 5', mRNA sequence
Length = 475
Score = 40.1 bits (20), Expect = 0.29
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 198 aggtggaggccaaggtcgggctgg 221
||||||||||||||||| ||||||
Sbjct: 75 aggtggaggccaaggtcaggctgg 98
>gb|CF761140.1|CF761140 DSAF1_71_F08.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_71_F08_A011 5', mRNA sequence
Length = 443
Score = 40.1 bits (20), Expect = 0.29
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 198 aggtggaggccaaggtcgggctgg 221
||||||||||||||||| ||||||
Sbjct: 75 aggtggaggccaaggtcaggctgg 98
>gb|CW069021.1|CW069021 104_318_10525528_1_30095 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10525528, DNA
sequence
Length = 318
Score = 38.2 bits (19), Expect = 1.1
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 158 ttctgggtggcgcaccccggcgggcccgccatcct 192
||||||| || ||||||||||||||| || |||||
Sbjct: 148 ttctgggcggtgcaccccggcgggccggcgatcct 114
>gb|CW163319.1|CW163319 104_570_11151400_116_36452_050 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11151400, DNA
sequence
Length = 600
Score = 38.2 bits (19), Expect = 1.1
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 158 ttctgggtggcgcaccccggcgggcccgccatcct 192
||||||| || ||||||||||||||| || |||||
Sbjct: 584 ttctgggcggtgcaccccggcgggccggcgatcct 550
>gb|CW264393.1|CW264393 104_733_11231267_148_35251_046 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11231267, DNA
sequence
Length = 743
Score = 38.2 bits (19), Expect = 1.1
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 608 atatataataatatctctatata 630
|||||||||||||| ||||||||
Sbjct: 728 atatataataatatgtctatata 706
>gb|CW271065.1|CW271065 104_743_11402792_116_35339_030 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11402792, DNA
sequence
Length = 668
Score = 38.2 bits (19), Expect = 1.1
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 608 atatataataatatctctatata 630
|||||||||||||| ||||||||
Sbjct: 596 atatataataatatgtctatata 618
>gb|CW316610.1|CW316610 104_808_11472981_148_35855_093 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11472981, DNA
sequence
Length = 653
Score = 38.2 bits (19), Expect = 1.1
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 608 atatataataatatctctatata 630
|||||||||||||| ||||||||
Sbjct: 35 atatataataatatgtctatata 57
>gb|CW472862.1|CW472862 fsbb001f227p23k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f227p23, DNA
sequence
Length = 542
Score = 38.2 bits (19), Expect = 1.1
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 608 atatataataatatctctatata 630
|||||||||||||| ||||||||
Sbjct: 382 atatataataatatgtctatata 404
>gb|BZ335455.1|BZ335455 hx97g10.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hx97g10 5', DNA sequence
Length = 351
Score = 36.2 bits (18), Expect = 4.5
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 107 gcgctggacgacgcgttc 124
||||||||||||||||||
Sbjct: 114 gcgctggacgacgcgttc 97
>gb|CL174600.1|CL174600 104_379_10891755_116_31769_123 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10891755, DNA
sequence
Length = 616
Score = 36.2 bits (18), Expect = 4.5
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 421 cgtccccatcaccaccgg 438
||||||||||||||||||
Sbjct: 435 cgtccccatcaccaccgg 452
>gb|CW048752.1|CW048752 104_287_10513609_114_30211 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10513609, DNA
sequence
Length = 648
Score = 36.2 bits (18), Expect = 4.5
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 608 atatataataatatctct 625
||||||||||||||||||
Sbjct: 149 atatataataatatctct 132
Score = 36.2 bits (18), Expect = 4.5
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 608 atatataataatatctct 625
||||||||||||||||||
Sbjct: 87 atatataataatatctct 70
>gb|CW094174.1|CW094174 104_457_11000170_116_37476_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11000170, DNA
sequence
Length = 719
Score = 36.2 bits (18), Expect = 4.5
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 156 tcttctgggtggcgcaccccgg 177
|||||||||||| |||||||||
Sbjct: 421 tcttctgggtggtgcaccccgg 400
>gb|CW147494.1|CW147494 104_540_11139538_148_34995_035 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11139538, DNA
sequence
Length = 647
Score = 36.2 bits (18), Expect = 4.5
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 156 tcttctgggtggcgcaccccgg 177
|||||||||||| |||||||||
Sbjct: 386 tcttctgggtggtgcaccccgg 365
>gb|CW157184.1|CW157184 104_560_11147092_116_36382_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11147092, DNA
sequence
Length = 632
Score = 36.2 bits (18), Expect = 4.5
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 228 ccaggatgcgcgccaccc 245
||||||||||||||||||
Sbjct: 545 ccaggatgcgcgccaccc 528
>gb|CW157185.1|CW157185 104_560_11147092_148_36381_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11147092, DNA
sequence
Length = 625
Score = 36.2 bits (18), Expect = 4.5
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 228 ccaggatgcgcgccaccc 245
||||||||||||||||||
Sbjct: 86 ccaggatgcgcgccaccc 103
>gb|CW162656.1|CW162656 104_570_11151053_148_36450_031 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11151053, DNA
sequence
Length = 651
Score = 36.2 bits (18), Expect = 4.5
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 166 ggcgcaccccggcgggcc 183
||||||||||||||||||
Sbjct: 220 ggcgcaccccggcgggcc 237
>gb|CW166722.1|CW166722 104_575_11153210_116_36765_005 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11153210, DNA
sequence
Length = 683
Score = 36.2 bits (18), Expect = 4.5
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 156 tcttctgggtggcgcaccccgg 177
|||||||||||| |||||||||
Sbjct: 659 tcttctgggtggtgcaccccgg 638
>gb|CW215033.1|CW215033 104_647_11194330_148_37163_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11194330, DNA
sequence
Length = 662
Score = 36.2 bits (18), Expect = 4.5
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 421 cgtccccatcaccaccgg 438
||||||||||||||||||
Sbjct: 549 cgtccccatcaccaccgg 532
>gb|CW229863.1|CW229863 104_671_11207542_116_37268_089 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11207542, DNA
sequence
Length = 621
Score = 36.2 bits (18), Expect = 4.5
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 474 ttcgtcgtcgtctcgttcgtca 495
|||||||||||| |||||||||
Sbjct: 162 ttcgtcgtcgtcgcgttcgtca 141
>gb|CW231466.1|CW231466 104_680_11211136_116_37342_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11211136, DNA
sequence
Length = 648
Score = 36.2 bits (18), Expect = 4.5
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 474 ttcgtcgtcgtctcgttcgtca 495
|||||||||||| |||||||||
Sbjct: 475 ttcgtcgtcgtcgcgttcgtca 454
>gb|CW250462.1|CW250462 104_712_11223403_148_35056_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11223403, DNA
sequence
Length = 714
Score = 36.2 bits (18), Expect = 4.5
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 156 tcttctgggtggcgcaccccgg 177
|||||||||||| |||||||||
Sbjct: 405 tcttctgggtggtgcaccccgg 426
>gb|CW266772.1|CW266772 104_736_11232612_116_35284_038 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11232612, DNA
sequence
Length = 615
Score = 36.2 bits (18), Expect = 4.5
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 156 tcttctgggtggcgcaccccgg 177
|||||||||||| |||||||||
Sbjct: 197 tcttctgggtggtgcaccccgg 218
>gb|CW286823.1|CW286823 104_764_11411093_148_35517_019 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11411093, DNA
sequence
Length = 585
Score = 36.2 bits (18), Expect = 4.5
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 516 gcaaataataatgtgctc 533
||||||||||||||||||
Sbjct: 203 gcaaataataatgtgctc 186
>gb|CW319123.1|CW319123 104_811_11474317_116_35878_053 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11474317, DNA
sequence
Length = 646
Score = 36.2 bits (18), Expect = 4.5
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 295 catcctcgacgagatgcgcaag 316
|||||||| |||||||||||||
Sbjct: 260 catcctcggcgagatgcgcaag 239
>gb|CW323726.1|CW323726 104_818_11476783_148_35908_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11476783, DNA
sequence
Length = 687
Score = 36.2 bits (18), Expect = 4.5
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 421 cgtccccatcaccaccgg 438
||||||||||||||||||
Sbjct: 524 cgtccccatcaccaccgg 507
>gb|CW354252.1|CW354252 fsbb001f017g04f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f017g04, DNA
sequence
Length = 764
Score = 36.2 bits (18), Expect = 4.5
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 516 gcaaataataatgtgctc 533
||||||||||||||||||
Sbjct: 359 gcaaataataatgtgctc 376
>gb|CW374356.1|CW374356 fsbb001f051d01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f051d01, DNA
sequence
Length = 429
Score = 36.2 bits (18), Expect = 4.5
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 99 tcggccgcgcgctggacg 116
||||||||||||||||||
Sbjct: 24 tcggccgcgcgctggacg 41
>gb|CW379371.1|CW379371 fsbb001f058j20f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f058j20, DNA
sequence
Length = 823
Score = 36.2 bits (18), Expect = 4.5
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 100 cggccgcgcgctggacgacgcg 121
|||||| |||||||||||||||
Sbjct: 536 cggccgggcgctggacgacgcg 515
>gb|CW385663.1|CW385663 fsbb001f069d16k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f069d16, DNA
sequence
Length = 621
Score = 36.2 bits (18), Expect = 4.5
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 294 tcatcctcgacgagatgc 311
||||||||||||||||||
Sbjct: 151 tcatcctcgacgagatgc 134
>gb|CW391986.1|CW391986 fsbb001f078g08f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f078g08, DNA
sequence
Length = 631
Score = 36.2 bits (18), Expect = 4.5
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 295 catcctcgacgagatgcgcaag 316
|||||||| |||||||||||||
Sbjct: 488 catcctcggcgagatgcgcaag 467
>gb|CW402276.1|CW402276 fsbb001f093h19f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f093h19, DNA
sequence
Length = 420
Score = 36.2 bits (18), Expect = 4.5
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 310 gcgcaagcgctccgccgaggac 331
|||||||||| |||||||||||
Sbjct: 142 gcgcaagcgccccgccgaggac 121
>gb|CW466027.1|CW466027 fsbb001f217b08k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f217b08, DNA
sequence
Length = 698
Score = 36.2 bits (18), Expect = 4.5
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 228 ccaggatgcgcgccaccc 245
||||||||||||||||||
Sbjct: 698 ccaggatgcgcgccaccc 681
>gb|CW471249.1|CW471249 fsbb001f225a16f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f225a16, DNA
sequence
Length = 233
Score = 36.2 bits (18), Expect = 4.5
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 99 tcggccgcgcgctggacg 116
||||||||||||||||||
Sbjct: 39 tcggccgcgcgctggacg 56
>gb|CW475788.1|CW475788 fsbb001f232f08k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f232f08, DNA
sequence
Length = 428
Score = 36.2 bits (18), Expect = 4.5
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 166 ggcgcaccccggcgggcc 183
||||||||||||||||||
Sbjct: 242 ggcgcaccccggcgggcc 259
>gb|CW486373.1|CW486373 fsbb001f249j09k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f249j09, DNA
sequence
Length = 706
Score = 36.2 bits (18), Expect = 4.5
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 516 gcaaataataatgtgctc 533
||||||||||||||||||
Sbjct: 495 gcaaataataatgtgctc 478
>gb|CW489991.1|CW489991 fsbb001f275d13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f275d13, DNA
sequence
Length = 702
Score = 36.2 bits (18), Expect = 4.5
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 608 atatataataatatctct 625
||||||||||||||||||
Sbjct: 57 atatataataatatctct 40
>gb|AW671621.1|AW671621 LG1_349_C03.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 486
Score = 36.2 bits (18), Expect = 4.5
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 175 cggcgggcccgccatcctcgac 196
|||||||| |||||||||||||
Sbjct: 130 cggcgggcgcgccatcctcgac 151
>gb|BE918190.1|BE918190 OV1_3_A05.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 538
Score = 36.2 bits (18), Expect = 4.5
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 99 tcggccgcgcgctggacg 116
||||||||||||||||||
Sbjct: 73 tcggccgcgcgctggacg 90
>gb|BF176964.1|BF176964 EM1_4_H06.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 465
Score = 36.2 bits (18), Expect = 4.5
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 310 gcgcaagcgctccgccgaggac 331
|||||||||| |||||||||||
Sbjct: 350 gcgcaagcgccccgccgaggac 371
>gb|BF177217.1|BF177217 EM1_1_F02.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 444
Score = 36.2 bits (18), Expect = 4.5
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 310 gcgcaagcgctccgccgaggac 331
|||||||||| |||||||||||
Sbjct: 358 gcgcaagcgccccgccgaggac 379
>gb|BG157885.1|BG157885 EM1_6_B02.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 370
Score = 36.2 bits (18), Expect = 4.5
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 310 gcgcaagcgctccgccgaggac 331
|||||||||| |||||||||||
Sbjct: 347 gcgcaagcgccccgccgaggac 368
>gb|BG322438.1|BG322438 EM1_24_H12.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 545
Score = 36.2 bits (18), Expect = 4.5
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 310 gcgcaagcgctccgccgaggac 331
|||||||||| |||||||||||
Sbjct: 203 gcgcaagcgccccgccgaggac 224
>gb|BG356635.1|BG356635 EM1_24_H12.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 694
Score = 36.2 bits (18), Expect = 4.5
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 310 gcgcaagcgctccgccgaggac 331
|||||||||| |||||||||||
Sbjct: 31 gcgcaagcgccccgccgaggac 52
>gb|BG556047.1|BG556047 EM1_66_A04.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 445
Score = 36.2 bits (18), Expect = 4.5
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 99 tcggccgcgcgctggacg 116
||||||||||||||||||
Sbjct: 393 tcggccgcgcgctggacg 410
>gb|BG556048.1|BG556048 EM1_66_A05.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 450
Score = 36.2 bits (18), Expect = 4.5
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 99 tcggccgcgcgctggacg 116
||||||||||||||||||
Sbjct: 393 tcggccgcgcgctggacg 410
>gb|BG556134.1|BG556134 EM1_68_B09.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 527
Score = 36.2 bits (18), Expect = 4.5
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 310 gcgcaagcgctccgccgaggac 331
|||||||||| |||||||||||
Sbjct: 329 gcgcaagcgccccgccgaggac 350
>gb|BG649343.1|BG649343 EM1_78_C07.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 500
Score = 36.2 bits (18), Expect = 4.5
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 99 tcggccgcgcgctggacg 116
||||||||||||||||||
Sbjct: 393 tcggccgcgcgctggacg 410
>gb|CF430757.1|CF430757 NIT1_2_F01.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_2_F01_A002 3', mRNA sequence
Length = 528
Score = 36.2 bits (18), Expect = 4.5
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 474 ttcgtcgtcgtctcgttc 491
||||||||||||||||||
Sbjct: 243 ttcgtcgtcgtctcgttc 226
>gb|CF430763.1|CF430763 NIT1_2_D01.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_2_D01_A002 3', mRNA sequence
Length = 528
Score = 36.2 bits (18), Expect = 4.5
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 474 ttcgtcgtcgtctcgttc 491
||||||||||||||||||
Sbjct: 243 ttcgtcgtcgtctcgttc 226
>gb|CF482834.1|CF482834 POL1_9_A11.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_9_A11_A002 5', mRNA sequence
Length = 277
Score = 36.2 bits (18), Expect = 4.5
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 474 ttcgtcgtcgtctcgttcgtca 495
|||||||||||| |||||||||
Sbjct: 215 ttcgtcgtcgtcgcgttcgtca 194
>gb|CN133523.1|CN133523 OX1_12_F06.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_12_F06_A002 5', mRNA sequence
Length = 599
Score = 36.2 bits (18), Expect = 4.5
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 99 tcggccgcgcgctggacg 116
||||||||||||||||||
Sbjct: 370 tcggccgcgcgctggacg 387
>gb|CN137816.1|CN137816 OX1_59_G08.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_59_G08_A002 5', mRNA sequence
Length = 378
Score = 36.2 bits (18), Expect = 4.5
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 622 ctctatatatgcatttca 639
||||||||||||||||||
Sbjct: 307 ctctatatatgcatttca 324
>gb|CN144986.1|CN144986 WOUND1_26_D02.b2_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_26_D02_A002 3', mRNA sequence
Length = 424
Score = 36.2 bits (18), Expect = 4.5
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 364 gggcgtcctcttcggcttcggc 385
|||||||||||||||| |||||
Sbjct: 108 gggcgtcctcttcggcctcggc 129
Database: Sorghum_nucl_with_EST.fasta
Posted date: May 2, 2006 3:37 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 271,610
Number of Sequences: 832831
Number of extensions: 271610
Number of successful extensions: 72641
Number of sequences better than 10.0: 173
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 72245
Number of HSP's gapped (non-prelim): 308
length of query: 761
length of database: 491,359,669
effective HSP length: 20
effective length of query: 741
effective length of database: 474,703,049
effective search space: 351754959309
effective search space used: 351754959309
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)