BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1716394.2.1
(1074 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN136044.1|CN136044 OX1_40_A10.g1_A002 Oxidatively-stres... 1065 0.0
gb|CF434042.1|CF434042 NIT1_31_B05.g1_A002 Nitrogen-deficie... 1021 0.0
gb|CN139909.1|CN139909 OX1_24_H06.g1_A002 Oxidatively-stres... 963 0.0
gb|BE362217.1|BE362217 DG1_85_A11.b1_A002 Dark Grown 1 (DG1... 868 0.0
gb|CD222546.1|CD222546 CCC1_22_B05.g1_A007 Callus culture/c... 839 0.0
gb|CD223674.1|CD223674 CCC1_29_D06.g1_A007 Callus culture/c... 839 0.0
gb|BG560428.1|BG560428 RHIZ2_74_C05.b1_A003 Rhizome2 (RHIZ2... 700 0.0
gb|BG559840.1|BG559840 RHIZ2_74_C05.g1_A003 Rhizome2 (RHIZ2... 620 e-176
gb|CN139828.1|CN139828 OX1_24_H06.b1_A002 Oxidatively-stres... 620 e-176
gb|BE362325.1|BE362325 DG1_85_A11.g1_A002 Dark Grown 1 (DG1... 618 e-175
gb|CN135961.1|CN135961 OX1_40_A10.b1_A002 Oxidatively-stres... 611 e-173
gb|CB929208.1|CB929208 ABA1_40_E05.g1_A012 Abscisic acid-tr... 559 e-157
gb|BG357936.1|BG357936 OV2_32_B07.b1_A002 Ovary 2 (OV2) Sor... 555 e-156
gb|BE362211.1|BE362211 DG1_85_C11.b1_A002 Dark Grown 1 (DG1... 547 e-154
gb|CD222621.1|CD222621 CCC1_23_G08.b1_A007 Callus culture/c... 543 e-152
gb|CD223647.1|CD223647 CCC1_29_D06.b1_A007 Callus culture/c... 529 e-148
gb|BM326068.1|BM326068 PIC1_65_D07.b1_A002 Pathogen-infecte... 527 e-148
gb|BG357617.1|BG357617 OV2_32_B07.g1_A002 Ovary 2 (OV2) Sor... 486 e-135
gb|CF760183.1|CF760183 DSAF1_56_E07.b1_A011 Drought-stresse... 476 e-132
gb|CF433936.1|CF433936 NIT1_31_B05.b1_A002 Nitrogen-deficie... 474 e-132
gb|BE125102.1|BE125102 DG1_16_C07.b1_A002 Dark Grown 1 (DG1... 420 e-115
gb|BM330914.1|BM330914 PIC1_67_B06.g1_A002 Pathogen-infecte... 414 e-114
gb|CF760685.1|CF760685 DSAF1_64_F03.b1_A011 Drought-stresse... 341 8e-092
gb|CF760686.1|CF760686 DSAF1_64_F04.b1_A011 Drought-stresse... 341 8e-092
gb|BM331378.1|BM331378 PIC1_65_D07.g1_A002 Pathogen-infecte... 333 2e-089
gb|BM330928.1|BM330928 PIC1_67_C10.g1_A002 Pathogen-infecte... 313 2e-083
gb|CW097693.1|CW097693 104_463_11002604_116_34347_066 Sorgh... 307 1e-081
gb|CB927797.1|CB927797 ABA1_34_F12.b1_A012 Abscisic acid-tr... 301 7e-080
gb|CF758161.1|CF758161 DSAF1_28_C04.g1_A011 Drought-stresse... 301 7e-080
gb|CB929192.1|CB929192 ABA1_40_E05.b1_A012 Abscisic acid-tr... 293 2e-077
gb|CW097694.1|CW097694 104_463_11002604_148_34359_066 Sorgh... 283 2e-074
gb|CW101845.1|CW101845 104_469_11004877_116_34404_049 Sorgh... 254 1e-065
gb|CF756773.1|CF756773 DSAF1_9_A07.g1_A011 Drought-stressed... 222 5e-056
gb|CW027240.1|CW027240 104_253_10498400_114_30531 Sorghum m... 218 8e-055
gb|CW059586.1|CW059586 104_302_10519408_114_30165 Sorghum m... 218 8e-055
gb|CW463841.1|CW463841 fsbb001f212l21f0 Sorghum methylation... 218 8e-055
gb|CW463842.1|CW463842 fsbb001f212l21k0 Sorghum methylation... 218 8e-055
gb|CW027241.1|CW027241 104_253_10498400_116_30528 Sorghum m... 206 3e-051
gb|CW122837.1|CW122837 104_501_11110890_116_34680_065 Sorgh... 206 3e-051
gb|CW286430.1|CW286430 104_764_11410873_116_35515_013 Sorgh... 206 3e-051
gb|CW328627.1|CW328627 104_824_11479407_116_35983_050 Sorgh... 206 3e-051
gb|CW328628.1|CW328628 104_824_11479407_148_35984_050 Sorgh... 167 3e-039
gb|CW122838.1|CW122838 104_501_11110890_148_34676_065 Sorgh... 153 4e-035
gb|CB927880.1|CB927880 ABA1_34_F12.g1_A012 Abscisic acid-tr... 145 1e-032
gb|BE362312.1|BE362312 DG1_85_C11.g1_A002 Dark Grown 1 (DG1... 123 4e-026
gb|CW101846.1|CW101846 104_469_11004877_148_34408_049 Sorgh... 119 6e-025
gb|CF771871.1|CF771871 DSBF1_25_B10.g1_A010 Drought-stresse... 96 8e-018
gb|CW096428.1|CW096428 104_462_11001884_148_34355_080 Sorgh... 84 3e-014
gb|BG560294.1|BG560294 RHIZ2_72_E04.b1_A003 Rhizome2 (RHIZ2... 84 3e-014
gb|CX608242.1|CX608242 ANR1_37_B02.g1_A002 Anaerobic roots ... 84 3e-014
gb|CW354815.1|CW354815 fsbb001f019c24f0 Sorghum methylation... 76 7e-012
gb|CW354816.1|CW354816 fsbb001f019c24k0 Sorghum methylation... 76 7e-012
gb|BE358613.1|BE358613 DG1_30_G06.b1_A002 Dark Grown 1 (DG1... 76 7e-012
gb|CW165227.1|CW165227 104_573_11152394_116_36469_007 Sorgh... 70 5e-010
gb|CW199648.1|CW199648 104_624_11183625_116_37058_033 Sorgh... 70 5e-010
gb|CW199649.1|CW199649 104_624_11183625_148_36850_033 Sorgh... 70 5e-010
gb|CW226511.1|CW226511 104_664_11204925_148_37220_087 Sorgh... 70 5e-010
gb|CW432589.1|CW432589 fsbb001f147g04f0 Sorghum methylation... 70 5e-010
gb|CW286431.1|CW286431 104_764_11410873_148_35519_013 Sorgh... 68 2e-009
gb|CL178228.1|CL178228 104_386_10894419_116_31912_099 Sorgh... 50 4e-004
gb|CW317154.1|CW317154 104_808_11473263_116_35851_050 Sorgh... 50 4e-004
gb|BM324010.1|BM324010 PIC1_30_C03.b1_A002 Pathogen-infecte... 50 4e-004
gb|CF429435.1|CF429435 PH1_21_B01.g1_A002 Phosphorous-defic... 50 4e-004
gb|CW130914.1|CW130914 104_513_11115381_116_34780_085 Sorgh... 48 0.002
gb|CW130915.1|CW130915 104_513_11115381_148_34776_085 Sorgh... 48 0.002
gb|CW176999.1|CW176999 104_590_11158787_116_36594_046 Sorgh... 48 0.002
gb|CW198032.1|CW198032 104_622_11181994_116_36828_037 Sorgh... 48 0.002
gb|CW198033.1|CW198033 104_622_11181994_148_36827_037 Sorgh... 48 0.002
gb|CW362519.1|CW362519 fsbb001f033j18f0 Sorghum methylation... 48 0.002
gb|CW392204.1|CW392204 fsbb001f078l12f0 Sorghum methylation... 48 0.002
gb|CW423631.1|CW423631 fsbb001f133i15f0 Sorghum methylation... 48 0.002
gb|AW282581.1|AW282581 LG1_310_G12.g1_A002 Light Grown 1 (L... 48 0.002
gb|AW284863.1|AW284863 LG1_295_B03.g1_A002 Light Grown 1 (L... 48 0.002
gb|AW564866.1|AW564866 LG1_310_G12.b1_A002 Light Grown 1 (L... 48 0.002
gb|AW565388.1|AW565388 LG1_343_F02.g1_A002 Light Grown 1 (L... 48 0.002
gb|AW679326.1|AW679326 WS1_23_A05.g1_A002 Water-stressed 1 ... 48 0.002
gb|AW745031.1|AW745031 LG1_385_G05.g1_A002 Light Grown 1 (L... 48 0.002
gb|AW747345.1|AW747345 WS1_67_D05.g1_A002 Water-stressed 1 ... 48 0.002
gb|BE126077.1|BE126077 DG1_65_G04.g1_A002 Dark Grown 1 (DG1... 48 0.002
gb|BE352914.1|BE352914 DG1_1_B12.g1_A002 Dark Grown 1 (DG1)... 48 0.002
gb|BE352996.1|BE352996 DG1_2_A12.g1_A002 Dark Grown 1 (DG1)... 48 0.002
gb|BE355123.1|BE355123 DG1_113_E01.g1_A002 Dark Grown 1 (DG... 48 0.002
gb|BE358135.1|BE358135 DG1_24_D11.g1_A002 Dark Grown 1 (DG1... 48 0.002
gb|BE358156.1|BE358156 DG1_24_F12.g1_A002 Dark Grown 1 (DG1... 48 0.002
gb|BE359361.1|BE359361 DG1_40_D04.g1_A002 Dark Grown 1 (DG1... 48 0.002
gb|BE360135.1|BE360135 DG1_61_C01.g1_A002 Dark Grown 1 (DG1... 48 0.002
gb|BE360142.1|BE360142 DG1_61_B01.g1_A002 Dark Grown 1 (DG1... 48 0.002
gb|BE360182.1|BE360182 DG1_61_B01.g2_A002 Dark Grown 1 (DG1... 48 0.002
gb|BE360187.1|BE360187 DG1_61_C01.g2_A002 Dark Grown 1 (DG1... 48 0.002
gb|BE361361.1|BE361361 DG1_71_E06.g1_A002 Dark Grown 1 (DG1... 48 0.002
gb|BE361595.1|BE361595 DG1_72_A12.g1_A002 Dark Grown 1 (DG1... 48 0.002
gb|BE361829.1|BE361829 DG1_82_C01.g1_A002 Dark Grown 1 (DG1... 48 0.002
gb|BE361850.1|BE361850 DG1_82_E01.g1_A002 Dark Grown 1 (DG1... 48 0.002
gb|BE592276.1|BE592276 WS1_90_F07.g1_A002 Water-stressed 1 ... 48 0.002
gb|BG049381.1|BG049381 OV1_19_C02.g1_A002 Ovary 1 (OV1) Sor... 48 0.002
gb|BG323173.1|BG323173 EM1_15_G05.g1_A002 Embryo 1 (EM1) So... 48 0.002
gb|BG605831.1|BG605831 RHIZ2_82_A04.g1_A003 Rhizome2 (RHIZ2... 48 0.002
gb|BG713840.1|BG713840 EM1_20_B02.g2_A002 Embryo 1 (EM1) So... 48 0.002
gb|BI075602.1|BI075602 IP1_22_G05.g1_A002 Immature pannicle... 48 0.002
gb|BE362945.2|BE362945 DG1_91_A04.g1_A002 Dark Grown 1 (DG1... 48 0.002
gb|BM323086.1|BM323086 PIC1_12_D05.b1_A002 Pathogen-infecte... 48 0.002
gb|BM327345.1|BM327345 PIC1_12_D05.g1_A002 Pathogen-infecte... 48 0.002
gb|BM327662.1|BM327662 PIC1_8_G08.g1_A002 Pathogen-infected... 48 0.002
gb|BM329487.1|BM329487 PIC1_38_G01.g1_A002 Pathogen-infecte... 48 0.002
gb|CD209353.1|CD209353 HS1_42_B02.b1_A012 Heat-shocked seed... 48 0.002
gb|CD209449.1|CD209449 HS1_42_B02.g1_A012 Heat-shocked seed... 48 0.002
gb|CD223957.1|CD223957 CCC1_31_E02.b1_A007 Callus culture/c... 48 0.002
gb|CD224067.1|CD224067 CCC1_31_E02.g1_A007 Callus culture/c... 48 0.002
gb|CD228498.1|CD228498 CCC1_8_D09.b1_A007 Callus culture/ce... 48 0.002
gb|CD228611.1|CD228611 CCC1_8_D09.g1_A007 Callus culture/ce... 48 0.002
gb|CD429520.1|CD429520 ETH1_14_G09.b1_A002 Ethylene-treated... 48 0.002
gb|CF429395.1|CF429395 PH1_21_A01.g1_A002 Phosphorous-defic... 48 0.002
gb|CF758805.1|CF758805 DSAF1_36_G08.g1_A011 Drought-stresse... 48 0.002
gb|CN124636.1|CN124636 RHOH1_6_B09.b1_A002 Acid- and alkali... 48 0.002
gb|CN124723.1|CN124723 RHOH1_6_B09.g1_A002 Acid- and alkali... 48 0.002
gb|CN125050.1|CN125050 RHOH1_8_C06.g1_A002 Acid- and alkali... 48 0.002
gb|CN125125.1|CN125125 RHOH1_9_B12.b1_A002 Acid- and alkali... 48 0.002
gb|CN125185.1|CN125185 RHOH1_9_B12.g1_A002 Acid- and alkali... 48 0.002
gb|CN125645.1|CN125645 RHOH1_12_H05.b1_A002 Acid- and alkal... 48 0.002
gb|CN125725.1|CN125725 RHOH1_12_H05.g1_A002 Acid- and alkal... 48 0.002
gb|CN125781.1|CN125781 RHOH1_13_F06.b1_A002 Acid- and alkal... 48 0.002
gb|CN125859.1|CN125859 RHOH1_13_F06.g1_A002 Acid- and alkal... 48 0.002
gb|CN126071.1|CN126071 RHOH1_15_B01.b1_A002 Acid- and alkal... 48 0.002
gb|CN126155.1|CN126155 RHOH1_15_B01.g1_A002 Acid- and alkal... 48 0.002
gb|CN127926.1|CN127926 RHOH1_26_A03.b1_A002 Acid- and alkal... 48 0.002
gb|CN128309.1|CN128309 RHOH1_28_D01.g1_A002 Acid- and alkal... 48 0.002
gb|CN128549.1|CN128549 RHOH1_30_F01.b1_A002 Acid- and alkal... 48 0.002
gb|CN128639.1|CN128639 RHOH1_30_F01.g1_A002 Acid- and alkal... 48 0.002
gb|CN130411.1|CN130411 RHOH1_41_G04.b1_A002 Acid- and alkal... 48 0.002
gb|CN130412.1|CN130412 RHOH1_41_G05.b1_A002 Acid- and alkal... 48 0.002
gb|CN130486.1|CN130486 RHOH1_41_G04.g1_A002 Acid- and alkal... 48 0.002
gb|CN130487.1|CN130487 RHOH1_41_G05.g1_A002 Acid- and alkal... 48 0.002
gb|CN130680.1|CN130680 RHOH1_43_C11.b1_A002 Acid- and alkal... 48 0.002
gb|CN130757.1|CN130757 RHOH1_43_C11.g1_A002 Acid- and alkal... 48 0.002
gb|CN131334.1|CN131334 RHOH1_47_G07.b1_A002 Acid- and alkal... 48 0.002
gb|CN131402.1|CN131402 RHOH1_47_G07.g1_A002 Acid- and alkal... 48 0.002
gb|CN134122.1|CN134122 OX1_20_H09.b1_A002 Oxidatively-stres... 48 0.002
gb|CN135349.1|CN135349 OX1_32_E04.b1_A002 Oxidatively-stres... 48 0.002
gb|CN135828.1|CN135828 OX1_39_E03.b1_A002 Oxidatively-stres... 48 0.002
gb|CN135912.1|CN135912 OX1_39_E03.g1_A002 Oxidatively-stres... 48 0.002
gb|CN136727.1|CN136727 OX1_53_A10.b1_A002 Oxidatively-stres... 48 0.002
gb|CN136815.1|CN136815 OX1_53_A10.g1_A002 Oxidatively-stres... 48 0.002
gb|CN139262.1|CN139262 OX1_21_B06.b1_A002 Oxidatively-stres... 48 0.002
gb|CN139346.1|CN139346 OX1_21_B06.g1_A002 Oxidatively-stres... 48 0.002
gb|CN140891.1|CN140891 OX1_47_G04.g1_A002 Oxidatively-stres... 48 0.002
gb|CN147162.1|CN147162 WOUND1_48_B07.b1_A002 Wounded leaves... 48 0.002
gb|CF675638.1|CF675638 DBP Subtractive cDNA library from so... 48 0.002
gb|CL150597.1|CL150597 104_332_10778647_114_31357_199 Sorgh... 46 0.007
gb|CL150598.1|CL150598 104_332_10778647_116_31358_199 Sorgh... 46 0.007
gb|CW023424.1|CW023424 104_163_10432442_1_30001 Sorghum met... 46 0.007
gb|CW388839.1|CW388839 fsbb001f073m08k0 Sorghum methylation... 46 0.007
gb|CF480696.1|CF480696 POL1_67_G12.b1_A002 Pollen Sorghum b... 46 0.007
gb|CW049146.1|CW049146 104_288_10513852_114_30200 Sorghum m... 44 0.026
gb|CW087468.1|CW087468 104_432_10947651_116_32554_014 Sorgh... 44 0.026
gb|CW087620.1|CW087620 104_432_10947737_114_32552_075 Sorgh... 44 0.026
gb|CW201433.1|CW201433 104_627_11184569_148_37110_075 Sorgh... 44 0.026
gb|CW378344.1|CW378344 fsbb001f057b04f0 Sorghum methylation... 44 0.026
gb|CW378345.1|CW378345 fsbb001f057b04k0 Sorghum methylation... 44 0.026
gb|CW414328.1|CW414328 fsbb001f113o14f0 Sorghum methylation... 44 0.026
gb|CW437841.1|CW437841 fsbb001f155c17f0 Sorghum methylation... 44 0.026
gb|CW489902.1|CW489902 fsbb001f275b13f0 Sorghum methylation... 44 0.026
gb|BE359068.1|BE359068 DG1_38_E04.g1_A002 Dark Grown 1 (DG1... 44 0.026
gb|BE594359.1|BE594359 PI1_32_E03.b2_A002 Pathogen induced ... 44 0.026
gb|BF481136.1|BF481136 FM1_16_G12.b1_A003 Floral-Induced Me... 44 0.026
gb|BI075902.1|BI075902 IP1_22_G05.b1_A002 Immature pannicle... 44 0.026
gb|CN126692.1|CN126692 RHOH1_18_D07.g1_A002 Acid- and alkal... 44 0.026
gb|CL150491.1|CL150491 104_332_10778571_114_31357_123 Sorgh... 42 0.10
gb|CL150492.1|CL150492 104_332_10778571_116_31358_123 Sorgh... 42 0.10
gb|CL152450.1|CL152450 104_335_10779964_114_31363_364 Sorgh... 42 0.10
gb|CL152599.1|CL152599 104_336_10780083_114_31365_099 Sorgh... 42 0.10
gb|CL164770.1|CL164770 104_359_10808136_116_31817_120 Sorgh... 42 0.10
gb|CL178713.1|CL178713 104_387_10894782_116_31906_078 Sorgh... 42 0.10
gb|CW028220.1|CW028220 104_255_10498969_114_30394 Sorghum m... 42 0.10
gb|CW061313.1|CW061313 104_305_10520335_115_30153 Sorghum m... 42 0.10
gb|CW134243.1|CW134243 104_518_11117202_116_34821_073 Sorgh... 42 0.10
gb|CW207534.1|CW207534 104_636_11188196_148_36968_068 Sorgh... 42 0.10
gb|CW253113.1|CW253113 104_716_11224904_116_35103_022 Sorgh... 42 0.10
gb|CW255375.1|CW255375 104_720_11226201_116_35130_047 Sorgh... 42 0.10
gb|CW282675.1|CW282675 104_758_11408836_116_35466_002 Sorgh... 42 0.10
gb|CW282676.1|CW282676 104_758_11408836_148_35470_002 Sorgh... 42 0.10
gb|CW312203.1|CW312203 104_802_11470633_148_35778_015 Sorgh... 42 0.10
gb|CW328526.1|CW328526 104_824_11479349_148_35984_019 Sorgh... 42 0.10
gb|CW366217.1|CW366217 fsbb001f039b21f0 Sorghum methylation... 42 0.10
gb|CW385608.1|CW385608 fsbb001f069c11k0 Sorghum methylation... 42 0.10
gb|BG558699.1|BG558699 RHIZ2_59_D04.g1_A003 Rhizome2 (RHIZ2... 42 0.10
gb|CD209136.1|CD209136 HS1_46_A07.g1_A012 Heat-shocked seed... 42 0.10
gb|CD233698.1|CD233698 SS1_3_H03.g1_A012 Salt-stressed seed... 42 0.10
gb|CD431950.1|CD431950 ETH1_12_F11.b1_A002 Ethylene-treated... 42 0.10
gb|CD432080.1|CD432080 ETH1_12_F11.g1_A002 Ethylene-treated... 42 0.10
gb|CF073179.1|CF073179 FE1_28_F10.g1_A002 Iron-deficient se... 42 0.10
gb|CN143920.1|CN143920 WOUND1_19_D12.b1_A002 Wounded leaves... 42 0.10
gb|CX610906.1|CX610906 ANR1_21_B07.g1_A002 Anaerobic roots ... 42 0.10
gb|CX613562.1|CX613562 GABR1_8_H04.g1_A002 GA- or brassinol... 42 0.10
gb|CX620904.1|CX620904 GABR1_54_F09.g1_A002 GA- or brassino... 42 0.10
gb|BZ628208.1|BZ628208 ih58e11.b1 WGS-SbicolorF (DH5a methy... 40 0.41
gb|CL151689.1|CL151689 104_334_10779432_116_31362_216 Sorgh... 40 0.41
gb|CL155414.1|CL155414 104_341_10782114_116_31472_210 Sorgh... 40 0.41
gb|CL175663.1|CL175663 104_381_10892602_116_31765_202 Sorgh... 40 0.41
gb|CL175664.1|CL175664 104_381_10892602_148_31764_202 Sorgh... 40 0.41
gb|CL179730.1|CL179730 104_389_10895513_148_31907_041 Sorgh... 40 0.41
gb|CL186397.1|CL186397 104_401_10900184_114_32407_028 Sorgh... 40 0.41
gb|CL186398.1|CL186398 104_401_10900184_116_32411_028 Sorgh... 40 0.41
gb|CW039946.1|CW039946 104_272_10505784_115_30390 Sorghum m... 40 0.41
gb|CW046475.1|CW046475 104_283_10510222_114_30137 Sorghum m... 40 0.41
gb|CW073909.1|CW073909 104_341_10782114_114_31471_210 Sorgh... 40 0.41
gb|CW109664.1|CW109664 104_482_11103249_116_34511_047 Sorgh... 40 0.41
gb|CW110015.1|CW110015 104_482_11103451_148_34515_072 Sorgh... 40 0.41
gb|CW115396.1|CW115396 104_490_11106533_116_34590_021 Sorgh... 40 0.41
gb|CW124785.1|CW124785 104_504_11111974_116_34706_083 Sorgh... 40 0.41
gb|CW125238.1|CW125238 104_505_11112225_116_34715_041 Sorgh... 40 0.41
gb|CW147307.1|CW147307 104_540_11139444_116_34999_040 Sorgh... 40 0.41
gb|CW147308.1|CW147308 104_540_11139444_148_34995_040 Sorgh... 40 0.41
gb|CW172974.1|CW172974 104_584_11156590_116_36548_089 Sorgh... 40 0.41
gb|CW187832.1|CW187832 104_607_11172692_116_36724_074 Sorgh... 40 0.41
gb|CW205496.1|CW205496 104_633_11187097_116_36929_001 Sorgh... 40 0.41
gb|CW205497.1|CW205497 104_633_11187097_148_36930_001 Sorgh... 40 0.41
gb|CW211924.1|CW211924 104_642_11190755_116_37014_034 Sorgh... 40 0.41
gb|CW225854.1|CW225854 104_663_11204579_148_37212_038 Sorgh... 40 0.41
gb|CW234716.1|CW234716 104_688_11214177_148_37390_037 Sorgh... 40 0.41
gb|CW239033.1|CW239033 104_697_11217437_148_37507_029 Sorgh... 40 0.41
gb|CW256931.1|CW256931 104_722_11227066_148_35147_043 Sorgh... 40 0.41
gb|CW258958.1|CW258958 104_725_11228162_148_35179_013 Sorgh... 40 0.41
gb|CW261394.1|CW261394 104_728_11229484_148_35173_008 Sorgh... 40 0.41
gb|CW282262.1|CW282262 104_758_11408620_116_35468_012 Sorgh... 40 0.41
gb|CW282263.1|CW282263 104_758_11408620_148_35472_012 Sorgh... 40 0.41
gb|CW308042.1|CW308042 104_796_11468460_148_35739_042 Sorgh... 40 0.41
gb|CW310688.1|CW310688 104_800_11469846_116_35752_031 Sorgh... 40 0.41
gb|CW310689.1|CW310689 104_800_11469846_148_35756_031 Sorgh... 40 0.41
gb|CW335689.1|CW335689 104_834_11483177_116_36084_069 Sorgh... 40 0.41
gb|CW335690.1|CW335690 104_834_11483177_148_36103_069 Sorgh... 40 0.41
gb|CW335691.1|CW335691 104_834_11483178_116_36085_069 Sorgh... 40 0.41
gb|CW335692.1|CW335692 104_834_11483178_148_36102_069 Sorgh... 40 0.41
gb|CW341677.1|CW341677 104_843_11486459_148_36158_044 Sorgh... 40 0.41
gb|CW370077.1|CW370077 fsbb001f044n02f0 Sorghum methylation... 40 0.41
gb|CW437160.1|CW437160 fsbb001f154c05f0 Sorghum methylation... 40 0.41
gb|CW445436.1|CW445436 fsbb001f170j12f0 Sorghum methylation... 40 0.41
gb|CW450168.1|CW450168 fsbb001f188k22f0 Sorghum methylation... 40 0.41
gb|CW455644.1|CW455644 fsbb001f200j20k0 Sorghum methylation... 40 0.41
gb|CW467373.1|CW467373 fsbb001f219a16k0 Sorghum methylation... 40 0.41
gb|CW468596.1|CW468596 fsbb001f220n21k0 Sorghum methylation... 40 0.41
gb|CW469841.1|CW469841 fsbb001f222l21f0 Sorghum methylation... 40 0.41
gb|CW491828.1|CW491828 fsbb001f281n21f0 Sorghum methylation... 40 0.41
gb|CW491989.1|CW491989 fsbb001f282b12f0 Sorghum methylation... 40 0.41
gb|CW496795.1|CW496795 fsbb001f289d15f0 Sorghum methylation... 40 0.41
gb|CW497123.1|CW497123 fsbb001f289l07f0 Sorghum methylation... 40 0.41
gb|AW285995.2|AW285995 LG1_255_H10.b1_A002 Light Grown 1 (L... 40 0.41
gb|AW286821.2|AW286821 LG1_206_H05.b1_A002 Light Grown 1 (L... 40 0.41
gb|AW680698.1|AW680698 WS1_6_H08.g1_A002 Water-stressed 1 (... 40 0.41
gb|AW745748.1|AW745748 WS1_37_D11.b1_A002 Water-stressed 1 ... 40 0.41
gb|AW745854.1|AW745854 WS1_37_D11.g1_A002 Water-stressed 1 ... 40 0.41
gb|BE356423.1|BE356423 DG1_125_B11.b1_A002 Dark Grown 1 (DG... 40 0.41
gb|BE592554.1|BE592554 WS1_94_F08.b1_A002 Water-stressed 1 ... 40 0.41
gb|BF586722.1|BF586722 FM1_31_A09.g1_A003 Floral-Induced Me... 40 0.41
gb|BF587887.1|BF587887 FM1_34_C10.g1_A003 Floral-Induced Me... 40 0.41
gb|BF656433.1|BF656433 FM1_45_G10.g2_A003 Floral-Induced Me... 40 0.41
gb|BG102526.1|BG102526 RHIZ2_34_B09.g1_A003 Rhizome2 (RHIZ2... 40 0.41
gb|BG322543.1|BG322543 EM1_36_C06.b1_A002 Embryo 1 (EM1) So... 40 0.41
gb|BG487553.1|BG487553 EM1_67_D10.b1_A002 Embryo 1 (EM1) So... 40 0.41
gb|BG559802.1|BG559802 RHIZ2_73_H01.g1_A003 Rhizome2 (RHIZ2... 40 0.41
gb|CB927437.1|CB927437 ABA1_25_A04.g1_A012 Abscisic acid-tr... 40 0.41
gb|CD206610.1|CD206610 HS1_23_A05.g1_A012 Heat-shocked seed... 40 0.41
gb|CD230447.1|CD230447 SS1_43_E07.g1_A012 Salt-stressed see... 40 0.41
gb|CF429921.1|CF429921 PH1_25_E06.b1_A002 Phosphorous-defic... 40 0.41
gb|CN131238.1|CN131238 RHOH1_46_E12.g1_A002 Acid- and alkal... 40 0.41
gb|CN150277.1|CN150277 WOUND1_68_D03.b1_A002 Wounded leaves... 40 0.41
gb|CN150359.1|CN150359 WOUND1_68_D03.g1_A002 Wounded leaves... 40 0.41
gb|CX619150.1|CX619150 GABR1_43_F12.g1_A002 GA- or brassino... 40 0.41
gb|DN551915.1|DN551915 pSPR-RT-MR-H2_C07_C283 pSPR Sorghum ... 40 0.41
gb|AF466200.2| Sorghum bicolor putative protein kinase gene... 40 0.41
>gb|CN136044.1|CN136044 OX1_40_A10.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_40_A10_A002 5', mRNA sequence
Length = 833
Score = 1065 bits (537), Expect = 0.0
Identities = 714/774 (92%), Gaps = 12/774 (1%)
Strand = Plus / Minus
Query: 296 gctccacatctttgtaggcgtagttgcaggaataatggatgctctcaatcgcatagtcgt 355
|||||||||||| |||||| ||||||||||||||||| ||||||||||| |||||||| |
Sbjct: 833 gctccacatcttngtaggcatagttgcaggaataatgaatgctctcaattgcatagtcat 774
Query: 356 tcgcgcaggtcgcgtgtttgttcttgcaattttcccagtggacgatgtcgtcagaccatc 415
| || ||||| || |||||||||| ||||||||||||||| || || ||||||||||
Sbjct: 773 ttgcacaggtggcatgtttgttctcgcaattttcccagtgagtaatatcatcagaccatc 714
Query: 416 catctgtaagattcatcttgagagcctctaccatggtatccatgctcttgttgtagaagt 475
|||||||||| ||||||||||||| ||||||||| |||||||||||||| ||||||||||
Sbjct: 713 catctgtaaggttcatcttgagagtctctaccatagtatccatgctcttattgtagaagt 654
Query: 476 ccttgatcgccgtatcaataatgctgacatcccacacgtgatggaggtttgctttcctcc 535
||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 ccttgattgccgtatctataatgctgacatcccacacgtgatggaggtttgctttcctcc 594
Query: 536 ggtaccagtggacggtgatggtgttaccgccctcgtcatcttcgaagcctacgtgcagcg 595
||||||||||||||||||| ||||| ||||| ||||||||||| |||||||| ||||| |
Sbjct: 593 ggtaccagtggacggtgatcgtgttcccgccttcgtcatcttcaaagcctacatgcagtg 534
Query: 596 gctggtggacgtcgccgacgaagtgtgccaggaacatcaggctctccgtcaggttatacg 655
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 533 gctggtggacgtcgccgacaaaatgtgccaggaacatcaggctctccgtcaggttatacg 474
Query: 656 aagtcttctggccgtagctgtagagctggtccgtgtagttgttgatagccccgacgacgc 715
||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 473 aagtcttctggccatagctgtagagctggtcagtgtagttgttgatagccccgacgacgc 414
Query: 716 acatcccttgctggccacgagaattgtggcagtcccgagaatacttgaagttgcagactt 775
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 413 acatcccttgctggccacgagaattgtggcaatcccgagagtacttgaagttgcagactt 354
Query: 776 ggggggtgttggcgtagtggagcgggctggcccagtggtagtgccagcgcacctggtccg 835
| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 353 gaggggtgttgacgtagtggagcgggctggcccagtggtagtgccagcgcaccgtgtccg 294
Query: 836 cccacgggcacaccgtcgacagctccccgcccgccgactccggcagcagcgcctgcaccg 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 cccacgggcacaccgtcgacagctccccgcccgccgactccggcagcagcgcctgcaccg 234
Query: 896 ccgccgccgccttctccgacaggtacttctcggcgatcttgcagaccatgatgtggccct 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 ccgccgccgccttctccgacaggtacttctcggcgatcttgcagaccatgatgtggccct 174
Query: 956 cctttccccacgcgccggcgaggggcggggcaaggaggagg------aggaggaagacga 1009
|||| ||||||||| ||||| |||| ||| | | ||||||| |||||||||||||
Sbjct: 173 ccttgccccacgcgtcggcgcggggtgggacgacgaggaggaggaggaggaggaagacga 114
Query: 1010 gtgggaacaggagcagcgcccgctgctggtggtggggcgccatgtctctctgct 1063
|||||||| |||||||| ||||| ||||||||||||||||| |||||||
Sbjct: 113 gtgggaacgggagcagcacccgc------tggtggggcgccatgtccctctgct 66
>gb|CF434042.1|CF434042 NIT1_31_B05.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor cDNA
clone NIT1_31_B05_A002 5', mRNA sequence
Length = 803
Score = 1021 bits (515), Expect = 0.0
Identities = 687/745 (92%), Gaps = 12/745 (1%)
Strand = Plus / Minus
Query: 325 gaataatggatgctctcaatcgcatagtcgttcgcgcaggtcgcgtgtttgttcttgcaa 384
|||||||| ||||||||||| |||||||| || || ||||| || |||||||||| ||||
Sbjct: 803 gaataatgaatgctctcaattgcatagtcatttgcacaggtggcatgtttgttctcgcaa 744
Query: 385 ttttcccagtggacgatgtcgtcagaccatccatctgtaagattcatcttgagagcctct 444
||||||||||| || || |||||||||||||||||||| ||||||||||||| ||||
Sbjct: 743 ttttcccagtgagtaatatcatcagaccatccatctgtaaggttcatcttgagagtctct 684
Query: 445 accatggtatccatgctcttgttgtagaagtccttgatcgccgtatcaataatgctgaca 504
||||| |||||||||||||| ||||||||||||||||| |||||||| ||||||||||||
Sbjct: 683 accatagtatccatgctcttattgtagaagtccttgattgccgtatctataatgctgaca 624
Query: 505 tcccacacgtgatggaggtttgctttcctccggtaccagtggacggtgatggtgttaccg 564
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 623 tcccacacgtgatggaggtttgctttcctccggtaccagtggacggtgatcgtgttcccg 564
Query: 565 ccctcgtcatcttcgaagcctacgtgcagcggctggtggacgtcgccgacgaagtgtgcc 624
|| ||||||||||| |||||||| ||||| |||||||||||||||||||| || ||||||
Sbjct: 563 ccttcgtcatcttcaaagcctacatgcagtggctggtggacgtcgccgacaaaatgtgcc 504
Query: 625 aggaacatcaggctctccgtcaggttatacgaagtcttctggccgtagctgtagagctgg 684
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 503 aggaacatcaggctctccgtcaggttatacgaagtcttctggccatagctgtagagctgg 444
Query: 685 tccgtgtagttgttgatagccccgacgacgcacatcccttgctggccacgagaattgtgg 744
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tcagtgtagttgttgatagccccgacgacgcacatcccttgctggccacgagaattgtgg 384
Query: 745 cagtcccgagaatacttgaagttgcagacttggggggtgttggcgtagtggagcgggctg 804
|| |||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 383 caatcccgagagtacttgaagttgcagacttgaggggtgttgacgtagtggagcgggctg 324
Query: 805 gcccagtggtagtgccagcgcacctggtccgcccacgggcacaccgtcgacagctccccg 864
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 323 gcccagtggtagtgccagcgcaccgtgtccgcccacgggcacaccgtcgacagctccccg 264
Query: 865 cccgccgactccggcagcagcgcctgcaccgccgccgccgccttctccgacaggtacttc 924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cccgccgactccggcagcagcgcctgcaccgccgccgccgccttctccgacaggtacttc 204
Query: 925 tcggcgatcttgcagaccatgatgtggccctcctttccccacgcgccggcgaggggcggg 984
||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||| |||
Sbjct: 203 tcggcgatcttgcagaccatgatgtggccctccttgccccacgcgtcggcgcggggtggg 144
Query: 985 gcaaggaggaggagg------aggaagacgagtgggaacaggagcagcgcccgctgctgg 1038
| | |||||||||| |||||||||||||||||| |||||||| |||||
Sbjct: 143 acgacgaggaggaggaggaggaggaagacgagtgggaacgggagcagcacccgc------ 90
Query: 1039 tggtggggcgccatgtctctctgct 1063
||||||||||||||||| |||||||
Sbjct: 89 tggtggggcgccatgtccctctgct 65
>gb|CN139909.1|CN139909 OX1_24_H06.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_24_H06_A002 5', mRNA sequence
Length = 732
Score = 963 bits (486), Expect = 0.0
Identities = 619/664 (93%), Gaps = 12/664 (1%)
Strand = Plus / Minus
Query: 406 tcagaccatccatctgtaagattcatcttgagagcctctaccatggtatccatgctcttg 465
|||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||
Sbjct: 722 tcagaccatccatctgtaaggttcatcttgagagtctctaccatagtatccatgctctta 663
Query: 466 ttgtagaagtccttgatcgccgtatcaataatgctgacatcccacacgtgatggaggttt 525
||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 662 ttgtagaagtccttgattgccgtatctataatgctgacatcccacacgtgatggaggttt 603
Query: 526 gctttcctccggtaccagtggacggtgatggtgttaccgccctcgtcatcttcgaagcct 585
||||||||||||||||||||||||||||| ||||| ||||| ||||||||||| ||||||
Sbjct: 602 gctttcctccggtaccagtggacggtgatcgtgttcccgccttcgtcatcttcaaagcct 543
Query: 586 acgtgcagcggctggtggacgtcgccgacgaagtgtgccaggaacatcaggctctccgtc 645
|| ||||| |||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 542 acatgcagtggctggtggacgtcgccgacaaaatgtgccaggaacatcaggctctccgtc 483
Query: 646 aggttatacgaagtcttctggccgtagctgtagagctggtccgtgtagttgttgatagcc 705
||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||
Sbjct: 482 aggttatacgaagtcttctggccatagctgtagagctggtcagtgtaattgttgatagcc 423
Query: 706 ccgacgacgcacatcccttgctggccacgagaattgtggcagtcccgagaatacttgaag 765
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 422 ccgacgacgcacatcccttgctggccacgagaattgtggcaatcccgagagtacttgaag 363
Query: 766 ttgcagacttggggggtgttggcgtagtggagcgggctggcccagtggtagtgccagcgc 825
||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ttgcagacttgaggggtgttgacgtagtggagcgggctggcccagtggtagtgccagcgc 303
Query: 826 acctggtccgcccacgggcacaccgtcgacagctccccgcccgccgactccggcagcagc 885
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 accgtgtccgcccacgggcacaccgtcgacagctccccgcccgccgactccggcagcagc 243
Query: 886 gcctgcaccgccgccgccgccttctccgacaggtacttctcggcgatcttgcagaccatg 945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gcctgcaccgccgccgccgccttctccgacaggtacttctcggcgatcttgcagaccatg 183
Query: 946 atgtggccctcctttccccacgcgccggcgaggggcggggcaaggaggaggagg------ 999
|||||||||||||| ||||||||| ||||| |||| ||| | | ||||||||||
Sbjct: 182 atgtggccctccttgccccacgcgtcggcgcggggtgggacgacgaggaggaggaggagg 123
Query: 1000 aggaagacgagtgggaacaggagcagcgcccgctgctggtggtggggcgccatgtctctc 1059
|||||||||||||||||| |||||||| ||||| ||||||||||||||||| |||
Sbjct: 122 aggaagacgagtgggaacgggagcagcacccgc------tggtggggcgccatgtccctc 69
Query: 1060 tgct 1063
||||
Sbjct: 68 tgct 65
>gb|BE362217.1|BE362217 DG1_85_A11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 586
Score = 868 bits (438), Expect = 0.0
Identities = 549/586 (93%)
Strand = Plus / Minus
Query: 303 atctttgtaggcgtagttgcaggaataatggatgctctcaatcgcatagtcgttcgcgca 362
|||||||||||| ||||||||||||||||| ||||||||||| |||||||| || || ||
Sbjct: 586 atctttgtaggcatagttgcaggaataatgaatgctctcaattgcatagtcatttgcaca 527
Query: 363 ggtcgcgtgtttgttcttgcaattttcccagtggacgatgtcgtcagaccatccatctgt 422
||| || |||||||||| ||||||||||||||| || || |||||||||||||||||
Sbjct: 526 ggtggcatgtttgttctcgcaattttcccagtgagtaatatcatcagaccatccatctgt 467
Query: 423 aagattcatcttgagagcctctaccatggtatccatgctcttgttgtagaagtccttgat 482
||| ||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 466 aaggttcatcttgagagtctctaccatagtatccatgctcttattgtagaagtccttgat 407
Query: 483 cgccgtatcaataatgctgacatcccacacgtgatggaggtttgctttcctccggtacca 542
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 tgccgtatctataatgctgacatcccacacgtgatggaggtttgctttcctccggtacca 347
Query: 543 gtggacggtgatggtgttaccgccctcgtcatcttcgaagcctacgtgcagcggctggtg 602
|||||||||||| ||||| ||||| ||||||||||| |||||||| ||||| ||||||||
Sbjct: 346 gtggacggtgatcgtgttcccgccttcgtcatcttcaaagcctacatgcagtggctggtg 287
Query: 603 gacgtcgccgacgaagtgtgccaggaacatcaggctctccgtcaggttatacgaagtctt 662
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gacgtcgccgacaaaatgtgccaggaacatcaggctctccgtcaggttatacgaagtctt 227
Query: 663 ctggccgtagctgtagagctggtccgtgtagttgttgatagccccgacgacgcacatccc 722
|||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 226 ctggccatagctgtagagctggtcagtgtagttgttgatagccccgacgacgcacatccc 167
Query: 723 ttgctggccacgagaattgtggcagtcccgagaatacttgaagttgcagacttggggggt 782
|||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||
Sbjct: 166 ttgctggccacgagaattgtggcaatcccgagagtacttgaagttgcagacttgaggggt 107
Query: 783 gttggcgtagtggagcgggctggcccagtggtagtgccagcgcacctggtccgcccacgg 842
|||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 106 gttgacgtagtggagcgggctggcccagtggtagtgccagcgcaccgtgtccgcccacgg 47
Query: 843 gcacaccgtcgacagctccccgcccgccgactccggcagcagcgcc 888
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 gcacaccgtcgacagctccccgcccgccgactccggcagcagcgcc 1
>gb|CD222546.1|CD222546 CCC1_22_B05.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_22_B05_A007 5', mRNA sequence
Length = 646
Score = 839 bits (423), Expect = 0.0
Identities = 538/577 (93%), Gaps = 12/577 (2%)
Strand = Plus / Minus
Query: 493 ataatgctgacatcccacacgtgatggaggtttgctttcctccggtaccagtggacggtg 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 ataatgctgacatcccacacgtgatggaggtttgctttcctccggtaccagtggacggtg 584
Query: 553 atggtgttaccgccctcgtcatcttcgaagcctacgtgcagcggctggtggacgtcgccg 612
|| ||||| ||||| ||||||||||| |||||||| ||||| ||||||||||||||||||
Sbjct: 583 atcgtgttcccgccttcgtcatcttcaaagcctacatgcagtggctggtggacgtcgccg 524
Query: 613 acgaagtgtgccaggaacatcaggctctccgtcaggttatacgaagtcttctggccgtag 672
|| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 523 acaaaatgtgccaggaacatcaggctctccgtcaggttatacgaagtcttctggccatag 464
Query: 673 ctgtagagctggtccgtgtagttgttgatagccccgacgacgcacatcccttgctggcca 732
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 ctgtagagctggtcagtgtagttgttgatagccccgacgacgcacatcccttgctggcca 404
Query: 733 cgagaattgtggcagtcccgagaatacttgaagttgcagacttggggggtgttggcgtag 792
|||||||||||||| |||||||| ||||||||| |||||||||| ||||||||| |||||
Sbjct: 403 cgagaattgtggcaatcccgagagtacttgaagctgcagacttgaggggtgttgacgtag 344
Query: 793 tggagcgggctggcccagtggtagtgccagcgcacctggtccgcccacgggcacaccgtc 852
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 343 tggagcgggctggcccagtggtagtgccagcgcaccgtgtccgcccacgggcacaccgtc 284
Query: 853 gacagctccccgcccgccgactccggcagcagcgcctgcaccgccgccgccgccttctcc 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 gacagctccccgcccgccgactccggcagcagcgcctgcaccgccgccgccgccttctcc 224
Query: 913 gacaggtacttctcggcgatcttgcagaccatgatgtggccctcctttccccacgcgccg 972
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 223 gacaggtacttctcggcgatcttgcagaccatgatgtggccctccttgccccacgcgtcg 164
Query: 973 gcgaggggcggggcaaggaggaggagg------aggaagacgagtgggaacaggagcagc 1026
||| |||| ||| | | |||||||||| |||||||||||||||||| ||||||||
Sbjct: 163 gcgcggggtgggacgacgaggaggaggaggaggaggaagacgagtgggaacgggagcagc 104
Query: 1027 gcccgctgctggtggtggggcgccatgtctctctgct 1063
||||| ||||||||||||||||| |||||||
Sbjct: 103 acccgc------tggtggggcgccatgtccctctgct 73
>gb|CD223674.1|CD223674 CCC1_29_D06.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_29_D06_A007 5', mRNA sequence
Length = 653
Score = 839 bits (423), Expect = 0.0
Identities = 538/577 (93%), Gaps = 12/577 (2%)
Strand = Plus / Minus
Query: 493 ataatgctgacatcccacacgtgatggaggtttgctttcctccggtaccagtggacggtg 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 ataatgctgacatcccacacgtgatggaggtttgctttcctccggtaccagtggacggtg 592
Query: 553 atggtgttaccgccctcgtcatcttcgaagcctacgtgcagcggctggtggacgtcgccg 612
|| ||||| ||||| ||||||||||| |||||||| ||||| ||||||||||||||||||
Sbjct: 591 atcgtgttcccgccttcgtcatcttcaaagcctacatgcagtggctggtggacgtcgccg 532
Query: 613 acgaagtgtgccaggaacatcaggctctccgtcaggttatacgaagtcttctggccgtag 672
|| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 531 acaaaatgtgccaggaacatcaggctctccgtcaggttatacgaagtcttctggccatag 472
Query: 673 ctgtagagctggtccgtgtagttgttgatagccccgacgacgcacatcccttgctggcca 732
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 ctgtagagctggtcagtgtagttgttgatagccccgacgacgcacatcccttgctggcca 412
Query: 733 cgagaattgtggcagtcccgagaatacttgaagttgcagacttggggggtgttggcgtag 792
|||||||||||||| |||||||| |||||||||||||||||||| ||||||||| |||||
Sbjct: 411 cgagaattgtggcaatcccgagagtacttgaagttgcagacttgaggggtgttgacgtag 352
Query: 793 tggagcgggctggcccagtggtagtgccagcgcacctggtccgcccacgggcacaccgtc 852
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 351 tggagcgggctggcccagtggtagtgccagcgcaccgtgtccgcccacgggcacaccgtc 292
Query: 853 gacagctccccgcccgccgactccggcagcagcgcctgcaccgccgccgccgccttctcc 912
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 gacaactccccgcccgccgactccggcagcagcgcctgcaccgccgccgccgccttctcc 232
Query: 913 gacaggtacttctcggcgatcttgcagaccatgatgtggccctcctttccccacgcgccg 972
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 231 gacaggtacttctcggcgatcttgcagaccatgatgtggccctccttgccccacgcgtcg 172
Query: 973 gcgaggggcggggcaaggaggaggagg------aggaagacgagtgggaacaggagcagc 1026
||| |||| ||| | | |||||||||| |||||||||||||||||| ||||||||
Sbjct: 171 gcgcggggtgggacgacgaggaggaggaggaggaggaagacgagtgggaacgggagcagc 112
Query: 1027 gcccgctgctggtggtggggcgccatgtctctctgct 1063
||||| ||||||||||||||||| |||||||
Sbjct: 111 acccgc------tggtggggcgccatgtccctctgct 81
>gb|BG560428.1|BG560428 RHIZ2_74_C05.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 544
Score = 700 bits (353), Expect = 0.0
Identities = 436/465 (93%), Gaps = 9/465 (1%)
Strand = Plus / Minus
Query: 604 acgtcgccgacgaagtgtgccaggaacatcaggctctccgtcaggttatacgaagtcttc 663
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 acgtcgccgacaaaatgtgccaggaacatcaggctctccgtcaggttatacgaagtcttc 485
Query: 664 tggccgtagctgtagagctggtccgtgtagttgttgatagccccgacgacgcacatccct 723
||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 484 tggccatagctgtagagctggtcagtgtagttgttgatagccccgacgacgcacatccct 425
Query: 724 tgctggccacgagaattgtggcagtcccgagaatacttgaagttgcagacttggggggtg 783
||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||
Sbjct: 424 tgctggccacgagaattgtggcaatcccgagagtacttgaagttgcagacttgaggggtg 365
Query: 784 ttggcgtagtggagcgggctggcccagtggtagtgccagcgcacctggtccgcccacggg 843
||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct: 364 ttgacgtagtggagcgggcttgcccagtggtagtgccagcgcaccgtgtccgcccacggg 305
Query: 844 cacaccgtcgacagctccccgcccgccgactccggcagcagcgcctgcaccgccgccgcc 903
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 304 cacaccgtcgacagctccccacccgccgactccggcagcagcgcctgcaccgccgccgcc 245
Query: 904 gccttctccgacaggtacttctcggcgatcttgcagaccatgatgtggccctcctttccc 963
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 244 gccttctccgacaggtacttctcggcgatcttgcagaccatgatgtggccctccttgccc 185
Query: 964 cacgcgccggcgaggggcggggcaaggaggaggaggag---------gaagacgagtggg 1014
|||||| ||||| |||||||||| | |||||||||||| |||||||||||||
Sbjct: 184 cacgcgtcggcgcggggcggggcgacgaggaggaggaggaggaggaagaagacgagtggg 125
Query: 1015 aacaggagcagcgcccgctgctggtggtggggcgccatgtctctc 1059
||| |||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 124 aacgggagcagcccccgctggtggtggtggggcgccatgtctctc 80
>gb|BG559840.1|BG559840 RHIZ2_74_C05.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 536
Score = 620 bits (313), Expect = e-176
Identities = 458/505 (90%), Gaps = 1/505 (0%)
Strand = Plus / Minus
Query: 101 aatggacaaatccttgtaatagctatgcttcctttt-attagagctgttactgtacttgt 159
||||||| ||||||||||||||||||||||| |||| |||| | ||||||||||||| ||
Sbjct: 505 aatggaccaatccttgtaatagctatgcttctttttcattacaactgttactgtactcgt 446
Query: 160 agtggtatatcatccgcttcacctccaccaaatatccgattaagtaccaacgccaatctg 219
|||||||||||||| |||| | | ||| |||| ||||||||||||| |||||||| ||||
Sbjct: 445 agtggtatatcatctgctttatccccatcaaagatccgattaagtatcaacgccagtctg 386
Query: 220 attccagcctgcgctaacctcttctccacaatcgggtacctactgaaaaaataatcatct 279
||||||||||| ||||| |||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 385 attccagcctgtgctaatctcttctccacaatcgggtatctagtgaaaaaataatcatct 326
Query: 280 cctagagtgatgtcttgctccacatctttgtaggcgtagttgcaggaataatggatgctc 339
|||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 325 cctagagtaatgccttgctccacatctttgtaggcatagttgcaggaataatgaatgctc 266
Query: 340 tcaatcgcatagtcgttcgcgcaggtcgcgtgtttgttcttgcaattttcccagtggacg 399
|||||||||||||| || || ||||| || |||||||||| |||||||||||||||
Sbjct: 265 tcaatcgcatagtcatttgcacaggtggcatgtttgttctcgcaattttcccagtgagta 206
Query: 400 atgtcgtcagaccatccatctgtaagattcatcttgagagcctctaccatggtatccatg 459
|| || |||||||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 205 atatcatcagaccatccatctgtaagattcatcttgagagtctctaccatagtatccatg 146
Query: 460 ctcttgttgtagaagtccttgatcgccgtatcaataatgctgacatcccacacgtgatgg 519
||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 145 ctcttattgtagaagtccttgattgccgtatctataatgctgacatcccacacgtgatgg 86
Query: 520 aggtttgctttcctccggtaccagtggacggtgatggtgttaccgccctcgtcatcttcg 579
||||||||||||||||||||||| ||||||||||| || || |||||||| ||||||||
Sbjct: 85 aggtttgctttcctccggtaccaatggacggtgatcgtattcccgccctcatcatcttca 26
Query: 580 aagcctacgtgcagcggctggtgga 604
|||||||| ||||| ||||||||||
Sbjct: 25 aagcctacatgcagtggctggtgga 1
>gb|CN139828.1|CN139828 OX1_24_H06.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_24_H06_A002 3', mRNA sequence
Length = 657
Score = 620 bits (313), Expect = e-176
Identities = 458/505 (90%), Gaps = 1/505 (0%)
Strand = Plus / Minus
Query: 101 aatggacaaatccttgtaatagctatgcttcctttt-attagagctgttactgtacttgt 159
||||||| ||||||||||||||||||||||| |||| |||| | ||||||||||||| ||
Sbjct: 505 aatggaccaatccttgtaatagctatgcttctttttcattacaactgttactgtactcgt 446
Query: 160 agtggtatatcatccgcttcacctccaccaaatatccgattaagtaccaacgccaatctg 219
|||||||||||||| |||| | | ||| |||| ||||||||||||| |||||||| ||||
Sbjct: 445 agtggtatatcatctgctttatccccatcaaagatccgattaagtatcaacgccagtctg 386
Query: 220 attccagcctgcgctaacctcttctccacaatcgggtacctactgaaaaaataatcatct 279
||||||||||| ||||| |||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 385 attccagcctgtgctaatctcttctccacaatcgggtatctagtgaaaaaataatcatct 326
Query: 280 cctagagtgatgtcttgctccacatctttgtaggcgtagttgcaggaataatggatgctc 339
|||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 325 cctagagtaatgccttgctccacatctttgtaggcatagttgcaggaataatgaatgctc 266
Query: 340 tcaatcgcatagtcgttcgcgcaggtcgcgtgtttgttcttgcaattttcccagtggacg 399
||||| |||||||| || || ||||| || |||||||||| |||||||||||||||
Sbjct: 265 tcaattgcatagtcatttgcacaggtggcatgtttgttctcgcaattttcccagtgagta 206
Query: 400 atgtcgtcagaccatccatctgtaagattcatcttgagagcctctaccatggtatccatg 459
|| || |||||||||||||||||||| ||||||||||||| ||||||||| |||||||||
Sbjct: 205 atatcatcagaccatccatctgtaaggttcatcttgagagtctctaccatagtatccatg 146
Query: 460 ctcttgttgtagaagtccttgatcgccgtatcaataatgctgacatcccacacgtgatgg 519
||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 145 ctcttattgtagaagtccttgattgccgtatctataatgctgacatcccacacgtgatgg 86
Query: 520 aggtttgctttcctccggtaccagtggacggtgatggtgttaccgccctcgtcatcttcg 579
||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||
Sbjct: 85 aggtttgctttcctccggtaccagtggacggtgatcgtgttcccgccttcgtcatcttca 26
Query: 580 aagcctacgtgcagcggctggtgga 604
|||||||| ||||| ||||||||||
Sbjct: 25 aagcctacatgcagtggctggtgga 1
Score = 40.1 bits (20), Expect = 0.41
Identities = 36/40 (90%), Gaps = 1/40 (2%)
Strand = Plus / Minus
Query: 22 ttacaaattcatgc-caatttattgatgtatagcaatgga 60
|||||||||||||| |||||||||| |||||| ||||||
Sbjct: 539 ttacaaattcatgctaaatttattgaagtataggaatgga 500
>gb|BE362325.1|BE362325 DG1_85_A11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 559
Score = 618 bits (312), Expect = e-175
Identities = 457/504 (90%), Gaps = 1/504 (0%)
Strand = Plus / Minus
Query: 101 aatggacaaatccttgtaatagctatgcttcctttt-attagagctgttactgtacttgt 159
||||||| ||||||||||||||||||||||| |||| |||| | ||||||||||||| ||
Sbjct: 504 aatggaccaatccttgtaatagctatgcttctttttcattacaactgttactgtactcgt 445
Query: 160 agtggtatatcatccgcttcacctccaccaaatatccgattaagtaccaacgccaatctg 219
|||||||||||||| |||| | | ||| |||| ||||||||||||| |||||||| ||||
Sbjct: 444 agtggtatatcatctgctttatccccatcaaagatccgattaagtatcaacgccagtctg 385
Query: 220 attccagcctgcgctaacctcttctccacaatcgggtacctactgaaaaaataatcatct 279
||||||||||| ||||| |||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 384 attccagcctgtgctaatctcttctccacaatcgggtatctagtgaaaaaataatcatct 325
Query: 280 cctagagtgatgtcttgctccacatctttgtaggcgtagttgcaggaataatggatgctc 339
|||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 324 cctagagtaatgccttgctccacatctttgtaggcatagttgcaggaataatgaatgctc 265
Query: 340 tcaatcgcatagtcgttcgcgcaggtcgcgtgtttgttcttgcaattttcccagtggacg 399
||||| |||||||| || || ||||| || |||||||||| |||||||||||||||
Sbjct: 264 tcaattgcatagtcatttgcacaggtggcatgtttgttctcgcaattttcccagtgagta 205
Query: 400 atgtcgtcagaccatccatctgtaagattcatcttgagagcctctaccatggtatccatg 459
|| || |||||||||||||||||||| ||||||||||||| ||||||||| |||||||||
Sbjct: 204 atatcatcagaccatccatctgtaaggttcatcttgagagtctctaccatagtatccatg 145
Query: 460 ctcttgttgtagaagtccttgatcgccgtatcaataatgctgacatcccacacgtgatgg 519
||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 144 ctcttattgtagaagtccttgattgccgtatctataatgctgacatcccacacgtgatgg 85
Query: 520 aggtttgctttcctccggtaccagtggacggtgatggtgttaccgccctcgtcatcttcg 579
||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||
Sbjct: 84 aggtttgctttcctccggtaccagtggacggtgatcgtgttcccgccttcgtcatcttca 25
Query: 580 aagcctacgtgcagcggctggtgg 603
|||||||| ||||| |||||||||
Sbjct: 24 aagcctacatgcagtggctggtgg 1
>gb|CN135961.1|CN135961 OX1_40_A10.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_40_A10_A002 3', mRNA sequence
Length = 762
Score = 611 bits (308), Expect = e-173
Identities = 453/500 (90%), Gaps = 1/500 (0%)
Strand = Plus / Minus
Query: 101 aatggacaaatccttgtaatagctatgcttcctttt-attagagctgttactgtacttgt 159
||||||| ||||||||||||||||||||||| |||| |||| | ||||||||||||| ||
Sbjct: 500 aatggaccaatccttgtaatagctatgcttctttttcattacaactgttactgtactcgt 441
Query: 160 agtggtatatcatccgcttcacctccaccaaatatccgattaagtaccaacgccaatctg 219
|||||||||||||| |||| | | ||| |||| ||||||||||||| |||||||| ||||
Sbjct: 440 agtggtatatcatctgctttatccccatcaaagatccgattaagtatcaacgccagtctg 381
Query: 220 attccagcctgcgctaacctcttctccacaatcgggtacctactgaaaaaataatcatct 279
||||||||||| ||||| |||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 380 attccagcctgtgctaatctcttctccacaatcgggtatctagtgaaaaaataatcatct 321
Query: 280 cctagagtgatgtcttgctccacatctttgtaggcgtagttgcaggaataatggatgctc 339
|||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 320 cctagagtaatgccttgctccacatctttgtaggcatagttgcaggaataatgaatgctc 261
Query: 340 tcaatcgcatagtcgttcgcgcaggtcgcgtgtttgttcttgcaattttcccagtggacg 399
||||| |||||||| || || ||||| || |||||||||| |||||||||||||||
Sbjct: 260 tcaattgcatagtcatttgcacaggtggcatgtttgttctcgcaattttcccagtgagta 201
Query: 400 atgtcgtcagaccatccatctgtaagattcatcttgagagcctctaccatggtatccatg 459
|| || |||||||||||||||||||| ||||||||||||| ||||||||| |||||||||
Sbjct: 200 atatcatcagaccatccatctgtaaggttcatcttgagagtctctaccatagtatccatg 141
Query: 460 ctcttgttgtagaagtccttgatcgccgtatcaataatgctgacatcccacacgtgatgg 519
||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 140 ctcttattgtagaagtccttgattgccgtatctataatgctgacatcccacacgtgatgg 81
Query: 520 aggtttgctttcctccggtaccagtggacggtgatggtgttaccgccctcgtcatcttcg 579
||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||
Sbjct: 80 aggtttgctttcctccggtaccagtggacggtgatcgtgttcccgccttcgtcatcttca 21
Query: 580 aagcctacgtgcagcggctg 599
|||||||| ||||| |||||
Sbjct: 20 aagcctacatgcagtggctg 1
Score = 40.1 bits (20), Expect = 0.41
Identities = 36/40 (90%), Gaps = 1/40 (2%)
Strand = Plus / Minus
Query: 22 ttacaaattcatgc-caatttattgatgtatagcaatgga 60
|||||||||||||| |||||||||| |||||| ||||||
Sbjct: 534 ttacaaattcatgctaaatttattgaagtataggaatgga 495
>gb|CB929208.1|CB929208 ABA1_40_E05.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_40_E05_A012 5', mRNA sequence
Length = 478
Score = 559 bits (282), Expect = e-157
Identities = 382/417 (91%), Gaps = 12/417 (2%)
Strand = Plus / Minus
Query: 653 acgaagtcttctggccgtagctgtagagctggtccgtgtagttgttgatagccccgacga 712
|||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 478 acgaagtcttctggccatagctgtagagctggtcagtgtagttgttgatagccccgtcga 419
Query: 713 cgcacatcccttgctggccacgagaattgtggcagtcccgagaatacttgaagttgcaga 772
|||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 418 cgcacatcccttgctgtccacgagaattgtggcaatcccgagagtacttgaagttgcaga 359
Query: 773 cttggggggtgttggcgtagtggagcgggctggcccagtggtagtgccagcgcacctggt 832
|||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 358 cttgaggggtgttgacgtagtggagcgggctggcccagtggtagtgccagcgcaccgtgt 299
Query: 833 ccgcccacgggcacaccgtcgacagctccccgcccgccgactccggcagcagcgcctgca 892
|||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 298 ccgcccacgggcacnccgtngncagctccccgcccgccgactccggcagcagcgcctgca 239
Query: 893 ccgccgccgccgccttctccgacaggtacttctcggcgatcttgcagaccatgatgtggc 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 ccgccgccgccgccttctccgacaggtacttctcggcgatcttgcagaccatgatgtggc 179
Query: 953 cctcctttccccacgcgccggcgaggggcggggcaaggaggaggag------gaggaaga 1006
||||||| ||||||||| ||||| |||| ||| | | ||||||||| ||||||||
Sbjct: 178 cctccttgccccacgcgtcggcgcggggtgggacgacgaggaggaggaggaggaggaaga 119
Query: 1007 cgagtgggaacaggagcagcgcccgctgctggtggtggggcgccatgtctctctgct 1063
||||||||||| |||||||| ||||| ||||||||||||||||| |||||||
Sbjct: 118 cgagtgggaacgggagcagcacccgc------tggtggggcgccatgtccctctgct 68
>gb|BG357936.1|BG357936 OV2_32_B07.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 433
Score = 555 bits (280), Expect = e-156
Identities = 365/394 (92%), Gaps = 12/394 (3%)
Strand = Plus / Minus
Query: 676 tagagctggtccgtgtagttgttgatagccccgacgacgcacatcccttgctggccacga 735
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tagagctggtcagtgtagttgttgatagccccgacgacgcacatcccttgctggccacga 374
Query: 736 gaattgtggcagtcccgagaatacttgaagttgcagacttggggggtgttggcgtagtgg 795
||||||||||| |||||||| |||||||||||||||||||| ||||||||| ||||||||
Sbjct: 373 gaattgtggcaatcccgagagtacttgaagttgcagacttgaggggtgttgacgtagtgg 314
Query: 796 agcgggctggcccagtggtagtgccagcgcacctggtccgcccacgggcacaccgtcgac 855
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 313 agcgggctggcccagtggtagtgccagcgcaccgtgtccgcccacgggcacaccgtcgac 254
Query: 856 agctccccgcccgccgactccggcagcagcgcctgcaccgccgccgccgccttctccgac 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 agctccccgcccgccgactccggcagcagcgcctgcaccgccgccgccgccttctccgac 194
Query: 916 aggtacttctcggcgatcttgcagaccatgatgtggccctcctttccccacgcgccggcg 975
|||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 193 aggtacttctcggcgatcttgcagaccatgatgtggccctccttgccccacgcgtcggcg 134
Query: 976 aggggcggggcaaggaggagg------aggaggaagacgagtgggaacaggagcagcgcc 1029
|||| ||| | | ||||||| ||||||||||||||||||||| |||||||| ||
Sbjct: 133 cggggtgggacgacgaggaggaggaggaggaggaagacgagtgggaacgggagcagcacc 74
Query: 1030 cgctgctggtggtggggcgccatgtctctctgct 1063
||| ||||||||||||||||| |||||||
Sbjct: 73 cgc------tggtggggcgccatgtccctctgct 46
>gb|BE362211.1|BE362211 DG1_85_C11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 471
Score = 547 bits (276), Expect = e-154
Identities = 420/468 (89%)
Strand = Plus / Minus
Query: 316 tagttgcaggaataatggatgctctcaatcgcatagtcgttcgcgcaggtcgcgtgtttg 375
||||||||||||||||| ||||| ||||| |||||||| || || ||||| || ||||||
Sbjct: 468 tagttgcaggaataatgaatgctttcaattgcatagtcatttgcacaggtggcatgtttg 409
Query: 376 ttcttgcaattttcccagtggacgatgtcgtcagaccatccatctgtaagattcatcttg 435
|| | ||||||||||||||| || || |||||||||||||||||||| ||||| |||
Sbjct: 408 ttatggcaattttcccagtgagtaatatcatcagaccatccatctgtaaggttcatattg 349
Query: 436 agagcctctaccatggtatccatgctcttgttgtagaagtccttgatcgccgtatcaata 495
|||| |||||||| ||||||||| |||| |||||||||| ||||| |||||||| |||
Sbjct: 348 agagtatctaccatagtatccatgatcttactgtagaagtcattgattgccgtatctata 289
Query: 496 atgctgacatcccacacgtgatggaggtttgctttcctccggtaccagtggacggtgatg 555
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 atgctgacatcccacatgtgatggaggtttgctttcctccggtaccagtggacggtgatc 229
Query: 556 gtgttaccgccctcgtcatcttcgaagcctacgtgcagcggctggtggacgtcgccgacg 615
||||| |||| ||||||||||| |||||||| ||||| |||||||||||||||||| |
Sbjct: 228 gtgttcccgctttcgtcatcttcaaagcctacatgcagtggctggtggacgtcgccgtca 169
Query: 616 aagtgtgccaggaacatcaggctctccgtcaggttatacgaagtcttctggccgtagctg 675
|| ||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||
Sbjct: 168 aaatgtgccaggaacatcaggctctccgtcaggttatacgtagtgttctggccatagctg 109
Query: 676 tagagctggtccgtgtagttgttgatagccccgacgacgcacatcccttgctggccacga 735
||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 108 tagagttggtcagtgtagttgttgatagcccctacgacgcacatcccttgctggccacga 49
Query: 736 gaattgtggcagtcccgagaatacttgaagttgcagacttggggggtg 783
||||||||||| |||||||| || ||||||||||||||||| ||||||
Sbjct: 48 gaattgtggcaatcccgagagtatttgaagttgcagacttgaggggtg 1
>gb|CD222621.1|CD222621 CCC1_23_G08.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_23_G08_A007 3', mRNA sequence
Length = 631
Score = 543 bits (274), Expect = e-152
Identities = 401/442 (90%), Gaps = 1/442 (0%)
Strand = Plus / Minus
Query: 101 aatggacaaatccttgtaatagctatgcttcctttt-attagagctgttactgtacttgt 159
||||||| ||||||||||||||||||||||| |||| |||| | ||||||||||||| ||
Sbjct: 442 aatggaccaatccttgtaatagctatgcttctttttcattacaactgttactgtactcgt 383
Query: 160 agtggtatatcatccgcttcacctccaccaaatatccgattaagtaccaacgccaatctg 219
|||||||||||||| |||| | | ||| |||| ||||||||||||| |||||||| ||||
Sbjct: 382 agtggtatatcatctgctttatccccatcaaagatccgattaagtatcaacgccagtctg 323
Query: 220 attccagcctgcgctaacctcttctccacaatcgggtacctactgaaaaaataatcatct 279
||||||||||| ||||| |||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 322 attccagcctgtgctaatctcttctccacaatcgggtatctagtgaaaaaataatcatct 263
Query: 280 cctagagtgatgtcttgctccacatctttgtaggcgtagttgcaggaataatggatgctc 339
|||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 262 cctagagtaatgccttgctccacatctttgtaggcatagttgcaggaataatgaatgctc 203
Query: 340 tcaatcgcatagtcgttcgcgcaggtcgcgtgtttgttcttgcaattttcccagtggacg 399
||||| |||||||| || || ||||| || |||||||||| |||||||||||||||
Sbjct: 202 tcaattgcatagtcatttgcacaggtggcatgtttgttctcgcaattttcccagtgagta 143
Query: 400 atgtcgtcagaccatccatctgtaagattcatcttgagagcctctaccatggtatccatg 459
|| || |||||||||||||||||||| ||||||||||||| ||||||||| |||||||||
Sbjct: 142 atatcatcagaccatccatctgtaaggttcatcttgagagtctctaccatagtatccatg 83
Query: 460 ctcttgttgtagaagtccttgatcgccgtatcaataatgctgacatcccacacgtgatgg 519
||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 82 ctcttattgtagaagtccttgattgccgtatctataatgctgacatcccacacgtgatgg 23
Query: 520 aggtttgctttcctccggtacc 541
||||||||||||||||||||||
Sbjct: 22 aggtttgctttcctccggtacc 1
Score = 40.1 bits (20), Expect = 0.41
Identities = 36/40 (90%), Gaps = 1/40 (2%)
Strand = Plus / Minus
Query: 22 ttacaaattcatgc-caatttattgatgtatagcaatgga 60
|||||||||||||| |||||||||| |||||| ||||||
Sbjct: 476 ttacaaattcatgctaaatttattgaagtataggaatgga 437
>gb|CD223647.1|CD223647 CCC1_29_D06.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_29_D06_A007 3', mRNA sequence
Length = 624
Score = 529 bits (267), Expect = e-148
Identities = 394/435 (90%), Gaps = 1/435 (0%)
Strand = Plus / Minus
Query: 101 aatggacaaatccttgtaatagctatgcttcctttt-attagagctgttactgtacttgt 159
||||||| ||||||||||||||||||||||| |||| |||| | ||||||||||||| ||
Sbjct: 435 aatggaccaatccttgtaatagctatgcttctttttcattacaactgttactgtactcgt 376
Query: 160 agtggtatatcatccgcttcacctccaccaaatatccgattaagtaccaacgccaatctg 219
|||||||||||||| |||| | | ||| |||| ||||||||||||| |||||||| ||||
Sbjct: 375 agtggtatatcatctgctttatccccatcaaagatccgattaagtatcaacgccagtctg 316
Query: 220 attccagcctgcgctaacctcttctccacaatcgggtacctactgaaaaaataatcatct 279
||||||||||| ||||| |||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 315 attccagcctgtgctaatctcttctccacaatcgggtatctagtgaaaaaataatcatct 256
Query: 280 cctagagtgatgtcttgctccacatctttgtaggcgtagttgcaggaataatggatgctc 339
|||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 255 cctagagtaatgccttgctccacatctttgtaggcatagttgcaggaataatgaatgctc 196
Query: 340 tcaatcgcatagtcgttcgcgcaggtcgcgtgtttgttcttgcaattttcccagtggacg 399
||||| |||||||| || || ||||| || |||||||||| |||||||||||||||
Sbjct: 195 tcaattgcatagtcatttgcacaggtggcatgtttgttctcgcaattttcccagtgagta 136
Query: 400 atgtcgtcagaccatccatctgtaagattcatcttgagagcctctaccatggtatccatg 459
|| || |||||||||||||||||||| ||||||||||||| ||||||||| |||||||||
Sbjct: 135 atatcatcagaccatccatctgtaaggttcatcttgagagtctctaccatagtatccatg 76
Query: 460 ctcttgttgtagaagtccttgatcgccgtatcaataatgctgacatcccacacgtgatgg 519
||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 75 ctcttattgtagaagtccttgattgccgtatctataatgctgacatcccacacgtgatgg 16
Query: 520 aggtttgctttcctc 534
|||||||||||||||
Sbjct: 15 aggtttgctttcctc 1
Score = 40.1 bits (20), Expect = 0.41
Identities = 36/40 (90%), Gaps = 1/40 (2%)
Strand = Plus / Minus
Query: 22 ttacaaattcatgc-caatttattgatgtatagcaatgga 60
|||||||||||||| |||||||||| |||||| ||||||
Sbjct: 469 ttacaaattcatgctaaatttattgaagtataggaatgga 430
>gb|BM326068.1|BM326068 PIC1_65_D07.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 470
Score = 527 bits (266), Expect = e-148
Identities = 366/400 (91%), Gaps = 12/400 (3%)
Strand = Plus / Minus
Query: 670 tagctgtagagctggtccgtgtagttgttgatagccccgacgacgcacatcccttgctgg 729
|||| |||||||||||| | |||||||||||||||| |||||||||||||||||||||
Sbjct: 470 tagccgtagagctggtcagcgtagttgttgatagccaagacgacgcacatcccttgctga 411
Query: 730 ccacgagaattgtggcagtcccgagaatacttgaagttgcagacttggggggtgttggcg 789
||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||| ||
Sbjct: 410 ccacgagaattgtggcaatcccgagagtacttgaagttgcagacttgaggggtgttgacg 351
Query: 790 tagtggagcgggctggcccagtggtagtgccagcgcacctggtccgcccacgggcacacc 849
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 350 tagtggagcgggctggcccagtggtagtgccagcgcaccgtgtccgcccacgggcacacc 291
Query: 850 gtcgacagctccccgcccgccgactccggcagcagcgcctgcaccgccgccgccgccttc 909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gtcgacagctccccgcccgccgactccggcagcagcgcctgcaccgccgccgccgccttc 231
Query: 910 tccgacaggtacttctcggcgatcttgcagaccatgatgtggccctcctttccccacgcg 969
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 230 tccgacaggtacttctcggcgatcttgcagaccatgatgtggccctccttgccccacgcg 171
Query: 970 ccggcgaggggcggggcaaggaggaggagg------aggaagacgagtgggaacaggagc 1023
||||| |||| ||| | | |||||||||| |||||||||||||||||| |||||
Sbjct: 170 tcggcgcggggtgggacgatgaggaggaggaggaggaggaagacgagtgggaacgggagc 111
Query: 1024 agcgcccgctgctggtggtggggcgccatgtctctctgct 1063
||| ||||| ||||||||||||||||| |||||||
Sbjct: 110 agcacccgc------tggtggggcgccatgtccctctgct 77
>gb|BG357617.1|BG357617 OV2_32_B07.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 573
Score = 486 bits (245), Expect = e-135
Identities = 372/413 (90%), Gaps = 1/413 (0%)
Strand = Plus / Minus
Query: 101 aatggacaaatccttgtaatagctatgcttcctttt-attagagctgttactgtacttgt 159
||||||| ||||||||||||||||||||||| |||| |||| | ||||||||||||| ||
Sbjct: 413 aatggaccaatccttgtaatagctatgcttctttttcattacaactgttactgtactcgt 354
Query: 160 agtggtatatcatccgcttcacctccaccaaatatccgattaagtaccaacgccaatctg 219
|||||||||||||| |||| | | ||| |||| ||||||||||||| |||||||| ||||
Sbjct: 353 agtggtatatcatctgctttatccccatcaaagatccgattaagtatcaacgccagtctg 294
Query: 220 attccagcctgcgctaacctcttctccacaatcgggtacctactgaaaaaataatcatct 279
||||||||||| ||||| |||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 293 attccagcctgtgctaatctcttctccacaatcgggtatctagtgaaaaaataatcatct 234
Query: 280 cctagagtgatgtcttgctccacatctttgtaggcgtagttgcaggaataatggatgctc 339
|||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 233 cctagagtaatgccttgctccacatctttgtaggcatagttgcaggaataatgaatgctc 174
Query: 340 tcaatcgcatagtcgttcgcgcaggtcgcgtgtttgttcttgcaattttcccagtggacg 399
||||| |||||||| || || ||||| || |||||||||| |||||||||||||||
Sbjct: 173 tcaattgcatagtcatttgcacaggtggcatgtttgttctcgcaattttcccagtgagta 114
Query: 400 atgtcgtcagaccatccatctgtaagattcatcttgagagcctctaccatggtatccatg 459
|| || |||||||||||||||||||| ||||||||||||| ||||||||| |||||||||
Sbjct: 113 atatcatcagaccatccatctgtaaggttcatcttgagagtctctaccatagtatccatg 54
Query: 460 ctcttgttgtagaagtccttgatcgccgtatcaataatgctgacatcccacac 512
||||| ||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 53 ctcttattgtagaagtccttgattgccgtatctataatgctgacatcccacac 1
Score = 40.1 bits (20), Expect = 0.41
Identities = 36/40 (90%), Gaps = 1/40 (2%)
Strand = Plus / Minus
Query: 22 ttacaaattcatgc-caatttattgatgtatagcaatgga 60
|||||||||||||| |||||||||| |||||| ||||||
Sbjct: 447 ttacaaattcatgctaaatttattgaagtataggaatgga 408
>gb|CF760183.1|CF760183 DSAF1_56_E07.b1_A011 Drought-stressed after flowering Sorghum bicolor
cDNA clone DSAF1_56_E07_A011 5', mRNA sequence
Length = 398
Score = 476 bits (240), Expect = e-132
Identities = 322/350 (92%), Gaps = 12/350 (3%)
Strand = Plus / Minus
Query: 720 cccttgctggccacgagaattgtggcagtcccgagaatacttgaagttgcagacttgggg 779
||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||
Sbjct: 398 cccttgctggccacgagaattgtggcaatcccgagagtacttgaagttgcagacttgagg 339
Query: 780 ggtgttggcgtagtggagcgggctggcccagtggtagtgccagcgcacctggtccgccca 839
||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 338 ggtgttgacgtagtggagcgggctggcccagtggtagtgccagcgcaccgtgtccgccca 279
Query: 840 cgggcacaccgtcgacagctccccgcccgccgactccggcagcagcgcctgcaccgccgc 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 cgggcacaccgtcgacagctccccgcccgccgactccggcagcagcgcctgcaccgccgc 219
Query: 900 cgccgccttctccgacaggtacttctcggcgatcttgcagaccatgatgtggccctcctt 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 cgccgccttctccgacaggtacttctcggcgatcttgcagaccatgatgtggccctcctt 159
Query: 960 tccccacgcgccggcgaggggcggggcaaggaggagga------ggaggaagacgagtgg 1013
||||||||| ||||| |||| ||| | | |||||||| ||||||||||||||||
Sbjct: 158 gccccacgcgtcggcgcggggtgggacgacgaggaggaggaggaggaggaagacgagtgg 99
Query: 1014 gaacaggagcagcgcccgctgctggtggtggggcgccatgtctctctgct 1063
|||| |||||||| ||||| ||||||||||||||||| |||||||
Sbjct: 98 gaacgggagcagcacccgc------tggtggggcgccatgtccctctgct 55
>gb|CF433936.1|CF433936 NIT1_31_B05.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_31_B05_A002 3', mRNA sequence
Length = 670
Score = 474 bits (239), Expect = e-132
Identities = 366/407 (89%), Gaps = 1/407 (0%)
Strand = Plus / Minus
Query: 101 aatggacaaatccttgtaatagctatgcttcctttt-attagagctgttactgtacttgt 159
||||||| ||||||||||||||||||||||| |||| |||| | ||||||||||||| ||
Sbjct: 407 aatggaccaatccttgtaatagctatgcttctttttcattacaactgttactgtactcgt 348
Query: 160 agtggtatatcatccgcttcacctccaccaaatatccgattaagtaccaacgccaatctg 219
|||||||||||||| |||| | | ||| |||| ||||||||||||| |||||||| ||||
Sbjct: 347 agtggtatatcatctgctttatccccatcaaagatccgattaagtatcaacgccagtctg 288
Query: 220 attccagcctgcgctaacctcttctccacaatcgggtacctactgaaaaaataatcatct 279
||||||||||| ||||| |||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 287 attccagcctgtgctaatctcttctccacaatcgggtatctagtgaaaaaataatcatct 228
Query: 280 cctagagtgatgtcttgctccacatctttgtaggcgtagttgcaggaataatggatgctc 339
|||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 227 cctagagtaatgccttgctccacatctttgtaggcatagttgcaggaataatgaatgctc 168
Query: 340 tcaatcgcatagtcgttcgcgcaggtcgcgtgtttgttcttgcaattttcccagtggacg 399
||||| |||||||| || || ||||| || |||||||||| |||||||||||||||
Sbjct: 167 tcaattgcatagtcatttgcacaggtggcatgtttgttctcgcaattttcccagtgagta 108
Query: 400 atgtcgtcagaccatccatctgtaagattcatcttgagagcctctaccatggtatccatg 459
|| || |||||||||||||||||||| ||||||||||||| ||||||||| |||||||||
Sbjct: 107 atatcatcagaccatccatctgtaaggttcatcttgagagtctctaccatagtatccatg 48
Query: 460 ctcttgttgtagaagtccttgatcgccgtatcaataatgctgacatc 506
||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 47 ctcttattgtagaagtccttgattgccgtatctataatgctgacatc 1
Score = 40.1 bits (20), Expect = 0.41
Identities = 36/40 (90%), Gaps = 1/40 (2%)
Strand = Plus / Minus
Query: 22 ttacaaattcatgc-caatttattgatgtatagcaatgga 60
|||||||||||||| |||||||||| |||||| ||||||
Sbjct: 441 ttacaaattcatgctaaatttattgaagtataggaatgga 402
>gb|BE125102.1|BE125102 DG1_16_C07.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 381
Score = 420 bits (212), Expect = e-115
Identities = 291/318 (91%), Gaps = 12/318 (3%)
Strand = Plus / Minus
Query: 752 gagaatacttgaagttgcagacttggggggtgttggcgtagtggagcgggctggcccagt 811
|||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 381 gagagtacttgaagttgcagacttgaggggtgttgacgtagtggagcgggctggcccagt 322
Query: 812 ggtagtgccagcgcacctggtccgcccacgggcacaccgtcgacagctccccgcccgccg 871
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtagtgccagcgcaccgtgtccgcccacgggcacaccgtcgacagctccccgcccgccg 262
Query: 872 actccggcagcagcgcctgcaccgccgccgccgccttctccgacaggtacttctcggcga 931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actccggcagcagcgcctgcaccgccgccgccgccttctccgacaggtacttctcggcga 202
Query: 932 tcttgcagaccatgatgtggccctcctttccccacgcgccggcgaggggcggggcaagga 991
|||||||||||||||||||||||||||| ||||||||| ||||| |||| ||| | | ||
Sbjct: 201 tcttgcagaccatgatgtggccctccttgccccacgcgtcggcgcggggtgggacgacga 142
Query: 992 ggagg------aggaggaagacgagtgggaacaggagcagcgcccgctgctggtggtggg 1045
||||| ||||||||||||||||||||| |||||||| ||||| |||||||
Sbjct: 141 ggaggaggaggaggaggaagacgagtgggaacgggagcagcacccgc------tggtggg 88
Query: 1046 gcgccatgtctctctgct 1063
|||||||||| |||||||
Sbjct: 87 gcgccatgtccctctgct 70
>gb|BM330914.1|BM330914 PIC1_67_B06.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 568
Score = 414 bits (209), Expect = e-114
Identities = 327/365 (89%), Gaps = 1/365 (0%)
Strand = Plus / Minus
Query: 101 aatggacaaatccttgtaatagctatgcttcctttt-attagagctgttactgtacttgt 159
||||||| ||||||||||||||||||||||| |||| |||| | ||||||||||||| ||
Sbjct: 367 aatggaccaatccttgtaatagctatgcttctttttcattacaactgttactgtactcgt 308
Query: 160 agtggtatatcatccgcttcacctccaccaaatatccgattaagtaccaacgccaatctg 219
|||||||||||||| |||| | | ||| |||| ||||||||||||| |||||||| ||||
Sbjct: 307 agtggtatatcatctgctttatccccatcaaagatccgattaagtatcaacgccagtctg 248
Query: 220 attccagcctgcgctaacctcttctccacaatcgggtacctactgaaaaaataatcatct 279
||||||||||| ||||| |||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 247 attccagcctgtgctaatctcttctccacaatcgggtatctagtgaaaaaataatcatct 188
Query: 280 cctagagtgatgtcttgctccacatctttgtaggcgtagttgcaggaataatggatgctc 339
|||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 187 cctagagtaatgccttgctccacatctttgtaggcatagttgcaggaataatgaatgctc 128
Query: 340 tcaatcgcatagtcgttcgcgcaggtcgcgtgtttgttcttgcaattttcccagtggacg 399
||||| |||||||| || || ||||| || |||||||||| |||||||||||||||
Sbjct: 127 tcaattgcatagtcatttgcacaggtggcatgtttgttctcgcaattttcccagtgagta 68
Query: 400 atgtcgtcagaccatccatctgtaagattcatcttgagagcctctaccatggtatccatg 459
|| || |||||||||||||||||||| ||||||||||||| ||||||||| |||||||||
Sbjct: 67 atatcatcagaccatccatctgtaaggttcatcttgagagtctctaccatagtatccatg 8
Query: 460 ctctt 464
|||||
Sbjct: 7 ctctt 3
Score = 40.1 bits (20), Expect = 0.41
Identities = 36/40 (90%), Gaps = 1/40 (2%)
Strand = Plus / Minus
Query: 22 ttacaaattcatgc-caatttattgatgtatagcaatgga 60
|||||||||||||| |||||||||| |||||| ||||||
Sbjct: 401 ttacaaattcatgctaaatttattgaagtataggaatgga 362
>gb|CF760685.1|CF760685 DSAF1_64_F03.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_64_F03_A011 5', mRNA sequence
Length = 522
Score = 341 bits (172), Expect = 8e-092
Identities = 284/320 (88%), Gaps = 1/320 (0%)
Strand = Plus / Minus
Query: 101 aatggacaaatccttgtaatagctatgcttcctttt-attagagctgttactgtacttgt 159
||||||| ||||||||||||||||||||||| |||| |||| | ||||||||||||| ||
Sbjct: 320 aatggaccaatccttgtaatagctatgcttctttttcattacaactgttactgtactcgt 261
Query: 160 agtggtatatcatccgcttcacctccaccaaatatccgattaagtaccaacgccaatctg 219
|||||||||||||| |||| | | ||| |||| |||||||| |||| |||||||| ||||
Sbjct: 260 agtggtatatcatctgctttatccccatcaaagatccgattgagtatcaacgccagtctg 201
Query: 220 attccagcctgcgctaacctcttctccacaatcgggtacctactgaaaaaataatcatct 279
||||||||||| ||||| |||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 200 attccagcctgtgctaatctcttctccacaatcgggtatctagtgaaaaaataatcatct 141
Query: 280 cctagagtgatgtcttgctccacatctttgtaggcgtagttgcaggaataatggatgctc 339
|||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 140 cctagagtaatgccttgctccacatctttgtaggcatagttgcaggaataatgaatgctc 81
Query: 340 tcaatcgcatagtcgttcgcgcaggtcgcgtgtttgttcttgcaattttcccagtggacg 399
||||| |||||||| || || ||||| || |||||||||| |||||||||||||||
Sbjct: 80 tcaattgcatagtcatttgcacaggtggcatgtttgttctcgcaattttcccagtgagta 21
Query: 400 atgtcgtcagaccatccatc 419
|| || ||||||||||||||
Sbjct: 20 atatcatcagaccatccatc 1
Score = 40.1 bits (20), Expect = 0.41
Identities = 36/40 (90%), Gaps = 1/40 (2%)
Strand = Plus / Minus
Query: 22 ttacaaattcatgc-caatttattgatgtatagcaatgga 60
|||||||||||||| |||||||||| |||||| ||||||
Sbjct: 354 ttacaaattcatgctaaatttattgaagtataggaatgga 315
>gb|CF760686.1|CF760686 DSAF1_64_F04.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_64_F04_A011 5', mRNA sequence
Length = 523
Score = 341 bits (172), Expect = 8e-092
Identities = 284/320 (88%), Gaps = 1/320 (0%)
Strand = Plus / Minus
Query: 101 aatggacaaatccttgtaatagctatgcttcctttt-attagagctgttactgtacttgt 159
||||||| ||||||||||||||||||||||| |||| |||| | ||||||||||||| ||
Sbjct: 320 aatggaccaatccttgtaatagctatgcttctttttcattacaactgttactgtactcgt 261
Query: 160 agtggtatatcatccgcttcacctccaccaaatatccgattaagtaccaacgccaatctg 219
|||||||||||||| |||| | | ||| |||| |||||||| |||| |||||||| ||||
Sbjct: 260 agtggtatatcatctgctttatccccatcaaagatccgattgagtatcaacgccagtctg 201
Query: 220 attccagcctgcgctaacctcttctccacaatcgggtacctactgaaaaaataatcatct 279
||||||||||| ||||| |||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 200 attccagcctgtgctaatctcttctccacaatcgggtatctagtgaaaaaataatcatct 141
Query: 280 cctagagtgatgtcttgctccacatctttgtaggcgtagttgcaggaataatggatgctc 339
|||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 140 cctagagtaatgccttgctccacatctttgtaggcatagttgcaggaataatgaatgctc 81
Query: 340 tcaatcgcatagtcgttcgcgcaggtcgcgtgtttgttcttgcaattttcccagtggacg 399
||||| |||||||| || || ||||| || |||||||||| |||||||||||||||
Sbjct: 80 tcaattgcatagtcatttgcacaggtggcatgtttgttctcgcaattttcccagtgagta 21
Query: 400 atgtcgtcagaccatccatc 419
|| || ||||||||||||||
Sbjct: 20 atatcatcagaccatccatc 1
Score = 40.1 bits (20), Expect = 0.41
Identities = 36/40 (90%), Gaps = 1/40 (2%)
Strand = Plus / Minus
Query: 22 ttacaaattcatgc-caatttattgatgtatagcaatgga 60
|||||||||||||| |||||||||| |||||| ||||||
Sbjct: 354 ttacaaattcatgctaaatttattgaagtataggaatgga 315
>gb|BM331378.1|BM331378 PIC1_65_D07.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 501
Score = 333 bits (168), Expect = 2e-089
Identities = 265/296 (89%), Gaps = 1/296 (0%)
Strand = Plus / Minus
Query: 101 aatggacaaatccttgtaatagctatgcttcctttt-attagagctgttactgtacttgt 159
||||||| ||||||||||||||||||||||| |||| |||| | ||||||||||||| |
Sbjct: 300 aatggaccaatccttgtaatagctatgcttctttttcattacaactgttactgtactcga 241
Query: 160 agtggtatatcatccgcttcacctccaccaaatatccgattaagtaccaacgccaatctg 219
|||||||||||||| |||| | | ||| |||| ||||||||||||| |||||||| ||||
Sbjct: 240 agtggtatatcatctgctttatccccatcaaagatccgattaagtatcaacgccagtctg 181
Query: 220 attccagcctgcgctaacctcttctccacaatcgggtacctactgaaaaaataatcatct 279
||||||||||| ||||| |||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 180 attccagcctgtgctaatctcttctccacaatcgggtatctagtgaaaaaataatcatct 121
Query: 280 cctagagtgatgtcttgctccacatctttgtaggcgtagttgcaggaataatggatgctc 339
|||||||| ||| |||||||||||||||||||||| || |||||||||||||| ||||||
Sbjct: 120 cctagagtaatgccttgctccacatctttgtaggcataattgcaggaataatgaatgctc 61
Query: 340 tcaatcgcatagtcgttcgcgcaggtcgcgtgtttgttcttgcaattttcccagtg 395
||||| |||||||| || || ||||| || |||||||||| |||||||||||||||
Sbjct: 60 tcaattgcatagtcatttgcacaggtggcatgtttgttctcgcaattttcccagtg 5
Score = 40.1 bits (20), Expect = 0.41
Identities = 36/40 (90%), Gaps = 1/40 (2%)
Strand = Plus / Minus
Query: 22 ttacaaattcatgc-caatttattgatgtatagcaatgga 60
|||||||||||||| |||||||||| |||||| ||||||
Sbjct: 334 ttacaaattcatgctaaatttattgaagtataggaatgga 295
>gb|BM330928.1|BM330928 PIC1_67_C10.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 504
Score = 313 bits (158), Expect = 2e-083
Identities = 231/254 (90%), Gaps = 1/254 (0%)
Strand = Plus / Minus
Query: 101 aatggacaaatccttgtaatagctatgcttcctttt-attagagctgttactgtacttgt 159
||||||| ||||||||||||||||||||||| |||| |||| | ||||||||||||| ||
Sbjct: 270 aatggaccaatccttgtaatagctatgcttctttttcattacaactgttactgtactcgt 211
Query: 160 agtggtatatcatccgcttcacctccaccaaatatccgattaagtaccaacgccaatctg 219
|||||||||||||| |||| | | ||| |||| ||||||||||||| |||||||| ||||
Sbjct: 210 agtggtatatcatctgctttatccccatcaaagatccgattaagtatcaacgccagtctg 151
Query: 220 attccagcctgcgctaacctcttctccacaatcgggtacctactgaaaaaataatcatct 279
||||||||||| ||||| |||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 150 attccagcctgtgctaatctcttctccacaatcgggtatctagtgaaaaaataatcatct 91
Query: 280 cctagagtgatgtcttgctccacatctttgtaggcgtagttgcaggaataatggatgctc 339
|||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 90 cctagagtaatgccttgctccacatctttgtaggcatagttgcaggaataatgaatgctc 31
Query: 340 tcaatcgcatagtc 353
||||| ||||||||
Sbjct: 30 tcaattgcatagtc 17
Score = 40.1 bits (20), Expect = 0.41
Identities = 36/40 (90%), Gaps = 1/40 (2%)
Strand = Plus / Minus
Query: 22 ttacaaattcatgc-caatttattgatgtatagcaatgga 60
|||||||||||||| |||||||||| |||||| ||||||
Sbjct: 304 ttacaaattcatgctaaatttattgaagtataggaatgga 265
>gb|CW097693.1|CW097693 104_463_11002604_116_34347_066 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11002604, DNA
sequence
Length = 606
Score = 307 bits (155), Expect = 1e-081
Identities = 170/175 (97%)
Strand = Plus / Minus
Query: 751 cgagaatacttgaagttgcagacttggggggtgttggcgtagtggagcgggctggcccag 810
||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 582 cgagagtacttgaagttgcagacttgaggggtgttgacgtagtggagcgggctggcccag 523
Query: 811 tggtagtgccagcgcacctggtccgcccacgggcacaccgtcgacagctccccgcccgcc 870
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 tggtagtgccagcgcaccgtgtccgcccacgggcacaccgtcgacagctccccgcccgcc 463
Query: 871 gactccggcagcagcgcctgcaccgccgccgccgccttctccgacaggtacttct 925
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 gactccggcagcagcgcctgcaccgccgccgccgccttctccgacaggtacttct 408
Score = 119 bits (60), Expect = 6e-025
Identities = 124/146 (84%), Gaps = 12/146 (8%)
Strand = Plus / Minus
Query: 924 ctcggcgatcttgcagaccatgatgtggccctcctttccccacgcgccggcgaggggcgg 983
|||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||| ||
Sbjct: 302 ctcggcgatcttgcagaccatgatgtggccctccttgccccacgcgtcggcgcggggtgg 243
Query: 984 ggcaaggaggagga------ggaggaagacgagtgggaacaggagcagcgcccgctgctg 1037
| | | |||||||| |||||||||||||||||||| |||||||| |||||
Sbjct: 242 gacgacgaggaggaggaggaggaggaagacgagtgggaacgggagcagcacccgc----- 188
Query: 1038 gtggtggggcgccatgtctctctgct 1063
||||||||||||||||| |||||||
Sbjct: 187 -tggtggggcgccatgtccctctgct 163
>gb|CB927797.1|CB927797 ABA1_34_F12.b1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_34_F12_A012 3', mRNA sequence
Length = 662
Score = 301 bits (152), Expect = 7e-080
Identities = 228/252 (90%), Gaps = 1/252 (0%)
Strand = Plus / Minus
Query: 101 aatggacaaatccttgtaatagctatgcttcctttt-attagagctgttactgtacttgt 159
||||||| ||||||||||||||||||||||| |||| |||| | ||||||||||||| ||
Sbjct: 481 aatggaccaatccttgtaatagctatgcttctttttcattacaactgttactgtactcgt 422
Query: 160 agtggtatatcatccgcttcacctccaccaaatatccgattaagtaccaacgccaatctg 219
|||||||||||||| |||| | | ||| |||| |||||||| |||| |||||||| ||||
Sbjct: 421 agtggtatatcatctgctttatccccatcaaagatccgattgagtatcaacgccagtctg 362
Query: 220 attccagcctgcgctaacctcttctccacaatcgggtacctactgaaaaaataatcatct 279
||||||||||| ||||| |||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 361 attccagcctgtgctaatctcttctccacaatcgggtatctagtgaaaaaataatcatct 302
Query: 280 cctagagtgatgtcttgctccacatctttgtaggcgtagttgcaggaataatggatgctc 339
|||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 301 cctagagtaatgccttgctccacatctttgtaggcatagttgcaggaataatgaatgctc 242
Query: 340 tcaatcgcatag 351
||||| ||||||
Sbjct: 241 tcaattgcatag 230
Score = 131 bits (66), Expect = 1e-028
Identities = 108/122 (88%)
Strand = Plus / Minus
Query: 361 caggtcgcgtgtttgttcttgcaattttcccagtggacgatgtcgtcagaccatccatct 420
||||| || |||||||||| ||||||||||||||| || || |||||||||||||||
Sbjct: 125 caggtggcatgtttgttctcgcaattttcccagtgagtaatatcatcagaccatccatct 66
Query: 421 gtaagattcatcttgagagcctctaccatggtatccatgctcttgttgtagaagtccttg 480
||||| ||||||||||||| ||||||||| ||| |||||||||| |||||||||||||||
Sbjct: 65 gtaaggttcatcttgagagtctctaccatagtacccatgctcttattgtagaagtccttg 6
Query: 481 at 482
||
Sbjct: 5 at 4
Score = 40.1 bits (20), Expect = 0.41
Identities = 36/40 (90%), Gaps = 1/40 (2%)
Strand = Plus / Minus
Query: 22 ttacaaattcatgc-caatttattgatgtatagcaatgga 60
|||||||||||||| |||||||||| |||||| ||||||
Sbjct: 515 ttacaaattcatgctaaatttattgaagtataggaatgga 476
>gb|CF758161.1|CF758161 DSAF1_28_C04.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_28_C04_A011 3', mRNA sequence
Length = 543
Score = 301 bits (152), Expect = 7e-080
Identities = 228/252 (90%), Gaps = 1/252 (0%)
Strand = Plus / Minus
Query: 101 aatggacaaatccttgtaatagctatgcttcctttt-attagagctgttactgtacttgt 159
||||||| ||||||||||||||||||||||| |||| |||| | ||||||||||||| ||
Sbjct: 312 aatggaccaatccttgtaatagctatgcttctttttcattacaactgttactgtactcgt 253
Query: 160 agtggtatatcatccgcttcacctccaccaaatatccgattaagtaccaacgccaatctg 219
|||||||||||||| |||| | | ||| |||| |||||||| |||| |||||||| ||||
Sbjct: 252 agtggtatatcatctgctttatccccatcaaagatccgattgagtatcaacgccagtctg 193
Query: 220 attccagcctgcgctaacctcttctccacaatcgggtacctactgaaaaaataatcatct 279
||||||||||| ||||| |||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 192 attccagcctgtgctaatctcttctccacaatcgggtatctagtgaaaaaataatcatct 133
Query: 280 cctagagtgatgtcttgctccacatctttgtaggcgtagttgcaggaataatggatgctc 339
|||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 132 cctagagtaatgccttgctccacatctttgtaggcatagttgcaggaataatgaatgctc 73
Query: 340 tcaatcgcatag 351
||||| ||||||
Sbjct: 72 tcaattgcatag 61
Score = 40.1 bits (20), Expect = 0.41
Identities = 36/40 (90%), Gaps = 1/40 (2%)
Strand = Plus / Minus
Query: 22 ttacaaattcatgc-caatttattgatgtatagcaatgga 60
|||||||||||||| |||||||||| |||||| ||||||
Sbjct: 346 ttacaaattcatgctaaatttattgaagtataggaatgga 307
>gb|CB929192.1|CB929192 ABA1_40_E05.b1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_40_E05_A012 3', mRNA sequence
Length = 560
Score = 293 bits (148), Expect = 2e-077
Identities = 227/252 (90%), Gaps = 1/252 (0%)
Strand = Plus / Minus
Query: 101 aatggacaaatccttgtaatagctatgcttcctttt-attagagctgttactgtacttgt 159
||||||| ||||||||||||||||||||||| |||| |||| | ||||||||||||| ||
Sbjct: 266 aatggaccaatccttgtaatagctatgcttctttttcattacaactgttactgtactcgt 207
Query: 160 agtggtatatcatccgcttcacctccaccaaatatccgattaagtaccaacgccaatctg 219
|||||||||||||| |||| | | ||| |||| |||||||| |||| |||||||| ||||
Sbjct: 206 agtggtatatcatctgctttatccccatcaaagatccgattgagtatcaacgccagtctg 147
Query: 220 attccagcctgcgctaacctcttctccacaatcgggtacctactgaaaaaataatcatct 279
||||||||||| ||||| |||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 146 attccagcctgtgctaatctcttctccacaatcgggtatctagtgaaaaaataatcatct 87
Query: 280 cctagagtgatgtcttgctccacatctttgtaggcgtagttgcaggaataatggatgctc 339
|||||||| ||| | |||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 86 cctagagtaatgccctgctccacatctttgtaggcatagttgcaggaataatgaatgctc 27
Query: 340 tcaatcgcatag 351
||||| ||||||
Sbjct: 26 tcaattgcatag 15
Score = 40.1 bits (20), Expect = 0.41
Identities = 36/40 (90%), Gaps = 1/40 (2%)
Strand = Plus / Minus
Query: 22 ttacaaattcatgc-caatttattgatgtatagcaatgga 60
|||||||||||||| |||||||||| |||||| ||||||
Sbjct: 300 ttacaaattcatgctaaatttattgaagtataggaatgga 261
>gb|CW097694.1|CW097694 104_463_11002604_148_34359_066 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11002604, DNA
sequence
Length = 493
Score = 283 bits (143), Expect = 2e-074
Identities = 167/175 (95%)
Strand = Plus / Plus
Query: 751 cgagaatacttgaagttgcagacttggggggtgttggcgtagtggagcgggctggcccag 810
||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 312 cgagagtacttgaagttgcagacttgaggggtgttgacgtagtggagcgggctggcccag 371
Query: 811 tggtagtgccagcgcacctggtccgcccacgggcacaccgtcgacagctccccgcccgcc 870
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tggtagtgccagcgcaccgtgtccgcccacgggcacaccgtcgacagctccccgcccgcc 431
Query: 871 gactccggcagcagcgcctgcaccgccgccgccgccttctccgacaggtacttct 925
|||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 432 gactccggcagcagcgcctgcaccgccgccgccgcctttctcgacaggtacttct 486
>gb|CW101845.1|CW101845 104_469_11004877_116_34404_049 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11004877, DNA
sequence
Length = 590
Score = 254 bits (128), Expect = 1e-065
Identities = 143/148 (96%)
Strand = Plus / Plus
Query: 751 cgagaatacttgaagttgcagacttggggggtgttggcgtagtggagcgggctggcccag 810
||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 443 cgagagtacttgaagttgcagacttgaggggtgttgacgtagtggagcgggctggcccag 502
Query: 811 tggtagtgccagcgcacctggtccgcccacgggcacaccgtcgacagctccccgcccgcc 870
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tggtagtgccagcgcaccgtgtccgcccacgggcacaccgtcgacagctccccgcccgcc 562
Query: 871 gactccggcagcagcgcctgcaccgccg 898
||||||||||||||||||||||||||||
Sbjct: 563 gactccggcagcagcgcctgcaccgccg 590
>gb|CF756773.1|CF756773 DSAF1_9_A07.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_9_A07_A011 3', mRNA sequence
Length = 381
Score = 222 bits (112), Expect = 5e-056
Identities = 179/200 (89%), Gaps = 1/200 (0%)
Strand = Plus / Minus
Query: 101 aatggacaaatccttgtaatagctatgcttcctttt-attagagctgttactgtacttgt 159
||||||| ||||||||||||||||||||||| |||| |||| | ||||||||||||| ||
Sbjct: 200 aatggaccaatccttgtaatagctatgcttctttttcattacaactgttactgtactcgt 141
Query: 160 agtggtatatcatccgcttcacctccaccaaatatccgattaagtaccaacgccaatctg 219
|||||||||||||| |||| | | ||| |||| |||||||| |||| |||||||| ||||
Sbjct: 140 agtggtatatcatctgctttatccccatcaaagatccgattgagtatcaacgccagtctg 81
Query: 220 attccagcctgcgctaacctcttctccacaatcgggtacctactgaaaaaataatcatct 279
||||||||||| ||||| |||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 80 attccagcctgtgctaatctcttctccacaatcgggtatctagtgaaaaaataatcatct 21
Query: 280 cctagagtgatgtcttgctc 299
|||||||| ||| |||||||
Sbjct: 20 cctagagtaatgccttgctc 1
Score = 40.1 bits (20), Expect = 0.41
Identities = 36/40 (90%), Gaps = 1/40 (2%)
Strand = Plus / Minus
Query: 22 ttacaaattcatgc-caatttattgatgtatagcaatgga 60
|||||||||||||| |||||||||| |||||| ||||||
Sbjct: 234 ttacaaattcatgctaaatttattgaagtataggaatgga 195
>gb|CW027240.1|CW027240 104_253_10498400_114_30531 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10498400, DNA
sequence
Length = 638
Score = 218 bits (110), Expect = 8e-055
Identities = 134/142 (94%)
Strand = Plus / Minus
Query: 511 acgtgatggaggtttgctttcctccggtaccagtggacggtgatggtgttaccgccctcg 570
|||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 461 acgtgatggaggtttgctttcctccggtaccagtggacggtgatcgtgttcccgccttcg 402
Query: 571 tcatcttcgaagcctacgtgcagcggctggtggacgtcgccgacgaagtgtgccaggaac 630
|||||||| |||||||| ||||| |||||||||||||||||||| || ||||||||||||
Sbjct: 401 tcatcttcaaagcctacatgcagtggctggtggacgtcgccgacaaaatgtgccaggaac 342
Query: 631 atcaggctctccgtcaggttat 652
||||||||||||||||||||||
Sbjct: 341 atcaggctctccgtcaggttat 320
Score = 172 bits (87), Expect = 4e-041
Identities = 96/99 (96%)
Strand = Plus / Minus
Query: 653 acgaagtcttctggccgtagctgtagagctggtccgtgtagttgttgatagccccgacga 712
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 221 acgaagtcttctggccatagctgtagagctggtcagtgtagttgttgatagccccgacga 162
Query: 713 cgcacatcccttgctggccacgagaattgtggcagtccc 751
|||||||||||||||||||||||||||||||||| ||||
Sbjct: 161 cgcacatcccttgctggccacgagaattgtggcaatccc 123
Score = 111 bits (56), Expect = 1e-022
Identities = 68/72 (94%)
Strand = Plus / Minus
Query: 441 ctctaccatggtatccatgctcttgttgtagaagtccttgatcgccgtatcaataatgct 500
||||||||| |||||||||||||| ||||||||||||||||| |||||||| ||||||||
Sbjct: 635 ctctaccatagtatccatgctcttattgtagaagtccttgattgccgtatctataatgct 576
Query: 501 gacatcccacac 512
||||||||||||
Sbjct: 575 gacatcccacac 564
>gb|CW059586.1|CW059586 104_302_10519408_114_30165 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10519408, DNA
sequence
Length = 636
Score = 218 bits (110), Expect = 8e-055
Identities = 134/142 (94%)
Strand = Plus / Plus
Query: 511 acgtgatggaggtttgctttcctccggtaccagtggacggtgatggtgttaccgccctcg 570
|||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 166 acgtgatggaggtttgctttcctccggtaccagtggacggtgatcgtgttcccgccttcg 225
Query: 571 tcatcttcgaagcctacgtgcagcggctggtggacgtcgccgacgaagtgtgccaggaac 630
|||||||| |||||||| ||||| |||||||||||||||||||| || ||||||||||||
Sbjct: 226 tcatcttcaaagcctacatgcagtggctggtggacgtcgccgacaaaatgtgccaggaac 285
Query: 631 atcaggctctccgtcaggttat 652
||||||||||||||||||||||
Sbjct: 286 atcaggctctccgtcaggttat 307
Score = 172 bits (87), Expect = 4e-041
Identities = 96/99 (96%)
Strand = Plus / Plus
Query: 653 acgaagtcttctggccgtagctgtagagctggtccgtgtagttgttgatagccccgacga 712
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 406 acgaagtcttctggccatagctgtagagctggtcagtgtagttgttgatagccccgacga 465
Query: 713 cgcacatcccttgctggccacgagaattgtggcagtccc 751
|||||||||||||||||||||||||||||||||| ||||
Sbjct: 466 cgcacatcccttgctggccacgagaattgtggcaatccc 504
Score = 99.6 bits (50), Expect = 5e-019
Identities = 59/62 (95%)
Strand = Plus / Plus
Query: 451 gtatccatgctcttgttgtagaagtccttgatcgccgtatcaataatgctgacatcccac 510
|||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 2 gtatccatgctcttattgtagaagtccttgattgccgtatctataatgctgacatcccac 61
Query: 511 ac 512
||
Sbjct: 62 ac 63
>gb|CW463841.1|CW463841 fsbb001f212l21f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f212l21, DNA
sequence
Length = 797
Score = 218 bits (110), Expect = 8e-055
Identities = 134/142 (94%)
Strand = Plus / Minus
Query: 511 acgtgatggaggtttgctttcctccggtaccagtggacggtgatggtgttaccgccctcg 570
|||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 653 acgtgatggaggtttgctttcctccggtaccagtggacggtgatcgtgttcccgccttcg 594
Query: 571 tcatcttcgaagcctacgtgcagcggctggtggacgtcgccgacgaagtgtgccaggaac 630
|||||||| |||||||| ||||| |||||||||||||||||||| || ||||||||||||
Sbjct: 593 tcatcttcaaagcctacatgcagtggctggtggacgtcgccgacaaaatgtgccaggaac 534
Query: 631 atcaggctctccgtcaggttat 652
||||||||||||||||||||||
Sbjct: 533 atcaggctctccgtcaggttat 512
Score = 172 bits (87), Expect = 4e-041
Identities = 96/99 (96%)
Strand = Plus / Minus
Query: 653 acgaagtcttctggccgtagctgtagagctggtccgtgtagttgttgatagccccgacga 712
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 413 acgaagtcttctggccatagctgtagagctggtcagtgtagttgttgatagccccgacga 354
Query: 713 cgcacatcccttgctggccacgagaattgtggcagtccc 751
|||||||||||||||||||||||||||||||||| ||||
Sbjct: 353 cgcacatcccttgctggccacgagaattgtggcaatccc 315
Score = 60.0 bits (30), Expect = 4e-007
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 471 gaagtccttgatcgccgtatcaataatgctgacatcccacac 512
|||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 797 gaagtccttgatgcccgtatctataatgctgacatcccacac 756
>gb|CW463842.1|CW463842 fsbb001f212l21k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f212l21, DNA
sequence
Length = 774
Score = 218 bits (110), Expect = 8e-055
Identities = 134/142 (94%)
Strand = Plus / Plus
Query: 511 acgtgatggaggtttgctttcctccggtaccagtggacggtgatggtgttaccgccctcg 570
|||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 311 acgtgatggaggtttgctttcctccggtaccagtggacggtgatcgtgttcccgccttcg 370
Query: 571 tcatcttcgaagcctacgtgcagcggctggtggacgtcgccgacgaagtgtgccaggaac 630
|||||||| |||||||| ||||| |||||||||||||||||||| || ||||||||||||
Sbjct: 371 tcatcttcaaagcctacatgcagtggctggtggacgtcgccgacaaaatgtgccaggaac 430
Query: 631 atcaggctctccgtcaggttat 652
||||||||||||||||||||||
Sbjct: 431 atcaggctctccgtcaggttat 452
Score = 172 bits (87), Expect = 4e-041
Identities = 96/99 (96%)
Strand = Plus / Plus
Query: 653 acgaagtcttctggccgtagctgtagagctggtccgtgtagttgttgatagccccgacga 712
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 551 acgaagtcttctggccatagctgtagagctggtcagtgtagttgttgatagccccgacga 610
Query: 713 cgcacatcccttgctggccacgagaattgtggcagtccc 751
|||||||||||||||||||||||||||||||||| ||||
Sbjct: 611 cgcacatcccttgctggccacgagaattgtggcaatccc 649
Score = 139 bits (70), Expect = 6e-031
Identities = 88/94 (93%)
Strand = Plus / Plus
Query: 419 ctgtaagattcatcttgagagcctctaccatggtatccatgctcttgttgtagaagtcct 478
||||||| ||||||||||||| ||||||||| |||||||||||||| |||||||||||||
Sbjct: 115 ctgtaaggttcatcttgagagtctctaccatagtatccatgctcttattgtagaagtcct 174
Query: 479 tgatcgccgtatcaataatgctgacatcccacac 512
|||| |||||||| ||||||||||||||||||||
Sbjct: 175 tgattgccgtatctataatgctgacatcccacac 208
>gb|CW027241.1|CW027241 104_253_10498400_116_30528 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10498400, DNA
sequence
Length = 691
Score = 206 bits (104), Expect = 3e-051
Identities = 162/180 (90%), Gaps = 1/180 (0%)
Strand = Plus / Plus
Query: 101 aatggacaaatccttgtaatagctatgcttcctttt-attagagctgttactgtacttgt 159
||||||| ||||||||||||||||||||||| |||| |||| | ||||||||||||| ||
Sbjct: 169 aatggaccaatccttgtaatagctatgcttctttttcattacaactgttactgtactcgt 228
Query: 160 agtggtatatcatccgcttcacctccaccaaatatccgattaagtaccaacgccaatctg 219
|||||||||||||| |||| | | ||| |||| ||||||||||||| |||||||| ||||
Sbjct: 229 agtggtatatcatctgctttatccccatcaaagatccgattaagtatcaacgccagtctg 288
Query: 220 attccagcctgcgctaacctcttctccacaatcgggtacctactgaaaaaataatcatct 279
||||||||||| ||||| |||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 289 attccagcctgtgctaatctcttctccacaatcgggtatctagtgaaaaaataatcatct 348
Score = 107 bits (54), Expect = 2e-021
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 278 ctcctagagtgatgtcttgctccacatctttgtaggcgtagttgcaggaataatggatgc 337
|||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 431 ctcctagagtaatgccttgctccacatctttgtaggcatagttgcaggaataatgaatgc 490
Query: 338 tctcaatcgcatag 351
||||||| ||||||
Sbjct: 491 tctcaattgcatag 504
Score = 46.1 bits (23), Expect = 0.007
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 361 caggtcgcgtgtttgttcttgcaattttcccagtggacgatgtcgtcagaccatccatc 419
||||| || |||||||||| ||||||||||||||| || || ||||||||||||||
Sbjct: 609 caggtggcatgtttgttctcgcaattttcccagtgagtaatatcatcagaccatccatc 667
Score = 40.1 bits (20), Expect = 0.41
Identities = 36/40 (90%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 22 ttacaaattcatgc-caatttattgatgtatagcaatgga 60
|||||||||||||| |||||||||| |||||| ||||||
Sbjct: 135 ttacaaattcatgctaaatttattgaagtataggaatgga 174
>gb|CW122837.1|CW122837 104_501_11110890_116_34680_065 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11110890, DNA
sequence
Length = 585
Score = 206 bits (104), Expect = 3e-051
Identities = 162/180 (90%), Gaps = 1/180 (0%)
Strand = Plus / Plus
Query: 101 aatggacaaatccttgtaatagctatgcttcctttt-attagagctgttactgtacttgt 159
||||||| ||||||||||||||||||||||| |||| |||| | ||||||||||||| ||
Sbjct: 127 aatggaccaatccttgtaatagctatgcttctttttcattacaactgttactgtactcgt 186
Query: 160 agtggtatatcatccgcttcacctccaccaaatatccgattaagtaccaacgccaatctg 219
|||||||||||||| |||| | | ||| |||| ||||||||||||| |||||||| ||||
Sbjct: 187 agtggtatatcatctgctttatccccatcaaagatccgattaagtatcaacgccagtctg 246
Query: 220 attccagcctgcgctaacctcttctccacaatcgggtacctactgaaaaaataatcatct 279
||||||||||| ||||| |||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 247 attccagcctgtgctaatctcttctccacaatcgggtatctagtgaaaaaataatcatct 306
Score = 107 bits (54), Expect = 2e-021
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 278 ctcctagagtgatgtcttgctccacatctttgtaggcgtagttgcaggaataatggatgc 337
|||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 389 ctcctagagtaatgccttgctccacatctttgtaggcatagttgcaggaataatgaatgc 448
Query: 338 tctcaatcgcatag 351
||||||| ||||||
Sbjct: 449 tctcaattgcatag 462
Score = 40.1 bits (20), Expect = 0.41
Identities = 36/40 (90%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 22 ttacaaattcatgc-caatttattgatgtatagcaatgga 60
|||||||||||||| |||||||||| |||||| ||||||
Sbjct: 93 ttacaaattcatgctaaatttattgaagtataggaatgga 132
>gb|CW286430.1|CW286430 104_764_11410873_116_35515_013 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11410873, DNA
sequence
Length = 699
Score = 206 bits (104), Expect = 3e-051
Identities = 162/180 (90%), Gaps = 1/180 (0%)
Strand = Plus / Plus
Query: 101 aatggacaaatccttgtaatagctatgcttcctttt-attagagctgttactgtacttgt 159
||||||| ||||||||||||||||||||||| |||| |||| | ||||||||||||| ||
Sbjct: 262 aatggaccaatccttgtaatagctatgcttctttttcattacaactgttactgtactcgt 321
Query: 160 agtggtatatcatccgcttcacctccaccaaatatccgattaagtaccaacgccaatctg 219
|||||||||||||| |||| | | ||| |||| ||||||||||||| |||||||| ||||
Sbjct: 322 agtggtatatcatctgctttatccccatcaaagatccgattaagtatcaacgccagtctg 381
Query: 220 attccagcctgcgctaacctcttctccacaatcgggtacctactgaaaaaataatcatct 279
||||||||||| ||||| |||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 382 attccagcctgtgctaatctcttctccacaatcgggtatctagtgaaaaaataatcatct 441
Score = 107 bits (54), Expect = 2e-021
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 278 ctcctagagtgatgtcttgctccacatctttgtaggcgtagttgcaggaataatggatgc 337
|||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 524 ctcctagagtaatgccttgctccacatctttgtaggcatagttgcaggaataatgaatgc 583
Query: 338 tctcaatcgcatag 351
||||||| ||||||
Sbjct: 584 tctcaattgcatag 597
Score = 40.1 bits (20), Expect = 0.41
Identities = 36/40 (90%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 22 ttacaaattcatgc-caatttattgatgtatagcaatgga 60
|||||||||||||| |||||||||| |||||| ||||||
Sbjct: 228 ttacaaattcatgctaaatttattgaagtataggaatgga 267
>gb|CW328627.1|CW328627 104_824_11479407_116_35983_050 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11479407, DNA
sequence
Length = 654
Score = 206 bits (104), Expect = 3e-051
Identities = 162/180 (90%), Gaps = 1/180 (0%)
Strand = Plus / Plus
Query: 101 aatggacaaatccttgtaatagctatgcttcctttt-attagagctgttactgtacttgt 159
||||||| ||||||||||||||||||||||| |||| |||| | ||||||||||||| ||
Sbjct: 234 aatggaccaatccttgtaatagctatgcttctttttcattacaactgttactgtactcgt 293
Query: 160 agtggtatatcatccgcttcacctccaccaaatatccgattaagtaccaacgccaatctg 219
|||||||||||||| |||| | | ||| |||| ||||||||||||| |||||||| ||||
Sbjct: 294 agtggtatatcatctgctttatccccatcaaagatccgattaagtatcaacgccagtctg 353
Query: 220 attccagcctgcgctaacctcttctccacaatcgggtacctactgaaaaaataatcatct 279
||||||||||| ||||| |||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 354 attccagcctgtgctaatctcttctccacaatcgggtatctagtgaaaaaataatcatct 413
Score = 107 bits (54), Expect = 2e-021
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 278 ctcctagagtgatgtcttgctccacatctttgtaggcgtagttgcaggaataatggatgc 337
|||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 496 ctcctagagtaatgccttgctccacatctttgtaggcatagttgcaggaataatgaatgc 555
Query: 338 tctcaatcgcatag 351
||||||| ||||||
Sbjct: 556 tctcaattgcatag 569
Score = 40.1 bits (20), Expect = 0.41
Identities = 36/40 (90%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 22 ttacaaattcatgc-caatttattgatgtatagcaatgga 60
|||||||||||||| |||||||||| |||||| ||||||
Sbjct: 200 ttacaaattcatgctaaatttattgaagtataggaatgga 239
>gb|CW328628.1|CW328628 104_824_11479407_148_35984_050 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11479407, DNA
sequence
Length = 665
Score = 167 bits (84), Expect = 3e-039
Identities = 123/136 (90%)
Strand = Plus / Minus
Query: 144 ctgttactgtacttgtagtggtatatcatccgcttcacctccaccaaatatccgattaag 203
||||||||||||| |||||||||||||||| |||| | | ||| |||| |||||||||||
Sbjct: 655 ctgttactgtactcgtagtggtatatcatctgctttatccccatcaaagatccgattaag 596
Query: 204 taccaacgccaatctgattccagcctgcgctaacctcttctccacaatcgggtacctact 263
|| |||||||| ||||||||||||||| ||||| |||||||||||||||||||| ||| |
Sbjct: 595 tatcaacgccagtctgattccagcctgtgctaatctcttctccacaatcgggtatctagt 536
Query: 264 gaaaaaataatcatct 279
||||||||||||||||
Sbjct: 535 gaaaaaataatcatct 520
Score = 139 bits (70), Expect = 6e-031
Identities = 88/94 (93%)
Strand = Plus / Minus
Query: 419 ctgtaagattcatcttgagagcctctaccatggtatccatgctcttgttgtagaagtcct 478
||||||| ||||||||||||| ||||||||| |||||||||||||| |||||||||||||
Sbjct: 126 ctgtaaggttcatcttgagagtctctaccatagtatccatgctcttattgtagaagtcct 67
Query: 479 tgatcgccgtatcaataatgctgacatcccacac 512
|||| |||||||| ||||||||||||||||||||
Sbjct: 66 tgattgccgtatctataatgctgacatcccacac 33
Score = 107 bits (54), Expect = 2e-021
Identities = 69/74 (93%)
Strand = Plus / Minus
Query: 278 ctcctagagtgatgtcttgctccacatctttgtaggcgtagttgcaggaataatggatgc 337
|||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 437 ctcctagagtaatgccttgctccacatctttgtaggcatagttgcaggaataatgaatgc 378
Query: 338 tctcaatcgcatag 351
||||||| ||||||
Sbjct: 377 tctcaattgcatag 364
Score = 46.1 bits (23), Expect = 0.007
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 361 caggtcgcgtgtttgttcttgcaattttcccagtggacgatgtcgtcagaccatccatc 419
||||| || |||||||||| ||||||||||||||| || || ||||||||||||||
Sbjct: 259 caggtggcatgtttgttctcgcaattttcccagtgagtaatatcatcagaccatccatc 201
>gb|CW122838.1|CW122838 104_501_11110890_148_34676_065 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11110890, DNA
sequence
Length = 543
Score = 153 bits (77), Expect = 4e-035
Identities = 116/129 (89%)
Strand = Plus / Minus
Query: 151 tgtacttgtagtggtatatcatccgcttcacctccaccaaatatccgattaagtaccaac 210
|||||| |||||||||||||||| |||| | | ||| |||| ||||||||||||| ||||
Sbjct: 543 tgtactcgtagtggtatatcatctgctttatccccatcaaagatccgattaagtatcaac 484
Query: 211 gccaatctgattccagcctgcgctaacctcttctccacaatcgggtacctactgaaaaaa 270
|||| ||||||||||||||| ||||| |||||||||||||||||||| ||| ||||||||
Sbjct: 483 gccagtctgattccagcctgtgctaatctcttctccacaatcgggtatctagtgaaaaaa 424
Query: 271 taatcatct 279
|||||||||
Sbjct: 423 taatcatct 415
Score = 107 bits (54), Expect = 2e-021
Identities = 69/74 (93%)
Strand = Plus / Minus
Query: 278 ctcctagagtgatgtcttgctccacatctttgtaggcgtagttgcaggaataatggatgc 337
|||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 332 ctcctagagtaatgccttgctccacatctttgtaggcatagttgcaggaataatgaatgc 273
Query: 338 tctcaatcgcatag 351
||||||| ||||||
Sbjct: 272 tctcaattgcatag 259
Score = 46.1 bits (23), Expect = 0.007
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 361 caggtcgcgtgtttgttcttgcaattttcccagtggacgatgtcgtcagaccatccatc 419
||||| || |||||||||| ||||||||||||||| || || ||||||||||||||
Sbjct: 154 caggtggcatgtttgttctcgcaattttcccagtgagtaatatcatcagaccatccatc 96
>gb|CB927880.1|CB927880 ABA1_34_F12.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_34_F12_A012 5', mRNA sequence
Length = 643
Score = 145 bits (73), Expect = 1e-032
Identities = 137/159 (86%), Gaps = 12/159 (7%)
Strand = Plus / Minus
Query: 911 ccgacaggtacttctcggcgatcttgcagaccatgatgtggccctcctttccccacgcgc 970
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 643 ccgacaggtacttctcggcgatcttgcagaccatgatgtggccctccttgccccacgcgt 584
Query: 971 cggcgaggggcggggcaaggaggagga------ggaggaagacgagtgggaacaggagca 1024
||||| |||| ||| | | |||||||| |||||||||||||||||||| ||||||
Sbjct: 583 cggcgcggggtgggacgacgaggaggaggaggaggaggaagacgagtgggaacgggagca 524
Query: 1025 gcgcccgctgctggtggtggggcgccatgtctctctgct 1063
|| ||||| ||||||||||||||||| |||||||
Sbjct: 523 gcacccgc------tggtggggcgccatgtccctctgct 491
>gb|BE362312.1|BE362312 DG1_85_C11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 112
Score = 123 bits (62), Expect = 4e-026
Identities = 98/110 (89%)
Strand = Plus / Minus
Query: 188 caaatatccgattaagtaccaacgccaatctgattccagcctgcgctaacctcttctcca 247
|||| ||||||||||||| |||||||| ||||||||||||||| || |||||||||||||
Sbjct: 110 caaagatccgattaagtatcaacgccagtctgattccagcctgtgcaaacctcttctcca 51
Query: 248 caatcgggtacctactgaaaaaataatcatctcctagagtgatgtcttgc 297
||| |||| | ||| |||||||||||||||||||||||| ||| |||||
Sbjct: 50 caaacgggaatctagggaaaaaataatcatctcctagagtaatgccttgc 1
>gb|CW101846.1|CW101846 104_469_11004877_148_34408_049 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11004877, DNA
sequence
Length = 645
Score = 119 bits (60), Expect = 6e-025
Identities = 124/146 (84%), Gaps = 12/146 (8%)
Strand = Plus / Minus
Query: 924 ctcggcgatcttgcagaccatgatgtggccctcctttccccacgcgccggcgaggggcgg 983
|||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||| ||
Sbjct: 563 ctcggcgatcttgcagaccatgatgtggccctccttgccccacgcgtcggcgcggggtgg 504
Query: 984 ggcaaggaggaggag------gaggaagacgagtgggaacaggagcagcgcccgctgctg 1037
| | | ||||||||| ||||||||||||||||||| |||||||| |||||
Sbjct: 503 gacgacgaggaggaggaggaggaggaagacgagtgggaacgggagcagcacccgc----- 449
Query: 1038 gtggtggggcgccatgtctctctgct 1063
||||||||||||||||| |||||||
Sbjct: 448 -tggtggggcgccatgtccctctgct 424
>gb|CF771871.1|CF771871 DSBF1_25_B10.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_25_B10_A010 3', mRNA sequence
Length = 300
Score = 95.6 bits (48), Expect = 8e-018
Identities = 97/112 (86%), Gaps = 1/112 (0%)
Strand = Plus / Minus
Query: 101 aatggacaaatccttgtaatagctatgcttcctttt-attagagctgttactgtacttgt 159
||||||| ||||||||||||||||||||||| |||| |||| | ||||||||||||| ||
Sbjct: 115 aatggaccaatccttgtaatagctatgcttctttttcattacaactgttactgtactcgt 56
Query: 160 agtggtatatcatccgcttcacctccaccaaatatccgattaagtaccaacg 211
|||||||||||||| |||| | | ||| | || |||||||| |||| |||||
Sbjct: 55 agtggtatatcatctgctttatccccatcgaagatccgattgagtatcaacg 4
Score = 40.1 bits (20), Expect = 0.41
Identities = 36/40 (90%), Gaps = 1/40 (2%)
Strand = Plus / Minus
Query: 22 ttacaaattcatgc-caatttattgatgtatagcaatgga 60
|||||||||||||| |||||||||| |||||| ||||||
Sbjct: 149 ttacaaattcatgctaaatttattgaagtataggaatgga 110
>gb|CW096428.1|CW096428 104_462_11001884_148_34355_080 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11001884, DNA
sequence
Length = 444
Score = 83.8 bits (42), Expect = 3e-014
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 592 agcggctggtggacgtcgccgacgaagtgtgccaggaacatcaggctctc 641
||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 440 agcggctggtggatgtcgccgacgaagtgcgccaggaacatcaggctctc 391
>gb|BG560294.1|BG560294 RHIZ2_72_E04.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 521
Score = 83.8 bits (42), Expect = 3e-014
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 592 agcggctggtggacgtcgccgacgaagtgtgccaggaacatcaggctctc 641
||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 507 agcggctggtggatgtcgccgacgaagtgcgccaggaacatcaggctctc 458
Score = 58.0 bits (29), Expect = 2e-006
Identities = 92/113 (81%)
Strand = Plus / Minus
Query: 862 ccgcccgccgactccggcagcagcgcctgcaccgccgccgccgccttctccgacaggtac 921
||||| ||| |||||||||||||| ||| |||||||| || |||| |||| ||| |
Sbjct: 243 ccgccggcccactccggcagcagctccttcaccgccgtcgaggcctcttccgtcagaaag 184
Query: 922 ttctcggcgatcttgcagaccatgatgtggccctcctttccccacgcgccggc 974
||||| ||||||||||| |||||| ||| |||||||| ||||| ||| ||||
Sbjct: 183 ttctcagcgatcttgcacaccatgtagtgcccctccttgccccatgcgtcggc 131
>gb|CX608242.1|CX608242 ANR1_37_B02.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_37_B02_A002 5', mRNA sequence
Length = 684
Score = 83.8 bits (42), Expect = 3e-014
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 592 agcggctggtggacgtcgccgacgaagtgtgccaggaacatcaggctctc 641
||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 501 agcggctggtggatgtcgccgacgaagtgcgccaggaacatcaggctctc 452
Score = 42.1 bits (21), Expect = 0.10
Identities = 90/113 (79%)
Strand = Plus / Minus
Query: 862 ccgcccgccgactccggcagcagcgcctgcaccgccgccgccgccttctccgacaggtac 921
||||| ||| || ||||||||||| ||| |||||||| || |||| |||| ||| |
Sbjct: 237 ccgccggcccaccccggcagcagctccttcaccgccgtcgaggcctcttccgtcagaaag 178
Query: 922 ttctcggcgatcttgcagaccatgatgtggccctcctttccccacgcgccggc 974
||||||||||| |||| |||||| ||| |||||||| ||||| ||| ||||
Sbjct: 177 ctctcggcgatcctgcacaccatgtagtgcccctccttgccccatgcgtcggc 125
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 500,144
Number of Sequences: 832831
Number of extensions: 500144
Number of successful extensions: 207225
Number of sequences better than 0.5: 269
Number of HSP's better than 0.5 without gapping: 269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 206156
Number of HSP's gapped (non-prelim): 724
length of query: 1074
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1054
effective length of database: 474,703,049
effective search space: 500337013646
effective search space used: 500337013646
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)