BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1716286.2.1
(1104 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CX606790.1|CX606790 ANR1_5_B01.b1_A002 Anaerobic roots S... 1211 0.0
gb|CX606881.1|CX606881 ANR1_5_B01.g1_A002 Anaerobic roots S... 1199 0.0
gb|DN551869.1|DN551869 pSPR-RT-MR-H1_F12_C273 pSPR Sorghum ... 1191 0.0
gb|CD428516.1|CD428516 ETH1_27_E11.b1_A002 Ethylene-treated... 1100 0.0
gb|BF586799.1|BF586799 FM1_30_E02.g1_A003 Floral-Induced Me... 1007 0.0
gb|BE362349.1|BE362349 DG1_86_B10.b1_A002 Dark Grown 1 (DG1... 961 0.0
gb|CD428630.1|CD428630 ETH1_27_E11.g1_A002 Ethylene-treated... 957 0.0
gb|BG559016.1|BG559016 RHIZ2_53_E07.g1_A003 Rhizome2 (RHIZ2... 955 0.0
gb|CF486080.1|CF486080 POL1_35_C09.g1_A002 Pollen Sorghum b... 942 0.0
gb|BF586678.1|BF586678 FM1_30_E02.b1_A003 Floral-Induced Me... 938 0.0
gb|BG241484.1|BG241484 RHIZ2_49_H05.g1_A003 Rhizome2 (RHIZ2... 900 0.0
gb|CD427769.1|CD427769 ETH1_34_G01.b1_A002 Ethylene-treated... 874 0.0
gb|CF770011.1|CF770011 DSBF1_5_D10.b1_A010 Drought-stressed... 842 0.0
gb|BG559023.1|BG559023 RHIZ2_53_F03.g1_A003 Rhizome2 (RHIZ2... 817 0.0
gb|CF770095.1|CF770095 DSBF1_5_D10.g1_A010 Drought-stressed... 817 0.0
gb|AW745172.1|AW745172 LG1_386_G05.g1_A002 Light Grown 1 (L... 803 0.0
gb|BE362469.1|BE362469 DG1_86_B10.g1_A002 Dark Grown 1 (DG1... 803 0.0
gb|BG465889.1|BG465889 RHIZ2_45_H03.g1_A003 Rhizome2 (RHIZ2... 803 0.0
gb|BG559333.1|BG559333 RHIZ2_53_E07.b1_A003 Rhizome2 (RHIZ2... 801 0.0
gb|BG465545.1|BG465545 RHIZ2_45_H03.b1_A003 Rhizome2 (RHIZ2... 720 0.0
gb|BG559341.1|BG559341 RHIZ2_53_F03.b1_A003 Rhizome2 (RHIZ2... 704 0.0
gb|BE352961.1|BE352961 DG1_1_D02.g1_A002 Dark Grown 1 (DG1)... 694 0.0
gb|BG241710.1|BG241710 RHIZ2_49_H05.b1_A003 Rhizome2 (RHIZ2... 670 0.0
gb|CF761219.1|CF761219 DSAF1_72_E10.b1_A011 Drought-stresse... 664 0.0
gb|CW105794.1|CW105794 104_475_11013068_116_34457_078 Sorgh... 498 e-139
gb|AW286703.2|AW286703 LG1_204_C06.b1_A002 Light Grown 1 (L... 470 e-130
gb|CD427858.1|CD427858 ETH1_34_G01.g1_A002 Ethylene-treated... 392 e-107
gb|AW923932.1|AW923932 WS1_31_G12.b1_A002 Water-stressed 1 ... 280 3e-073
gb|CD430066.1|CD430066 ETH1_13_H06.g1_A002 Ethylene-treated... 280 3e-073
gb|CN139896.1|CN139896 OX1_24_G04.g1_A002 Oxidatively-stres... 280 3e-073
gb|BG559265.1|BG559265 RHIZ2_52_F09.b1_A003 Rhizome2 (RHIZ2... 268 1e-069
gb|CD211812.1|CD211812 HS1_64_D06.g1_A012 Heat-shocked seed... 268 1e-069
gb|AW745521.1|AW745521 WS1_35_A05.b1_A002 Water-stressed 1 ... 264 2e-068
gb|BG463946.1|BG463946 EM1_52_G07.b1_A002 Embryo 1 (EM1) So... 264 2e-068
gb|CD222706.1|CD222706 CCC1_23_D07.g1_A007 Callus culture/c... 250 2e-064
gb|CN139818.1|CN139818 OX1_24_G04.b1_A002 Oxidatively-stres... 236 4e-060
gb|CW146670.1|CW146670 104_539_11139114_148_34987_069 Sorgh... 230 2e-058
gb|BG158055.1|BG158055 EM1_7_H04.b1_A002 Embryo 1 (EM1) Sor... 228 9e-058
gb|AW679757.1|AW679757 WS1_31_G12.g1_A002 Water-stressed 1 ... 202 5e-050
gb|BG464027.1|BG464027 EM1_52_G07.g1_A002 Embryo 1 (EM1) So... 198 8e-049
gb|CW147364.1|CW147364 104_540_11139473_148_34992_069 Sorgh... 196 3e-048
gb|CD222465.1|CD222465 CCC1_22_E06.b1_A007 Callus culture/c... 196 3e-048
gb|BE365066.1|BE365066 PI1_24_D07.b1_A002 Pathogen induced ... 186 3e-045
gb|BE365067.1|BE365067 PI1_24_D06.b1_A002 Pathogen induced ... 186 3e-045
gb|BE365076.1|BE365076 PI1_24_F07.b1_A002 Pathogen induced ... 186 3e-045
gb|BE365077.1|BE365077 PI1_24_F06.b1_A002 Pathogen induced ... 186 3e-045
gb|BE365080.1|BE365080 PI1_24_E07.b1_A002 Pathogen induced ... 186 3e-045
gb|BE365081.1|BE365081 PI1_24_E06.b1_A002 Pathogen induced ... 186 3e-045
gb|BE365095.1|BE365095 PI1_24_C06.b1_A002 Pathogen induced ... 186 3e-045
gb|CW069103.1|CW069103 104_318_10525635_1_30095 Sorghum met... 167 3e-039
gb|BG558946.1|BG558946 RHIZ2_52_F09.g1_A003 Rhizome2 (RHIZ2... 145 1e-032
gb|BE593616.1|BE593616 WS1_98_H01.b1_A002 Water-stressed 1 ... 125 9e-027
gb|CF771911.1|CF771911 DSBF1_26_A02.g9_A010 Drought-stresse... 121 1e-025
gb|AW563244.1|AW563244 LG1_204_C06.g1_A002 Light Grown 1 (L... 119 6e-025
gb|BE365068.1|BE365068 PI1_24_D05.b1_A002 Pathogen induced ... 119 6e-025
gb|CD211715.1|CD211715 HS1_64_D06.b1_A012 Heat-shocked seed... 109 6e-022
gb|CD221983.1|CD221983 CCC1_1_A01.b1_A007 Callus culture/ce... 105 9e-021
gb|CD222046.1|CD222046 CCC1_1_A01.g1_A007 Callus culture/ce... 101 1e-019
gb|BG049696.1|BG049696 EM1_7_H04.g1_A002 Embryo 1 (EM1) Sor... 88 2e-015
gb|CW301925.1|CW301925 104_785_11464455_116_36265_050 Sorgh... 76 8e-012
gb|CL161847.1|CL161847 104_353_10806005_116_31829_293 Sorgh... 70 5e-010
gb|CW042927.1|CW042927 104_277_10507398_114_30253 Sorghum m... 70 5e-010
gb|CW458302.1|CW458302 fsbb001f204i08f0 Sorghum methylation... 70 5e-010
gb|CW301926.1|CW301926 104_785_11464455_148_36266_050 Sorgh... 50 4e-004
gb|CW458303.1|CW458303 fsbb001f204i08k0 Sorghum methylation... 50 4e-004
gb|CW103172.1|CW103172 104_471_11011738_148_34423_035 Sorgh... 42 0.11
gb|CW475999.1|CW475999 fsbb001f232k08k0 Sorghum methylation... 40 0.42
gb|CW500161.1|CW500161 fsbb001f295f07k0 Sorghum methylation... 40 0.42
gb|CW500198.1|CW500198 fsbb001f295g07k0 Sorghum methylation... 40 0.42
gb|AW679495.1|AW679495 WS1_29_H07.g1_A002 Water-stressed 1 ... 40 0.42
gb|BG933157.1|BG933157 WS1_29_H07.b1_A002 Water-stressed 1 ... 40 0.42
gb|CD207335.1|CD207335 HS1_62_G06.g1_A012 Heat-shocked seed... 40 0.42
>gb|CX606790.1|CX606790 ANR1_5_B01.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_5_B01_A002 3', mRNA sequence
Length = 757
Score = 1211 bits (611), Expect = 0.0
Identities = 721/755 (95%), Gaps = 2/755 (0%)
Strand = Plus / Minus
Query: 272 gaagtgacaaatatattagagtaactgcaagttctaccacatatactgattagtcaaagg 331
|||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 757 gaagtgacaaatatattaaagtaacagcaagttctaccacagatactgattagtcaaagg 698
Query: 332 tgcccaaaggtaaagggaaccgaccacaggtgtacaaccaaacaattcagagtggtagtc 391
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 697 tgcccaaaggtaaagggaaccgaccatagttgtacaaccaaacaattcagagtggtagtc 638
Query: 392 atttagagacttcattccatggcaaatatctccagtctatttttatcaagcaaatggcaa 451
||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 637 atttagagacttccttccatggcaaatatctccagtctgtttttatcaagcaaatggcaa 578
Query: 452 cggattaggactgaagtatgatggggttattacaccaagaacagcactgcgctctcatgc 511
||||||||||||||||||| ||| |||||||| ||||||||| || | ||||||||
Sbjct: 577 tagattaggactgaagtatgacggg-ttattacatcaagaacagaaccaggttctcatgc 519
Query: 512 accgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacctcattgga 571
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 accgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacctcattggc 459
Query: 572 tttccagtgctttgcaatgttatcggagagagggtcatctggatttggtgcactcagtag 631
||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||
Sbjct: 458 tttccagtgctttgcaatgttatcggaaagagggtcatctggatttggcgcactcaggag 399
Query: 632 agcctgtatactcaaaagaactgttcgaatctgaagtgctgggctccatttgtccttgag 691
||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||
Sbjct: 398 agcctgtatactcaaaagaaccgtgcgaatctgaagtgccgggctccatttgtccttgag 339
Query: 692 aatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatcttggtcagaaa 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 aatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatcttggtcagaaa 279
Query: 752 cctaacctttggggcagccatgggatattcctcaggtaaaaagagttcaagcttaaaaac 811
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 278 cctaacctttggggcagccattggatattcctcgggtaaaaagagttcaagcttaaaaac 219
Query: 812 tccaccttcatagggcgactgcgccggcccaaggatcataacgttgaagtagcgcatgtt 871
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 tcccccttcatagggcgactgcgccggcccaaggatcataacgttgaagtagcgcatgtt 159
Query: 872 ctcctccgagggcgacgcgctgatccccggcgctggctcgctgagcagtcgctgcgtctc 931
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 158 ctcctccgagggcgacgcgctgatccccggtgctggctcgctgagcagccgctgcgtctc 99
Query: 932 cttgatgatccgccgcgggaggttgctgttggccatcggatcggggcc-gggtgcgggct 990
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 98 cttgatgatccgccgcgggaggttgctgttggccatcggatcggggccggggtgcgggct 39
Query: 991 tcctcctcaacaaagttgcggcgccggtgatgcct 1025
|||||||| | ||||||||||||||| |||||||
Sbjct: 38 tcctcctcggcgaagttgcggcgccggcgatgcct 4
>gb|CX606881.1|CX606881 ANR1_5_B01.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_5_B01_A002 5', mRNA sequence
Length = 819
Score = 1199 bits (605), Expect = 0.0
Identities = 731/770 (94%), Gaps = 6/770 (0%)
Strand = Plus / Minus
Query: 305 ctaccacatatactgattagtcaaaggtgcccaaaggtaaagggaaccgaccacaggtgt 364
|||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 819 ctaccacagatactgattagtcaaaggtgcccaaaggtaaagggaaccgaccatagttgt 760
Query: 365 acaaccaaacaattcagagtggtagtcatttagagacttcattccatggcaaatatctcc 424
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 759 acaaccaaacaattcagagtggtagtcatttagagacttccttccatggcaaatatctcc 700
Query: 425 agtctatttttatcaagcaaatggcaacggattaggactgaagtatgatggggttattac 484
||||| ||||||||||||||||||||| ||||||||||||||||||| ||| |||||||
Sbjct: 699 agtctgtttttatcaagcaaatggcaatagattaggactgaagtatgacggg-ttattac 641
Query: 485 accaagaacagcactgcgctctcatgcaccgctcgcatacaggcgagtccactccttggc 544
| ||||||||| || | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 atcaagaacagaaccaggttctcatgcaccgctcgcatacaggcgagtccactccttggc 581
Query: 545 tgtttcaacagcttctacctcattggatttccagtgctttgcaatgttatcggagagagg 604
|||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 580 tgtttcaacagcttctacctcattggctttccagtgctttgcaatgttatcggaaagagg 521
Query: 605 gtcatctggatttggtgcactcagtagagcctgtatactcaaaagaactgttcgaatctg 664
||||||||||||||| |||||||| ||||||||||||||||||||||| || ||||||||
Sbjct: 520 gtcatctggatttggcgcactcaggagagcctgtatactcaaaagaaccgtgcgaatctg 461
Query: 665 aagtgctgggctccatttgtccttgagaatgtcgaggcatatcctaccaagcttgtcaat 724
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 aagtgccgggctccatttgtccttgagaatgtcgaggcatatcctaccaagcttgtcaat 401
Query: 725 gttgggatgataaatcttggtcagaaacctaacctttggggcagccatgggatattcctc 784
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 400 gttgggatgataaatcttggtcagaaacctaacctttggggcagccattggatattcctc 341
Query: 785 aggtaaaaagagttcaagcttaaaaactccaccttcatagggcgactgcgccggcccaag 844
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 340 gggtaaaaagagttcaagcttaaaaactcccccttcatagggcgactgcgccggcccaag 281
Query: 845 gatcataacgttgaagtagcgcatgttctcctccgagggcgacgcgctgatccccggcgc 904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 280 gatcataacgttgaagtagcgcatgttctcctccgagggcgacgcgctgatccccggtgc 221
Query: 905 tggctcgctgagcagtcgctgcgtctccttgatgatccgccgcgggaggttgctgttggc 964
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 tggctcgctgagcagccgctgcgtctccttgatgatccgccgcgggaggttgctgttggc 161
Query: 965 catcggatcggggcc-gggtgcgggcttcctcctcaacaaagttgcggcgccggtgatgc 1023
||||||||||||||| ||||||||||||||||||| | ||||||||||||||| |||||
Sbjct: 160 catcggatcggggccggggtgcgggcttcctcctcggcgaagttgcggcgccggcgatgc 101
Query: 1024 ctcgaggatggcgcggggaaaggaggagcagcagccggtcggggtgggga 1073
|| |||||||||||||| ||||||| ||||| |||||||||||||||
Sbjct: 100 cttgaggatggcgcggg----ggaggaggagcagtcggtcggggtgggga 55
>gb|DN551869.1|DN551869 pSPR-RT-MR-H1_F12_C273 pSPR Sorghum propinquum cDNA, mRNA sequence
Length = 779
Score = 1191 bits (601), Expect = 0.0
Identities = 718/753 (95%), Gaps = 3/753 (0%)
Strand = Plus / Plus
Query: 303 ttctaccacatatactgattagtcaaaggtgcccaaaggtaaagggaaccgaccacaggt 362
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 23 ttctaccacagatactgattagtcaaaggtgcccaaaggtaaagggaaccgaccatagtt 82
Query: 363 gtacaaccaaacaattcagagtggtagtcatttagagacttcattccatggcaaatatct 422
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 83 gtacaaccaaacaattcagagtggtagtcatttagagacttccttccatggcaaatatct 142
Query: 423 ccagtctatttttatcaagcaaatggcaacggattaggactgaagtatgatggggttatt 482
|||||| ||||||||||||||||||||| ||||||||||||||||||| || |||||
Sbjct: 143 tcagtctgtttttatcaagcaaatggcaatagattaggactgaagtatgacagg-ttatt 201
Query: 483 acaccaagaacagcactgcgctctcatgcaccgctcgcatacaggcgagtccactccttg 542
||| ||||||||| || | | |||||||||||||||||||||||||||||||||||||||
Sbjct: 202 acatcaagaacagaaccgggttctcatgcaccgctcgcatacaggcgagtccactccttg 261
Query: 543 gctgtttcaacagcttctacctcattggatttccagtgctttgcaatgttatcggagaga 602
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 262 gctgtttcaacagcttctacctcattggctttccagtgctttgcaatgttatcggaaaga 321
Query: 603 gggtcatctggatttggtgcactcagtagagcctgtatactcaaaagaactgttcgaatc 662
||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 322 gggtcatctggatttggcgcactcaggagagcctgtatactcaaaagaaccgttcgaatc 381
Query: 663 tgaagtgctgggctccatttgtccttgagaatgtcgaggcatatcctaccaagcttgtca 722
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tgaagtgccgggctccatttgtccttgagaatgtcgaggcatatcctaccaagcttgtca 441
Query: 723 atgttgggatgataaatcttggtcagaaacctaacctttggggcagccatgggatattcc 782
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 442 atgttgggatgataaatcttggtcagaaacctaacctttggggcagccattggatattcc 501
Query: 783 tcaggtaaaaagagttcaagcttaaaaactccaccttcatagggcgactgcgccggccca 842
|| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 502 tcgggtaaaaagagttcaagcttaaaaactcccccttcatagggcgactgcgccggccca 561
Query: 843 aggatcataacgttgaagtagcgcatgttctcctccgagggcgacgcgctgatccccggc 902
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 aggatcataacgttgaagtagcgcatgttctcctccgagggcgacgcgctgatccccggt 621
Query: 903 gctggctcgctgagcagtcgctgcgtctccttgatgatccgccgcgggaggttgctgttg 962
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gctggctcgctgagcagccgctgcgtctccttgatgatccgccgcgggaggttgctgttg 681
Query: 963 gccatcggatcggggcc-gggtgcgggcttcctcctcaacaaagttgcggcgccggtgat 1021
||||||||||||||||| ||||||||||||||||||| | ||||||||||||||| |||
Sbjct: 682 gccatcggatcggggccggggtgcgggcttcctcctcggcgaagttgcggcgccggcgat 741
Query: 1022 gcctcgaggatggcgcggggaaaggaggagcag 1054
|||| ||||||||||||||| |||||||||||
Sbjct: 742 gccttgaggatggcgcgggg-gaggaggagcag 773
>gb|CD428516.1|CD428516 ETH1_27_E11.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_27_E11_A002 3', mRNA sequence
Length = 678
Score = 1100 bits (555), Expect = 0.0
Identities = 649/679 (95%), Gaps = 1/679 (0%)
Strand = Plus / Minus
Query: 262 tcttctacatgaagtgacaaatatattagagtaactgcaagttctaccacatatactgat 321
|||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||
Sbjct: 678 tcttctacatgaagtgacaaatatattaaagtaacagcaagttctaccacagatactgat 619
Query: 322 tagtcaaaggtgcccaaaggtaaagggaaccgaccacaggtgtacaaccaaacaattcag 381
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 618 tagtcaaaggtgcccaaaggtaaagggaaccgaccatagttgtacaaccaaacaattcag 559
Query: 382 agtggtagtcatttagagacttcattccatggcaaatatctccagtctatttttatcaag 441
||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 558 agtggtagtcatttagagacttccttccatggcaaatatctccagtctgtttttatcaag 499
Query: 442 caaatggcaacggattaggactgaagtatgatggggttattacaccaagaacagcactgc 501
|||||||||| ||||||||||||||||||| ||| |||||||| ||||||||| ||
Sbjct: 498 caaatggcaatagattaggactgaagtatgacggg-ttattacatcaagaacagaaccag 440
Query: 502 gctctcatgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagcttcta 561
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gttctcatgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagcttcta 380
Query: 562 cctcattggatttccagtgctttgcaatgttatcggagagagggtcatctggatttggtg 621
||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 379 cctcattggctttccagtgctttgcaatgttatcggaaagagggtcatctggatttggcg 320
Query: 622 cactcagtagagcctgtatactcaaaagaactgttcgaatctgaagtgctgggctccatt 681
||||||| ||||||||||||||||||||||| || |||||||||||||| ||||||||||
Sbjct: 319 cactcaggagagcctgtatactcaaaagaaccgtgcgaatctgaagtgccgggctccatt 260
Query: 682 tgtccttgagaatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatct 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tgtccttgagaatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatct 200
Query: 742 tggtcagaaacctaacctttggggcagccatgggatattcctcaggtaaaaagagttcaa 801
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 199 tggtcagaaacctaacctttggggcagccattggatattcctcgggtaaaaagagttcaa 140
Query: 802 gcttaaaaactccaccttcatagggcgactgcgccggcccaaggatcataacgttgaagt 861
||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 gcttaaaaactccccctttatagggcgactgcgccggcccaaggatcataacgttgaagt 80
Query: 862 agcgcatgttctcctccgagggcgacgcgctgatccccggcgctggctcgctgagcagtc 921
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 79 agcgcatgttctcctccgagggcgacgcgctgatccccggtgctggctcgctgagcagcc 20
Query: 922 gctgcgtctccttgatgat 940
|||||||||||||||||||
Sbjct: 19 gctgcgtctccttgatgat 1
>gb|BF586799.1|BF586799 FM1_30_E02.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 619
Score = 1007 bits (508), Expect = 0.0
Identities = 590/616 (95%), Gaps = 1/616 (0%)
Strand = Plus / Minus
Query: 304 tctaccacatatactgattagtcaaaggtgcccaaaggtaaagggaaccgaccacaggtg 363
||||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 619 tctaccacagatactgattagtcaaaggtgcccaaaggtaaagggaaccgaccatagttg 560
Query: 364 tacaaccaaacaattcagagtggtagtcatttagagacttcattccatggcaaatatctc 423
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 559 tacaaccaaacaattcagagtggtagtcatttagagacttccttccatggcaaatatctt 500
Query: 424 cagtctatttttatcaagcaaatggcaacggattaggactgaagtatgatggggttatta 483
|||||| ||||||||||||||||||||| ||||||||||||||||||| || ||||||
Sbjct: 499 cagtctgtttttatcaagcaaatggcaatagattaggactgaagtatgacagg-ttatta 441
Query: 484 caccaagaacagcactgcgctctcatgcaccgctcgcatacaggcgagtccactccttgg 543
|| ||||||||| || | | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 catcaagaacagaaccgggttctcatgcaccgctcgcatacaggcgagtccactccttgg 381
Query: 544 ctgtttcaacagcttctacctcattggatttccagtgctttgcaatgttatcggagagag 603
||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 380 ctgtttcaacagcttctacctcattggctttccagtgctttgcaatgttatcggaaagag 321
Query: 604 ggtcatctggatttggtgcactcagtagagcctgtatactcaaaagaactgttcgaatct 663
|||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 320 ggtcatctggatttggcgcactcaggagagcctgtatactcaaaagaaccgttcgaatct 261
Query: 664 gaagtgctgggctccatttgtccttgagaatgtcgaggcatatcctaccaagcttgtcaa 723
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gaagtgccgggctccatttgtccttgagaatgtcgaggcatatcctaccaagcttgtcaa 201
Query: 724 tgttgggatgataaatcttggtcagaaacctaacctttggggcagccatgggatattcct 783
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 200 tgttgggatgataaatcttggtcagaaacctaacctttggggcagccattggatattcct 141
Query: 784 caggtaaaaagagttcaagcttaaaaactccaccttcatagggcgactgcgccggcccaa 843
| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 140 cgggtaaaaagagttcaagcttaaaaactcccccttcatagggcgactgcgccggcccaa 81
Query: 844 ggatcataacgttgaagtagcgcatgttctcctccgagggcgacgcgctgatccccggcg 903
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 80 ggatcataacgttgaagtagcgcatgttctcctccgagggcgacgcgctgatccccggtg 21
Query: 904 ctggctcgctgagcag 919
||||||||||||||||
Sbjct: 20 ctggctcgctgagcag 5
>gb|BE362349.1|BE362349 DG1_86_B10.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 605
Score = 961 bits (485), Expect = 0.0
Identities = 577/605 (95%), Gaps = 2/605 (0%)
Strand = Plus / Minus
Query: 431 tttttatcaagcaaatggcaacggattaggactgaagtatgatggggttattacaccaag 490
||||||||||||||||||||| ||||||||||||||||||| ||| |||||||| ||||
Sbjct: 604 tttttatcaagcaaatggcaatagattaggactgaagtatgacggg-ttattacatcaag 546
Query: 491 aacagcactgcgctctcatgcaccgctcgcatacaggcgagtccactccttggctgtttc 550
||||| || | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 aacagaaccaggttctcatgcaccgctcgcatacaggcgagtccactccttggctgtttc 486
Query: 551 aacagcttctacctcattggatttccagtgctttgcaatgttatcggagagagggtcatc 610
|||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 485 aacagcttctacctcattggctttccagtgctttgcaatgttatcggaaagagggtcatc 426
Query: 611 tggatttggtgcactcagtagagcctgtatactcaaaagaactgttcgaatctgaagtgc 670
||||||||| |||||||| ||||||||||||||||||||||| || ||||||||||||||
Sbjct: 425 tggatttggcgcactcaggagagcctgtatactcaaaagaaccgtgcgaatctgaagtgc 366
Query: 671 tgggctccatttgtccttgagaatgtcgaggcatatcctaccaagcttgtcaatgttggg 730
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 cgggctccatttgtccttgagaatgtcgaggcatatcctaccaagcttgtcaatgttggg 306
Query: 731 atgataaatcttggtcagaaacctaacctttggggcagccatgggatattcctcaggtaa 790
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 305 atgataaatcttggtcagaaacctaacctttggggcagccattggatattcctcgggtaa 246
Query: 791 aaagagttcaagcttaaaaactccaccttcatagggcgactgcgccggcccaaggatcat 850
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 245 aaagagttcaagcttaaaaactcccccttcatagggcgactgcgccggcccaaggatcat 186
Query: 851 aacgttgaagtagcgcatgttctcctccgagggcgacgcgctgatccccggcgctggctc 910
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 185 aacgttgaagtagcgcatgttctcctccgagggcgacgcgctgatccccggtgctggctc 126
Query: 911 gctgagcagtcgctgcgtctccttgatgatccgccgcgggaggttgctgttggccatcgg 970
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 gctgagcagccgctgcgtctccttgatgatccgccgcgggaggttgctgttggccatcgg 66
Query: 971 atcggggcc-gggtgcgggcttcctcctcaacaaagttgcggcgccggtgatgcctcgag 1029
||||||||| ||||||||||||||||||| | ||||||||||||||| ||||||| |||
Sbjct: 65 atcggggccggggtgcgggcttcctcctcggcgaagttgcggcgccggcgatgccttgag 6
Query: 1030 gatgg 1034
|||||
Sbjct: 5 gatgg 1
>gb|CD428630.1|CD428630 ETH1_27_E11.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_27_E11_A002 5', mRNA sequence
Length = 703
Score = 957 bits (483), Expect = 0.0
Identities = 604/640 (94%), Gaps = 7/640 (1%)
Strand = Plus / Minus
Query: 436 atcaagcaaatggcaacggattaggactgaagtatgatggggttattacaccaagaacag 495
|||||||||||||||| ||||||||||||||||||| ||| |||||||| |||||||||
Sbjct: 703 atcaagcaaatggcaatagattaggactgaagtatgacggg-ttattacatcaagaacag 645
Query: 496 cactgcgctctcatgcaccgctcgcatacaggcgagtccactccttggctgtttcaacag 555
|| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 aaccaggttctcatgcaccgctcgcatacaggcgagtccactccttggctgtttcaacag 585
Query: 556 cttctacctcattggatttccagtgctttgcaatgttatcggagagagggtcatctggat 615
||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 584 cttctacctcattggctttccagtgctttgcaatgttatcggaaagagggtcatctggat 525
Query: 616 ttggtgcactcagtagagcctgtatactcaaaagaactgttcgaatctgaagtgctgggc 675
|||| |||||||| ||||||||||||||||||||||| || |||||||||||||| ||||
Sbjct: 524 ttggcgcactcaggagagcctgtatactcaaaagaaccgtgcgaatctgaagtgccgggc 465
Query: 676 tccatttgtccttgagaatgtcgaggcatatcctaccaagcttgtcaatgttgggatgat 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 tccatttgtccttgagaatgtcgaggcatatcctaccaagcttgtcaatgttgggatgat 405
Query: 736 aaatcttggtcagaaacctaacctttggggcag-ccatgggatattcctcaggtaaaaag 794
||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||
Sbjct: 404 aaatcttggtcagaaacctaacctttggggcagcccattggatattcctcgggtaaaaag 345
Query: 795 agttcaagcttaaaaactccaccttcatagggcgactgcgccggcccaaggatcataacg 854
|||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 344 agttcaagcttaaaaactccccctttatagggcgactgcgccggcccaaggatcataacg 285
Query: 855 ttgaagtagcgcatgttctcctccgagggcgacgcgctgatccccggcgctggctcgctg 914
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 284 ttgaagtagcgcatgttctcctccgagggcgacgcgctgatccccggtgctggctcgctg 225
Query: 915 agcagtcgctgcgtctccttgatgatccgccgcgggaggttgctgttggccatcggatcg 974
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 agcagccgctgcgtctccttgatgatccgccgcgggaggttgctgttggccatcggatcg 165
Query: 975 gggcc-gggtgcgggcttcctcctcaacaaagttgcggcgccggtgatgcctcgaggatg 1033
||||| ||||||||||||||||||| | ||||||||||||||| ||||||| |||||||
Sbjct: 164 gggccggggtgcgggcttcctcctcggcgaagttgcggcgccggcgatgccttgaggatg 105
Query: 1034 gcgcggggaaaggaggagcagcagccggtcggggtgggga 1073
||||||| ||||||| ||||| |||||||||||||||
Sbjct: 104 gcgcggg----ggaggaggagcagtcggtcggggtgggga 69
>gb|BG559016.1|BG559016 RHIZ2_53_E07.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 631
Score = 955 bits (482), Expect = 0.0
Identities = 567/594 (95%), Gaps = 1/594 (0%)
Strand = Plus / Minus
Query: 274 agtgacaaatatattagagtaactgcaagttctaccacatatactgattagtcaaaggtg 333
|||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 593 agtgacaaatatattaaagtaacagcaagttctaccacagatactgattagtcaaaggtg 534
Query: 334 cccaaaggtaaagggaaccgaccacaggtgtacaaccaaacaattcagagtggtagtcat 393
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 533 cccaaaggtaaagggaaccgaccatagttgtacaaccaaacaattcagagtggtagtcat 474
Query: 394 ttagagacttcattccatggcaaatatctccagtctatttttatcaagcaaatggcaacg 453
||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 473 ttagagacttccttccatggcaaatatcttcagtctgtttttatcaagcaaatggcaata 414
Query: 454 gattaggactgaagtatgatggggttattacaccaagaacagcactgcgctctcatgcac 513
||||||||||||||||||| || |||||||| ||||||||| || | | ||||||||||
Sbjct: 413 gattaggactgaagtatgacagg-ttattacatcaagaacagaaccgggttctcatgcac 355
Query: 514 cgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacctcattggatt 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 354 cgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacctcattggctt 295
Query: 574 tccagtgctttgcaatgttatcggagagagggtcatctggatttggtgcactcagtagag 633
||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||
Sbjct: 294 tccagtgctttgcaatgttatcggaaagagggtcatctggatttggcgcactcaggagag 235
Query: 634 cctgtatactcaaaagaactgttcgaatctgaagtgctgggctccatttgtccttgagaa 693
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 234 cctgtatactcaaaagaaccgttcgaatctgaagtgccgggctccatttgtccttgagaa 175
Query: 694 tgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatcttggtcagaaacc 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 tgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatcttggtcagaaacc 115
Query: 754 taacctttggggcagccatgggatattcctcaggtaaaaagagttcaagcttaaaaactc 813
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 114 taacctttggggcagccattggatattcctcgggtaaaaagagttcaagcttaaaaactc 55
Query: 814 caccttcatagggcgactgcgccggcccaaggatcataacgttgaagtagcgca 867
| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 ccccttcatagggcgactgcgccggcccaaggatcataacgttgaagtagcgca 1
>gb|CF486080.1|CF486080 POL1_35_C09.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_35_C09_A002 5', mRNA sequence
Length = 609
Score = 942 bits (475), Expect = 0.0
Identities = 570/600 (95%), Gaps = 5/600 (0%)
Strand = Plus / Minus
Query: 475 gggttattacaccaagaacagcactgcgctctcatgcaccgctcgcatacaggcgagtcc 534
||||||||||| ||||||||| || | |||||||||||||||||||||||||||||||
Sbjct: 599 gggttattacatcaagaacagaaccaggttctcatgcaccgctcgcatacaggcgagtcc 540
Query: 535 actccttggctgtttcaacagcttctacctcattggatttccagtgctttgcaatgttat 594
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 539 actccttggctgtttcaacagcttctacctcattggctttccagtgctttgcaatgttat 480
Query: 595 cggagagagggtcatctggatttggtgcactcagtagagcctgtatactcaaaagaactg 654
|||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||| |
Sbjct: 479 cggaaagagggtcatctggatttggcgcactcaggagagcctgtatactcaaaagaaccg 420
Query: 655 ttcgaatctgaagtgctgggctccatttgtccttgagaatgtcgaggcatatcctaccaa 714
| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 tgcgaatctgaagtgccgggctccatttgtccttgagaatgtcgaggcatatcctaccaa 360
Query: 715 gcttgtcaatgttgggatgataaatcttggtcagaaacctaacctttggggcagccatgg 774
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 359 gcttgtcaatgttgggatgataaatcttggtcagaaacctaacctttggggcagccattg 300
Query: 775 gatattcctcaggtaaaaagagttcaagcttaaaaactccaccttcatagggcgactgcg 834
|||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 299 gatattcctcgggtaaaaagagttcaagcttaaaaactcccccttcatagggcgactgcg 240
Query: 835 ccggcccaaggatcataacgttgaagtagcgcatgttctcctccgagggcgacgcgctga 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 ccggcccaaggatcataacgttgaagtagcgcatgttctcctccgagggcgacgcgctga 180
Query: 895 tccccggcgctggctcgctgagcagtcgctgcgtctccttgatgatccgccgcgggaggt 954
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 179 tccccggtgctggctcgctgagcagccgctgcgtctccttgatgatccgccgcgggaggt 120
Query: 955 tgctgttggccatcggatcggggcc-gggtgcgggcttcctcctcaacaaagttgcggcg 1013
||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||
Sbjct: 119 tgctgttggccatcggatcggggccggggtgcgggcttcctcctcggcgaagttgcggcg 60
Query: 1014 ccggtgatgcctcgaggatggcgcggggaaaggaggagcagcagccggtcggggtgggga 1073
|||| ||||||| |||||||||||||| ||||||| ||||| |||||||||||||||
Sbjct: 59 ccggcgatgccttgaggatggcgcggg----ggaggaggagcagtcggtcggggtgggga 4
>gb|BF586678.1|BF586678 FM1_30_E02.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 571
Score = 938 bits (473), Expect = 0.0
Identities = 547/569 (96%), Gaps = 2/569 (0%)
Strand = Plus / Minus
Query: 431 tttttatcaagcaaatggcaacggattaggactgaagtatgatggggttattacaccaag 490
||||||||||||||||||||| ||||||||||||||||||| || |||||||| ||||
Sbjct: 571 tttttatcaagcaaatggcaatagattaggactgaagtatgacagg-ttattacatcaag 513
Query: 491 aacagcactgcgctctcatgcaccgctcgcatacaggcgagtccactccttggctgtttc 550
||||| || | | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 aacagaaccgggttctcatgcaccgctcgcatacaggcgagtccactccttggctgtttc 453
Query: 551 aacagcttctacctcattggatttccagtgctttgcaatgttatcggagagagggtcatc 610
|||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 452 aacagcttctacctcattggctttccagtgctttgcaatgttatcggaaagagggtcatc 393
Query: 611 tggatttggtgcactcagtagagcctgtatactcaaaagaactgttcgaatctgaagtgc 670
||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 392 tggatttggcgcactcaggagagcctgtatactcaaaagaaccgttcgaatctgaagtgc 333
Query: 671 tgggctccatttgtccttgagaatgtcgaggcatatcctaccaagcttgtcaatgttggg 730
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 cgggctccatttgtccttgagaatgtcgaggcatatcctaccaagcttgtcaatgttggg 273
Query: 731 atgataaatcttggtcagaaacctaacctttggggcagccatgggatattcctcaggtaa 790
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 272 atgataaatcttggtcagaaacctaacctttggggcagccattggatattcctcgggtaa 213
Query: 791 aaagagttcaagcttaaaaactccaccttcatagggcgactgcgccggcccaaggatcat 850
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 212 aaagagttcaagcttaaaaactcccccttcatagggcgactgcgccggcccaaggatcat 153
Query: 851 aacgttgaagtagcgcatgttctcctccgagggcgacgcgctgatccccggcgctggctc 910
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 152 aacgttgaagtagcgcatgttctcctccgagggcgacgcgctgatccccggtgctggctc 93
Query: 911 gctgagcagtcgctgcgtctccttgatgatccgccgcgggaggttgctgttggccatcgg 970
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 gctgagcagccgctgcgtctccttgatgatccgccgcgggaggttgctgttggccatcgg 33
Query: 971 atcggggcc-gggtgcgggcttcctcctc 998
||||||||| |||||||||||||||||||
Sbjct: 32 atcggggccggggtgcgggcttcctcctc 4
>gb|BG241484.1|BG241484 RHIZ2_49_H05.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 553
Score = 900 bits (454), Expect = 0.0
Identities = 530/554 (95%), Gaps = 1/554 (0%)
Strand = Plus / Minus
Query: 320 attagtcaaaggtgcccaaaggtaaagggaaccgaccacaggtgtacaaccaaacaattc 379
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 553 attagtcaaaggtgcccaaaggtaaagggaaccgaccatagttgtacaaccaaacaattc 494
Query: 380 agagtggtagtcatttagagacttcattccatggcaaatatctccagtctatttttatca 439
||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||
Sbjct: 493 agagtggtagtcatttagagacttccttccatggcaaatatcttcagtctgtttttatca 434
Query: 440 agcaaatggcaacggattaggactgaagtatgatggggttattacaccaagaacagcact 499
|||||||||||| ||||||||||||||||||| || |||||||| ||||||||| ||
Sbjct: 433 agcaaatggcaatagattaggactgaagtatgacagg-ttattacatcaagaacagaacc 375
Query: 500 gcgctctcatgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagcttc 559
| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gggttctcatgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagcttc 315
Query: 560 tacctcattggatttccagtgctttgcaatgttatcggagagagggtcatctggatttgg 619
||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 314 tacctcattggctttccagtgctttgcaatgttatcggaaagagggtcatctggatttgg 255
Query: 620 tgcactcagtagagcctgtatactcaaaagaactgttcgaatctgaagtgctgggctcca 679
|||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 254 cgcactcaggagagcctgtatactcaaaagaaccgttcgaatctgaagtgccgggctcca 195
Query: 680 tttgtccttgagaatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaat 739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 tttgtccttgagaatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaat 135
Query: 740 cttggtcagaaacctaacctttggggcagccatgggatattcctcaggtaaaaagagttc 799
||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 134 cttggtcagaaacctaacctttggggcagccattggatattcctcgggtaaaaagagttc 75
Query: 800 aagcttaaaaactccaccttcatagggcgactgcgccggcccaaggatcataacgttgaa 859
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 aagcttaaaaactcccccttcatagggcgactgcgccggcccaaggatcataacgttgaa 15
Query: 860 gtagcgcatgttct 873
||||||||||||||
Sbjct: 14 gtagcgcatgttct 1
>gb|CD427769.1|CD427769 ETH1_34_G01.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_34_G01_A002 3', mRNA sequence
Length = 552
Score = 874 bits (441), Expect = 0.0
Identities = 526/553 (95%), Gaps = 1/553 (0%)
Strand = Plus / Minus
Query: 272 gaagtgacaaatatattagagtaactgcaagttctaccacatatactgattagtcaaagg 331
|||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 552 gaagtgacaaatatattaaagtaacagcaagttctaccacagatactgattagtcaaagg 493
Query: 332 tgcccaaaggtaaagggaaccgaccacaggtgtacaaccaaacaattcagagtggtagtc 391
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 492 tgcccaaaggtaaagggaaccgaccatagttgtacaaccaaacaattcagagtggtagtc 433
Query: 392 atttagagacttcattccatggcaaatatctccagtctatttttatcaagcaaatggcaa 451
||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 432 atttagagacttccttccatggcaaatatctccagtctgtttttatcaagcaaatggcaa 373
Query: 452 cggattaggactgaagtatgatggggttattacaccaagaacagcactgcgctctcatgc 511
||||||||||||||||||| ||| |||||||| ||||||||| || | ||||||||
Sbjct: 372 tagattaggactgaagtatgacggg-ttattacatcaagaacagaaccaggttctcatgc 314
Query: 512 accgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacctcattgga 571
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 accgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacctcattggc 254
Query: 572 tttccagtgctttgcaatgttatcggagagagggtcatctggatttggtgcactcagtag 631
||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||
Sbjct: 253 tttccagtgctttgcaatgttatcggaaagagggtcatctggatttggcgcactcaggag 194
Query: 632 agcctgtatactcaaaagaactgttcgaatctgaagtgctgggctccatttgtccttgag 691
||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||
Sbjct: 193 agcctgtatactcaaaagaaccgtgcgaatctgaagtgccgggctccatttgtccttgag 134
Query: 692 aatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatcttggtcagaaa 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 aatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatcttggtcagaaa 74
Query: 752 cctaacctttggggcagccatgggatattcctcaggtaaaaagagttcaagcttaaaaac 811
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 73 cctaacctttggggcagccattggatattcctcgggtaaaaagagttcaagcttaaaaac 14
Query: 812 tccaccttcatag 824
||| |||||||||
Sbjct: 13 tcccccttcatag 1
>gb|CF770011.1|CF770011 DSBF1_5_D10.b1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_5_D10_A010 5', mRNA sequence
Length = 534
Score = 842 bits (425), Expect = 0.0
Identities = 507/533 (95%), Gaps = 1/533 (0%)
Strand = Plus / Minus
Query: 267 tacatgaagtgacaaatatattagagtaactgcaagttctaccacatatactgattagtc 326
||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||
Sbjct: 532 tacatgaagtgacaaatatattaaagtaacagcaagttctaccacagatactgattagtc 473
Query: 327 aaaggtgcccaaaggtaaagggaaccgaccacaggtgtacaaccaaacaattcagagtgg 386
||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 472 aaaggtgcccaaaggtaaagggaaccgaccatagttgtacaaccaaacaattcagagtgg 413
Query: 387 tagtcatttagagacttcattccatggcaaatatctccagtctatttttatcaagcaaat 446
|||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 412 tagtcatttagagacttccttccatggcaaatatctccagtctgtttttatcaagcaaat 353
Query: 447 ggcaacggattaggactgaagtatgatggggttattacaccaagaacagcactgcgctct 506
||||| ||||||||||||||||||| ||| |||||||| ||||||||| || | |||
Sbjct: 352 ggcaatagattaggactgaagtatgacggg-ttattacatcaagaacagaaccaggttct 294
Query: 507 catgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacctca 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 catgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacctca 234
Query: 567 ttggatttccagtgctttgcaatgttatcggagagagggtcatctggatttggtgcactc 626
|||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 233 ttggctttccagtgctttgcaatgttatcggaaagagggtcatctggatttggcgcactc 174
Query: 627 agtagagcctgtatactcaaaagaactgttcgaatctgaagtgctgggctccatttgtcc 686
|| ||||||||||||||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 173 aggagagcctgtatactcaaaagaaccgtgcgaatctgaagtgccgggctccatttgtcc 114
Query: 687 ttgagaatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatcttggtc 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 ttgagaatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatcttggtc 54
Query: 747 agaaacctaacctttggggcagccatgggatattcctcaggtaaaaagagttc 799
|||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 53 agaaacctaacctttggggcagccattggatattcctcgggtaaaaagagttc 1
>gb|BG559023.1|BG559023 RHIZ2_53_F03.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 515
Score = 817 bits (412), Expect = 0.0
Identities = 491/516 (95%), Gaps = 1/516 (0%)
Strand = Plus / Minus
Query: 268 acatgaagtgacaaatatattagagtaactgcaagttctaccacatatactgattagtca 327
|||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||
Sbjct: 515 acatgaagtgacaaatatattaaagtaacagcaagttctaccacagatactgattagtca 456
Query: 328 aaggtgcccaaaggtaaagggaaccgaccacaggtgtacaaccaaacaattcagagtggt 387
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 455 aaggtgcccaaaggtaaagggaaccgaccatagttgtacaaccaaacaattcagagtggt 396
Query: 388 agtcatttagagacttcattccatggcaaatatctccagtctatttttatcaagcaaatg 447
||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 395 agtcatttagagacttccttccatggcaaatatcttcagtctgtttttatcaagcaaatg 336
Query: 448 gcaacggattaggactgaagtatgatggggttattacaccaagaacagcactgcgctctc 507
|||| ||||||||||||||||||| || |||||||| ||||||||| || | | ||||
Sbjct: 335 gcaatagattaggactgaagtatgacagg-ttattacatcaagaacagaaccgggttctc 277
Query: 508 atgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacctcat 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 atgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacctcat 217
Query: 568 tggatttccagtgctttgcaatgttatcggagagagggtcatctggatttggtgcactca 627
||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 216 tggctttccagtgctttgcaatgttatcggaaagagggtcatctggatttggcgcactca 157
Query: 628 gtagagcctgtatactcaaaagaactgttcgaatctgaagtgctgggctccatttgtcct 687
| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 156 ggagagcctgtatactcaaaagaaccgttcgaatctgaagtgccgggctccatttgtcct 97
Query: 688 tgagaatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatcttggtca 747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 tgagaatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatcttggtca 37
Query: 748 gaaacctaacctttggggcagccatgggatattcct 783
||||||||||||||||||||||||| ||||||||||
Sbjct: 36 gaaacctaacctttggggcagccattggatattcct 1
>gb|CF770095.1|CF770095 DSBF1_5_D10.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_5_D10_A010 3', mRNA sequence
Length = 526
Score = 817 bits (412), Expect = 0.0
Identities = 501/528 (94%), Gaps = 2/528 (0%)
Strand = Plus / Minus
Query: 272 gaagtgacaaatatattagagtaactgcaagttctaccacatatactgattagtcaaagg 331
|||||||||| ||||||| |||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 526 gaagtgacaa-tatattaaagtaacagcaagttctaccacagatactgattagtcaaagg 468
Query: 332 tgcccaaaggtaaagggaaccgaccacaggtgtacaaccaaacaattcagagtggtagtc 391
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 467 tgcccaaaggtaaagggaaccgaccatagttgtacaaccaaacaattcagagtggtagtc 408
Query: 392 atttagagacttcattccatggcaaatatctccagtctatttttatcaagcaaatggcaa 451
||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 407 atttagagacttccttccatggcaaatatctccagtctgtttttatcaagcaaatggcaa 348
Query: 452 cggattaggactgaagtatgatggggttattacaccaagaacagcactgcgctctcatgc 511
||||||||||||||||||| ||| |||||||| ||||||||| || | ||||||||
Sbjct: 347 tagattaggactgaagtatgacggg-ttattacatcaagaacagaaccaggttctcatgc 289
Query: 512 accgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacctcattgga 571
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 accgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacctcattggc 229
Query: 572 tttccagtgctttgcaatgttatcggagagagggtcatctggatttggtgcactcagtag 631
||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||
Sbjct: 228 tttccagtgctttgcaatgttatcggaaagagggtcatctggatttggcgcactcaggag 169
Query: 632 agcctgtatactcaaaagaactgttcgaatctgaagtgctgggctccatttgtccttgag 691
||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||
Sbjct: 168 agcctgtatactcaaaagaaccgtgcgaatctgaagtgccgggctccatttgtccttgag 109
Query: 692 aatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatcttggtcagaaa 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 aatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatcttggtcagaaa 49
Query: 752 cctaacctttggggcagccatgggatattcctcaggtaaaaagagttc 799
||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 48 cctaacctttggggcagccattggatattcctcgggtaaaaagagttc 1
>gb|AW745172.1|AW745172 LG1_386_G05.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 506
Score = 803 bits (405), Expect = 0.0
Identities = 481/505 (95%), Gaps = 1/505 (0%)
Strand = Plus / Minus
Query: 268 acatgaagtgacaaatatattagagtaactgcaagttctaccacatatactgattagtca 327
|||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||
Sbjct: 506 acatgaagtgacaaatatattaaagtaacagcaagttctaccacagatactgattagtca 447
Query: 328 aaggtgcccaaaggtaaagggaaccgaccacaggtgtacaaccaaacaattcagagtggt 387
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 446 aaggtgcccaaaggtaaagggaaccgaccatagttgtacaaccaaacaattcagagtggt 387
Query: 388 agtcatttagagacttcattccatggcaaatatctccagtctatttttatcaagcaaatg 447
||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 386 agtcatttagagacttccttccatggcaaatatctccagtctgtttttatcaagcaaatg 327
Query: 448 gcaacggattaggactgaagtatgatggggttattacaccaagaacagcactgcgctctc 507
|||| ||||||||||||||||||| ||| |||||||| ||||||||| || | ||||
Sbjct: 326 gcaatagattaggactgaagtatgacggg-ttattacatcaagaacagaaccaggttctc 268
Query: 508 atgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacctcat 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 atgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacctcat 208
Query: 568 tggatttccagtgctttgcaatgttatcggagagagggtcatctggatttggtgcactca 627
||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 207 tggctttccagtgctttgcaatgttatcggaaagagggtcatctggatttggcgcactca 148
Query: 628 gtagagcctgtatactcaaaagaactgttcgaatctgaagtgctgggctccatttgtcct 687
| ||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||
Sbjct: 147 ggagagcctgtatactcaaaagaaccgtgcgaatctgaagtgccgggctccatttgtcct 88
Query: 688 tgagaatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatcttggtca 747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 tgagaatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatcttggtca 28
Query: 748 gaaacctaacctttggggcagccat 772
|||||||||||||||||||||||||
Sbjct: 27 gaaacctaacctttggggcagccat 3
>gb|BE362469.1|BE362469 DG1_86_B10.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 500
Score = 803 bits (405), Expect = 0.0
Identities = 478/501 (95%), Gaps = 1/501 (0%)
Strand = Plus / Minus
Query: 439 aagcaaatggcaacggattaggactgaagtatgatggggttattacaccaagaacagcac 498
||||||||||||| ||||| ||||||||||||| ||| |||||||| ||||||||| ||
Sbjct: 500 aagcaaatggcaatagattatgactgaagtatgacggg-ttattacatcaagaacagaac 442
Query: 499 tgcgctctcatgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagctt 558
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caggttctcatgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagctt 382
Query: 559 ctacctcattggatttccagtgctttgcaatgttatcggagagagggtcatctggatttg 618
|||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 381 ctacctcattggctttccagtgctttgcaatgttatcggaaagagggtcatctggatttg 322
Query: 619 gtgcactcagtagagcctgtatactcaaaagaactgttcgaatctgaagtgctgggctcc 678
| |||||||| ||||||||||||||||||||||| || |||||||||||||| |||||||
Sbjct: 321 gcgcactcaggagagcctgtatactcaaaagaaccgtgcgaatctgaagtgccgggctcc 262
Query: 679 atttgtccttgagaatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaa 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atttgtccttgagaatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaa 202
Query: 739 tcttggtcagaaacctaacctttggggcagccatgggatattcctcaggtaaaaagagtt 798
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 201 tcttggtcagaaacctaacctttggggcagccattggatattcctcgggtaaaaagagtt 142
Query: 799 caagcttaaaaactccaccttcatagggcgactgcgccggcccaaggatcataacgttga 858
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 caagcttaaaaactcccccttcatagggcgactgcgccggcccaaggatcataacgttga 82
Query: 859 agtagcgcatgttctcctccgagggcgacgcgctgatccccggcgctggctcgctgagca 918
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 81 agtagcgcatgttctcctccgagggcgacgcgctgatccccggtgctggctcgctgagca 22
Query: 919 gtcgctgcgtctccttgatga 939
| |||||||||||||||||||
Sbjct: 21 gccgctgcgtctccttgatga 1
>gb|BG465889.1|BG465889 RHIZ2_45_H03.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 504
Score = 803 bits (405), Expect = 0.0
Identities = 481/505 (95%), Gaps = 1/505 (0%)
Strand = Plus / Minus
Query: 268 acatgaagtgacaaatatattagagtaactgcaagttctaccacatatactgattagtca 327
|||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||
Sbjct: 504 acatgaagtgacaaatatattaaagtaacagcaagttctaccacagatactgattagtca 445
Query: 328 aaggtgcccaaaggtaaagggaaccgaccacaggtgtacaaccaaacaattcagagtggt 387
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 444 aaggtgcccaaaggtaaagggaaccgaccatagttgtacaaccaaacaattcagagtggt 385
Query: 388 agtcatttagagacttcattccatggcaaatatctccagtctatttttatcaagcaaatg 447
||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 384 agtcatttagagacttccttccatggcaaatatcttcagtctgtttttatcaagcaaatg 325
Query: 448 gcaacggattaggactgaagtatgatggggttattacaccaagaacagcactgcgctctc 507
|||| ||||||||||||||||||| || |||||||| ||||||||| || | | ||||
Sbjct: 324 gcaatagattaggactgaagtatgacagg-ttattacatcaagaacagaaccgggttctc 266
Query: 508 atgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacctcat 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacctcat 206
Query: 568 tggatttccagtgctttgcaatgttatcggagagagggtcatctggatttggtgcactca 627
||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 205 tggctttccagtgctttgcaatgttatcggaaagagggtcatctggatttggcgcactca 146
Query: 628 gtagagcctgtatactcaaaagaactgttcgaatctgaagtgctgggctccatttgtcct 687
| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 145 ggagagcctgtatactcaaaagaaccgttcgaatctgaagtgccgggctccatttgtcct 86
Query: 688 tgagaatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatcttggtca 747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 tgagaatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatcttggtca 26
Query: 748 gaaacctaacctttggggcagccat 772
|||||||||||||||||||||||||
Sbjct: 25 gaaacctaacctttggggcagccat 1
>gb|BG559333.1|BG559333 RHIZ2_53_E07.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 505
Score = 801 bits (404), Expect = 0.0
Identities = 466/484 (96%), Gaps = 2/484 (0%)
Strand = Plus / Minus
Query: 572 tttccagtgctttgcaatgttatcggagagagggtcatctggatttggtgcactcagtag 631
||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||
Sbjct: 501 tttccagtgctttgcaatgttatcggaaagagggtcatctggatttggcgcactcaggag 442
Query: 632 agcctgtatactcaaaagaactgttcgaatctgaagtgctgggctccatttgtccttgag 691
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 441 agcctgtatactcaaaagaaccgttcgaatctgaagtgccgggctccatttgtccttgag 382
Query: 692 aatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatcttggtcagaaa 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatcttggtcagaaa 322
Query: 752 cctaacctttggggcagccatgggatattcctcaggtaaaaagagttcaagcttaaaaac 811
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 cctaacctttggggcagccattggatattcctcgggtaaaaagagttcaagcttaaaaac 262
Query: 812 tccaccttcatagggcgactgcgccggcccaaggatcataacgttgaagtagcgcatgtt 871
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcccccttcatagggcgactgcgccggcccaaggatcataacgttgaagtagcgcatgtt 202
Query: 872 ctcctccgagggcgacgcgctgatccccggcgctggctcgctgagcagtcgctgcgtctc 931
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 201 ctcctccgagggcgacgcgctgatccccggtgctggctcgctgagcagccgctgcgtctc 142
Query: 932 cttgatgatccgccgcgggaggttgctgttggccatcggatcggggcc-gggtgcgggct 990
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 141 cttgatgatccgccgcgggaggttgctgttggccatcggatcggggccggggtgcgggct 82
Query: 991 tcctcctcaacaaagttgcggcgccggtgatgcctcgaggatggcgcggggaaaggagga 1050
|||||||| | ||||||||||||||| ||||||| ||||||||||||||| |||||||
Sbjct: 81 tcctcctcggcgaagttgcggcgccggcgatgccttgaggatggcgcgggg-gaggagga 23
Query: 1051 gcag 1054
||||
Sbjct: 22 gcag 19
>gb|BG465545.1|BG465545 RHIZ2_45_H03.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 454
Score = 720 bits (363), Expect = 0.0
Identities = 419/435 (96%), Gaps = 2/435 (0%)
Strand = Plus / Minus
Query: 621 gcactcagtagagcctgtatactcaaaagaactgttcgaatctgaagtgctgggctccat 680
|||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 452 gcactcaggagagcctgtatactcaaaagaaccgttcgaatctgaagtgccgggctccat 393
Query: 681 ttgtccttgagaatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatc 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 ttgtccttgagaatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatc 333
Query: 741 ttggtcagaaacctaacctttggggcagccatgggatattcctcaggtaaaaagagttca 800
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 332 ttggtcagaaacctaacctttggggcagccattggatattcctcgggtaaaaagagttca 273
Query: 801 agcttaaaaactccaccttcatagggcgactgcgccggcccaaggatcataacgttgaag 860
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 agcttaaaaactcccccttcatagggcgactgcgccggcccaaggatcataacgttgaag 213
Query: 861 tagcgcatgttctcctccgagggcgacgcgctgatccccggcgctggctcgctgagcagt 920
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 212 tagcgcatgttctcctccgagggcgacgcgctgatccccggtgctggctcgctgagcagc 153
Query: 921 cgctgcgtctccttgatgatccgccgcgggaggttgctgttggccatcggatcggggcc- 979
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 cgctgcgtctccttgatgatccgccgcgggaggttgctgttggccatcggatcggggccg 93
Query: 980 gggtgcgggcttcctcctcaacaaagttgcggcgccggtgatgcctcgaggatggcgcgg 1039
||||||||||||||||||| | ||||||||||||||| ||||||| |||||||||||||
Sbjct: 92 gggtgcgggcttcctcctcggcgaagttgcggcgccggcgatgccttgaggatggcgcgg 33
Query: 1040 ggaaaggaggagcag 1054
|| |||||||||||
Sbjct: 32 gg-gaggaggagcag 19
>gb|BG559341.1|BG559341 RHIZ2_53_F03.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 448
Score = 704 bits (355), Expect = 0.0
Identities = 414/431 (96%), Gaps = 2/431 (0%)
Strand = Plus / Minus
Query: 625 tcagtagagcctgtatactcaaaagaactgttcgaatctgaagtgctgggctccatttgt 684
|||| ||||||||||||||||||||| | ||||||||||||||||| |||||||||||||
Sbjct: 448 tcaggagagcctgtatactcaaaagacccgttcgaatctgaagtgccgggctccatttgt 389
Query: 685 ccttgagaatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatcttgg 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ccttgagaatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatcttgg 329
Query: 745 tcagaaacctaacctttggggcagccatgggatattcctcaggtaaaaagagttcaagct 804
|||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 328 tcagaaacctaacctttggggcagccattggatattcctcgggtaaaaagagttcaagct 269
Query: 805 taaaaactccaccttcatagggcgactgcgccggcccaaggatcataacgttgaagtagc 864
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 taaaaactcccccttcatagggcgactgcgccggcccaaggatcataacgttgaagtagc 209
Query: 865 gcatgttctcctccgagggcgacgcgctgatccccggcgctggctcgctgagcagtcgct 924
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 208 gcatgttctcctccgagggcgacgcgctgatccccggtgctggctcgctgagcagccgct 149
Query: 925 gcgtctccttgatgatccgccgcgggaggttgctgttggccatcggatcggggcc-gggt 983
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 148 gcgtctccttgatgatccgccgcgggaggttgctgttggccatcggatcggggccggggt 89
Query: 984 gcgggcttcctcctcaacaaagttgcggcgccggtgatgcctcgaggatggcgcggggaa 1043
||||||||||||||| | ||||||||||||||| ||||||| |||||||||||||||
Sbjct: 88 gcgggcttcctcctcggcgaagttgcggcgccggcgatgccttgaggatggcgcgggg-g 30
Query: 1044 aggaggagcag 1054
|||||||||||
Sbjct: 29 aggaggagcag 19
>gb|BE352961.1|BE352961 DG1_1_D02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 449
Score = 694 bits (350), Expect = 0.0
Identities = 426/450 (94%), Gaps = 1/450 (0%)
Strand = Plus / Minus
Query: 268 acatgaagtgacaaatatattagagtaactgcaagttctaccacatatactgattagtca 327
|||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||
Sbjct: 449 acatgaagtgacaaatatattaaagtaacagcaagttctaccacagatactgattagtca 390
Query: 328 aaggtgcccaaaggtaaagggaaccgaccacaggtgtacaaccaaacaattcagagtggt 387
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 389 aaggtgcccaaaggtaaagggaaccgaccatagttgtacaaccaaacaattcagagtggt 330
Query: 388 agtcatttagagacttcattccatggcaaatatctccagtctatttttatcaagcaaatg 447
||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 329 agtcatttagagacttccttccatggcaaatatctccagtctgtttttatcaagcaaatg 270
Query: 448 gcaacggattaggactgaagtatgatggggttattacaccaagaacagcactgcgctctc 507
|||| ||||||||||||||||||| ||| |||||||| ||||||||| || | ||||
Sbjct: 269 gcaatagattaggactgaagtatgacggg-ttattacatcaagaacagaaccaggttctc 211
Query: 508 atgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacctcat 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 atgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagcttctacctcat 151
Query: 568 tggatttccagtgctttgcaatgttatcggagagagggtcatctggatttggtgcactca 627
||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 150 tggctttccagtgctttgcaatgttatcggaaagagggtcatctggatttggcgcactca 91
Query: 628 gtagagcctgtatactcaaaagaactgttcgaatctgaagtgctgggctccatttgtcct 687
| ||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||
Sbjct: 90 ggagagcctgtatactcaaaagaaccgtgcgaatctgaagtgccgggctccatttgtcct 31
Query: 688 tgagaatgtcgaggcatatcctaccaagct 717
||||||||||||||||||||||||||||||
Sbjct: 30 tgagaatgtcgaggcatatcctaccaagct 1
>gb|BG241710.1|BG241710 RHIZ2_49_H05.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 420
Score = 670 bits (338), Expect = 0.0
Identities = 388/402 (96%), Gaps = 2/402 (0%)
Strand = Plus / Minus
Query: 654 gttcgaatctgaagtgctgggctccatttgtccttgagaatgtcgaggcatatcctacca 713
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gttcgaatctgaagtgccgggctccatttgtccttgagaatgtcgaggcatatcctacca 360
Query: 714 agcttgtcaatgttgggatgataaatcttggtcagaaacctaacctttggggcagccatg 773
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 agcttgtcaatgttgggatgataaatcttggtcagaaacctaacctttggggcagccatt 300
Query: 774 ggatattcctcaggtaaaaagagttcaagcttaaaaactccaccttcatagggcgactgc 833
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 299 ggatattcctcgggtaaaaagagttcaagcttaaaaactcccccttcatagggcgactgc 240
Query: 834 gccggcccaaggatcataacgttgaagtagcgcatgttctcctccgagggcgacgcgctg 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 gccggcccaaggatcataacgttgaagtagcgcatgttctcctccgagggcgacgcgctg 180
Query: 894 atccccggcgctggctcgctgagcagtcgctgcgtctccttgatgatccgccgcgggagg 953
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 179 atccccggtgctggctcgctgagcagccgctgcgtctccttgatgatccgccgcgggagg 120
Query: 954 ttgctgttggccatcggatcggggcc-gggtgcgggcttcctcctcaacaaagttgcggc 1012
|||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||
Sbjct: 119 ttgctgttggccatcggatcggggccggggtgcgggcttcctcctcggcgaagttgcggc 60
Query: 1013 gccggtgatgcctcgaggatggcgcggggaaaggaggagcag 1054
||||| ||||||| ||||||||||||||| |||||||||||
Sbjct: 59 gccggcgatgccttgaggatggcgcgggg-gaggaggagcag 19
>gb|CF761219.1|CF761219 DSAF1_72_E10.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_72_E10_A011 5', mRNA sequence
Length = 422
Score = 664 bits (335), Expect = 0.0
Identities = 402/423 (95%), Gaps = 1/423 (0%)
Strand = Plus / Minus
Query: 377 ttcagagtggtagtcatttagagacttcattccatggcaaatatctccagtctattttta 436
|||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct: 422 ttcagagtggtagtcatttagagacttccttccatggcaaatatctccagtctgttttta 363
Query: 437 tcaagcaaatggcaacggattaggactgaagtatgatggggttattacaccaagaacagc 496
||||||||||||||| ||||||||||||||||||| ||| |||||||| |||||||||
Sbjct: 362 tcaagcaaatggcaatagattaggactgaagtatgacggg-ttattacatcaagaacaga 304
Query: 497 actgcgctctcatgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagc 556
|| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 accaggttctcatgcaccgctcgcatacaggcgagtccactccttggctgtttcaacagc 244
Query: 557 ttctacctcattggatttccagtgctttgcaatgttatcggagagagggtcatctggatt 616
|||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 243 ttctacctcattggctttccagtgctttgcaatgttatcggaaagagggtcatctggatt 184
Query: 617 tggtgcactcagtagagcctgtatactcaaaagaactgttcgaatctgaagtgctgggct 676
||| |||||||| ||||||||||||||||||||||| || |||||||||||||| |||||
Sbjct: 183 tggcgcactcaggagagcctgtatactcaaaagaaccgtgcgaatctgaagtgccgggct 124
Query: 677 ccatttgtccttgagaatgtcgaggcatatcctaccaagcttgtcaatgttgggatgata 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ccatttgtccttgagaatgtcgaggcatatcctaccaagcttgtcaatgttgggatgata 64
Query: 737 aatcttggtcagaaacctaacctttggggcagccatgggatattcctcaggtaaaaagag 796
|||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 63 aatcttggtcagaaacctaacctttggggcagccattggatattcctcgggtaaaaagag 4
Query: 797 ttc 799
|||
Sbjct: 3 ttc 1
>gb|CW105794.1|CW105794 104_475_11013068_116_34457_078 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11013068, DNA
sequence
Length = 622
Score = 498 bits (251), Expect = e-139
Identities = 327/351 (93%), Gaps = 1/351 (0%)
Strand = Plus / Minus
Query: 196 aaggtacagcgaaaatgcaaccaagctaaccagcctcagttccaacattatgaacagttg 255
|||||||| | ||| |||||||||||||||||||||||||| ||||| |||| |||||||
Sbjct: 388 aaggtacaacaaaagtgcaaccaagctaaccagcctcagtttcaacactatggacagttg 329
Query: 256 agaagctcttctacatgaagtgacaaatatattagagtaactgcaagttctaccacatat 315
|||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||
Sbjct: 328 agaaactcttctacatgaagtgacaaatatattaaagtaacagcaagttctaccacagat 269
Query: 316 actgattagtcaaaggtgcccaaaggtaaagggaaccgaccacaggtgtacaaccaaaca 375
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 268 actgattagtcaaaggtgcccaaaggtaaagggaaccgaccatagttgtacaaccaaaca 209
Query: 376 attcagagtggtagtcatttagagacttcattccatggcaaatatctccagtctattttt 435
||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct: 208 attcagagtggtagtcatttagagacttccttccatggcaaatatctccagtctgttttt 149
Query: 436 atcaagcaaatggcaacggattaggactgaagtatgatggggttattacaccaagaacag 495
|||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 148 atcaagcaaatggcaatagattaggactgaagtatga-cgggttattacatcaagaacag 90
Query: 496 cactgcgctctcatgcaccgctcgcatacaggcgagtccactccttggctg 546
|| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 aaccaggttctcatgcaccgctcgcatacaggcgagtccactccttggctg 39
>gb|AW286703.2|AW286703 LG1_204_C06.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 322
Score = 470 bits (237), Expect = e-130
Identities = 293/310 (94%), Gaps = 5/310 (1%)
Strand = Plus / Minus
Query: 765 gcagccatgggatattcctcaggtaaaaagagttcaagcttaaaaactccaccttcatag 824
|||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 322 gcagccattggatattcctcgggtaaaaagagttcaagcttaaaaactcccccttcatag 263
Query: 825 ggcgactgcgccggcccaaggatcataacgttgaagtagcgcatgttctcctccgagggc 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ggcgactgcgccggcccaaggatcataacgttgaagtagcgcatgttctcctccgagggc 203
Query: 885 gacgcgctgatccccggcgctggctcgctgagcagtcgctgcgtctccttgatgatccgc 944
||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 202 gacgcgctgatccccggtgctggctcgctgagcagccgctgcgtctccttgatgatccgc 143
Query: 945 cgcgggaggttgctgttggccatcggatcggggcc-gggtgcgggcttcctcctcaacaa 1003
||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |
Sbjct: 142 cgcgggaggttgctgttggccatcggatcggggccggggtgcgggcttcctcctcggcga 83
Query: 1004 agttgcggcgccggtgatgcctcgaggatggcgcggggaaaggaggagcagcagccggtc 1063
|||||||||||||| ||||||| |||||||||||||| ||||||| ||||| |||||
Sbjct: 82 agttgcggcgccggcgatgccttgaggatggcgcggg----ggaggaggagcagtcggtc 27
Query: 1064 ggggtgggga 1073
||||||||||
Sbjct: 26 ggggtgggga 17
>gb|CD427858.1|CD427858 ETH1_34_G01.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_34_G01_A002 5', mRNA sequence
Length = 328
Score = 392 bits (198), Expect = e-107
Identities = 245/259 (94%), Gaps = 5/259 (1%)
Strand = Plus / Minus
Query: 816 ccttcatagggcgactgcgccggcccaaggatcataacgttgaagtagcgcatgttctcc 875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ccttcatagggcgactgcgccggcccaaggatcataacgttgaagtagcgcatgttctcc 265
Query: 876 tccgagggcgacgcgctgatccccggcgctggctcgctgagcagtcgctgcgtctccttg 935
|||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 264 tccgagggcgacgcgctgatccccggtgctggctcgctgagcagccgctgcgtctccttg 205
Query: 936 atgatccgccgcgggaggttgctgttggccatcggatcggggcc-gggtgcgggcttcct 994
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 204 atgatccgccgcgggaggttgctgttggccatcggatcggggccggggtgcgggcttcct 145
Query: 995 cctcaacaaagttgcggcgccggtgatgcctcgaggatggcgcggggaaaggaggagcag 1054
|||| | ||||||||||||||| ||||||| |||||||||||||| ||||||| ||
Sbjct: 144 cctcggcgaagttgcggcgccggcgatgccttgaggatggcgcggg----ggaggaggag 89
Query: 1055 cagccggtcggggtgggga 1073
||| |||||||||||||||
Sbjct: 88 cagtcggtcggggtgggga 70
>gb|AW923932.1|AW923932 WS1_31_G12.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 600
Score = 280 bits (141), Expect = 3e-073
Identities = 363/437 (83%)
Strand = Plus / Minus
Query: 531 gtccactccttggctgtttcaacagcttctacctcattggatttccagtgctttgcaatg 590
|||||||| || |||||||| |||||||| | ||||| | |||||||||||||| |
Sbjct: 551 gtccactctttagctgtttctacagcttcagcttcattagccttccagtgctttgccaca 492
Query: 591 ttatcggagagagggtcatctggatttggtgcactcagtagagcctgtatactcaaaaga 650
|| |||| || |||||||| || ||||| ||||| || | ||||| || ||||| | |
Sbjct: 491 ttgtcggcaagtgggtcatcagggtttggagcactaagcaatgcctggatgctcaataaa 432
Query: 651 actgttcgaatctgaagtgctgggctccatttgtccttgagaatgtcgaggcatatccta 710
||||||||||||||||| || || ||||| |||||||| | ||| || ||||||||||||
Sbjct: 431 actgttcgaatctgaagggcaggactccacttgtccttcaaaatatcaaggcatatccta 372
Query: 711 ccaagcttgtcaatgttgggatgataaatcttggtcagaaacctaacctttggggcagcc 770
||||||||||||||||| || |||||||| || || ||||| | ||||||||| | ||||
Sbjct: 371 ccaagcttgtcaatgttagggtgataaatttttgtgagaaaacgaacctttggtggagcc 312
Query: 771 atgggatattcctcaggtaaaaagagttcaagcttaaaaactccaccttcatagggcgac 830
|| |||||||| ||||| || || | || ||||| |||||||| || || || ||||||
Sbjct: 311 attggatattcttcaggcaagaataactcgagcttgaaaactcctccctcgtatggcgac 252
Query: 831 tgcgccggcccaaggatcataacgttgaagtagcgcatgttctcctccgagggcgacgcg 890
|||| || ||||||||||| || ||||||||||||||||||||||| || ||||| ||
Sbjct: 251 tgcgatggtccaaggatcatgacattgaagtagcgcatgttctcctctgatggcgaggca 192
Query: 891 ctgatccccggcgctggctcgctgagcagtcgctgcgtctccttgatgatccgccgcggg 950
||||| || || |||||||||||||||| |||||||||||||||||||| || || |||
Sbjct: 191 ctgattcctggagctggctcgctgagcaaccgctgcgtctccttgatgatgcggcggggg 132
Query: 951 aggttgctgttggccat 967
|||||||||||||||||
Sbjct: 131 aggttgctgttggccat 115
>gb|CD430066.1|CD430066 ETH1_13_H06.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_13_H06_A002 5', mRNA sequence
Length = 644
Score = 280 bits (141), Expect = 3e-073
Identities = 363/437 (83%)
Strand = Plus / Minus
Query: 531 gtccactccttggctgtttcaacagcttctacctcattggatttccagtgctttgcaatg 590
|||||||| || |||||||| |||||||| | ||||| | |||||||||||||| |
Sbjct: 571 gtccactctttagctgtttctacagcttcagcttcattagccttccagtgctttgccaca 512
Query: 591 ttatcggagagagggtcatctggatttggtgcactcagtagagcctgtatactcaaaaga 650
|| |||| || |||||||| || ||||| ||||| || | ||||| || ||||| | |
Sbjct: 511 ttgtcggcaagtgggtcatcagggtttggagcactaagcaatgcctggatgctcaataaa 452
Query: 651 actgttcgaatctgaagtgctgggctccatttgtccttgagaatgtcgaggcatatccta 710
||||||||||||||||| || || ||||| |||||||| | ||| || ||||||||||||
Sbjct: 451 actgttcgaatctgaagggcaggactccacttgtccttcaaaatatcaaggcatatccta 392
Query: 711 ccaagcttgtcaatgttgggatgataaatcttggtcagaaacctaacctttggggcagcc 770
||||||||||||||||| || |||||||| || || ||||| | ||||||||| | ||||
Sbjct: 391 ccaagcttgtcaatgttagggtgataaatttttgtgagaaaacgaacctttggtggagcc 332
Query: 771 atgggatattcctcaggtaaaaagagttcaagcttaaaaactccaccttcatagggcgac 830
|| |||||||| ||||| || || | || ||||| |||||||| || || || ||||||
Sbjct: 331 attggatattcttcaggcaagaataactcgagcttgaaaactcctccctcgtatggcgac 272
Query: 831 tgcgccggcccaaggatcataacgttgaagtagcgcatgttctcctccgagggcgacgcg 890
|||| || ||||||||||| || ||||||||||||||||||||||| || ||||| ||
Sbjct: 271 tgcgatggtccaaggatcatgacattgaagtagcgcatgttctcctctgatggcgaggca 212
Query: 891 ctgatccccggcgctggctcgctgagcagtcgctgcgtctccttgatgatccgccgcggg 950
||||| || || |||||||||||||||| |||||||||||||||||||| || || |||
Sbjct: 211 ctgattcctggagctggctcgctgagcaaccgctgcgtctccttgatgatgcggcggggg 152
Query: 951 aggttgctgttggccat 967
|||||||||||||||||
Sbjct: 151 aggttgctgttggccat 135
>gb|CN139896.1|CN139896 OX1_24_G04.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_24_G04_A002 5', mRNA sequence
Length = 794
Score = 280 bits (141), Expect = 3e-073
Identities = 363/437 (83%)
Strand = Plus / Minus
Query: 531 gtccactccttggctgtttcaacagcttctacctcattggatttccagtgctttgcaatg 590
|||||||| || |||||||| |||||||| | ||||| | |||||||||||||| |
Sbjct: 569 gtccactctttagctgtttctacagcttcagcttcattagccttccagtgctttgccaca 510
Query: 591 ttatcggagagagggtcatctggatttggtgcactcagtagagcctgtatactcaaaaga 650
|| |||| || |||||||| || ||||| ||||| || | ||||| || ||||| | |
Sbjct: 509 ttgtcggcaagtgggtcatcagggtttggagcactaagcaatgcctggatgctcaataaa 450
Query: 651 actgttcgaatctgaagtgctgggctccatttgtccttgagaatgtcgaggcatatccta 710
||||||||||||||||| || || ||||| |||||||| | ||| || ||||||||||||
Sbjct: 449 actgttcgaatctgaagggcaggactccacttgtccttcaaaatatcaaggcatatccta 390
Query: 711 ccaagcttgtcaatgttgggatgataaatcttggtcagaaacctaacctttggggcagcc 770
||||||||||||||||| || |||||||| || || ||||| | ||||||||| | ||||
Sbjct: 389 ccaagcttgtcaatgttagggtgataaatttttgtgagaaaacgaacctttggtggagcc 330
Query: 771 atgggatattcctcaggtaaaaagagttcaagcttaaaaactccaccttcatagggcgac 830
|| |||||||| ||||| || || | || ||||| |||||||| || || || ||||||
Sbjct: 329 attggatattcttcaggcaagaataactcgagcttgaaaactcctccctcgtatggcgac 270
Query: 831 tgcgccggcccaaggatcataacgttgaagtagcgcatgttctcctccgagggcgacgcg 890
|||| || ||||||||||| || ||||||||||||||||||||||| || ||||| ||
Sbjct: 269 tgcgatggtccaaggatcatgacattgaagtagcgcatgttctcctctgatggcgaggca 210
Query: 891 ctgatccccggcgctggctcgctgagcagtcgctgcgtctccttgatgatccgccgcggg 950
||||| || || |||||||||||||||| |||||||||||||||||||| || || |||
Sbjct: 209 ctgattcctggagctggctcgctgagcaaccgctgcgtctccttgatgatgcggcggggg 150
Query: 951 aggttgctgttggccat 967
|||||||||||||||||
Sbjct: 149 aggttgctgttggccat 133
>gb|BG559265.1|BG559265 RHIZ2_52_F09.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 553
Score = 268 bits (135), Expect = 1e-069
Identities = 330/395 (83%)
Strand = Plus / Minus
Query: 573 ttccagtgctttgcaatgttatcggagagagggtcatctggatttggtgcactcagtaga 632
|||||||||||||| | || |||| || |||||||| || ||||| ||||| || |
Sbjct: 526 ttccagtgctttgccacattgtcggcaagtgggtcatcagggtttggagcactaagcaat 467
Query: 633 gcctgtatactcaaaagaactgttcgaatctgaagtgctgggctccatttgtccttgaga 692
||||| || ||||| | |||||||||||||||||| || || ||||| |||||||| | |
Sbjct: 466 gcctggatgctcaataaaactgttcgaatctgaagggcaggactccacttgtccttcaaa 407
Query: 693 atgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatcttggtcagaaac 752
|| || ||||||||||||||||||||||||||||| || |||||||| || || |||||
Sbjct: 406 atatcaaggcatatcctaccaagcttgtcaatgttagggtgataaatttttgtgagaaaa 347
Query: 753 ctaacctttggggcagccatgggatattcctcaggtaaaaagagttcaagcttaaaaact 812
| ||||||||| | |||||| |||||||| ||||| || || | || ||||| ||||||
Sbjct: 346 cgaacctttggtggagccattggatattcttcaggcaagaataactcgagcttgaaaact 287
Query: 813 ccaccttcatagggcgactgcgccggcccaaggatcataacgttgaagtagcgcatgttc 872
|| || || || |||||||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 286 cctccctcgtatggcgactgcgatggtccaaggatcatgacattgaagtagcgcatgttc 227
Query: 873 tcctccgagggcgacgcgctgatccccggcgctggctcgctgagcagtcgctgcgtctcc 932
||||| || ||||| || ||||| || || |||||||||||||||| ||||||||||||
Sbjct: 226 tcctctgatggcgaggcactgattcctggagctggctcgctgagcaaccgctgcgtctcc 167
Query: 933 ttgatgatccgccgcgggaggttgctgttggccat 967
|||||||| || || ||||||||||||||||||||
Sbjct: 166 ttgatgatgcggcgggggaggttgctgttggccat 132
>gb|CD211812.1|CD211812 HS1_64_D06.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_64_D06_A012 5', mRNA sequence
Length = 555
Score = 268 bits (135), Expect = 1e-069
Identities = 330/395 (83%)
Strand = Plus / Minus
Query: 573 ttccagtgctttgcaatgttatcggagagagggtcatctggatttggtgcactcagtaga 632
|||||||||||||| | || |||| || |||||||| || ||||| ||||| || |
Sbjct: 545 ttccagtgctttgccacattgtcggcaagtgggtcatcagggtttggagcactaagcaat 486
Query: 633 gcctgtatactcaaaagaactgttcgaatctgaagtgctgggctccatttgtccttgaga 692
||||| || ||||| | |||||||||||||||||| || || ||||| |||||||| | |
Sbjct: 485 gcctggatgctcaataaaactgttcgaatctgaagggcaggactccacttgtccttcaaa 426
Query: 693 atgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatcttggtcagaaac 752
|| || ||||||||||||||||||||||||||||| || |||||||| || || |||||
Sbjct: 425 atatcaaggcatatcctaccaagcttgtcaatgttagggtgataaatttttgtgagaaaa 366
Query: 753 ctaacctttggggcagccatgggatattcctcaggtaaaaagagttcaagcttaaaaact 812
| ||||||||| | |||||| |||||||| ||||| || || | || ||||| ||||||
Sbjct: 365 cgaacctttggtggagccattggatattcttcaggcaagaataactcgagcttgaaaact 306
Query: 813 ccaccttcatagggcgactgcgccggcccaaggatcataacgttgaagtagcgcatgttc 872
|| || || || |||||||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 305 cctccctcgtatggcgactgcgatggtccaaggatcatgacattgaagtagcgcatgttc 246
Query: 873 tcctccgagggcgacgcgctgatccccggcgctggctcgctgagcagtcgctgcgtctcc 932
||||| || ||||| || ||||| || || |||||||||||||||| ||||||||||||
Sbjct: 245 tcctctgatggcgaggcactgattcctggagctggctcgctgagcaaccgctgcgtctcc 186
Query: 933 ttgatgatccgccgcgggaggttgctgttggccat 967
|||||||| || || ||||||||||||||||||||
Sbjct: 185 ttgatgatgcggcgggggaggttgctgttggccat 151
>gb|AW745521.1|AW745521 WS1_35_A05.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 549
Score = 264 bits (133), Expect = 2e-068
Identities = 307/365 (84%)
Strand = Plus / Minus
Query: 603 gggtcatctggatttggtgcactcagtagagcctgtatactcaaaagaactgttcgaatc 662
|||||||| || ||||| ||||| || | ||||| || ||||| | |||||||||||||
Sbjct: 492 gggtcatcagggtttggagcactaagcaatgcctggatgctcaataaaactgttcgaatc 433
Query: 663 tgaagtgctgggctccatttgtccttgagaatgtcgaggcatatcctaccaagcttgtca 722
||||| || || ||||| |||||||| | ||| || ||||||||||||||||||||||||
Sbjct: 432 tgaagggcaggactccacttgtccttcaaaatatcaaggcatatcctaccaagcttgtca 373
Query: 723 atgttgggatgataaatcttggtcagaaacctaacctttggggcagccatgggatattcc 782
||||| || |||||||| || || ||||| | ||||||||| | |||||| ||||||||
Sbjct: 372 atgttagggtgataaatttttgtgagaaaacgaacctttggtggagccattggatattct 313
Query: 783 tcaggtaaaaagagttcaagcttaaaaactccaccttcatagggcgactgcgccggccca 842
||||| || || | || ||||| |||||||| || || || |||||||||| || |||
Sbjct: 312 tcaggcaagaataactcgagcttgaaaactcctccctcgtatggcgactgcgatggtcca 253
Query: 843 aggatcataacgttgaagtagcgcatgttctcctccgagggcgacgcgctgatccccggc 902
|||||||| || ||||||||||||||||||||||| || ||||| || ||||| || ||
Sbjct: 252 aggatcatgacattgaagtagcgcatgttctcctctgatggcgaggcactgattcctgga 193
Query: 903 gctggctcgctgagcagtcgctgcgtctccttgatgatccgccgcgggaggttgctgttg 962
|||||||||||||||| |||||||||||||||||||| || || |||||||||||||||
Sbjct: 192 gctggctcgctgagcaaccgctgcgtctccttgatgatgcggcgggggaggttgctgttg 133
Query: 963 gccat 967
|||||
Sbjct: 132 gccat 128
>gb|BG463946.1|BG463946 EM1_52_G07.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 517
Score = 264 bits (133), Expect = 2e-068
Identities = 307/365 (84%)
Strand = Plus / Minus
Query: 603 gggtcatctggatttggtgcactcagtagagcctgtatactcaaaagaactgttcgaatc 662
|||||||| || ||||| ||||| || | ||||| || ||||| | |||||||||||||
Sbjct: 499 gggtcatcagggtttggagcactaagcaatgcctggatgctcaataaaactgttcgaatc 440
Query: 663 tgaagtgctgggctccatttgtccttgagaatgtcgaggcatatcctaccaagcttgtca 722
||||| || || ||||| |||||||| | ||| || ||||||||||||||||||||||||
Sbjct: 439 tgaagggcaggactccacttgtccttcaaaatatcaaggcatatcctaccaagcttgtca 380
Query: 723 atgttgggatgataaatcttggtcagaaacctaacctttggggcagccatgggatattcc 782
||||| || |||||||| || || ||||| | ||||||||| | |||||| ||||||||
Sbjct: 379 atgttagggtgataaatttttgtgagaaaacgaacctttggtggagccattggatattct 320
Query: 783 tcaggtaaaaagagttcaagcttaaaaactccaccttcatagggcgactgcgccggccca 842
||||| || || | || ||||| |||||||| || || || |||||||||| || |||
Sbjct: 319 tcaggcaagaataactcgagcttgaaaactcctccctcgtatggcgactgcgatggtcca 260
Query: 843 aggatcataacgttgaagtagcgcatgttctcctccgagggcgacgcgctgatccccggc 902
|||||||| || ||||||||||||||||||||||| || ||||| || ||||| || ||
Sbjct: 259 aggatcatgacattgaagtagcgcatgttctcctctgatggcgaggcactgattcctgga 200
Query: 903 gctggctcgctgagcagtcgctgcgtctccttgatgatccgccgcgggaggttgctgttg 962
|||||||||||||||| |||||||||||||||||||| || || |||||||||||||||
Sbjct: 199 gctggctcgctgagcaaccgctgcgtctccttgatgatgcggcgggggaggttgctgttg 140
Query: 963 gccat 967
|||||
Sbjct: 139 gccat 135
>gb|CD222706.1|CD222706 CCC1_23_D07.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_23_D07_A007 5', mRNA sequence
Length = 667
Score = 250 bits (126), Expect = 2e-064
Identities = 339/410 (82%)
Strand = Plus / Minus
Query: 531 gtccactccttggctgtttcaacagcttctacctcattggatttccagtgctttgcaatg 590
|||||||| || |||||||| |||||||| | ||||| | |||||||||||||| |
Sbjct: 458 gtccactctttagctgtttctacagcttcagcttcattagccttccagtgctttgccaca 399
Query: 591 ttatcggagagagggtcatctggatttggtgcactcagtagagcctgtatactcaaaaga 650
|| |||| || |||||||| || ||||| ||||| || | ||||| || ||||| | |
Sbjct: 398 ttgtcggcaagtgggtcatcagggtttggagcactaagcaatgcctggatgctcaataaa 339
Query: 651 actgttcgaatctgaagtgctgggctccatttgtccttgagaatgtcgaggcatatccta 710
||||||||||||||||| || || ||||| |||||||| | ||| || ||||||||||||
Sbjct: 338 actgttcgaatctgaagggcaggactccacttgtccttcaaaatatcaaggcatatccta 279
Query: 711 ccaagcttgtcaatgttgggatgataaatcttggtcagaaacctaacctttggggcagcc 770
||||||||||||||||| || |||||||| || || ||||| | ||||||||| | ||||
Sbjct: 278 ccaagcttgtcaatgttagggtgataaatttttgtgagaaaacgaacctttggtggagcc 219
Query: 771 atgggatattcctcaggtaaaaagagttcaagcttaaaaactccaccttcatagggcgac 830
|| |||||||| ||||| || || | || ||||| |||||||| || || || ||||||
Sbjct: 218 attggatattcttcaggcaagaataactcgagcttgaaaactcctccctcgtatggcgac 159
Query: 831 tgcgccggcccaaggatcataacgttgaagtagcgcatgttctcctccgagggcgacgcg 890
|||| || ||||||||||| || ||||||||||||||||||||||| || ||||| ||
Sbjct: 158 tgcgatggtccaaggatcatgacattgaagtagcgcatgttctcctctgatggcgaggca 99
Query: 891 ctgatccccggcgctggctcgctgagcagtcgctgcgtctccttgatgat 940
||||| || || |||||||||||||||| ||||||||||||||||||||
Sbjct: 98 ctgattcctggagctggctcgctgagcaaccgctgcgtctccttgatgat 49
>gb|CN139818.1|CN139818 OX1_24_G04.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_24_G04_A002 3', mRNA sequence
Length = 710
Score = 236 bits (119), Expect = 4e-060
Identities = 332/403 (82%)
Strand = Plus / Minus
Query: 531 gtccactccttggctgtttcaacagcttctacctcattggatttccagtgctttgcaatg 590
|||||||| || |||||||| |||||||| | ||||| | |||||||||||||| |
Sbjct: 403 gtccactctttagctgtttctacagcttcagcttcattagccttccagtgctttgccaca 344
Query: 591 ttatcggagagagggtcatctggatttggtgcactcagtagagcctgtatactcaaaaga 650
|| |||| || |||||||| || ||||| ||||| || | ||||| || ||||| | |
Sbjct: 343 ttgtcggcaagtgggtcatcagggtttggagcactaagcaatgcctggatgctcaataaa 284
Query: 651 actgttcgaatctgaagtgctgggctccatttgtccttgagaatgtcgaggcatatccta 710
||||||||||||||||| || || ||||| |||||||| | ||| || ||||||||||||
Sbjct: 283 actgttcgaatctgaagggcaggactccacttgtccttcaaaatatcaaggcatatccta 224
Query: 711 ccaagcttgtcaatgttgggatgataaatcttggtcagaaacctaacctttggggcagcc 770
||||||||||||||||| || |||||||| || || ||||| | ||||||||| | ||||
Sbjct: 223 ccaagcttgtcaatgttagggtgataaatttttgtgagaaaacgaacctttggtggagcc 164
Query: 771 atgggatattcctcaggtaaaaagagttcaagcttaaaaactccaccttcatagggcgac 830
|| |||||||| ||||| || || | || ||||| |||||||| || || || ||||||
Sbjct: 163 attggatattcttcaggcaagaataactcgagcttgaaaactcctccctcgtatggcgac 104
Query: 831 tgcgccggcccaaggatcataacgttgaagtagcgcatgttctcctccgagggcgacgcg 890
|||| || ||||||||||| || ||||||||||||||||||||||| || ||||| ||
Sbjct: 103 tgcgatggtccaaggatcatgacattgaagtagcgcatgttctcctctgatggcgaggca 44
Query: 891 ctgatccccggcgctggctcgctgagcagtcgctgcgtctcct 933
||||| || || |||||||||||||||| |||||||||||||
Sbjct: 43 ctgattcctggagctggctcgctgagcaaccgctgcgtctcct 1
>gb|CW146670.1|CW146670 104_539_11139114_148_34987_069 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11139114, DNA
sequence
Length = 574
Score = 230 bits (116), Expect = 2e-058
Identities = 146/156 (93%)
Strand = Plus / Minus
Query: 196 aaggtacagcgaaaatgcaaccaagctaaccagcctcagttccaacattatgaacagttg 255
|||||||| | ||| |||||||||||||||||||||||||| ||||| |||| |||||||
Sbjct: 160 aaggtacaacaaaagtgcaaccaagctaaccagcctcagtttcaacactatggacagttg 101
Query: 256 agaagctcttctacatgaagtgacaaatatattagagtaactgcaagttctaccacatat 315
|||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||
Sbjct: 100 agaaactcttctacatgaagtgacaaatatattaaagtaacagcaagttctaccacagat 41
Query: 316 actgattagtcaaaggtgcccaaaggtaaagggaac 351
||||||||||||||||||||||||||||||||||||
Sbjct: 40 actgattagtcaaaggtgcccaaaggtaaagggaac 5
>gb|BG158055.1|BG158055 EM1_7_H04.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 424
Score = 228 bits (115), Expect = 9e-058
Identities = 244/287 (85%)
Strand = Plus / Minus
Query: 681 ttgtccttgagaatgtcgaggcatatcctaccaagcttgtcaatgttgggatgataaatc 740
|||||||| | ||| || ||||||||||||||||||||||||||||| || ||||||||
Sbjct: 421 ttgtccttcaaaatatcaaggcatatcctaccaagcttgtcaatgttagggtgataaatt 362
Query: 741 ttggtcagaaacctaacctttggggcagccatgggatattcctcaggtaaaaagagttca 800
|| || ||||| | ||||||||| | |||||| |||||||| ||||| || || | ||
Sbjct: 361 tttgtgagaaaacgaacctttggtggagccattggatattcttcaggcaagaataactcg 302
Query: 801 agcttaaaaactccaccttcatagggcgactgcgccggcccaaggatcataacgttgaag 860
||||| |||||||| || || || |||||||||| || ||||||||||| || ||||||
Sbjct: 301 agcttgaaaactcctccctcgtatggcgactgcgatggtccaaggatcatgacattgaag 242
Query: 861 tagcgcatgttctcctccgagggcgacgcgctgatccccggcgctggctcgctgagcagt 920
||||||||||||||||| || ||||| || ||||| || || ||||||||||||||||
Sbjct: 241 tagcgcatgttctcctctgatggcgaggcactgattcctggagctggctcgctgagcaac 182
Query: 921 cgctgcgtctccttgatgatccgccgcgggaggttgctgttggccat 967
|||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 181 cgctgcgtctccttgatgatgcggcgggggaggttgctgttggccat 135
>gb|AW679757.1|AW679757 WS1_31_G12.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 686
Score = 202 bits (102), Expect = 5e-050
Identities = 309/378 (81%)
Strand = Plus / Minus
Query: 531 gtccactccttggctgtttcaacagcttctacctcattggatttccagtgctttgcaatg 590
|||||||| || |||||||| |||||||| | ||||| | |||||||||||||| |
Sbjct: 378 gtccactctttagctgtttctacagcttcagcttcattagccttccagtgctttgccaca 319
Query: 591 ttatcggagagagggtcatctggatttggtgcactcagtagagcctgtatactcaaaaga 650
|| |||| || |||||||| || ||||| ||||| || | ||||| || ||||| | |
Sbjct: 318 ttgtcggcaagtgggtcatcagggtttggagcactaagcaatgcctggatgctcaataaa 259
Query: 651 actgttcgaatctgaagtgctgggctccatttgtccttgagaatgtcgaggcatatccta 710
||||||||||||||||| || || ||||| |||||||| | ||| || ||||||||||||
Sbjct: 258 actgttcgaatctgaagggcaggactccacttgtccttcaaaatatcaaggcatatccta 199
Query: 711 ccaagcttgtcaatgttgggatgataaatcttggtcagaaacctaacctttggggcagcc 770
||||||||||||||||| || |||||||| || || ||||| | ||||||||| | ||||
Sbjct: 198 ccaagcttgtcaatgttagggtgataaatttttgtgagaaaacgaacctttggtggagcc 139
Query: 771 atgggatattcctcaggtaaaaagagttcaagcttaaaaactccaccttcatagggcgac 830
|| |||||||| ||||| || || | || ||||| |||||||| || || || ||||||
Sbjct: 138 attggatattcttcaggcaagaataactcgagcttgaaaactcctccctcgtatggcgac 79
Query: 831 tgcgccggcccaaggatcataacgttgaagtagcgcatgttctcctccgagggcgacgcg 890
|||| || ||||||||||| || ||||||||||||||||||||||| || ||||| ||
Sbjct: 78 tgcgatggtccaaggatcatgacattgaagtagcgcatgttctcctctgatggcgaggca 19
Query: 891 ctgatccccggcgctggc 908
||||| || || ||||||
Sbjct: 18 ctgattcctggagctggc 1
>gb|BG464027.1|BG464027 EM1_52_G07.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 657
Score = 198 bits (100), Expect = 8e-049
Identities = 292/356 (82%)
Strand = Plus / Minus
Query: 531 gtccactccttggctgtttcaacagcttctacctcattggatttccagtgctttgcaatg 590
|||||||| || |||||||| |||||||| | ||||| | |||||||||||||| |
Sbjct: 357 gtccactctttagctgtttctacagcttcagcttcattagccttccagtgctttgccaca 298
Query: 591 ttatcggagagagggtcatctggatttggtgcactcagtagagcctgtatactcaaaaga 650
|| |||| || |||||||| || ||||| ||||| || | ||||| || ||||| | |
Sbjct: 297 ttgtcggcaagtgggtcatcagggtttggagcactaagcaatgcctggatgctcaataaa 238
Query: 651 actgttcgaatctgaagtgctgggctccatttgtccttgagaatgtcgaggcatatccta 710
||||||||||||||||| || || ||||| |||||||| | ||| || ||||||||||||
Sbjct: 237 actgttcgaatctgaagggcaggactccacttgtccttcaaaatatcaaggcatatccta 178
Query: 711 ccaagcttgtcaatgttgggatgataaatcttggtcagaaacctaacctttggggcagcc 770
||||||||||||||||| || |||||||| || || ||||| | ||||||||| | ||||
Sbjct: 177 ccaagcttgtcaatgttagggtgataaatttttgtgagaaaacgaacctttggtggagcc 118
Query: 771 atgggatattcctcaggtaaaaagagttcaagcttaaaaactccaccttcatagggcgac 830
|| |||||||| ||||| || || | || ||||| |||||||| || || || ||||||
Sbjct: 117 attggatattcttcaggcaagaataactcgagcttgaaaactcctccctcgtatggcgac 58
Query: 831 tgcgccggcccaaggatcataacgttgaagtagcgcatgttctcctccgagggcga 886
|||| || ||||||||||| || ||||||||||||||||||||||| || |||||
Sbjct: 57 tgcgatggtccaaggatcatgacattgaagtagcgcatgttctcctctgatggcga 2
>gb|CW147364.1|CW147364 104_540_11139473_148_34992_069 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11139473, DNA
sequence
Length = 302
Score = 196 bits (99), Expect = 3e-048
Identities = 129/139 (92%)
Strand = Plus / Minus
Query: 211 tgcaaccaagctaaccagcctcagttccaacattatgaacagttgagaagctcttctaca 270
|||||||||||||||||||||||||| || || |||| ||||||||||| ||||||||||
Sbjct: 139 tgcaaccaagctaaccagcctcagtttcagcactatggacagttgagaaactcttctaca 80
Query: 271 tgaagtgacaaatatattagagtaactgcaagttctaccacatatactgattagtcaaag 330
||||||||||||||||||| |||||| ||||||||||||||| ||| ||| |||||||||
Sbjct: 79 tgaagtgacaaatatattaaagtaacagcaagttctaccacagataatgagtagtcaaag 20
Query: 331 gtgcccaaaggtaaaggga 349
|||||||||||||||||||
Sbjct: 19 gtgcccaaaggtaaaggga 1
>gb|CD222465.1|CD222465 CCC1_22_E06.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_22_E06_A007 3', mRNA sequence
Length = 647
Score = 196 bits (99), Expect = 3e-048
Identities = 285/347 (82%)
Strand = Plus / Minus
Query: 531 gtccactccttggctgtttcaacagcttctacctcattggatttccagtgctttgcaatg 590
|||||||| || |||||||| |||||||| | ||||| | |||||||||||||| |
Sbjct: 355 gtccactctttagctgtttctacagcttcagcttcattagccttccagtgctttgccaca 296
Query: 591 ttatcggagagagggtcatctggatttggtgcactcagtagagcctgtatactcaaaaga 650
|| |||| || |||||||| || ||||| ||||| || | ||||| || ||||| | |
Sbjct: 295 ttgtcggcaagtgggtcatcagggtttggagcactaagcaatgcctggatgctcaataaa 236
Query: 651 actgttcgaatctgaagtgctgggctccatttgtccttgagaatgtcgaggcatatccta 710
||||||||||||||||| || || ||||| |||||||| | ||| || ||||||||||||
Sbjct: 235 actgttcgaatctgaagggcaggactccacttgtccttcaaaatatcaaggcatatccta 176
Query: 711 ccaagcttgtcaatgttgggatgataaatcttggtcagaaacctaacctttggggcagcc 770
||||||||||||||||| || |||||||| || || ||||| | ||||||||| | ||||
Sbjct: 175 ccaagcttgtcaatgttagggtgataaatttttgtgagaaaacgaacctttggtggagcc 116
Query: 771 atgggatattcctcaggtaaaaagagttcaagcttaaaaactccaccttcatagggcgac 830
|| |||||||| ||||| || || | || ||||| |||||||| || || || ||||||
Sbjct: 115 attggatattcttcaggcaagaataactcgagcttgaaaactcctccctcgtatggcgac 56
Query: 831 tgcgccggcccaaggatcataacgttgaagtagcgcatgttctcctc 877
|||| || ||||||||||| || |||||||||||||||||||||||
Sbjct: 55 tgcgatggtccaaggatcatgacattgaagtagcgcatgttctcctc 9
>gb|BE365066.1|BE365066 PI1_24_D07.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 546
Score = 186 bits (94), Expect = 3e-045
Identities = 211/250 (84%)
Strand = Plus / Minus
Query: 716 cttgtcaatgttgggatgataaatcttggtcagaaacctaacctttggggcagccatggg 775
|||||||||||| || |||||||| || || ||||| | ||||||||| | |||||| ||
Sbjct: 258 cttgtcaatgttagggtgataaatttttgtgagaaaacgaacctttggtggagccattgg 199
Query: 776 atattcctcaggtaaaaagagttcaagcttaaaaactccaccttcatagggcgactgcgc 835
|||||| ||||| || || | || ||||| |||||||| || || || ||||||||||
Sbjct: 198 atattcttcaggcaagaataactcgagcttgaaaactcctccctcgtatggcgactgcga 139
Query: 836 cggcccaaggatcataacgttgaagtagcgcatgttctcctccgagggcgacgcgctgat 895
|| ||||||||||| || ||||||||||||||||||||||| || ||||| || |||||
Sbjct: 138 tggtccaaggatcatgacattgaagtagcgcatgttctcctctgatggcgaggcactgat 79
Query: 896 ccccggcgctggctcgctgagcagtcgctgcgtctccttgatgatccgccgcgggaggtt 955
|| || |||||||||||||||| |||||||||||||||||||| || || ||||||||
Sbjct: 78 tcctggagctggctcgctgagcaaccgctgcgtctccttgatgatgcggcgggggaggtt 19
Query: 956 gctgttggcc 965
||||||||||
Sbjct: 18 gctgttggcc 9
Score = 71.9 bits (36), Expect = 1e-010
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 650 aactgttcgaatctgaagtgctgggctccatttgtccttgagaatgtcgaggcatatcct 709
|||||||||||||||||| || || ||||| |||||||| | ||| || |||||||||||
Sbjct: 394 aactgttcgaatctgaagggcaggactccacttgtccttcaaaatatcaaggcatatcct 335
Query: 710 accaagct 717
||||||||
Sbjct: 334 accaagct 327
>gb|BE365067.1|BE365067 PI1_24_D06.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 576
Score = 186 bits (94), Expect = 3e-045
Identities = 211/250 (84%)
Strand = Plus / Minus
Query: 716 cttgtcaatgttgggatgataaatcttggtcagaaacctaacctttggggcagccatggg 775
|||||||||||| || |||||||| || || ||||| | ||||||||| | |||||| ||
Sbjct: 258 cttgtcaatgttagggtgataaatttttgtgagaaaacgaacctttggtggagccattgg 199
Query: 776 atattcctcaggtaaaaagagttcaagcttaaaaactccaccttcatagggcgactgcgc 835
|||||| ||||| || || | || ||||| |||||||| || || || ||||||||||
Sbjct: 198 atattcttcaggcaagaataactcgagcttgaaaactcctccctcgtatggcgactgcga 139
Query: 836 cggcccaaggatcataacgttgaagtagcgcatgttctcctccgagggcgacgcgctgat 895
|| ||||||||||| || ||||||||||||||||||||||| || ||||| || |||||
Sbjct: 138 tggtccaaggatcatgacattgaagtagcgcatgttctcctctgatggcgaggcactgat 79
Query: 896 ccccggcgctggctcgctgagcagtcgctgcgtctccttgatgatccgccgcgggaggtt 955
|| || |||||||||||||||| |||||||||||||||||||| || || ||||||||
Sbjct: 78 tcctggagctggctcgctgagcaaccgctgcgtctccttgatgatgcggcgggggaggtt 19
Query: 956 gctgttggcc 965
||||||||||
Sbjct: 18 gctgttggcc 9
Score = 71.9 bits (36), Expect = 1e-010
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 650 aactgttcgaatctgaagtgctgggctccatttgtccttgagaatgtcgaggcatatcct 709
|||||||||||||||||| || || ||||| |||||||| | ||| || |||||||||||
Sbjct: 394 aactgttcgaatctgaagggcaggactccacttgtccttcaaaatatcaaggcatatcct 335
Query: 710 accaagct 717
||||||||
Sbjct: 334 accaagct 327
>gb|BE365076.1|BE365076 PI1_24_F07.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 559
Score = 186 bits (94), Expect = 3e-045
Identities = 211/250 (84%)
Strand = Plus / Minus
Query: 716 cttgtcaatgttgggatgataaatcttggtcagaaacctaacctttggggcagccatggg 775
|||||||||||| || |||||||| || || ||||| | ||||||||| | |||||| ||
Sbjct: 258 cttgtcaatgttagggtgataaatttttgtgagaaaacgaacctttggtggagccattgg 199
Query: 776 atattcctcaggtaaaaagagttcaagcttaaaaactccaccttcatagggcgactgcgc 835
|||||| ||||| || || | || ||||| |||||||| || || || ||||||||||
Sbjct: 198 atattcttcaggcaagaataactcgagcttgaaaactcctccctcgtatggcgactgcga 139
Query: 836 cggcccaaggatcataacgttgaagtagcgcatgttctcctccgagggcgacgcgctgat 895
|| ||||||||||| || ||||||||||||||||||||||| || ||||| || |||||
Sbjct: 138 tggtccaaggatcatgacattgaagtagcgcatgttctcctctgatggcgaggcactgat 79
Query: 896 ccccggcgctggctcgctgagcagtcgctgcgtctccttgatgatccgccgcgggaggtt 955
|| || |||||||||||||||| |||||||||||||||||||| || || ||||||||
Sbjct: 78 tcctggagctggctcgctgagcaaccgctgcgtctccttgatgatgcggcgggggaggtt 19
Query: 956 gctgttggcc 965
||||||||||
Sbjct: 18 gctgttggcc 9
Score = 71.9 bits (36), Expect = 1e-010
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 650 aactgttcgaatctgaagtgctgggctccatttgtccttgagaatgtcgaggcatatcct 709
|||||||||||||||||| || || ||||| |||||||| | ||| || |||||||||||
Sbjct: 394 aactgttcgaatctgaagggcaggactccacttgtccttcaaaatatcaaggcatatcct 335
Query: 710 accaagct 717
||||||||
Sbjct: 334 accaagct 327
>gb|BE365077.1|BE365077 PI1_24_F06.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 628
Score = 186 bits (94), Expect = 3e-045
Identities = 211/250 (84%)
Strand = Plus / Minus
Query: 716 cttgtcaatgttgggatgataaatcttggtcagaaacctaacctttggggcagccatggg 775
|||||||||||| || |||||||| || || ||||| | ||||||||| | |||||| ||
Sbjct: 258 cttgtcaatgttagggtgataaatttttgtgagaaaacgaacctttggtggagccattgg 199
Query: 776 atattcctcaggtaaaaagagttcaagcttaaaaactccaccttcatagggcgactgcgc 835
|||||| ||||| || || | || ||||| |||||||| || || || ||||||||||
Sbjct: 198 atattcttcaggcaagaataactcgagcttgaaaactcctccctcgtatggcgactgcga 139
Query: 836 cggcccaaggatcataacgttgaagtagcgcatgttctcctccgagggcgacgcgctgat 895
|| ||||||||||| || ||||||||||||||||||||||| || ||||| || |||||
Sbjct: 138 tggtccaaggatcatgacattgaagtagcgcatgttctcctctgatggcgaggcactgat 79
Query: 896 ccccggcgctggctcgctgagcagtcgctgcgtctccttgatgatccgccgcgggaggtt 955
|| || |||||||||||||||| |||||||||||||||||||| || || ||||||||
Sbjct: 78 tcctggagctggctcgctgagcaaccgctgcgtctccttgatgatgcggcgggggaggtt 19
Query: 956 gctgttggcc 965
||||||||||
Sbjct: 18 gctgttggcc 9
Score = 71.9 bits (36), Expect = 1e-010
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 650 aactgttcgaatctgaagtgctgggctccatttgtccttgagaatgtcgaggcatatcct 709
|||||||||||||||||| || || ||||| |||||||| | ||| || |||||||||||
Sbjct: 394 aactgttcgaatctgaagggcaggactccacttgtccttcaaaatatcaaggcatatcct 335
Query: 710 accaagct 717
||||||||
Sbjct: 334 accaagct 327
>gb|BE365080.1|BE365080 PI1_24_E07.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 624
Score = 186 bits (94), Expect = 3e-045
Identities = 211/250 (84%)
Strand = Plus / Minus
Query: 716 cttgtcaatgttgggatgataaatcttggtcagaaacctaacctttggggcagccatggg 775
|||||||||||| || |||||||| || || ||||| | ||||||||| | |||||| ||
Sbjct: 258 cttgtcaatgttagggtgataaatttttgtgagaaaacgaacctttggtggagccattgg 199
Query: 776 atattcctcaggtaaaaagagttcaagcttaaaaactccaccttcatagggcgactgcgc 835
|||||| ||||| || || | || ||||| |||||||| || || || ||||||||||
Sbjct: 198 atattcttcaggcaagaataactcgagcttgaaaactcctccctcgtatggcgactgcga 139
Query: 836 cggcccaaggatcataacgttgaagtagcgcatgttctcctccgagggcgacgcgctgat 895
|| ||||||||||| || ||||||||||||||||||||||| || ||||| || |||||
Sbjct: 138 tggtccaaggatcatgacattgaagtagcgcatgttctcctctgatggcgaggcactgat 79
Query: 896 ccccggcgctggctcgctgagcagtcgctgcgtctccttgatgatccgccgcgggaggtt 955
|| || |||||||||||||||| |||||||||||||||||||| || || ||||||||
Sbjct: 78 tcctggagctggctcgctgagcaaccgctgcgtctccttgatgatgcggcgggggaggtt 19
Query: 956 gctgttggcc 965
||||||||||
Sbjct: 18 gctgttggcc 9
Score = 71.9 bits (36), Expect = 1e-010
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 650 aactgttcgaatctgaagtgctgggctccatttgtccttgagaatgtcgaggcatatcct 709
|||||||||||||||||| || || ||||| |||||||| | ||| || |||||||||||
Sbjct: 394 aactgttcgaatctgaagggcaggactccacttgtccttcaaaatatcaaggcatatcct 335
Query: 710 accaagct 717
||||||||
Sbjct: 334 accaagct 327
>gb|BE365081.1|BE365081 PI1_24_E06.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 547
Score = 186 bits (94), Expect = 3e-045
Identities = 211/250 (84%)
Strand = Plus / Minus
Query: 716 cttgtcaatgttgggatgataaatcttggtcagaaacctaacctttggggcagccatggg 775
|||||||||||| || |||||||| || || ||||| | ||||||||| | |||||| ||
Sbjct: 258 cttgtcaatgttagggtgataaatttttgtgagaaaacgaacctttggtggagccattgg 199
Query: 776 atattcctcaggtaaaaagagttcaagcttaaaaactccaccttcatagggcgactgcgc 835
|||||| ||||| || || | || ||||| |||||||| || || || ||||||||||
Sbjct: 198 atattcttcaggcaagaataactcgagcttgaaaactcctccctcgtatggcgactgcga 139
Query: 836 cggcccaaggatcataacgttgaagtagcgcatgttctcctccgagggcgacgcgctgat 895
|| ||||||||||| || ||||||||||||||||||||||| || ||||| || |||||
Sbjct: 138 tggtccaaggatcatgacattgaagtagcgcatgttctcctctgatggcgaggcactgat 79
Query: 896 ccccggcgctggctcgctgagcagtcgctgcgtctccttgatgatccgccgcgggaggtt 955
|| || |||||||||||||||| |||||||||||||||||||| || || ||||||||
Sbjct: 78 tcctggagctggctcgctgagcaaccgctgcgtctccttgatgatgcggcgggggaggtt 19
Query: 956 gctgttggcc 965
||||||||||
Sbjct: 18 gctgttggcc 9
Score = 71.9 bits (36), Expect = 1e-010
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 650 aactgttcgaatctgaagtgctgggctccatttgtccttgagaatgtcgaggcatatcct 709
|||||||||||||||||| || || ||||| |||||||| | ||| || |||||||||||
Sbjct: 394 aactgttcgaatctgaagggcaggactccacttgtccttcaaaatatcaaggcatatcct 335
Query: 710 accaagct 717
||||||||
Sbjct: 334 accaagct 327
>gb|BE365095.1|BE365095 PI1_24_C06.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 355
Score = 186 bits (94), Expect = 3e-045
Identities = 211/250 (84%)
Strand = Plus / Minus
Query: 716 cttgtcaatgttgggatgataaatcttggtcagaaacctaacctttggggcagccatggg 775
|||||||||||| || |||||||| || || ||||| | ||||||||| | |||||| ||
Sbjct: 258 cttgtcaatgttagggtgataaatttttgtgagaaaacgaacctttggtggagccattgg 199
Query: 776 atattcctcaggtaaaaagagttcaagcttaaaaactccaccttcatagggcgactgcgc 835
|||||| ||||| || || | || ||||| |||||||| || || || ||||||||||
Sbjct: 198 atattcttcaggcaagaataactcgagcttgaaaactcctccctcgtatggcgactgcga 139
Query: 836 cggcccaaggatcataacgttgaagtagcgcatgttctcctccgagggcgacgcgctgat 895
|| ||||||||||| || ||||||||||||||||||||||| || ||||| || |||||
Sbjct: 138 tggtccaaggatcatgacattgaagtagcgcatgttctcctctgatggcgaggcactgat 79
Query: 896 ccccggcgctggctcgctgagcagtcgctgcgtctccttgatgatccgccgcgggaggtt 955
|| || |||||||||||||||| |||||||||||||||||||| || || ||||||||
Sbjct: 78 tcctggagctggctcgctgagcaaccgctgcgtctccttgatgatgcggcgggggaggtt 19
Query: 956 gctgttggcc 965
||||||||||
Sbjct: 18 gctgttggcc 9
>gb|CW069103.1|CW069103 104_318_10525635_1_30095 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10525635, DNA
sequence
Length = 543
Score = 167 bits (84), Expect = 3e-039
Identities = 96/100 (96%)
Strand = Plus / Minus
Query: 544 ctgtttcaacagcttctacctcattggatttccagtgctttgcaatgttatcggagagag 603
||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 452 ctgtttcaacagcttctacctcattggctttccagtgctttgcaatgttatcggaaagag 393
Query: 604 ggtcatctggatttggtgcactcagtagagcctgtatact 643
|||||||||||||||| |||||||| ||||||||||||||
Sbjct: 392 ggtcatctggatttggcgcactcaggagagcctgtatact 353
Score = 127 bits (64), Expect = 2e-027
Identities = 73/76 (96%)
Strand = Plus / Minus
Query: 642 ctcaaaagaactgttcgaatctgaagtgctgggctccatttgtccttgagaatgtcgagg 701
||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 128 ctcaaaagaaccgtgcgaatctgaagtgccgggctccatttgtccttgagaatgtcgagg 69
Query: 702 catatcctaccaagct 717
||||||||||||||||
Sbjct: 68 catatcctaccaagct 53
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 277,258
Number of Sequences: 832831
Number of extensions: 277258
Number of successful extensions: 74318
Number of sequences better than 0.5: 72
Number of HSP's better than 0.5 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74148
Number of HSP's gapped (non-prelim): 96
length of query: 1104
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1084
effective length of database: 474,703,049
effective search space: 514578105116
effective search space used: 514578105116
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)