BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1716236.2.2
(868 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD225320.1|CD225320 CCC1_39_G06.g1_A007 Callus culture/c... 850 0.0
gb|CN152557.1|CN152557 WOUND1_82_G03.g1_A002 Wounded leaves... 842 0.0
gb|CX611901.1|CX611901 ANR1_27_H04.b1_A002 Anaerobic roots ... 842 0.0
gb|CD432007.1|CD432007 ETH1_12_A01.g1_A002 Ethylene-treated... 837 0.0
gb|CX606873.1|CX606873 ANR1_5_A05.g1_A002 Anaerobic roots S... 837 0.0
gb|AW745063.1|AW745063 LG1_386_C08.b1_A002 Light Grown 1 (L... 835 0.0
gb|BE367620.1|BE367620 PI1_9_A07.b1_A002 Pathogen induced 1... 831 0.0
gb|CX611989.1|CX611989 ANR1_27_H04.g1_A002 Anaerobic roots ... 829 0.0
gb|BE367055.1|BE367055 PI1_42_F01.g2_A002 Pathogen induced ... 827 0.0
gb|CN152474.1|CN152474 WOUND1_82_G03.b1_A002 Wounded leaves... 827 0.0
gb|CX606782.1|CX606782 ANR1_5_A05.b1_A002 Anaerobic roots S... 827 0.0
gb|CN127333.1|CN127333 RHOH1_22_H09.b1_A002 Acid- and alkal... 819 0.0
gb|CF486690.1|CF486690 POL1_39_D12.b1_A002 Pollen Sorghum b... 817 0.0
gb|CX607625.1|CX607625 ANR1_29_G03.g1_A002 Anaerobic roots ... 809 0.0
gb|BG240501.1|BG240501 OV1_30_G09.b1_A002 Ovary 1 (OV1) Sor... 783 0.0
gb|BE367626.1|BE367626 PI1_9_A07.g1_A002 Pathogen induced 1... 767 0.0
gb|CD431965.1|CD431965 ETH1_12_A01.b1_A002 Ethylene-treated... 763 0.0
gb|BG239925.1|BG239925 OV1_30_G09.g1_A002 Ovary 1 (OV1) Sor... 728 0.0
gb|CN127420.1|CN127420 RHOH1_22_H09.g3_A002 Acid- and alkal... 728 0.0
gb|BG048734.1|BG048734 OV1_22_C12.b1_A002 Ovary 1 (OV1) Sor... 644 0.0
gb|CF073159.1|CF073159 FE1_28_D08.b1_A002 Iron-deficient se... 597 e-169
gb|BE366997.1|BE366997 PI1_42_F01.g1_A002 Pathogen induced ... 504 e-141
gb|BG049039.1|BG049039 OV1_22_D12.g1_A002 Ovary 1 (OV1) Sor... 426 e-117
gb|BE599149.1|BE599149 PI1_85_H12.b1_A002 Pathogen induced ... 412 e-113
gb|CN141039.1|CN141039 OX1_49_A08.b1_A002 Oxidatively-stres... 412 e-113
gb|CD431369.1|CD431369 ETH1_8_A10.g1_A002 Ethylene-treated ... 404 e-111
gb|CD205394.1|CD205394 HS1_13_A10.g1_A012 Heat-shocked seed... 385 e-105
gb|BE597762.1|BE597762 PI1_85_H12.g1_A002 Pathogen induced ... 343 2e-092
gb|BF585878.1|BF585878 FM1_25_F06.g1_A003 Floral-Induced Me... 331 6e-089
gb|BE601217.1|BE601217 PI1_90_D05.g1_A002 Pathogen induced ... 327 1e-087
gb|BG560107.1|BG560107 RHIZ2_69_D12.b1_A003 Rhizome2 (RHIZ2... 305 4e-081
gb|BG048781.1|BG048781 OV1_23_A03.b1_A002 Ovary 1 (OV1) Sor... 276 3e-072
gb|CF486773.1|CF486773 POL1_39_D12.g1_A002 Pollen Sorghum b... 276 3e-072
gb|CW180084.1|CW180084 104_594_11160449_148_36634_071 Sorgh... 258 8e-067
gb|CW365759.1|CW365759 fsbb001f038h04f0 Sorghum methylation... 258 8e-067
gb|CD431326.1|CD431326 ETH1_8_A10.b1_A002 Ethylene-treated ... 258 8e-067
gb|CF432310.1|CF432310 NIT1_15_F12.g1_A002 Nitrogen-deficie... 256 3e-066
gb|CW452618.1|CW452618 fsbb001f193e04k0 Sorghum methylation... 230 2e-058
gb|AW745429.1|AW745429 WS1_34_A12.b1_A002 Water-stressed 1 ... 214 1e-053
gb|AW745648.1|AW745648 WS1_36_D06.b1_A002 Water-stressed 1 ... 214 1e-053
gb|AW924658.1|AW924658 WS1_71_H06.b1_A002 Water-stressed 1 ... 214 1e-053
gb|BE362368.1|BE362368 DG1_86_E12.b1_A002 Dark Grown 1 (DG1... 214 1e-053
gb|BE593870.1|BE593870 WS1_103_D04.g1_A002 Water-stressed 1... 214 1e-053
gb|BE593878.1|BE593878 WS1_103_E01.g1_A002 Water-stressed 1... 214 1e-053
gb|BM323706.1|BM323706 PIC1_22_D03.b1_A002 Pathogen-infecte... 214 1e-053
gb|BM324291.1|BM324291 PIC1_26_E11.b1_A002 Pathogen-infecte... 214 1e-053
gb|CD226755.1|CD226755 CCC1_47_E08.g1_A007 Callus culture/c... 214 1e-053
gb|CD462073.1|CD462073 SA1_39_H12.b1_A002 Salicylic acid-tr... 214 1e-053
gb|CN145142.1|CN145142 WOUND1_27_C01.b2_A002 Wounded leaves... 214 1e-053
gb|DN551766.1|DN551766 pSPR-RT-A-H1_G05_C246 pSPR Sorghum p... 214 1e-053
gb|AW678262.1|AW678262 WS1_14_B08.b1_A002 Water-stressed 1 ... 212 4e-053
gb|BE593630.1|BE593630 WS1_99_A04.b1_A002 Water-stressed 1 ... 212 4e-053
gb|AW678504.1|AW678504 WS1_16_E12.b1_A002 Water-stressed 1 ... 210 2e-052
gb|AW680263.1|AW680263 WS1_50_A10.g1_A002 Water-stressed 1 ... 210 2e-052
gb|CW156012.1|CW156012 104_558_11146447_116_36367_020 Sorgh... 208 6e-052
gb|CW156013.1|CW156013 104_558_11146447_148_36368_020 Sorgh... 208 6e-052
gb|CW390946.1|CW390946 fsbb001f076n13f0 Sorghum methylation... 208 6e-052
gb|BG240634.1|BG240634 OV1_32_C11.b1_A002 Ovary 1 (OV1) Sor... 208 6e-052
gb|BG933602.1|BG933602 OV1_32_C11.g1_A002 Ovary 1 (OV1) Sor... 208 6e-052
gb|BM328789.1|BM328789 PIC1_26_E11.g1_A002 Pathogen-infecte... 208 6e-052
gb|BE593967.1|BE593967 WS1_104_E12.g1_A002 Water-stressed 1... 206 2e-051
gb|CD224628.1|CD224628 CCC1_35_G07.b1_A007 Callus culture/c... 206 2e-051
gb|CD224718.1|CD224718 CCC1_35_G07.g1_A007 Callus culture/c... 206 2e-051
gb|AW745320.1|AW745320 WS1_33_D01.b1_A002 Water-stressed 1 ... 200 2e-049
gb|CF428071.1|CF428071 PH1_12_D10.g1_A002 Phosphorous-defic... 200 2e-049
gb|AW679960.1|AW679960 WS1_34_A12.g1_A002 Water-stressed 1 ... 196 2e-048
gb|AW745645.1|AW745645 WS1_36_D10.b1_A002 Water-stressed 1 ... 196 2e-048
gb|BE593346.1|BE593346 WS1_100_F07.g1_A002 Water-stressed 1... 196 2e-048
gb|CD226662.1|CD226662 CCC1_47_E08.b1_A007 Callus culture/c... 196 2e-048
gb|BE600803.1|BE600803 PI1_90_D05.b1_A002 Pathogen induced ... 192 4e-047
gb|AW563833.1|AW563833 LG1_272_B01.b1_A002 Light Grown 1 (L... 190 1e-046
gb|BE126239.1|BE126239 DG1_68_F12.b1_A002 Dark Grown 1 (DG1... 190 1e-046
gb|BE361005.1|BE361005 DG1_68_F12.g1_A002 Dark Grown 1 (DG1... 190 1e-046
gb|AW678345.1|AW678345 WS1_14_B08.g1_A002 Water-stressed 1 ... 188 6e-046
gb|AW678552.1|AW678552 WS1_16_E12.g1_A002 Water-stressed 1 ... 186 2e-045
gb|BE363843.1|BE363843 WS1_71_H06.g2_A002 Water-stressed 1 ... 184 9e-045
gb|AW924178.1|AW924178 WS1_50_A10.b1_A002 Water-stressed 1 ... 182 4e-044
gb|AW745689.1|AW745689 WS1_36_D06.g1_A002 Water-stressed 1 ... 180 1e-043
gb|AW745686.1|AW745686 WS1_36_D10.g1_A002 Water-stressed 1 ... 178 6e-043
gb|BE357753.1|BE357753 DG1_22_H07.b1_A002 Dark Grown 1 (DG1... 178 6e-043
gb|CF073737.1|CF073737 FE1_12_B03.b1_A002 Iron-deficient se... 178 6e-043
gb|CW445699.1|CW445699 fsbb001f170p19k0 Sorghum methylation... 174 9e-042
gb|BF587789.1|BF587789 FM1_40_E10.g1_A003 Floral-Induced Me... 170 1e-040
gb|CN145221.1|CN145221 WOUND1_27_C01.g1_A002 Wounded leaves... 167 2e-039
gb|AW679853.1|AW679853 WS1_32_F03.g1_A002 Water-stressed 1 ... 159 5e-037
gb|BE362458.1|BE362458 DG1_86_E12.g1_A002 Dark Grown 1 (DG1... 159 5e-037
gb|BE592667.1|BE592667 WS1_96_F12.b1_A002 Water-stressed 1 ... 159 5e-037
gb|BE638204.1|BE638204 WS1_96_F12.g1_A002 Water-stressed 1 ... 159 5e-037
gb|BF317746.1|BF317746 OV1_12_H07.g1_A002 Ovary 1 (OV1) Sor... 159 5e-037
gb|AW287369.2|AW287369 LG1_303_A08.b1_A002 Light Grown 1 (L... 157 2e-036
gb|AW287624.2|AW287624 LG1_244_D10.b1_A002 Light Grown 1 (L... 157 2e-036
gb|BE594292.1|BE594292 WS1_104_E12.b1_A002 Water-stressed 1... 157 2e-036
gb|BF585772.1|BF585772 FM1_24_D06.b1_A003 Floral-Induced Me... 157 2e-036
gb|BG048795.1|BG048795 OV1_23_B08.b1_A002 Ovary 1 (OV1) Sor... 157 2e-036
gb|CW390947.1|CW390947 fsbb001f076n13k0 Sorghum methylation... 153 3e-035
gb|AI724180.1|AI724180 RHIZ1_8_B01.y2_A001 Rhizome1 (RHIZ1)... 151 1e-034
gb|AW677219.1|AW677219 DG1_6_A11.g1_A002 Dark Grown 1 (DG1)... 151 1e-034
gb|AW679910.1|AW679910 WS1_33_D01.g1_A002 Water-stressed 1 ... 151 1e-034
gb|BE592228.1|BE592228 WS1_90_A11.g1_A002 Water-stressed 1 ... 151 1e-034
gb|BE592760.1|BE592760 WS1_90_A11.b1_A002 Water-stressed 1 ... 151 1e-034
gb|BE593217.1|BE593217 WS1_99_A04.g1_A002 Water-stressed 1 ... 151 1e-034
gb|BG049089.1|BG049089 OV1_23_B08.g1_A002 Ovary 1 (OV1) Sor... 151 1e-034
gb|BF704736.1|BF704736 FM1_50_H05.b1_A003 Floral-Induced Me... 149 5e-034
gb|CL186868.1|CL186868 104_402_10900493_114_32432_031 Sorgh... 145 8e-033
gb|BF585687.1|BF585687 FM1_24_D06.g1_A003 Floral-Induced Me... 145 8e-033
gb|AW678092.1|AW678092 WS1_13_H08.b1_A002 Water-stressed 1 ... 143 3e-032
gb|AW678161.1|AW678161 WS1_13_H08.g1_A002 Water-stressed 1 ... 143 3e-032
gb|BF420917.1|BF420917 OV1_12_H07.b1_A002 Ovary 1 (OV1) Sor... 143 3e-032
gb|BF704689.1|BF704689 FM1_50_C04.b1_A003 Floral-Induced Me... 139 5e-031
gb|CD226737.1|CD226737 CCC1_47_G10.g1_A007 Callus culture/c... 137 2e-030
gb|CX610858.1|CX610858 ANR1_21_F01.b1_A002 Anaerobic roots ... 137 2e-030
gb|AW925117.1|AW925117 WS1_75_F03.b1_A002 Water-stressed 1 ... 133 3e-029
gb|AW678998.1|AW678998 WS1_21_D06.g1_A002 Water-stressed 1 ... 131 1e-028
gb|BM328207.1|BM328207 PIC1_22_D03.g1_A002 Pathogen-infecte... 131 1e-028
gb|CD206803.1|CD206803 HS1_25_C12.b1_A012 Heat-shocked seed... 131 1e-028
gb|CD209748.1|CD209748 HS1_54_D07.g1_A012 Heat-shocked seed... 131 1e-028
gb|CW467204.1|CW467204 fsbb001f218m20k0 Sorghum methylation... 127 2e-027
gb|CW498507.1|CW498507 fsbb001f291m12k0 Sorghum methylation... 127 2e-027
gb|BG048078.1|BG048078 OV1_27_D03.g1_A002 Ovary 1 (OV1) Sor... 127 2e-027
gb|AW283431.2|AW283431 LG1_272_B01.g1_A002 Light Grown 1 (L... 127 2e-027
gb|CF480313.1|CF480313 POL1_65_A12.b1_A002 Pollen Sorghum b... 127 2e-027
gb|AW923897.1|AW923897 WS1_30_F04.b1_A002 Water-stressed 1 ... 125 7e-027
gb|CD209723.1|CD209723 HS1_54_D07.b1_A012 Heat-shocked seed... 125 7e-027
gb|CW180083.1|CW180083 104_594_11160449_116_36638_071 Sorgh... 123 3e-026
gb|BE593552.1|BE593552 WS1_100_F07.b1_A002 Water-stressed 1... 119 4e-025
gb|BE594196.1|BE594196 WS1_103_E01.b1_A002 Water-stressed 1... 119 4e-025
gb|BG047752.1|BG047752 OV1_27_D03.b1_A002 Ovary 1 (OV1) Sor... 119 4e-025
gb|AW285366.1|AW285366 LG1_244_D10.g1_A002 Light Grown 1 (L... 113 3e-023
gb|BF588342.1|BF588342 FM1_40_E10.b1_A003 Floral-Induced Me... 113 3e-023
gb|CW243933.1|CW243933 104_704_11220318_116_37584_021 Sorgh... 111 1e-022
gb|BM326634.1|BM326634 PIC1_59_G09.b1_A002 Pathogen-infecte... 111 1e-022
gb|CN137948.1|CN137948 OX1_60_G01.g1_A002 Oxidatively-stres... 111 1e-022
gb|BG049075.1|BG049075 OV1_23_A03.g1_A002 Ovary 1 (OV1) Sor... 109 4e-022
gb|CW243934.1|CW243934 104_704_11220318_148_37583_021 Sorgh... 105 7e-021
gb|AI724634.1|AI724634 RHIZ1_11_A09.y2_A001 Rhizome1 (RHIZ1... 105 7e-021
gb|AW563829.1|AW563829 LG1_272_A01.b1_A002 Light Grown 1 (L... 103 3e-020
gb|BE364021.1|BE364021 PI1_11_F06.b1_A002 Pathogen induced ... 103 3e-020
gb|CX619784.1|CX619784 GABR1_47_G07.g1_A002 GA- or brassino... 103 3e-020
gb|CL186869.1|CL186869 104_402_10900493_116_32436_031 Sorgh... 100 4e-019
gb|BE367308.1|BE367308 PI1_44_D08.b1_A002 Pathogen induced ... 100 4e-019
gb|AW747605.1|AW747605 WS1_74_A11.g1_A002 Water-stressed 1 ... 94 3e-017
gb|CL175062.1|CL175062 104_380_10892137_148_31766_121 Sorgh... 92 1e-016
gb|CL184685.1|CL184685 104_398_10899021_114_32368_093 Sorgh... 92 1e-016
gb|CW102472.1|CW102472 104_470_11011357_148_34412_051 Sorgh... 92 1e-016
gb|AW282693.1|AW282693 LG1_303_A08.g1_A002 Light Grown 1 (L... 92 1e-016
gb|BE125980.1|BE125980 DG1_60_E11.b1_A002 Dark Grown 1 (DG1... 92 1e-016
gb|BF585958.1|BF585958 FM1_25_F06.b1_A003 Floral-Induced Me... 92 1e-016
gb|CN141122.1|CN141122 OX1_49_A08.g1_A002 Oxidatively-stres... 92 1e-016
gb|BE361796.1|BE361796 DG1_82_C11.b1_A002 Dark Grown 1 (DG1... 90 4e-016
gb|BE362086.1|BE362086 DG1_84_B11.b1_A002 Dark Grown 1 (DG1... 90 4e-016
gb|BE594187.1|BE594187 WS1_103_D04.b1_A002 Water-stressed 1... 90 4e-016
gb|BM317932.1|BM317932 PI1_13_C09.g9_A002 Pathogen induced ... 90 4e-016
gb|CD432789.1|CD432789 ETH1_33_A07.b1_A002 Ethylene-treated... 90 4e-016
gb|CF756204.1|CF756204 DSAF1_4_E05.b1_A011 Drought-stressed... 90 4e-016
gb|CF756289.1|CF756289 DSAF1_4_E05.g1_A011 Drought-stressed... 90 4e-016
gb|CF758180.1|CF758180 DSAF1_28_E04.g1_A011 Drought-stresse... 90 4e-016
gb|CL184686.1|CL184686 104_398_10899021_116_32372_093 Sorgh... 86 6e-015
gb|CW029452.1|CW029452 104_257_10499684_114_30401 Sorghum m... 86 6e-015
gb|CW029453.1|CW029453 104_257_10499684_116_30402 Sorghum m... 86 6e-015
gb|CW033445.1|CW033445 104_263_10501963_115_30360 Sorghum m... 86 6e-015
gb|CW110942.1|CW110942 104_484_11104021_148_34527_063 Sorgh... 86 6e-015
gb|CW179446.1|CW179446 104_593_11160103_148_36627_022 Sorgh... 86 6e-015
gb|CW428815.1|CW428815 fsbb001f141l13k0 Sorghum methylation... 86 6e-015
gb|BG559564.1|BG559564 RHIZ2_69_A07.g1_A003 Rhizome2 (RHIZ2... 84 2e-014
gb|CW323831.1|CW323831 104_818_11476840_116_35905_062 Sorgh... 80 4e-013
gb|BG559586.1|BG559586 RHIZ2_69_D12.g1_A003 Rhizome2 (RHIZ2... 80 4e-013
gb|BM318038.1|BM318038 PI1_36_C12.g9_A002 Pathogen induced ... 80 4e-013
gb|BM331700.1|BM331700 PIC1_59_G09.g1_A002 Pathogen-infecte... 80 4e-013
gb|CX619717.1|CX619717 GABR1_47_G07.b1_A002 GA- or brassino... 80 4e-013
gb|AW283489.1|AW283489 LG1_265_E04.g1_A002 Light Grown 1 (L... 78 2e-012
gb|AW565638.1|AW565638 LG1_347_G06.g1_A002 Light Grown 1 (L... 78 2e-012
gb|AW671514.1|AW671514 LG1_347_G06.b1_A002 Light Grown 1 (L... 78 2e-012
gb|AW924993.1|AW924993 WS1_74_A11.b1_A002 Water-stressed 1 ... 78 2e-012
gb|CD428668.1|CD428668 ETH1_33_A07.g1_A002 Ethylene-treated... 76 6e-012
gb|AW283280.1|AW283280 LG1_265_G04.g1_A002 Light Grown 1 (L... 74 2e-011
gb|CL182770.1|CL182770 104_394_10897712_116_31920_320 Sorgh... 72 9e-011
gb|CL182771.1|CL182771 104_394_10897712_148_31919_320 Sorgh... 72 9e-011
gb|CW317445.1|CW317445 104_809_11473417_148_35865_011 Sorgh... 72 9e-011
gb|CL702352.2|CL702352 SP__Ba0083L20.r SP__Ba Sorghum propi... 72 9e-011
gb|CN137878.1|CN137878 OX1_60_G01.b1_A002 Oxidatively-stres... 72 9e-011
gb|DN552439.1|DN552439 pSHR-L_F07_C060 pSHR Sorghum halepen... 72 9e-011
gb|CW033444.1|CW033444 104_263_10501963_114_30359 Sorghum m... 70 4e-010
gb|CW106043.1|CW106043 104_475_11013201_116_34456_039 Sorgh... 70 4e-010
gb|CW255048.1|CW255048 104_719_11226014_116_35123_055 Sorgh... 70 4e-010
gb|CW361760.1|CW361760 fsbb001f030i01k0 Sorghum methylation... 70 4e-010
gb|CW498506.1|CW498506 fsbb001f291m12f0 Sorghum methylation... 68 1e-009
gb|CL159646.1|CL159646 104_349_10804412_116_31382_236 Sorgh... 64 2e-008
gb|CW090370.1|CW090370 104_436_10949246_114_32605_059 Sorgh... 64 2e-008
gb|CW125765.1|CW125765 104_506_11112516_148_34727_046 Sorgh... 64 2e-008
gb|CW157624.1|CW157624 104_561_11147623_148_36388_030 Sorgh... 64 2e-008
gb|AW283560.1|AW283560 LG1_285_C06.g1_A002 Light Grown 1 (L... 62 9e-008
gb|AW923990.1|AW923990 WS1_32_F03.b1_A002 Water-stressed 1 ... 60 4e-007
gb|BF656463.1|BF656463 FM1_50_C04.g1_A003 Floral-Induced Me... 58 1e-006
gb|CL159645.1|CL159645 104_349_10804412_114_31381_236 Sorgh... 56 6e-006
gb|BM326626.1|BM326626 PIC1_59_F09.b1_A002 Pathogen-infecte... 54 2e-005
gb|CW090371.1|CW090371 104_436_10949246_116_32609_059 Sorgh... 50 3e-004
gb|CW146026.1|CW146026 104_538_11138773_116_34978_051 Sorgh... 44 0.021
gb|CW146027.1|CW146027 104_538_11138773_148_34982_051 Sorgh... 44 0.021
gb|CW171873.1|CW171873 104_582_11155973_116_36525_017 Sorgh... 44 0.021
gb|CW409745.1|CW409745 fsbb001f104d01f0 Sorghum methylation... 44 0.021
gb|CW428814.1|CW428814 fsbb001f141l13f0 Sorghum methylation... 44 0.021
gb|CW453823.1|CW453823 fsbb001f197p22k0 Sorghum methylation... 44 0.021
gb|CW299217.1|CW299217 104_782_11462996_116_36235_078 Sorgh... 42 0.084
gb|CW142664.1|CW142664 104_534_11136987_148_34946_014 Sorgh... 40 0.33
gb|CW283658.1|CW283658 104_760_11409362_148_35486_011 Sorgh... 40 0.33
gb|BE362559.1|BE362559 DG1_87_F09.g1_A002 Dark Grown 1 (DG1... 40 0.33
gb|BG240035.1|BG240035 OV1_17_B04.b1_A002 Ovary 1 (OV1) Sor... 40 0.33
>gb|CD225320.1|CD225320 CCC1_39_G06.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_39_G06_A007 5', mRNA sequence
Length = 681
Score = 850 bits (429), Expect = 0.0
Identities = 507/531 (95%), Gaps = 4/531 (0%)
Strand = Plus / Plus
Query: 36 ttccttccccagctccgcaggctgctcatcgccctccctccgcgcc---cccgatccaga 92
||||||||||| |||||||||||||||||||||||| | ||||||| | || || ||
Sbjct: 35 ttccttccccaactccgcaggctgctcatcgccctcaccccgcgccggacgcgcccc-ga 93
Query: 93 tccagatccaggggcttgtcatggcatccaaacgtatcctcaaggaattaaaggacttgc 152
||||||||||||||||| |||||||||| || ||||||||||||||||| |||||| |||
Sbjct: 94 tccagatccaggggcttatcatggcatcaaagcgtatcctcaaggaattgaaggacctgc 153
Query: 153 aaaaggaccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccactggc 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aaaaggaccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccactggc 213
Query: 213 aggcaaccatcatgggtcctcctgatagtccatatgctggaggtgttttcttggtgaaca 272
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 214 aggcaaccatcatgggtcctcctgatagtccatatgctggaggtgttttcttagtgaaca 273
Query: 273 ttcatttcccgccagactaccccttcaagcctccaaaggtatcttttaagacgaaggtct 332
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 ttcatttccccccggactaccccttcaagcctccaaaggtatcttttaagacgaaggtct 333
Query: 333 tccatccaaacatcaatagtaatggaagcatatgtcttgacattcttaaggagcagtgga 392
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 334 tccatccaaacatcaatagtaatggaagcatatgtctcgacattcttaaggagcagtgga 393
Query: 393 gccctgctttgacaatctctaaggttttgctttctatctgctccctgcttactgatccca 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 gccctgctttgacaatctctaaggttttgctttctatctgctccctgcttactgatccca 453
Query: 453 acccagacgaccctcttgtccctgagattgctcacatgtacaagacggatcggcctaagt 512
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 454 acccagatgaccctcttgtccctgagattgctcacatgtacaagacggaccggcctaagt 513
Query: 513 acgaggcgacagcccgcagctggacccagaagtacgccatgggatgaaatg 563
| |||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 514 atgaggcgacagcccgcagctggacccagaagtatgctatgggatgaaatg 564
Score = 71.9 bits (36), Expect = 9e-011
Identities = 63/71 (88%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 579 taaatgcagacgattgtggtgttg--cccatgaaactgttatcggggacgtatgttcttc 636
|||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||
Sbjct: 589 taaatgcagacgattgtggtgttgcccccatgaaactgtttctggggacgaatgttcttc 648
Query: 637 tgttccttgtg 647
|||||||||
Sbjct: 649 cattccttgtg 659
Score = 48.1 bits (24), Expect = 0.001
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 5 gaggccacaggccaccaccattccttcc 32
||||||| ||||||||||||||||||||
Sbjct: 15 gaggccaaaggccaccaccattccttcc 42
>gb|CN152557.1|CN152557 WOUND1_82_G03.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_82_G03_A002 5', mRNA sequence
Length = 776
Score = 842 bits (425), Expect = 0.0
Identities = 507/531 (95%), Gaps = 5/531 (0%)
Strand = Plus / Plus
Query: 36 ttccttccccagctccgcaggctgctcatcgccctccctccgcgcc---cccgatccaga 92
||||||||||| |||||||||||||||||||||||| | ||||||| | || || ||
Sbjct: 10 ttccttcccca-ctccgcaggctgctcatcgccctcaccccgcgccggacgcgcccc-ga 67
Query: 93 tccagatccaggggcttgtcatggcatccaaacgtatcctcaaggaattaaaggacttgc 152
||||||||||||||||| |||||||||| || ||||||||||||||||| |||||| |||
Sbjct: 68 tccagatccaggggcttatcatggcatcaaagcgtatcctcaaggaattgaaggacctgc 127
Query: 153 aaaaggaccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccactggc 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 aaaaggaccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccactggc 187
Query: 213 aggcaaccatcatgggtcctcctgatagtccatatgctggaggtgttttcttggtgaaca 272
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 188 aggcaaccatcatgggtcctcctgatagtccatatgctggaggtgttttcttagtgaaca 247
Query: 273 ttcatttcccgccagactaccccttcaagcctccaaaggtatcttttaagacgaaggtct 332
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ttcatttccccccggactaccccttcaagcctccaaaggtatcttttaagacgaaggtct 307
Query: 333 tccatccaaacatcaatagtaatggaagcatatgtcttgacattcttaaggagcagtgga 392
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 308 tccatccaaacatcaatagtaatggaagcatatgtctcgacattcttaaggagcagtgga 367
Query: 393 gccctgctttgacaatctctaaggttttgctttctatctgctccctgcttactgatccca 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 gccctgctttgacaatctctaaggttttgctttctatctgctccctgcttactgatccca 427
Query: 453 acccagacgaccctcttgtccctgagattgctcacatgtacaagacggatcggcctaagt 512
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 428 acccagatgaccctcttgtccctgagattgctcacatgtacaagacggaccggcctaagt 487
Query: 513 acgaggcgacagcccgcagctggacccagaagtacgccatgggatgaaatg 563
| |||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 488 atgaggcgacagcccgcagctggacccagaagtatgctatgggatgaaatg 538
Score = 143 bits (72), Expect = 3e-032
Identities = 166/194 (85%), Gaps = 15/194 (7%)
Strand = Plus / Plus
Query: 579 taaatgcagacgattgtggtgttgccc--atgaaactgttatcggggacgtatgttcttc 636
||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||
Sbjct: 563 taaatgcagacgattgtggtgttgcccccatgaaactgtttctggggacgaatgttcttc 622
Query: 637 tgttccttgtg---------cattctccgatccatctctaggatccgagttctagtccaa 687
||||||||| ||||||||||||||||| |||||| |||| |||||||||
Sbjct: 623 cattccttgtggcccgtgtgcattctccgatccatct--aggatc-gagtcctagtccaa 679
Query: 688 cattaacctaccattgccttgggtaatgagatgacttgtgcttgctgtggtaactatgct 747
||| |||||||||||||| | | |||||||||||||| ||||||||||| ||||||||||
Sbjct: 680 catcaacctaccattgccgtcgataatgagatgacttatgcttgctgtgataactatgct 739
Query: 748 ag-tgttgatgtta 760
|| |||||||||||
Sbjct: 740 agttgttgatgtta 753
>gb|CX611901.1|CX611901 ANR1_27_H04.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_27_H04_A002 3', mRNA sequence
Length = 724
Score = 842 bits (425), Expect = 0.0
Identities = 506/531 (95%), Gaps = 4/531 (0%)
Strand = Plus / Plus
Query: 36 ttccttccccagctccgcaggctgctcatcgccctccctccgcgcc---cccgatccaga 92
||||||||||| ||||||||| |||||||||||||| | ||||||| | || || ||
Sbjct: 5 ttccttccccaactccgcaggttgctcatcgccctcaccccgcgccggacgcgcccc-ga 63
Query: 93 tccagatccaggggcttgtcatggcatccaaacgtatcctcaaggaattaaaggacttgc 152
||||||||||||||||| |||||||||| || ||||||||||||||||| |||||| |||
Sbjct: 64 tccagatccaggggcttatcatggcatcaaagcgtatcctcaaggaattgaaggacctgc 123
Query: 153 aaaaggaccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccactggc 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 aaaaggaccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccactggc 183
Query: 213 aggcaaccatcatgggtcctcctgatagtccatatgctggaggtgttttcttggtgaaca 272
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 184 aggcaaccatcatgggtcctcctgatagtccatatgctggaggtgttttcttagtgaaca 243
Query: 273 ttcatttcccgccagactaccccttcaagcctccaaaggtatcttttaagacgaaggtct 332
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ttcatttccccccggactaccccttcaagcctccaaaggtatcttttaagacgaaggtct 303
Query: 333 tccatccaaacatcaatagtaatggaagcatatgtcttgacattcttaaggagcagtgga 392
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 304 tccatccaaacatcaatagtaatggaagcatatgtctcgacattcttaaggagcagtgga 363
Query: 393 gccctgctttgacaatctctaaggttttgctttctatctgctccctgcttactgatccca 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gccctgctttgacaatctctaaggttttgctttctatctgctccctgcttactgatccca 423
Query: 453 acccagacgaccctcttgtccctgagattgctcacatgtacaagacggatcggcctaagt 512
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 424 acccagatgaccctcttgtccctgagattgctcacatgtacaagacggaccggcctaagt 483
Query: 513 acgaggcgacagcccgcagctggacccagaagtacgccatgggatgaaatg 563
| |||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 484 atgaggcgacagcccgcagctggacccagaagtatgctatgggatgaaatg 534
Score = 117 bits (59), Expect = 2e-024
Identities = 143/169 (84%), Gaps = 14/169 (8%)
Strand = Plus / Plus
Query: 579 taaatgcagacgattgtggtgttgccc--atgaaactgttatcggggacgtatgttcttc 636
||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||
Sbjct: 559 taaatgcagacgattgtggtgttgcccccatgaaactgtttctggggacgaatgttcttc 618
Query: 637 tgttccttgtg---------cattctccgatccatctctaggatccgagttctagtccaa 687
||||||||| ||||||||||||||||| |||||| |||| |||||||||
Sbjct: 619 cattccttgtggcccgtgtgcattctccgatccatct--aggatc-gagtcctagtccaa 675
Query: 688 cattaacctaccattgccttgggtaatgagatgacttgtgcttgctgtg 736
||| |||||||||||||| | | |||||||||||||| |||||||||||
Sbjct: 676 catcaacctaccattgccgtcgataatgagatgacttatgcttgctgtg 724
>gb|CD432007.1|CD432007 ETH1_12_A01.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_12_A01_A002 5', mRNA sequence
Length = 538
Score = 837 bits (422), Expect = 0.0
Identities = 500/524 (95%), Gaps = 4/524 (0%)
Strand = Plus / Plus
Query: 36 ttccttccccagctccgcaggctgctcatcgccctccctccgcgcc---cccgatccaga 92
||||||||||| |||||||||||||||||||||||| | ||||||| | || || ||
Sbjct: 16 ttccttccccaactccgcaggctgctcatcgccctcaccccgcgccggacgcgcccc-ga 74
Query: 93 tccagatccaggggcttgtcatggcatccaaacgtatcctcaaggaattaaaggacttgc 152
||||||||||||||||| |||||||||| || ||||||||||||||||| |||||| |||
Sbjct: 75 tccagatccaggggcttatcatggcatcaaagcgtatcctcaaggaattgaaggacctgc 134
Query: 153 aaaaggaccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccactggc 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 aaaaggaccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccactggc 194
Query: 213 aggcaaccatcatgggtcctcctgatagtccatatgctggaggtgttttcttggtgaaca 272
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 195 aggcaaccatcatgggtcctcctgatagtccatatgctggaggtgttttcttagtgaaca 254
Query: 273 ttcatttcccgccagactaccccttcaagcctccaaaggtatcttttaagacgaaggtct 332
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ttcatttccccccggactaccccttcaagcctccaaaggtatcttttaagacgaaggtct 314
Query: 333 tccatccaaacatcaatagtaatggaagcatatgtcttgacattcttaaggagcagtgga 392
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 315 tccatccaaacatcaatagtaatggaagcatatgtctcgacattcttaaggagcagtgga 374
Query: 393 gccctgctttgacaatctctaaggttttgctttctatctgctccctgcttactgatccca 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gccctgctttgacaatctctaaggttttgctttctatctgctccctgcttactgatccca 434
Query: 453 acccagacgaccctcttgtccctgagattgctcacatgtacaagacggatcggcctaagt 512
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 435 acccagatgaccctcttgtccctgagattgctcacatgtacaagacggaccggcctaagt 494
Query: 513 acgaggcgacagcccgcagctggacccagaagtacgccatggga 556
| |||||||||||||||||||||||||||||||| || ||||||
Sbjct: 495 atgaggcgacagcccgcagctggacccagaagtatgctatggga 538
Score = 40.1 bits (20), Expect = 0.33
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 aggccaccaccattccttcc 32
||||||||||||||||||||
Sbjct: 4 aggccaccaccattccttcc 23
>gb|CX606873.1|CX606873 ANR1_5_A05.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_5_A05_A002 5', mRNA sequence
Length = 738
Score = 837 bits (422), Expect = 0.0
Identities = 500/524 (95%), Gaps = 4/524 (0%)
Strand = Plus / Plus
Query: 43 cccagctccgcaggctgctcatcgccctccctccgcgcc---cccgatccagatccagat 99
|||| |||||||||||||||||||||||| | ||||||| | || || |||||||||
Sbjct: 7 cccaactccgcaggctgctcatcgccctcaccccgcgccggacgcgcccc-gatccagat 65
Query: 100 ccaggggcttgtcatggcatccaaacgtatcctcaaggaattaaaggacttgcaaaagga 159
|||||||||| |||||||||| || ||||||||||||||||| |||||| ||||||||||
Sbjct: 66 ccaggggcttatcatggcatcaaagcgtatcctcaaggaattgaaggacctgcaaaagga 125
Query: 160 ccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccactggcaggcaac 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 ccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccactggcaggcaac 185
Query: 220 catcatgggtcctcctgatagtccatatgctggaggtgttttcttggtgaacattcattt 279
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 186 catcatgggtcctcctgatagtccatatgctggaggtgttttcttagtgaacattcattt 245
Query: 280 cccgccagactaccccttcaagcctccaaaggtatcttttaagacgaaggtcttccatcc 339
||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ccccccggactaccccttcaagcctccaaaggtatcttttaagacgaaggtcttccatcc 305
Query: 340 aaacatcaatagtaatggaagcatatgtcttgacattcttaaggagcagtggagccctgc 399
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 306 aaacatcaatagtaatggaagcatatgtctcgacattcttaaggagcagtggagccctgc 365
Query: 400 tttgacaatctctaaggttttgctttctatctgctccctgcttactgatcccaacccaga 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tttgacaatctctaaggttttgctttctatctgctccctgcttactgatcccaacccaga 425
Query: 460 cgaccctcttgtccctgagattgctcacatgtacaagacggatcggcctaagtacgaggc 519
||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 426 tgaccctcttgtccctgagattgctcacatgtacaagacggaccggcctaagtatgaggc 485
Query: 520 gacagcccgcagctggacccagaagtacgccatgggatgaaatg 563
||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 486 gacagcccgcagctggacccagaagtatgctatgggatgaaatg 529
Score = 111 bits (56), Expect = 1e-022
Identities = 142/169 (84%), Gaps = 14/169 (8%)
Strand = Plus / Plus
Query: 579 taaatgcagacgattgtggtgttgccc--atgaaactgttatcggggacgtatgttcttc 636
||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||
Sbjct: 554 taaatgcagacgattgtggtgttgcccccatgaaactgtttctggggacgaatgttcttc 613
Query: 637 tgttccttgtg---------cattctccgatccatctctaggatccgagttctagtccaa 687
||||||||| ||||||||||||||||| |||||| |||| |||||||||
Sbjct: 614 cattccttgtggcccgtgtgcattctccgatccatct--aggatc-gagtcctagtccaa 670
Query: 688 cattaacctaccattgccttgggtaatgagatgacttgtgcttgctgtg 736
||| |||||||||||||| | | | |||||||||||| |||||||||||
Sbjct: 671 catcaacctaccattgccgtcgatnatgagatgacttatgcttgctgtg 719
>gb|AW745063.1|AW745063 LG1_386_C08.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 555
Score = 835 bits (421), Expect = 0.0
Identities = 496/519 (95%), Gaps = 4/519 (0%)
Strand = Plus / Plus
Query: 48 ctccgcaggctgctcatcgccctccctccgcgcc---cccgatccagatccagatccagg 104
|||||||||||||||||||||||| | ||||||| | || || ||||||||||||||
Sbjct: 10 ctccgcaggctgctcatcgccctcaccccgcgccggacgcgcccc-gatccagatccagg 68
Query: 105 ggcttgtcatggcatccaaacgtatcctcaaggaattaaaggacttgcaaaaggaccctc 164
||||| |||||||||| || ||||||||||||||||| |||||| |||||||||||||||
Sbjct: 69 ggcttatcatggcatcaaagcgtatcctcaaggaattgaaggacctgcaaaaggaccctc 128
Query: 165 caacatcatgcagtgcaggtcctgctggtgaggatatgttccactggcaggcaaccatca 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 caacatcatgcagtgcaggtcctgctggtgaggatatgttccactggcaggcaaccatca 188
Query: 225 tgggtcctcctgatagtccatatgctggaggtgttttcttggtgaacattcatttcccgc 284
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 189 tgggtcctcctgatagtccatatgctggaggtgttttcttagtgaacattcatttccccc 248
Query: 285 cagactaccccttcaagcctccaaaggtatcttttaagacgaaggtcttccatccaaaca 344
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 cggactaccccttcaagcctccaaaggtatcttttaagacgaaggtcttccatccaaaca 308
Query: 345 tcaatagtaatggaagcatatgtcttgacattcttaaggagcagtggagccctgctttga 404
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 309 tcaatagtaatggaagcatatgtctcgacattcttaaggagcagtggagccctgctttga 368
Query: 405 caatctctaaggttttgctttctatctgctccctgcttactgatcccaacccagacgacc 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 369 caatctctaaggttttgctttctatctgctccctgcttactgatcccaacccagatgacc 428
Query: 465 ctcttgtccctgagattgctcacatgtacaagacggatcggcctaagtacgaggcgacag 524
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 429 ctcttgtccctgagattgctcacatgtacaagacggaccggcctaagtatgaggcgacag 488
Query: 525 cccgcagctggacccagaagtacgccatgggatgaaatg 563
|||||||||||||||||||||| || |||||||||||||
Sbjct: 489 cccgcagctggacccagaagtatgctatgggatgaaatg 527
>gb|BE367620.1|BE367620 PI1_9_A07.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 556
Score = 831 bits (419), Expect = 0.0
Identities = 494/517 (95%), Gaps = 4/517 (0%)
Strand = Plus / Plus
Query: 50 ccgcaggctgctcatcgccctccctccgcgcc---cccgatccagatccagatccagggg 106
|||||||||||||||||||||| | ||||||| | || || ||||||||||||||||
Sbjct: 9 ccgcaggctgctcatcgccctcaccccgcgccggacgcgcccc-gatccagatccagggg 67
Query: 107 cttgtcatggcatccaaacgtatcctcaaggaattaaaggacttgcaaaaggaccctcca 166
||| |||||||||| || ||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 68 cttatcatggcatcaaagcgtatcctcaaggaattgaaggacctgcaaaaggaccctcca 127
Query: 167 acatcatgcagtgcaggtcctgctggtgaggatatgttccactggcaggcaaccatcatg 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 acatcatgcagtgcaggtcctgctggtgaggatatgttccactggcaggcaaccatcatg 187
Query: 227 ggtcctcctgatagtccatatgctggaggtgttttcttggtgaacattcatttcccgcca 286
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 188 ggtcctcctgatagtccatatgctggaggtgttttcttagtgaacattcatttccccccg 247
Query: 287 gactaccccttcaagcctccaaaggtatcttttaagacgaaggtcttccatccaaacatc 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 gactaccccttcaagcctccaaaggtatcttttaagacgaaggtcttccatccaaacatc 307
Query: 347 aatagtaatggaagcatatgtcttgacattcttaaggagcagtggagccctgctttgaca 406
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 308 aatagtaatggaagcatatgtctcgacattcttaaggagcagtggagccctgctttgaca 367
Query: 407 atctctaaggttttgctttctatctgctccctgcttactgatcccaacccagacgaccct 466
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 368 atctctaaggttttgctttctatctgctccctgcttactgatcccaacccagatgaccct 427
Query: 467 cttgtccctgagattgctcacatgtacaagacggatcggcctaagtacgaggcgacagcc 526
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 428 cttgtccctgagattgctcacatgtacaagacggaccggcctaagtatgaggcgacagcc 487
Query: 527 cgcagctggacccagaagtacgccatgggatgaaatg 563
|||||||||||||||||||| || |||||||||||||
Sbjct: 488 cgcagctggacccagaagtatgctatgggatgaaatg 524
>gb|CX611989.1|CX611989 ANR1_27_H04.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_27_H04_A002 5', mRNA sequence
Length = 736
Score = 829 bits (418), Expect = 0.0
Identities = 499/524 (95%), Gaps = 4/524 (0%)
Strand = Plus / Plus
Query: 43 cccagctccgcaggctgctcatcgccctccctccgcgcc---cccgatccagatccagat 99
|||| |||||||||||||||||||||||| | ||||||| | || || |||||||||
Sbjct: 6 cccaactccgcaggctgctcatcgccctcaccccgcgccggacgcgcccc-gatccagat 64
Query: 100 ccaggggcttgtcatggcatccaaacgtatcctcaaggaattaaaggacttgcaaaagga 159
|||||||||| |||||||||| || ||||||||||||||||| |||||| ||||||||||
Sbjct: 65 ccaggggcttatcatggcatcaaagcgtatcctcaaggaattgaaggacctgcaaaagga 124
Query: 160 ccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccactggcaggcaac 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccactggcaggcaac 184
Query: 220 catcatgggtcctcctgatagtccatatgctggaggtgttttcttggtgaacattcattt 279
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 185 catcatgggtcctcctgatagtccatatgctggaggtgttttcttagtgaacattcattt 244
Query: 280 cccgccagactaccccttcaagcctccaaaggtatcttttaagacgaaggtcttccatcc 339
||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ccccccggactaccccttcaagcctccaaaggtatcttttaagacgaaggtcttccatcc 304
Query: 340 aaacatcaatagtaatggaagcatatgtcttgacattcttaaggagcagtggagccctgc 399
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 305 gaacatcaatagtaatggaagcatatgtctcgacattcttaaggagcagtggagccctgc 364
Query: 400 tttgacaatctctaaggttttgctttctatctgctccctgcttactgatcccaacccaga 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tttgacaatctctaaggttttgctttctatctgctccctgcttactgatcccaacccaga 424
Query: 460 cgaccctcttgtccctgagattgctcacatgtacaagacggatcggcctaagtacgaggc 519
||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 425 tgaccctcttgtccctgagattgctcacatgtacaagacggaccggcctaagtatgaggc 484
Query: 520 gacagcccgcagctggacccagaagtacgccatgggatgaaatg 563
||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 485 gacagcccgcagctggacccagaagtatgctatgggatgaaatg 528
Score = 109 bits (55), Expect = 4e-022
Identities = 142/169 (84%), Gaps = 14/169 (8%)
Strand = Plus / Plus
Query: 579 taaatgcagacgattgtggtgttgccc--atgaaactgttatcggggacgtatgttcttc 636
||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||
Sbjct: 553 taaatgcagacgattgtggtgttgcccccatgaaactgtttctggggacgaatgttcttc 612
Query: 637 tgttccttgtg---------cattctccgatccatctctaggatccgagttctagtccaa 687
||||||||| ||||||||||||||||| |||||| |||| |||||| ||
Sbjct: 613 cattccttgtggcccgtgtgcattctccgatccatct--aggatc-gagtcctagtctaa 669
Query: 688 cattaacctaccattgccttgggtaatgagatgacttgtgcttgctgtg 736
||| |||||||||||||| | | |||||||||||||| |||||||||||
Sbjct: 670 catcaacctaccattgccgtcgataatgagatgacttatgcttgctgtg 718
>gb|BE367055.1|BE367055 PI1_42_F01.g2_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 516
Score = 827 bits (417), Expect = 0.0
Identities = 459/473 (97%)
Strand = Plus / Plus
Query: 91 gatccagatccaggggcttgtcatggcatccaaacgtatcctcaaggaattaaaggactt 150
||||||||||||||||||| |||||||||| || ||||||||||||||||| |||||| |
Sbjct: 21 gatccagatccaggggcttatcatggcatcaaagcgtatcctcaaggaattgaaggacct 80
Query: 151 gcaaaaggaccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccactg 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 gcaaaaggaccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccactg 140
Query: 211 gcaggcaaccatcatgggtcctcctgatagtccatatgctggaggtgttttcttggtgaa 270
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 141 gcaggcaaccatcatgggtcctcctgatagtccatatgctggaggtgttttcttagtgaa 200
Query: 271 cattcatttcccgccagactaccccttcaagcctccaaaggtatcttttaagacgaaggt 330
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cattcatttccccccggactaccccttcaagcctccaaaggtatcttttaagacgaaggt 260
Query: 331 cttccatccaaacatcaatagtaatggaagcatatgtcttgacattcttaaggagcagtg 390
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 261 cttccatccaaacatcaatagtaatggaagcatatgtctcgacattcttaaggagcagtg 320
Query: 391 gagccctgctttgacaatctctaaggttttgctttctatctgctccctgcttactgatcc 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagccctgctttgacaatctctaaggttttgctttctatctgctccctgcttactgatcc 380
Query: 451 caacccagacgaccctcttgtccctgagattgctcacatgtacaagacggatcggcctaa 510
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 381 caacccagatgaccctcttgtccctgagattgctcacatgtacaagacggaccggcctaa 440
Query: 511 gtacgaggcgacagcccgcagctggacccagaagtacgccatgggatgaaatg 563
||| |||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 441 gtatgaggcgacagcccgcagctggacccagaagtatgctatgggatgaaatg 493
>gb|CN152474.1|CN152474 WOUND1_82_G03.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_82_G03_A002 3', mRNA sequence
Length = 708
Score = 827 bits (417), Expect = 0.0
Identities = 459/473 (97%)
Strand = Plus / Plus
Query: 91 gatccagatccaggggcttgtcatggcatccaaacgtatcctcaaggaattaaaggactt 150
||||||||||||||||||| |||||||||| || ||||||||||||||||| |||||| |
Sbjct: 25 gatccagatccaggggcttatcatggcatcaaagcgtatcctcaaggaattgaaggacct 84
Query: 151 gcaaaaggaccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccactg 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 gcaaaaggaccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccactg 144
Query: 211 gcaggcaaccatcatgggtcctcctgatagtccatatgctggaggtgttttcttggtgaa 270
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 145 gcaggcaaccatcatgggtcctcctgatagtccatatgctggaggtgttttcttagtgaa 204
Query: 271 cattcatttcccgccagactaccccttcaagcctccaaaggtatcttttaagacgaaggt 330
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 cattcatttccccccggactaccccttcaagcctccaaaggtatcttttaagacgaaggt 264
Query: 331 cttccatccaaacatcaatagtaatggaagcatatgtcttgacattcttaaggagcagtg 390
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 265 cttccatccaaacatcaatagtaatggaagcatatgtctcgacattcttaaggagcagtg 324
Query: 391 gagccctgctttgacaatctctaaggttttgctttctatctgctccctgcttactgatcc 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gagccctgctttgacaatctctaaggttttgctttctatctgctccctgcttactgatcc 384
Query: 451 caacccagacgaccctcttgtccctgagattgctcacatgtacaagacggatcggcctaa 510
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 385 caacccagatgaccctcttgtccctgagattgctcacatgtacaagacggaccggcctaa 444
Query: 511 gtacgaggcgacagcccgcagctggacccagaagtacgccatgggatgaaatg 563
||| |||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 445 gtatgaggcgacagcccgcagctggacccagaagtatgctatgggatgaaatg 497
Score = 137 bits (69), Expect = 2e-030
Identities = 156/183 (85%), Gaps = 14/183 (7%)
Strand = Plus / Plus
Query: 579 taaatgcagacgattgtggtgttgccc--atgaaactgttatcggggacgtatgttcttc 636
||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||
Sbjct: 522 taaatgcagacgattgtggtgttgcccccatgaaactgtttctggggacgaatgttcttc 581
Query: 637 tgttccttgtg---------cattctccgatccatctctaggatccgagttctagtccaa 687
||||||||| ||||||||||||||||| |||||| |||| |||||||||
Sbjct: 582 cattccttgtggcccgtgtgcattctccgatccatct--aggatc-gagtcctagtccaa 638
Query: 688 cattaacctaccattgccttgggtaatgagatgacttgtgcttgctgtggtaactatgct 747
||| |||||||||||||| | | |||||||||||||| ||||||||||| ||||||||||
Sbjct: 639 catcaacctaccattgccgtcgataatgagatgacttatgcttgctgtgataactatgct 698
Query: 748 agt 750
|||
Sbjct: 699 agt 701
>gb|CX606782.1|CX606782 ANR1_5_A05.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_5_A05_A002 3', mRNA sequence
Length = 690
Score = 827 bits (417), Expect = 0.0
Identities = 459/473 (97%)
Strand = Plus / Plus
Query: 91 gatccagatccaggggcttgtcatggcatccaaacgtatcctcaaggaattaaaggactt 150
||||||||||||||||||| |||||||||| || ||||||||||||||||| |||||| |
Sbjct: 29 gatccagatccaggggcttatcatggcatcaaagcgtatcctcaaggaattgaaggacct 88
Query: 151 gcaaaaggaccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccactg 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 gcaaaaggaccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccactg 148
Query: 211 gcaggcaaccatcatgggtcctcctgatagtccatatgctggaggtgttttcttggtgaa 270
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 149 gcaggcaaccatcatgggtcctcctgatagtccatatgctggaggtgttttcttagtgaa 208
Query: 271 cattcatttcccgccagactaccccttcaagcctccaaaggtatcttttaagacgaaggt 330
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 cattcatttccccccggactaccccttcaagcctccaaaggtatcttttaagacgaaggt 268
Query: 331 cttccatccaaacatcaatagtaatggaagcatatgtcttgacattcttaaggagcagtg 390
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 269 cttccatccaaacatcaatagtaatggaagcatatgtctcgacattcttaaggagcagtg 328
Query: 391 gagccctgctttgacaatctctaaggttttgctttctatctgctccctgcttactgatcc 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gagccctgctttgacaatctctaaggttttgctttctatctgctccctgcttactgatcc 388
Query: 451 caacccagacgaccctcttgtccctgagattgctcacatgtacaagacggatcggcctaa 510
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 389 caacccagatgaccctcttgtccctgagattgctcacatgtacaagacggaccggcctaa 448
Query: 511 gtacgaggcgacagcccgcagctggacccagaagtacgccatgggatgaaatg 563
||| |||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 449 gtatgaggcgacagcccgcagctggacccagaagtatgctatgggatgaaatg 501
Score = 113 bits (57), Expect = 3e-023
Identities = 141/167 (84%), Gaps = 14/167 (8%)
Strand = Plus / Plus
Query: 579 taaatgcagacgattgtggtgttgccc--atgaaactgttatcggggacgtatgttcttc 636
||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||
Sbjct: 526 taaatgcagacgattgtggtgttgcccccatgaaactgtttctggggacgaatgttcttc 585
Query: 637 tgttccttgtg---------cattctccgatccatctctaggatccgagttctagtccaa 687
||||||||| ||||||||||||||||| |||||| |||| |||||||||
Sbjct: 586 cattccttgtggcccgtgtgcattctccgatccatct--aggatc-gagtcctagtccaa 642
Query: 688 cattaacctaccattgccttgggtaatgagatgacttgtgcttgctg 734
||| |||||||||||||| | | |||||||||||||| |||||||||
Sbjct: 643 catcaacctaccattgccgtcgataatgagatgacttatgcttgctg 689
>gb|CN127333.1|CN127333 RHOH1_22_H09.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_22_H09_A002 3', mRNA sequence
Length = 769
Score = 819 bits (413), Expect = 0.0
Identities = 458/473 (96%)
Strand = Plus / Plus
Query: 91 gatccagatccaggggcttgtcatggcatccaaacgtatcctcaaggaattaaaggactt 150
||||||||||||||||||| |||||||||| || |||||||||||||||| |||||| |
Sbjct: 112 gatccagatccaggggcttatcatggcatcaaagcgtatcctcaaggaatcgaaggacct 171
Query: 151 gcaaaaggaccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccactg 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 gcaaaaggaccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccactg 231
Query: 211 gcaggcaaccatcatgggtcctcctgatagtccatatgctggaggtgttttcttggtgaa 270
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 232 gcaggcaaccatcatgggtcctcctgatagtccatatgctggaggtgttttcttagtgaa 291
Query: 271 cattcatttcccgccagactaccccttcaagcctccaaaggtatcttttaagacgaaggt 330
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 cattcatttccccccggactaccccttcaagcctccaaaggtatcttttaagacgaaggt 351
Query: 331 cttccatccaaacatcaatagtaatggaagcatatgtcttgacattcttaaggagcagtg 390
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 352 cttccatccaaacatcaatagtaatggaagcatatgtctcgacattcttaaggagcagtg 411
Query: 391 gagccctgctttgacaatctctaaggttttgctttctatctgctccctgcttactgatcc 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 gagccctgctttgacaatctctaaggttttgctttctatctgctccctgcttactgatcc 471
Query: 451 caacccagacgaccctcttgtccctgagattgctcacatgtacaagacggatcggcctaa 510
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 472 caacccagatgaccctcttgtccctgagattgctcacatgtacaagacggaccggcctaa 531
Query: 511 gtacgaggcgacagcccgcagctggacccagaagtacgccatgggatgaaatg 563
||| |||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 532 gtatgaggcgacagcccgcagctggacccagaagtatgctatgggatgaaatg 584
Score = 107 bits (54), Expect = 2e-021
Identities = 138/164 (84%), Gaps = 14/164 (8%)
Strand = Plus / Plus
Query: 579 taaatgcagacgattgtggtgttgccc--atgaaactgttatcggggacgtatgttcttc 636
||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||
Sbjct: 609 taaatgcagacgattgtggtgttgcccccatgaaactgtttctggggacgaatgttcttc 668
Query: 637 tgttccttgtg---------cattctccgatccatctctaggatccgagttctagtccaa 687
||||||||| ||||||||||||||||| |||||| |||| |||||||||
Sbjct: 669 cattccttgtggcccgtgtgcattctccgatccatct--aggatc-gagtcctagtccaa 725
Query: 688 cattaacctaccattgccttgggtaatgagatgacttgtgcttg 731
||| |||||||||||||| | | |||||||||||||| ||||||
Sbjct: 726 catcaacctaccattgccgtcgataatgagatgacttatgcttg 769
>gb|CF486690.1|CF486690 POL1_39_D12.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_39_D12_A002 3', mRNA sequence
Length = 656
Score = 817 bits (412), Expect = 0.0
Identities = 457/472 (96%)
Strand = Plus / Plus
Query: 92 atccagatccaggggcttgtcatggcatccaaacgtatcctcaaggaattaaaggacttg 151
|||||||||||||||||| |||||||||| || ||||||||||||||||| |||||| ||
Sbjct: 1 atccagatccaggggcttatcatggcatcaaagcgtatcctcaaggaattgaaggacctg 60
Query: 152 caaaaggaccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccactgg 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caaaaggaccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccactgg 120
Query: 212 caggcaaccatcatgggtcctcctgatagtccatatgctggaggtgttttcttggtgaac 271
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 121 caggcaaccatcatgggtcctcctgatagtccatatgctggaggtgttttcttagtgaac 180
Query: 272 attcatttcccgccagactaccccttcaagcctccaaaggtatcttttaagacgaaggtc 331
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attcatttccccccggactaccccttcaagcctccaaaggtatcttttaagacgaaggtc 240
Query: 332 ttccatccaaacatcaatagtaatggaagcatatgtcttgacattcttaaggagcagtgg 391
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 241 ttccatccaaacatcaatagtaatggaagcatatgtctcgacattcttaaggagcagtgg 300
Query: 392 agccctgctttgacaatctctaaggttttgctttctatctgctccctgcttactgatccc 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agccctgctttgacaatctctaaggttttgctttctatctgctccctgcttactgatccc 360
Query: 452 aacccagacgaccctcttgtccctgagattgctcacatgtacaagacggatcggcctaag 511
|||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 361 aacccagatgaccctcttgtccctgagattgctcacatgtacaggacggaccggcctaag 420
Query: 512 tacgaggcgacagcccgcagctggacccagaagtacgccatgggatgaaatg 563
|| |||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 421 tatgaggcgacagcccgcagctggacccagaagtatgctatgggatgaaatg 472
Score = 105 bits (53), Expect = 7e-021
Identities = 137/163 (84%), Gaps = 14/163 (8%)
Strand = Plus / Plus
Query: 579 taaatgcagacgattgtggtgttgccc--atgaaactgttatcggggacgtatgttcttc 636
||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||
Sbjct: 497 taaatgcagacgattgtggtgttgcccccatgaaactgtttctggggacgaatgttcttc 556
Query: 637 tgttccttgtg---------cattctccgatccatctctaggatccgagttctagtccaa 687
||||||||| ||||||||||||||||| |||||| |||| |||||||||
Sbjct: 557 cattccttgtggcccgtgtgcattctccgatccatct--aggatc-gagtcctagtccaa 613
Query: 688 cattaacctaccattgccttgggtaatgagatgacttgtgctt 730
||| |||||||||||||| | | |||||||||||||| |||||
Sbjct: 614 catcaacctaccattgccgtcgataatgagatgacttatgctt 656
>gb|CX607625.1|CX607625 ANR1_29_G03.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_29_G03_A002 5', mRNA sequence
Length = 679
Score = 809 bits (408), Expect = 0.0
Identities = 502/530 (94%), Gaps = 5/530 (0%)
Strand = Plus / Plus
Query: 37 tccttccccagctccgcaggctgctcatcgccctccctccgcgcc---cccgatccagat 93
|||||||||| |||||||||||||||||||||||| | ||||||| | || || |||
Sbjct: 1 tccttcccca-ctccgcaggctgctcatcgccctcaccccgcgccggacgcgcccc-gat 58
Query: 94 ccagatccaggggcttgtcatggcatccaaacgtatcctcaaggaattaaaggacttgca 153
|||||||||||||||| |||||||||| || ||||||||||||||||| |||||| ||||
Sbjct: 59 ccagatccaggggcttatcatggcatcaaagcgtatcctcaaggaattgaaggacctgca 118
Query: 154 aaaggaccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccactggca 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 aaaggaccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccactggca 178
Query: 214 ggcaaccatcatgggtcctcctgatagtccatatgctggaggtgttttcttggtgaacat 273
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 179 ggcaaccatcatgggtcctcctgatagtccatatgctggaggtgttttcttagtgaacat 238
Query: 274 tcatttcccgccagactaccccttcaagcctccaaaggtatcttttaagacgaaggtctt 333
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tcatttccccccggactaccccttcaagcctccaaaggtatcttttaagacgaaggtctt 298
Query: 334 ccatccaaacatcaatagtaatggaagcatatgtcttgacattcttaaggagcagtggag 393
||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 299 ccatccacacatcaatagtaatggaagcatatgtctcgacattcttaaggagcagtggag 358
Query: 394 ccctgctttgacaatctctaaggttttgctttctatctgctccctgcttactgatcccaa 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ccctgctttgacaatctctaaggttttgctttctatctgctccctgcttactgatcccaa 418
Query: 454 cccagacgaccctcttgtccctgagattgctcacatgtacaagacggatcggcctaagta 513
|||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 419 cccatatgaccctcttgtccctgagattgctcacatgtacaagacggaccggcctaagta 478
Query: 514 cgaggcgacagcccgcagctggacccagaagtacgccatgggatgaaatg 563
|| ||||||||||||||||||||||| ||||| || |||||||||||||
Sbjct: 479 tgaagcgacagcccgcagctggacccataagtatgctatgggatgaaatg 528
Score = 71.9 bits (36), Expect = 9e-011
Identities = 63/71 (88%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 579 taaatgcagacgattgtggtgttg--cccatgaaactgttatcggggacgtatgttcttc 636
|||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||
Sbjct: 553 taaatgcagacgattgtggtgttgcccccatgaaactgtttctggggacgaatgttcttc 612
Query: 637 tgttccttgtg 647
|||||||||
Sbjct: 613 cattccttgtg 623
>gb|BG240501.1|BG240501 OV1_30_G09.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 499
Score = 783 bits (395), Expect = 0.0
Identities = 428/439 (97%)
Strand = Plus / Plus
Query: 125 cgtatcctcaaggaattaaaggacttgcaaaaggaccctccaacatcatgcagtgcaggt 184
||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 14 cgtatcctcaaggaattgaaggacctgcaaaaggaccctccaacatcatgcagtgcaggt 73
Query: 185 cctgctggtgaggatatgttccactggcaggcaaccatcatgggtcctcctgatagtcca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 cctgctggtgaggatatgttccactggcaggcaaccatcatgggtcctcctgatagtcca 133
Query: 245 tatgctggaggtgttttcttggtgaacattcatttcccgccagactaccccttcaagcct 304
|||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||
Sbjct: 134 tatgctggaggtgttttcttagtgaacattcatttccccccggactaccccttcaagcct 193
Query: 305 ccaaaggtatcttttaagacgaaggtcttccatccaaacatcaatagtaatggaagcata 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 ccaaaggtatcttttaagacgaaggtcttccatccaaacatcaatagtaatggaagcata 253
Query: 365 tgtcttgacattcttaaggagcagtggagccctgctttgacaatctctaaggttttgctt 424
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tgtctcgacattcttaaggagcagtggagccctgctttgacaatctctaaggttttgctt 313
Query: 425 tctatctgctccctgcttactgatcccaacccagacgaccctcttgtccctgagattgct 484
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 314 tctatctgctccctgcttactgatcccaacccagatgaccctcttgtccctgagattgct 373
Query: 485 cacatgtacaagacggatcggcctaagtacgaggcgacagcccgcagctggacccagaag 544
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 374 cacatgtacaagacggaccggcctaagtatgaggcgacagcccgcagctggacccagaag 433
Query: 545 tacgccatgggatgaaatg 563
|| || |||||||||||||
Sbjct: 434 tatgctatgggatgaaatg 452
Score = 46.1 bits (23), Expect = 0.005
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 579 taaatgcagacgattgtggtgtt 601
|||||||||||||||||||||||
Sbjct: 477 taaatgcagacgattgtggtgtt 499
>gb|BE367626.1|BE367626 PI1_9_A07.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 663
Score = 767 bits (387), Expect = 0.0
Identities = 420/431 (97%)
Strand = Plus / Plus
Query: 133 caaggaattaaaggacttgcaaaaggaccctccaacatcatgcagtgcaggtcctgctgg 192
||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caaggaattgaaggacctgcaaaaggaccctccaacatcatgcagtgcaggtcctgctgg 60
Query: 193 tgaggatatgttccactggcaggcaaccatcatgggtcctcctgatagtccatatgctgg 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgaggatatgttccactggcaggcaaccatcatgggtcctcctgatagtccatatgctgg 120
Query: 253 aggtgttttcttggtgaacattcatttcccgccagactaccccttcaagcctccaaaggt 312
|||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 121 aggtgttttcttagtgaacattcatttccccccggactaccccttcaagcctccaaaggt 180
Query: 313 atcttttaagacgaaggtcttccatccaaacatcaatagtaatggaagcatatgtcttga 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 181 atcttttaagacgaaggtcttccatccaaacatcaatagtaatggaagcatatgtctcga 240
Query: 373 cattcttaaggagcagtggagccctgctttgacaatctctaaggttttgctttctatctg 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cattcttaaggagcagtggagccctgctttgacaatctctaaggttttgctttctatctg 300
Query: 433 ctccctgcttactgatcccaacccagacgaccctcttgtccctgagattgctcacatgta 492
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 301 ctccctgcttactgatcccaacccagatgaccctcttgtccctgagattgctcacatgta 360
Query: 493 caagacggatcggcctaagtacgaggcgacagcccgcagctggacccagaagtacgccat 552
||||||||| ||||||||||| |||||||||||||||||||||||||||||||| || ||
Sbjct: 361 caagacggaccggcctaagtatgaggcgacagcccgcagctggacccagaagtatgctat 420
Query: 553 gggatgaaatg 563
|||||||||||
Sbjct: 421 gggatgaaatg 431
Score = 127 bits (64), Expect = 2e-027
Identities = 164/194 (84%), Gaps = 15/194 (7%)
Strand = Plus / Plus
Query: 579 taaatgcagacgattgtggtgttgccc--atgaaactgttatcggggacgtatgttcttc 636
||||||||||||||||||| |||||| ||||||||||| ||||||| |||||||||
Sbjct: 456 taaatgcagacgattgtggctttgcccccatgaaactgtttctggggacgaatgttcttc 515
Query: 637 tgttccttgtg---------cattctccgatccatctctaggatccgagttctagtccaa 687
||||||||| ||||||||||||||||| |||||| |||| |||||||||
Sbjct: 516 cattccttgtggcccgtgtgcattctccgatccatct--aggatc-gagtcctagtccaa 572
Query: 688 cattaacctaccattgccttgggtaatgagatgacttgtgcttgctgtggtaactatgct 747
||| |||||||||||||| | | |||||||||||||| ||||||||||| ||||||||||
Sbjct: 573 catcaacctaccattgccgtcgataatgagatgacttatgcttgctgtgataactatgct 632
Query: 748 ag-tgttgatgtta 760
|| |||||||||||
Sbjct: 633 agttgttgatgtta 646
>gb|CD431965.1|CD431965 ETH1_12_A01.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_12_A01_A002 3', mRNA sequence
Length = 568
Score = 763 bits (385), Expect = 0.0
Identities = 418/429 (97%)
Strand = Plus / Plus
Query: 135 aggaattaaaggacttgcaaaaggaccctccaacatcatgcagtgcaggtcctgctggtg 194
||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggaattgaaggacctgcaaaaggaccctccaacatcatgcagtgcaggtcctgctggtg 60
Query: 195 aggatatgttccactggcaggcaaccatcatgggtcctcctgatagtccatatgctggag 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggatatgttccactggcaggcaaccatcatgggtcctcctgatagtccatatgctggag 120
Query: 255 gtgttttcttggtgaacattcatttcccgccagactaccccttcaagcctccaaaggtat 314
|||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 121 gtgttttcttagtgaacattcatttccccccggactaccccttcaagcctccaaaggtat 180
Query: 315 cttttaagacgaaggtcttccatccaaacatcaatagtaatggaagcatatgtcttgaca 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 181 cttttaagacgaaggtcttccatccaaacatcaatagtaatggaagcatatgtctcgaca 240
Query: 375 ttcttaaggagcagtggagccctgctttgacaatctctaaggttttgctttctatctgct 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttcttaaggagcagtggagccctgctttgacaatctctaaggttttgctttctatctgct 300
Query: 435 ccctgcttactgatcccaacccagacgaccctcttgtccctgagattgctcacatgtaca 494
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 301 ccctgcttactgatcccaacccagatgaccctcttgtccctgagattgctcacatgtaca 360
Query: 495 agacggatcggcctaagtacgaggcgacagcccgcagctggacccagaagtacgccatgg 554
||||||| ||||||||||| |||||||||||||||||||||||||||||||| || ||||
Sbjct: 361 agacggaccggcctaagtatgaggcgacagcccgcagctggacccagaagtatgctatgg 420
Query: 555 gatgaaatg 563
|||||||||
Sbjct: 421 gatgaaatg 429
Score = 71.9 bits (36), Expect = 9e-011
Identities = 63/71 (88%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 579 taaatgcagacgattgtggtgttg--cccatgaaactgttatcggggacgtatgttcttc 636
|||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||
Sbjct: 454 taaatgcagacgattgtggtgttgcccccatgaaactgtttctggggacgaatgttcttc 513
Query: 637 tgttccttgtg 647
|||||||||
Sbjct: 514 cattccttgtg 524
>gb|BG239925.1|BG239925 OV1_30_G09.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 574
Score = 728 bits (367), Expect = 0.0
Identities = 396/406 (97%)
Strand = Plus / Plus
Query: 158 gaccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccactggcaggca 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccactggcaggca 60
Query: 218 accatcatgggtcctcctgatagtccatatgctggaggtgttttcttggtgaacattcat 277
|||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 61 accatcatgggtcctcntgatagtccatatgctggaggtgttttcttagtgaacattcat 120
Query: 278 ttcccgccagactaccccttcaagcctccaaaggtatcttttaagacgaaggtcttccat 337
||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttccccccggactaccccttcaagcctccaaaggtatcttttaagacgaaggtcttccat 180
Query: 338 ccaaacatcaatagtaatggaagcatatgtcttgacattcttaaggagcagtggagccct 397
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 181 ccaaacatcaatagtaatggaagcatatgtctcgacattcttaaggagcagtggagccct 240
Query: 398 gctttgacaatctctaaggttttgctttctatctgctccctgcttactgatcccaaccca 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gctttgacaatctctaaggttttgctttctatctgctccctgcttactgatcccaaccca 300
Query: 458 gacgaccctcttgtccctgagattgctcacatgtacaagacggatcggcctaagtacgag 517
|| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 301 gatgaccctcttgtccctgagattgctcacatgtacaagacggaccggcctaagtatgag 360
Query: 518 gcgacagcccgcagctggacccagaagtacgccatgggatgaaatg 563
||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 361 gcgacagcccgcagctggacccagaagtatgctatgggatgaaatg 406
Score = 71.9 bits (36), Expect = 9e-011
Identities = 63/71 (88%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 579 taaatgcagacgattgtggtgttg--cccatgaaactgttatcggggacgtatgttcttc 636
|||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||
Sbjct: 431 taaatgcagacgattgtggtgttgcccccatgaaactgtttctggggacgaatgttcttc 490
Query: 637 tgttccttgtg 647
|||||||||
Sbjct: 491 cattccttgtg 501
Score = 52.0 bits (26), Expect = 9e-005
Identities = 39/42 (92%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 664 tctaggatccgagttctagtccaacattaacctaccattgcc 705
||||||||| |||| |||||||||||| ||||||||||||||
Sbjct: 526 tctaggatc-gagtcctagtccaacatcaacctaccattgcc 566
>gb|CN127420.1|CN127420 RHOH1_22_H09.g3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_22_H09_A002 5', mRNA sequence
Length = 671
Score = 728 bits (367), Expect = 0.0
Identities = 415/431 (96%)
Strand = Plus / Plus
Query: 91 gatccagatccaggggcttgtcatggcatccaaacgtatcctcaaggaattaaaggactt 150
||||||||||||||||||| |||||||||| || |||||||||||||||| |||||| |
Sbjct: 241 gatccagatccaggggcttatcatggcatcaaagcgtatcctcaaggaatcgaaggacct 300
Query: 151 gcaaaaggaccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccactg 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcaaaaggaccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccactg 360
Query: 211 gcaggcaaccatcatgggtcctcctgatagtccatatgctggaggtgttttcttggtgaa 270
|||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 361 gcaggcaagcatcatgggtcctcctgatagtccatatgctggaggtgttttcttagtgaa 420
Query: 271 cattcatttcccgccagactaccccttcaagcctccaaaggtatcttttaagacgaaggt 330
|||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 421 cattcatttccccccggactaccccttcaagcctccaaaggtatcttttgggacgaaggt 480
Query: 331 cttccatccaaacatcaatagtaatggaagcatatgtcttgacattcttaaggagcagtg 390
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 481 cttccatccaaacatcaatagtaatggaagcatatgtctcgacattcttaaggagcagtg 540
Query: 391 gagccctgctttgacaatctctaaggttttgctttctatctgctccctgcttactgatcc 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gagccctgctttgacaatctctaaggttttgctttctatctgctccctgcttactgatcc 600
Query: 451 caacccagacgaccctcttgtccctgagattgctcacatgtacaagacggatcggcctaa 510
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 601 caacccagatgaccctcttgtccctgagattgctcacatgtacaagacggaccggcctaa 660
Query: 511 gtacgaggcga 521
||| |||||||
Sbjct: 661 gtatgaggcga 671
>gb|BG048734.1|BG048734 OV1_22_C12.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 500
Score = 644 bits (325), Expect = 0.0
Identities = 394/415 (94%), Gaps = 4/415 (0%)
Strand = Plus / Plus
Query: 36 ttccttccccagctccgcaggctgctcatcgccctccctccgcgcc---cccgatccaga 92
||||||||||| |||||||||||||||||||||||| | ||||||| | || || ||
Sbjct: 87 ttccttccccaactccgcaggctgctcatcgccctcaccccgcgccggacgcgcccc-ga 145
Query: 93 tccagatccaggggcttgtcatggcatccaaacgtatcctcaaggaattaaaggacttgc 152
|||| |||||||||||| |||||||||| || ||||||||||||||||| |||||| |||
Sbjct: 146 tccacatccaggggcttatcatggcatcaaagcgtatcctcaaggaattgaaggacctgc 205
Query: 153 aaaaggaccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccactggc 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 aaaaggaccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccactggc 265
Query: 213 aggcaaccatcatgggtcctcctgatagtccatatgctggaggtgttttcttggtgaaca 272
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 266 aggcaaccatcatgggtcctcctgatagtccatatgctggaggtgttttcttagtgaaca 325
Query: 273 ttcatttcccgccagactaccccttcaagcctccaaaggtatcttttaagacgaaggtct 332
|||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 326 ttcatttccccccggactaccccttcaagcctccaaaggtatcttttaagacaaaggtct 385
Query: 333 tccatccaaacatcaatagtaatggaagcatatgtcttgacattcttaaggagcagtgga 392
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 386 tccatccaaacatcaatagtaatggaagcatatgtctcgacattcttaaggagcagtgga 445
Query: 393 gccctgctttgacaatctctaaggttttgctttctatctgctccctgcttactga 447
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gccctgctttgacaatctctaaggttttgctttctatctgctccctgcttactga 500
Score = 48.1 bits (24), Expect = 0.001
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 5 gaggccacaggccaccaccattccttcc 32
||||||| ||||||||||||||||||||
Sbjct: 67 gaggccaaaggccaccaccattccttcc 94
>gb|CF073159.1|CF073159 FE1_28_D08.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_28_D08_A002 3', mRNA sequence
Length = 558
Score = 597 bits (301), Expect = e-169
Identities = 328/337 (97%)
Strand = Plus / Plus
Query: 227 ggtcctcctgatagtccatatgctggaggtgttttcttggtgaacattcatttcccgcca 286
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 1 ggtcctcctgatagtccatatgctggaggtgttttcttagtgaacattcatttccccccg 60
Query: 287 gactaccccttcaagcctccaaaggtatcttttaagacgaaggtcttccatccaaacatc 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gactaccccttcaagcctccaaaggtatcttttaagacgaaggtcttccatccaaacatc 120
Query: 347 aatagtaatggaagcatatgtcttgacattcttaaggagcagtggagccctgctttgaca 406
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 121 aatagtaatggaagcatatgtctcgacattcttaaggagcagtggagccctgctttgaca 180
Query: 407 atctctaaggttttgctttctatctgctccctgcttactgatcccaacccagacgaccct 466
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 181 atctctaaggttttgctttctatctgctccctgcttactgatcccaacccagatgaccct 240
Query: 467 cttgtccctgagattgctcacatgtacaagacggatcggcctaagtacgaggcgacagcc 526
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 241 cttgtccctgagattgctcacatgtacaagacggaccggcctaagtatgaggcgacagcc 300
Query: 527 cgcagctggacccagaagtacgccatgggatgaaatg 563
|||||||||||||||||||| || |||||||||||||
Sbjct: 301 cgcagctggacccagaagtatgctatgggatgaaatg 337
Score = 143 bits (72), Expect = 3e-032
Identities = 166/194 (85%), Gaps = 15/194 (7%)
Strand = Plus / Plus
Query: 579 taaatgcagacgattgtggtgttgccc--atgaaactgttatcggggacgtatgttcttc 636
||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||
Sbjct: 362 taaatgcagacgattgtggtgttgcccccatgaaactgtttctggggacgaatgttcttc 421
Query: 637 tgttccttgtg---------cattctccgatccatctctaggatccgagttctagtccaa 687
||||||||| ||||||||||||||||| |||||| |||| |||||||||
Sbjct: 422 cattccttgtggcccgtgtgcattctccgatccatct--aggatc-gagtcctagtccaa 478
Query: 688 cattaacctaccattgccttgggtaatgagatgacttgtgcttgctgtggtaactatgct 747
||| |||||||||||||| | | |||||||||||||| ||||||||||| ||||||||||
Sbjct: 479 catcaacctaccattgccgtcgataatgagatgacttatgcttgctgtgataactatgct 538
Query: 748 ag-tgttgatgtta 760
|| |||||||||||
Sbjct: 539 agttgttgatgtta 552
>gb|BE366997.1|BE366997 PI1_42_F01.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 288
Score = 504 bits (254), Expect = e-141
Identities = 278/286 (97%)
Strand = Plus / Plus
Query: 143 aaggacttgcaaaaggaccctccaacatcatgcagtgcaggtcctgctggtgaggatatg 202
|||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 aaggacatgcaaaaggtccctccaacatcatgcagtgcaggtcctgctggtgaggatatg 62
Query: 203 ttccactggcaggcaaccatcatgggtcctcctgatagtccatatgctggaggtgttttc 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 ttccactggcaggcaaccatcatgggtcctcctgatagtccatatgctggaggtgttttc 122
Query: 263 ttggtgaacattcatttcccgccagactaccccttcaagcctccaaaggtatcttttaag 322
|| ||||||||||||||||| || |||||||||||| |||||||||||||||||||||||
Sbjct: 123 ttagtgaacattcatttccccccggactaccccttcgagcctccaaaggtatcttttaag 182
Query: 323 acgaaggtcttccatccaaacatcaatagtaatggaagcatatgtcttgacattcttaag 382
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 183 acgaaggtcttccatccaaacatcaatagtaatggaagcatatgtctcgacattcttaag 242
Query: 383 gagcagtggagccctgctttgacaatctctaaggttttgctttcta 428
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 cagcagtggagccctgctttgacaatctctaaggttttgctttcta 288
>gb|BG049039.1|BG049039 OV1_22_D12.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 498
Score = 426 bits (215), Expect = e-117
Identities = 233/239 (97%)
Strand = Plus / Plus
Query: 325 gaaggtcttccatccaaacatcaatagtaatggaagcatatgtcttgacattcttaagga 384
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 93 gaaggtcttccatccaaacatcaatagtaatggaagcatatgtctcgacattcttaagga 152
Query: 385 gcagtggagccctgctttgacaatctctaaggttttgctttctatctgctccctgcttac 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 gcagtggagccctgctttgacaatctctaaggttttgctttctatctgctccctgcttac 212
Query: 445 tgatcccaacccagacgaccctcttgtccctgagattgctcacatgtacaagacggatcg 504
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 213 tgatcccaacccagatgaccctcttgtccctgagattgctcacatgtacaagacggaccg 272
Query: 505 gcctaagtacgaggcgacagcccgcagctggacccagaagtacgccatgggatgaaatg 563
||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 273 gcctaagtatgaggcgacagcccgcagctggacccagaagtatgctatgggatgaaatg 331
Score = 87.7 bits (44), Expect = 2e-015
Identities = 116/138 (84%), Gaps = 14/138 (10%)
Strand = Plus / Plus
Query: 579 taaatgcagacgattgtggtgttg--cccatgaaactgttatcggggacgtatgttcttc 636
|||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||
Sbjct: 356 taaatgcagacgattgtggtgttgcccccatgaaactgtttctggggacgaatgttcttc 415
Query: 637 tgttcct---------tgtgcattctccgatccatctctaggatccgagttctagtccaa 687
||||| |||||||||||||||||| |||||||| ||||| |||||||||
Sbjct: 416 cattccttgtggcccgtgtgcattctccgatcca--tctaggat-cgagtcctagtccaa 472
Query: 688 cattaacctaccattgcc 705
||| ||||||||||||||
Sbjct: 473 catcaacctaccattgcc 490
>gb|BE599149.1|BE599149 PI1_85_H12.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 607
Score = 412 bits (208), Expect = e-113
Identities = 379/436 (86%)
Strand = Plus / Plus
Query: 108 ttgtcatggcatccaaacgtatcctcaaggaattaaaggacttgcaaaaggaccctccaa 167
||||||||||||| || |||||||||||||| | |||||| |||| || || || || |
Sbjct: 55 ttgtcatggcatcaaagcgtatcctcaaggagctgaaggacctgcagaaagatcccccca 114
Query: 168 catcatgcagtgcaggtcctgctggtgaggatatgttccactggcaggcaaccatcatgg 227
||||||||||||| ||||||||||||||||| ||||| || ||||| ||||| || ||||
Sbjct: 115 catcatgcagtgccggtcctgctggtgaggacatgtttcattggcaagcaacaattatgg 174
Query: 228 gtcctcctgatagtccatatgctggaggtgttttcttggtgaacattcatttcccgccag 287
| || ||||| ||||| |||||||| ||||||||||| |||||||||||||||||||| |
Sbjct: 175 gaccacctgacagtccctatgctggcggtgttttcttagtgaacattcatttcccgccgg 234
Query: 288 actaccccttcaagcctccaaaggtatcttttaagacgaaggtcttccatccaaacatca 347
| ||||||||||| ||||||||||| ||||| ||||| |||||||||||||| || ||||
Sbjct: 235 attaccccttcaaacctccaaaggtttctttcaagacaaaggtcttccatcctaatatca 294
Query: 348 atagtaatggaagcatatgtcttgacattcttaaggagcagtggagccctgctttgacaa 407
| || |||||||| ||||| ||||||||||| || |||||||||||||||||||||||||
Sbjct: 295 acagcaatggaagtatatgccttgacattctcaaagagcagtggagccctgctttgacaa 354
Query: 408 tctctaaggttttgctttctatctgctccctgcttactgatcccaacccagacgaccctc 467
| |||||||| |||| || ||||| |||||| | ||||| |||||||| ||||||||||
Sbjct: 355 tttctaaggtcctgctctccatctgttccctgttgactgaccccaacccggacgaccctc 414
Query: 468 ttgtccctgagattgctcacatgtacaagacggatcggcctaagtacgaggcgacagccc 527
|||||||||||||||| ||||||||||||||||| ||||| || || ||| | ||||| |
Sbjct: 415 ttgtccctgagattgcccacatgtacaagacggaccggccgaaatatgagtcaacagctc 474
Query: 528 gcagctggacccagaa 543
|||||||||| |||||
Sbjct: 475 gcagctggacgcagaa 490
>gb|CN141039.1|CN141039 OX1_49_A08.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_49_A08_A002 3', mRNA sequence
Length = 772
Score = 412 bits (208), Expect = e-113
Identities = 379/436 (86%)
Strand = Plus / Plus
Query: 108 ttgtcatggcatccaaacgtatcctcaaggaattaaaggacttgcaaaaggaccctccaa 167
||||||||||||| || |||||||||||||| | |||||| |||| || || || || |
Sbjct: 55 ttgtcatggcatcaaagcgtatcctcaaggagctgaaggacctgcagaaagatcccccca 114
Query: 168 catcatgcagtgcaggtcctgctggtgaggatatgttccactggcaggcaaccatcatgg 227
||||||||||||| ||||||||||||||||| ||||| || ||||| ||||| || ||||
Sbjct: 115 catcatgcagtgccggtcctgctggtgaggacatgtttcattggcaagcaacaattatgg 174
Query: 228 gtcctcctgatagtccatatgctggaggtgttttcttggtgaacattcatttcccgccag 287
| || ||||| ||||| |||||||| ||||||||||| |||||||||||||||||||| |
Sbjct: 175 gaccacctgacagtccctatgctggcggtgttttcttagtgaacattcatttcccgccgg 234
Query: 288 actaccccttcaagcctccaaaggtatcttttaagacgaaggtcttccatccaaacatca 347
| ||||||||||| ||||||||||| ||||| ||||| |||||||||||||| || ||||
Sbjct: 235 attaccccttcaaacctccaaaggtttctttcaagacaaaggtcttccatcctaatatca 294
Query: 348 atagtaatggaagcatatgtcttgacattcttaaggagcagtggagccctgctttgacaa 407
| || |||||||| ||||| ||||||||||| || |||||||||||||||||||||||||
Sbjct: 295 acagcaatggaagtatatgccttgacattctcaaagagcagtggagccctgctttgacaa 354
Query: 408 tctctaaggttttgctttctatctgctccctgcttactgatcccaacccagacgaccctc 467
| |||||||| |||| || ||||| |||||| | ||||| |||||||| ||||||||||
Sbjct: 355 tttctaaggtcctgctctccatctgttccctgttgactgaccccaacccggacgaccctc 414
Query: 468 ttgtccctgagattgctcacatgtacaagacggatcggcctaagtacgaggcgacagccc 527
|||||||||||||||| ||||||||||||||||| ||||| || || ||| | ||||| |
Sbjct: 415 ttgtccctgagattgcccacatgtacaagacggaccggccgaaatatgagtcaacagctc 474
Query: 528 gcagctggacccagaa 543
|||||||||| |||||
Sbjct: 475 gcagctggacgcagaa 490
>gb|CD431369.1|CD431369 ETH1_8_A10.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_8_A10_A002 5', mRNA sequence
Length = 727
Score = 404 bits (204), Expect = e-111
Identities = 378/436 (86%)
Strand = Plus / Plus
Query: 108 ttgtcatggcatccaaacgtatcctcaaggaattaaaggacttgcaaaaggaccctccaa 167
||||||||||||| || |||||||||||||| | |||||| |||| || || || || |
Sbjct: 249 ttgtcatggcatcaaagcgtatcctcaaggagctgaaggacctgcagaaagatcccccca 308
Query: 168 catcatgcagtgcaggtcctgctggtgaggatatgttccactggcaggcaaccatcatgg 227
||||||||| ||| ||||||||||||||||| ||||| || ||||| ||||| || ||||
Sbjct: 309 catcatgcattgccggtcctgctggtgaggacatgtttcattggcaagcaacaattatgg 368
Query: 228 gtcctcctgatagtccatatgctggaggtgttttcttggtgaacattcatttcccgccag 287
| || ||||| ||||| |||||||| ||||||||||| |||||||||||||||||||| |
Sbjct: 369 gaccacctgacagtccctatgctggcggtgttttcttagtgaacattcatttcccgccgg 428
Query: 288 actaccccttcaagcctccaaaggtatcttttaagacgaaggtcttccatccaaacatca 347
| ||||||||||| ||||||||||| ||||| ||||| |||||||||||||| || ||||
Sbjct: 429 attaccccttcaaacctccaaaggtttctttcaagacaaaggtcttccatcctaatatca 488
Query: 348 atagtaatggaagcatatgtcttgacattcttaaggagcagtggagccctgctttgacaa 407
| || |||||||| ||||| ||||||||||| || |||||||||||||||||||||||||
Sbjct: 489 acagcaatggaagtatatgccttgacattctcaaagagcagtggagccctgctttgacaa 548
Query: 408 tctctaaggttttgctttctatctgctccctgcttactgatcccaacccagacgaccctc 467
| |||||||| |||| || ||||| |||||| | ||||| |||||||| ||||||||||
Sbjct: 549 tttctaaggtcctgctctccatctgttccctgttgactgaccccaacccggacgaccctc 608
Query: 468 ttgtccctgagattgctcacatgtacaagacggatcggcctaagtacgaggcgacagccc 527
|||||||||||||||| ||||||||||||||||| ||||| || || ||| | ||||| |
Sbjct: 609 ttgtccctgagattgcccacatgtacaagacggaccggccgaaatatgagtcaacagctc 668
Query: 528 gcagctggacccagaa 543
|||||||||| |||||
Sbjct: 669 gcagctggacgcagaa 684
>gb|CD205394.1|CD205394 HS1_13_A10.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_13_A10_A012 5', mRNA sequence
Length = 641
Score = 385 bits (194), Expect = e-105
Identities = 251/268 (93%), Gaps = 4/268 (1%)
Strand = Plus / Plus
Query: 48 ctccgcaggctgctcatcgccctccctccgcgcc---cccgatccagatccagatccagg 104
|||||||||||||||||||||||| | ||||||| | || || ||||||||||||||
Sbjct: 3 ctccgcaggctgctcatcgccctcaccccgcgccggacgcgcccc-gatccagatccagg 61
Query: 105 ggcttgtcatggcatccaaacgtatcctcaaggaattaaaggacttgcaaaaggaccctc 164
||||| |||||||||| || ||||||||||||||||| |||||| |||||||||||||||
Sbjct: 62 ggcttatcatggcatcaaagcgtatcctcaaggaattgaaggacctgcaaaaggaccctc 121
Query: 165 caacatcatgcagtgcaggtcctgctggtgaggatatgttccactggcaggcaaccatca 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 caacatcatgcagtgcaggtcctgctggtgaggatatgttccactggcaggcaaccatca 181
Query: 225 tgggtcctcctgatagtccatatgctggaggtgttttcttggtgaacattcatttcccgc 284
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 182 tgggtcctcctgatagtccatatgctggaggtgttttcttagtgaacattcatttccccc 241
Query: 285 cagactaccccttcaagcctccaaaggt 312
| ||||||||||||||||||||||||||
Sbjct: 242 cggactaccccttcaagcctccaaaggt 269
>gb|BE597762.1|BE597762 PI1_85_H12.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 566
Score = 343 bits (173), Expect = 2e-092
Identities = 308/353 (87%)
Strand = Plus / Plus
Query: 191 ggtgaggatatgttccactggcaggcaaccatcatgggtcctcctgatagtccatatgct 250
|||||||| ||||| || ||||| ||||| || ||||| || ||||| ||||| ||||||
Sbjct: 1 ggtgaggacatgtttcattggcaagcaacaattatgggaccacctgacagtccctatgct 60
Query: 251 ggaggtgttttcttggtgaacattcatttcccgccagactaccccttcaagcctccaaag 310
|| ||||||||||| |||||||||||||||||||| || ||||||||||| |||||||||
Sbjct: 61 ggcggtgttttcttagtgaacattcatttcccgccggattaccccttcaaacctccaaag 120
Query: 311 gtatcttttaagacgaaggtcttccatccaaacatcaatagtaatggaagcatatgtctt 370
|| ||||| ||||| |||||||||||||| || ||||| || |||||||| ||||| |||
Sbjct: 121 gtttctttcaagacaaaggtcttccatcctaatatcaacagcaatggaagtatatgcctt 180
Query: 371 gacattcttaaggagcagtggagccctgctttgacaatctctaaggttttgctttctatc 430
|||||||| || |||||||||||||||||||||||||| |||||||| |||| || |||
Sbjct: 181 gacattctcaaagagcagtggagccctgctttgacaatttctaaggtcctgctctccatc 240
Query: 431 tgctccctgcttactgatcccaacccagacgaccctcttgtccctgagattgctcacatg 490
|| |||||| | ||||| |||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 241 tgttccctgttgactgaccccaacccggacgaccctcttgtccctgagattgcccacatg 300
Query: 491 tacaagacggatcggcctaagtacgaggcgacagcccgcagctggacccagaa 543
||||||||||| ||||| || || ||| | ||||| ||||||||||| |||||
Sbjct: 301 tacaagacggaccggccgaaatatgagtcaacagctcgcagctggacgcagaa 353
>gb|BF585878.1|BF585878 FM1_25_F06.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 557
Score = 331 bits (167), Expect = 6e-089
Identities = 305/351 (86%)
Strand = Plus / Plus
Query: 193 tgaggatatgttccactggcaggcaaccatcatgggtcctcctgatagtccatatgctgg 252
|||||| ||||| || ||||| ||||| || ||||| || ||||| ||||| ||||||||
Sbjct: 1 tgaggacatgtttcattggcaagcaacaattatgggaccacctgacagtccctatgctgg 60
Query: 253 aggtgttttcttggtgaacattcatttcccgccagactaccccttcaagcctccaaaggt 312
||||||||||| |||||||||||||||||||| || ||||||||||| |||||||||||
Sbjct: 61 cggtgttttcttagtgaacattcatttcccgccggattaccccttcaaacctccaaaggt 120
Query: 313 atcttttaagacgaaggtcttccatccaaacatcaatagtaatggaagcatatgtcttga 372
||||| ||||| |||||||||||||| || ||||| || |||||||| ||||| |||||
Sbjct: 121 ttctttcaagacaaaggtcttccatcctaatatcaacagcaatggaagtatatgccttga 180
Query: 373 cattcttaaggagcagtggagccctgctttgacaatctctaaggttttgctttctatctg 432
|||||| || |||||||||||||||||||||||||| |||||||| |||| || |||||
Sbjct: 181 cattctcaaagagcagtggagccctgctttgacaatttctaaggtcctgctctccatctg 240
Query: 433 ctccctgcttactgatcccaacccagacgaccctcttgtccctgagattgctcacatgta 492
|||||| | ||||| |||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 241 ttccctgttgactgaccccaacccggacgaccctcttgtccctgagattgcccacatgta 300
Query: 493 caagacggatcggcctaagtacgaggcgacagcccgcagctggacccagaa 543
||||||||| ||||| || || || | ||||| ||||||||||| |||||
Sbjct: 301 caagacggaccggccgaaatatgaatcaacagctcgcagctggacgcagaa 351
>gb|BE601217.1|BE601217 PI1_90_D05.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 602
Score = 327 bits (165), Expect = 1e-087
Identities = 288/329 (87%)
Strand = Plus / Plus
Query: 215 gcaaccatcatgggtcctcctgatagtccatatgctggaggtgttttcttggtgaacatt 274
||||| || ||||| || ||||| ||||| |||||||| ||||||||||| |||||||||
Sbjct: 2 gcaacaattatgggaccacctgacagtccctatgctggcggtgttttcttagtgaacatt 61
Query: 275 catttcccgccagactaccccttcaagcctccaaaggtatcttttaagacgaaggtcttc 334
||||||||||| || ||||||||||| ||||||||||| ||||| ||||| |||||||||
Sbjct: 62 catttcccgccggattaccccttcaaacctccaaaggtttctttcaagacaaaggtcttc 121
Query: 335 catccaaacatcaatagtaatggaagcatatgtcttgacattcttaaggagcagtggagc 394
||||| || ||||| || |||||||| ||||| ||||||||||| || ||||||||||||
Sbjct: 122 catcctaatatcaacagcaatggaagtatatgccttgacattctcaaagagcagtggagc 181
Query: 395 cctgctttgacaatctctaaggttttgctttctatctgctccctgcttactgatcccaac 454
|||||||||||||| |||||||| |||| || ||||| |||||| | ||||| ||||||
Sbjct: 182 cctgctttgacaatttctaaggtcctgctctccatctgttccctgttgactgaccccaac 241
Query: 455 ccagacgaccctcttgtccctgagattgctcacatgtacaagacggatcggcctaagtac 514
|| |||||||||||||||||||||||||| ||||||||||||||||| ||||| || ||
Sbjct: 242 ccggacgaccctcttgtccctgagattgcccacatgtacaagacggaccggccgaaatat 301
Query: 515 gaggcgacagcccgcagctggacccagaa 543
||| | ||||| ||||||||||| |||||
Sbjct: 302 gagtcaacagctcgcagctggacgcagaa 330
>gb|BG560107.1|BG560107 RHIZ2_69_D12.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 604
Score = 305 bits (154), Expect = 4e-081
Identities = 271/310 (87%)
Strand = Plus / Plus
Query: 108 ttgtcatggcatccaaacgtatcctcaaggaattaaaggacttgcaaaaggaccctccaa 167
||||||||||||| || |||||||||||||| | |||||| |||| || || || || |
Sbjct: 281 ttgtcatggcatcaaagcgtatcctcaaggagctgaaggacctgcagaaagatcccccca 340
Query: 168 catcatgcagtgcaggtcctgctggtgaggatatgttccactggcaggcaaccatcatgg 227
||||||||||||| ||||||||||||||||| ||||| || ||||| ||||| || ||||
Sbjct: 341 catcatgcagtgccggtcctgctggtgaggacatgtttcattggcaagcaacaattatgg 400
Query: 228 gtcctcctgatagtccatatgctggaggtgttttcttggtgaacattcatttcccgccag 287
| || ||||| ||||| |||||||| ||||||||||| |||||||||||||||||||| |
Sbjct: 401 gaccacctgacagtccctatgctggcggtgttttcttagtgaacattcatttcccgccgg 460
Query: 288 actaccccttcaagcctccaaaggtatcttttaagacgaaggtcttccatccaaacatca 347
| ||||||||||| ||||||||||| ||||| ||||| |||||||||||||| || ||||
Sbjct: 461 attaccccttcaaacctccaaaggtttctttcaagacaaaggtcttccatcctaatatca 520
Query: 348 atagtaatggaagcatatgtcttgacattcttaaggagcagtggagccctgctttgacaa 407
| || |||||||| ||||| ||||||||||| || |||||||||||||||||||||||||
Sbjct: 521 acagcaatggaagtatatgccttgacattctcaaagagcagtggagccctgctttgacaa 580
Query: 408 tctctaaggt 417
| ||||||||
Sbjct: 581 tttctaaggt 590
>gb|BG048781.1|BG048781 OV1_23_A03.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 278
Score = 276 bits (139), Expect = 3e-072
Identities = 223/251 (88%)
Strand = Plus / Plus
Query: 167 acatcatgcagtgcaggtcctgctggtgaggatatgttccactggcaggcaaccatcatg 226
|||||||||||||| ||||||||||||||||| ||||| || ||||| ||||| || |||
Sbjct: 12 acatcatgcagtgccggtcctgctggtgaggacatgtttcattggcaagcaacaattatg 71
Query: 227 ggtcctcctgatagtccatatgctggaggtgttttcttggtgaacattcatttcccgcca 286
|| || ||||| ||||| |||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 72 ggaccacctgacagtccctatgctggcggtgttttcttagtgaacattcatttcccgccg 131
Query: 287 gactaccccttcaagcctccaaaggtatcttttaagacgaaggtcttccatccaaacatc 346
|| ||||||||||| ||||||||||| ||||| ||||| |||||||||||||| || |||
Sbjct: 132 gattaccccttcaaacctccaaaggtttctttcaagacaaaggtcttccatcctaatatc 191
Query: 347 aatagtaatggaagcatatgtcttgacattcttaaggagcagtggagccctgctttgaca 406
|| || |||||||| ||||| ||||||||||| || ||||||||||||||||||||||||
Sbjct: 192 aacagcaatggaagtatatgccttgacattctcaaagagcagtggagccctgctttgaca 251
Query: 407 atctctaaggt 417
|| ||||||||
Sbjct: 252 atttctaaggt 262
>gb|CF486773.1|CF486773 POL1_39_D12.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_39_D12_A002 5', mRNA sequence
Length = 646
Score = 276 bits (139), Expect = 3e-072
Identities = 190/205 (92%), Gaps = 4/205 (1%)
Strand = Plus / Plus
Query: 36 ttccttccccagctccgcaggctgctcatcgccctccctccgcgcc---cccgatccaga 92
||||||||||| |||||||||||||||||||||||| | ||||||| | || || ||
Sbjct: 443 ttccttccccaactccgcaggctgctcatcgccctcaccccgcgccggacgcgcccc-ga 501
Query: 93 tccagatccaggggcttgtcatggcatccaaacgtatcctcaaggaattaaaggacttgc 152
||||||||||||||||| |||||||||| || ||||||||||||||||| |||||| |||
Sbjct: 502 tccagatccaggggcttatcatggcatcaaagcgtatcctcaaggaattgaaggacctgc 561
Query: 153 aaaaggaccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccactggc 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 aaaaggaccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccactggc 621
Query: 213 aggcaaccatcatgggtcctcctga 237
|||||||||||||||||||||||||
Sbjct: 622 aggcaaccatcatgggtcctcctga 646
>gb|CW180084.1|CW180084 104_594_11160449_148_36634_071 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11160449, DNA
sequence
Length = 681
Score = 258 bits (130), Expect = 8e-067
Identities = 145/150 (96%)
Strand = Plus / Plus
Query: 414 aggttttgctttctatctgctccctgcttactgatcccaacccagacgaccctcttgtcc 473
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 373 aggttttgctttctatctgctccctgcttactgatcccaacccagatgaccctcttgtcc 432
Query: 474 ctgagattgctcacatgtacaagacggatcggcctaagtacgaggcgacagcccgcagct 533
|||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 433 ctgagattgctcacatgtacaagacggaccggcctaagtatgaggcgacagcccgcagct 492
Query: 534 ggacccagaagtacgccatgggatgaaatg 563
||||||||||||| || |||||||||||||
Sbjct: 493 ggacccagaagtatgctatgggatgaaatg 522
Score = 71.9 bits (36), Expect = 9e-011
Identities = 63/71 (88%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 579 taaatgcagacgattgtggtgttg--cccatgaaactgttatcggggacgtatgttcttc 636
|||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||
Sbjct: 547 taaatgcagacgattgtggtgttgcccccatgaaactgtttctggggacgaatgttcttc 606
Query: 637 tgttccttgtg 647
|||||||||
Sbjct: 607 cattccttgtg 617
>gb|CW365759.1|CW365759 fsbb001f038h04f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f038h04, DNA
sequence
Length = 649
Score = 258 bits (130), Expect = 8e-067
Identities = 145/150 (96%)
Strand = Plus / Plus
Query: 414 aggttttgctttctatctgctccctgcttactgatcccaacccagacgaccctcttgtcc 473
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 313 aggttttgctttctatctgctccctgcttactgatcccaacccagatgaccctcttgtcc 372
Query: 474 ctgagattgctcacatgtacaagacggatcggcctaagtacgaggcgacagcccgcagct 533
|||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 373 ctgagattgctcacatgtacaagacggaccggcctaagtatgaggcgacagcccgcagct 432
Query: 534 ggacccagaagtacgccatgggatgaaatg 563
||||||||||||| || |||||||||||||
Sbjct: 433 ggacccagaagtatgctatgggatgaaatg 462
Score = 111 bits (56), Expect = 1e-022
Identities = 140/166 (84%), Gaps = 14/166 (8%)
Strand = Plus / Plus
Query: 579 taaatgcagacgattgtggtgttgccc--atgaaactgttatcggggacgtatgttcttc 636
||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||
Sbjct: 487 taaatgcagacgattgtggtgttgcccccatgaaactgtttctggggacgaatgttcttc 546
Query: 637 tgttccttgtg---------cattctccgatccatctctaggatccgagttctagtccaa 687
||||||||| ||||||||||||||||| |||||| |||| |||||||||
Sbjct: 547 cattccttgtgggccgtgtgcattctccgatccatct--aggatc-gagtcctagtccaa 603
Query: 688 cattaacctaccattgccttgggtaatgagatgacttgtgcttgct 733
||| |||||||||||||| | | |||||||||||||| ||||||||
Sbjct: 604 catcaacctaccattgccgtcgataatgagatgacttatgcttgct 649
>gb|CD431326.1|CD431326 ETH1_8_A10.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_8_A10_A002 3', mRNA sequence
Length = 601
Score = 258 bits (130), Expect = 8e-067
Identities = 242/278 (87%), Gaps = 1/278 (0%)
Strand = Plus / Plus
Query: 266 gtgaacattcatttcccgccagactaccccttcaagcctccaaaggtatcttttaagacg 325
|||||||||||||||||||| || ||||||||||| ||||||||||| | ||| |||||
Sbjct: 3 gtgaacattcatttcccgccggattaccccttcaaacctccaaaggttt-tttcaagaca 61
Query: 326 aaggtcttccatccaaacatcaatagtaatggaagcatatgtcttgacattcttaaggag 385
|||||||||||||| || ||||| || |||||||| ||||| ||||||||||| || |||
Sbjct: 62 aaggtcttccatcctaatatcaacagcaatggaagtatatgccttgacattctcaaagag 121
Query: 386 cagtggagccctgctttgacaatctctaaggttttgctttctatctgctccctgcttact 445
||||||||||||||||||||||| | |||||| |||| || ||||| |||||| | |||
Sbjct: 122 cagtggagccctgctttgacaatttttaaggtcctgctctccatctgttccctgttgact 181
Query: 446 gatcccaacccagacgaccctcttgtccctgagattgctcacatgtacaagacggatcgg 505
|| |||||||| ||||||||| |||||||||||||||| ||||||||||||||||| |||
Sbjct: 182 gaccccaacccggacgacccttttgtccctgagattgcccacatgtacaagacggaccgg 241
Query: 506 cctaagtacgaggcgacagcccgcagctggacccagaa 543
|| || || ||| | ||||| ||||||||||| |||||
Sbjct: 242 ccgaaatatgagtcaacagctcgcagctggacgcagaa 279
>gb|CF432310.1|CF432310 NIT1_15_F12.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_15_F12_A002 5', mRNA sequence
Length = 156
Score = 256 bits (129), Expect = 3e-066
Identities = 144/149 (96%)
Strand = Plus / Plus
Query: 150 tgcaaaaggaccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccact 209
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 8 tgcaaaaggaccctccaacatcatgcagcgcaggtcctgctggtgatgatatgttccact 67
Query: 210 ggcaggcaaccatcatgggtcctcctgatagtccatatgctggaggtgttttcttggtga 269
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 68 ggcaggcaaccatcatgggtcctcctgatagtccatatgctggaggtgttttcttagtga 127
Query: 270 acattcatttcccgccagactaccccttc 298
||||||||||||| || ||||||||||||
Sbjct: 128 acattcatttccccccggactaccccttc 156
>gb|CW452618.1|CW452618 fsbb001f193e04k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f193e04, DNA
sequence
Length = 540
Score = 230 bits (116), Expect = 2e-058
Identities = 131/136 (96%)
Strand = Plus / Plus
Query: 428 atctgctccctgcttactgatcccaacccagacgaccctcttgtccctgagattgctcac 487
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 atctgctccctgcttactgatcccaacccagatgaccctcttgtccctgagattgctcac 60
Query: 488 atgtacaagacggatcggcctaagtacgaggcgacagcccgcagctggacccagaagtac 547
|||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 61 atgtacaagacggaccggcctaagtatgaggcgacagcccgcagctggacccagaagtat 120
Query: 548 gccatgggatgaaatg 563
|| |||||||||||||
Sbjct: 121 gctatgggatgaaatg 136
Score = 159 bits (80), Expect = 5e-037
Identities = 201/239 (84%), Gaps = 23/239 (9%)
Strand = Plus / Plus
Query: 579 taaatgcagacgattgtggtgttgccc--atgaaactgttatcggggacgtatgttcttc 636
||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||
Sbjct: 161 taaatgcagacgattgtggtgttgcccccatgaaactgtttctggggacgaatgttcttc 220
Query: 637 tgttccttgtg---------cattctccgatccatctctaggatccgagttctagtccaa 687
||||||||| ||||||||||||||||| |||||| |||| |||||||||
Sbjct: 221 cattccttgtggcccgtgtgcattctccgatccatct--aggatc-gagtcctagtccaa 277
Query: 688 cattaacctaccattgccttgggtaatgagatgacttgtgcttgctgtggtaactatgct 747
||| |||||||||||||| | | |||||||||||||| ||||||||||| ||||||||||
Sbjct: 278 catcaacctaccattgccgtcgataatgagatgacttatgcttgctgtgataactatgct 337
Query: 748 ag-tgttgatgtt--------aatgattctcattgagggcttgttcagggatcggaggg 797
|| |||||||||| ||||||||||| ||||||||||||||||||| ||||||
Sbjct: 338 agttgttgatgttatttggtaaatgattctcagtgagggcttgttcagggattggaggg 396
>gb|AW745429.1|AW745429 WS1_34_A12.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 596
Score = 214 bits (108), Expect = 1e-053
Identities = 348/428 (81%)
Strand = Plus / Plus
Query: 128 atcctcaaggaattaaaggacttgcaaaaggaccctccaacatcatgcagtgcaggtcct 187
||||| ||||| || |||||| |||| |||||||| || || || |||||||||||||||
Sbjct: 162 atcctgaaggagttgaaggacctgcagaaggacccgcccacctcctgcagtgcaggtcct 221
Query: 188 gctggtgaggatatgttccactggcaggcaaccatcatgggtcctcctgatagtccatat 247
| ||||||||| |||||||| ||||| || ||||||||||| || | || || |||| |
Sbjct: 222 gttggtgaggacatgttccattggcaagctaccatcatggggccctcggacagcccattt 281
Query: 248 gctggaggtgttttcttggtgaacattcatttcccgccagactaccccttcaagcctcca 307
|| || || || ||||||||||||||||| ||||| || || || || |||||||| |||
Sbjct: 282 gcaggtggggtattcttggtgaacattcacttcccaccggattatcctttcaagccacca 341
Query: 308 aaggtatcttttaagacgaaggtcttccatccaaacatcaatagtaatggaagcatatgt 367
||||| |||||| || ||||| ||||| || ||||| || || || || ||||| ||
Sbjct: 342 aaggtgtcttttcgcaccaaggttttccacccgaacattaacagcaacggcagcatttgc 401
Query: 368 cttgacattcttaaggagcagtggagccctgctttgacaatctctaaggttttgctttct 427
|||||||| |||||||| ||||||||||||||||| || || || |||||| | || ||
Sbjct: 402 cttgacatccttaaggaacagtggagccctgctttaaccatatcgaaggttctcctgtca 461
Query: 428 atctgctccctgcttactgatcccaacccagacgaccctcttgtccctgagattgctcac 487
||||| || ||||| || || || ||||| || || ||||||||||||||||||||||||
Sbjct: 462 atctgttcgctgctcacggacccgaaccctgatgatcctcttgtccctgagattgctcac 521
Query: 488 atgtacaagacggatcggcctaagtacgaggcgacagcccgcagctggacccagaagtac 547
||||||||||| || || | ||||| ||| | || || ||| |||||| ||||||||
Sbjct: 522 atgtacaagactgacagggccaagtatgagtccactgcacgctcctggacgcagaagtat 581
Query: 548 gccatggg 555
||||||||
Sbjct: 582 gccatggg 589
>gb|AW745648.1|AW745648 WS1_36_D06.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 591
Score = 214 bits (108), Expect = 1e-053
Identities = 348/428 (81%)
Strand = Plus / Plus
Query: 128 atcctcaaggaattaaaggacttgcaaaaggaccctccaacatcatgcagtgcaggtcct 187
||||| ||||| || |||||| |||| |||||||| || || || |||||||||||||||
Sbjct: 152 atcctgaaggagttgaaggacctgcagaaggacccgcccacctcctgcagtgcaggtcct 211
Query: 188 gctggtgaggatatgttccactggcaggcaaccatcatgggtcctcctgatagtccatat 247
| ||||||||| |||||||| ||||| || ||||||||||| || | || || |||| |
Sbjct: 212 gttggtgaggacatgttccattggcaagctaccatcatggggccctcggacagcccattt 271
Query: 248 gctggaggtgttttcttggtgaacattcatttcccgccagactaccccttcaagcctcca 307
|| || || || ||||||||||||||||| ||||| || || || || |||||||| |||
Sbjct: 272 gcaggtggggtattcttggtgaacattcacttcccaccggattatcctttcaagccacca 331
Query: 308 aaggtatcttttaagacgaaggtcttccatccaaacatcaatagtaatggaagcatatgt 367
||||| |||||| || ||||| ||||| || ||||| || || || || ||||| ||
Sbjct: 332 aaggtgtcttttcgcaccaaggttttccacccgaacattaacagcaacggcagcatttgc 391
Query: 368 cttgacattcttaaggagcagtggagccctgctttgacaatctctaaggttttgctttct 427
|||||||| |||||||| ||||||||||||||||| || || || |||||| | || ||
Sbjct: 392 cttgacatccttaaggaacagtggagccctgctttaaccatatcgaaggttctcctgtca 451
Query: 428 atctgctccctgcttactgatcccaacccagacgaccctcttgtccctgagattgctcac 487
||||| || ||||| || || || ||||| || || ||||||||||||||||||||||||
Sbjct: 452 atctgttcgctgctcacggacccgaaccctgatgatcctcttgtccctgagattgctcac 511
Query: 488 atgtacaagacggatcggcctaagtacgaggcgacagcccgcagctggacccagaagtac 547
||||||||||| || || | ||||| ||| | || || ||| |||||| ||||||||
Sbjct: 512 atgtacaagactgacagggccaagtatgagtccactgcacgctcctggacgcagaagtat 571
Query: 548 gccatggg 555
||||||||
Sbjct: 572 gccatggg 579
>gb|AW924658.1|AW924658 WS1_71_H06.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 628
Score = 214 bits (108), Expect = 1e-053
Identities = 348/428 (81%)
Strand = Plus / Plus
Query: 128 atcctcaaggaattaaaggacttgcaaaaggaccctccaacatcatgcagtgcaggtcct 187
||||| ||||| || |||||| |||| |||||||| || || || |||||||||||||||
Sbjct: 152 atcctgaaggagttgaaggacctgcagaaggacccgcccacctcctgcagtgcaggtcct 211
Query: 188 gctggtgaggatatgttccactggcaggcaaccatcatgggtcctcctgatagtccatat 247
| ||||||||| |||||||| ||||| || ||||||||||| || | || || |||| |
Sbjct: 212 gttggtgaggacatgttccattggcaagctaccatcatggggccctcggacagcccattt 271
Query: 248 gctggaggtgttttcttggtgaacattcatttcccgccagactaccccttcaagcctcca 307
|| || || || ||||||||||||||||| ||||| || || || || |||||||| |||
Sbjct: 272 gcaggtggggtattcttggtgaacattcacttcccaccggattatcctttcaagccacca 331
Query: 308 aaggtatcttttaagacgaaggtcttccatccaaacatcaatagtaatggaagcatatgt 367
||||| |||||| || ||||| ||||| || ||||| || || || || ||||| ||
Sbjct: 332 aaggtgtcttttcgcaccaaggttttccacccgaacattaacagcaacggcagcatttgc 391
Query: 368 cttgacattcttaaggagcagtggagccctgctttgacaatctctaaggttttgctttct 427
|||||||| |||||||| ||||||||||||||||| || || || |||||| | || ||
Sbjct: 392 cttgacatccttaaggaacagtggagccctgctttaaccatatcgaaggttctcctgtca 451
Query: 428 atctgctccctgcttactgatcccaacccagacgaccctcttgtccctgagattgctcac 487
||||| || ||||| || || || ||||| || || ||||||||||||||||||||||||
Sbjct: 452 atctgttcgctgctcacggacccgaaccctgatgatcctcttgtccctgagattgctcac 511
Query: 488 atgtacaagacggatcggcctaagtacgaggcgacagcccgcagctggacccagaagtac 547
||||||||||| || || | ||||| ||| | || || ||| |||||| ||||||||
Sbjct: 512 atgtacaagactgacagggccaagtatgagtccactgcacgctcctggacgcagaagtat 571
Query: 548 gccatggg 555
||||||||
Sbjct: 572 gccatggg 579
>gb|BE362368.1|BE362368 DG1_86_E12.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 598
Score = 214 bits (108), Expect = 1e-053
Identities = 348/428 (81%)
Strand = Plus / Plus
Query: 128 atcctcaaggaattaaaggacttgcaaaaggaccctccaacatcatgcagtgcaggtcct 187
||||| ||||| || |||||| |||| |||||||| || || || |||||||||||||||
Sbjct: 160 atcctgaaggagttgaaggacctgcagaaggacccgcccacctcctgcagtgcaggtcct 219
Query: 188 gctggtgaggatatgttccactggcaggcaaccatcatgggtcctcctgatagtccatat 247
| ||||||||| |||||||| ||||| || ||||||||||| || | || || |||| |
Sbjct: 220 gttggtgaggacatgttccattggcaagctaccatcatggggccctcggacagcccattt 279
Query: 248 gctggaggtgttttcttggtgaacattcatttcccgccagactaccccttcaagcctcca 307
|| || || || ||||||||||||||||| ||||| || || || || |||||||| |||
Sbjct: 280 gcaggtggggtattcttggtgaacattcacttcccaccggattatcctttcaagccacca 339
Query: 308 aaggtatcttttaagacgaaggtcttccatccaaacatcaatagtaatggaagcatatgt 367
||||| |||||| || ||||| ||||| || ||||| || || || || ||||| ||
Sbjct: 340 aaggtgtcttttcgcaccaaggttttccacccgaacattaacagcaacggcagcatttgc 399
Query: 368 cttgacattcttaaggagcagtggagccctgctttgacaatctctaaggttttgctttct 427
|||||||| |||||||| ||||||||||||||||| || || || |||||| | || ||
Sbjct: 400 cttgacatccttaaggaacagtggagccctgctttaaccatatcgaaggttctcctgtca 459
Query: 428 atctgctccctgcttactgatcccaacccagacgaccctcttgtccctgagattgctcac 487
||||| || ||||| || || || ||||| || || ||||||||||||||||||||||||
Sbjct: 460 atctgttcgctgctcacggacccgaaccctgatgatcctcttgtccctgagattgctcac 519
Query: 488 atgtacaagacggatcggcctaagtacgaggcgacagcccgcagctggacccagaagtac 547
||||||||||| || || | ||||| ||| | || || ||| |||||| ||||||||
Sbjct: 520 atgtacaagactgacagggccaagtatgagtccactgcacgctcctggacgcagaagtat 579
Query: 548 gccatggg 555
||||||||
Sbjct: 580 gccatggg 587
>gb|BE593870.1|BE593870 WS1_103_D04.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 667
Score = 214 bits (108), Expect = 1e-053
Identities = 348/428 (81%)
Strand = Plus / Plus
Query: 128 atcctcaaggaattaaaggacttgcaaaaggaccctccaacatcatgcagtgcaggtcct 187
||||| ||||| || |||||| |||| |||||||| || || || |||||||||||||||
Sbjct: 39 atcctgaaggagttgaaggacctgcagaaggacccgcccacctcctgcagtgcaggtcct 98
Query: 188 gctggtgaggatatgttccactggcaggcaaccatcatgggtcctcctgatagtccatat 247
| ||||||||| |||||||| ||||| || ||||||||||| || | || || |||| |
Sbjct: 99 gttggtgaggacatgttccattggcaagctaccatcatggggccctcggacagcccattt 158
Query: 248 gctggaggtgttttcttggtgaacattcatttcccgccagactaccccttcaagcctcca 307
|| || || || ||||||||||||||||| ||||| || || || || |||||||| |||
Sbjct: 159 gcaggtggggtattcttggtgaacattcacttcccaccggattatcctttcaagccacca 218
Query: 308 aaggtatcttttaagacgaaggtcttccatccaaacatcaatagtaatggaagcatatgt 367
||||| |||||| || ||||| ||||| || ||||| || || || || ||||| ||
Sbjct: 219 aaggtgtcttttcgcaccaaggttttccacccgaacattaacagcaacggcagcatttgc 278
Query: 368 cttgacattcttaaggagcagtggagccctgctttgacaatctctaaggttttgctttct 427
|||||||| |||||||| ||||||||||||||||| || || || |||||| | || ||
Sbjct: 279 cttgacatccttaaggaacagtggagccctgctttaaccatatcgaaggttctcctgtca 338
Query: 428 atctgctccctgcttactgatcccaacccagacgaccctcttgtccctgagattgctcac 487
||||| || ||||| || || || ||||| || || ||||||||||||||||||||||||
Sbjct: 339 atctgttcgctgctcacggacccgaaccctgatgatcctcttgtccctgagattgctcac 398
Query: 488 atgtacaagacggatcggcctaagtacgaggcgacagcccgcagctggacccagaagtac 547
||||||||||| || || | ||||| ||| | || || ||| |||||| ||||||||
Sbjct: 399 atgtacaagactgacagggccaagtatgagtccactgcacgctcctggacgcagaagtat 458
Query: 548 gccatggg 555
||||||||
Sbjct: 459 gccatggg 466
>gb|BE593878.1|BE593878 WS1_103_E01.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 530
Score = 214 bits (108), Expect = 1e-053
Identities = 348/428 (81%)
Strand = Plus / Plus
Query: 128 atcctcaaggaattaaaggacttgcaaaaggaccctccaacatcatgcagtgcaggtcct 187
||||| ||||| || |||||| |||| |||||||| || || || |||||||||||||||
Sbjct: 3 atcctgaaggagttgaaggacctgcagaaggacccgcccacctcctgcagtgcaggtcct 62
Query: 188 gctggtgaggatatgttccactggcaggcaaccatcatgggtcctcctgatagtccatat 247
| ||||||||| |||||||| ||||| || ||||||||||| || | || || |||| |
Sbjct: 63 gttggtgaggacatgttccattggcaagctaccatcatggggccctcggacagcccattt 122
Query: 248 gctggaggtgttttcttggtgaacattcatttcccgccagactaccccttcaagcctcca 307
|| || || || ||||||||||||||||| ||||| || || || || |||||||| |||
Sbjct: 123 gcaggtggggtattcttggtgaacattcacttcccaccggattatcctttcaagccacca 182
Query: 308 aaggtatcttttaagacgaaggtcttccatccaaacatcaatagtaatggaagcatatgt 367
||||| |||||| || ||||| ||||| || ||||| || || || || ||||| ||
Sbjct: 183 aaggtgtcttttcgcaccaaggttttccacccgaacattaacagcaacggcagcatttgc 242
Query: 368 cttgacattcttaaggagcagtggagccctgctttgacaatctctaaggttttgctttct 427
|||||||| |||||||| ||||||||||||||||| || || || |||||| | || ||
Sbjct: 243 cttgacatccttaaggaacagtggagccctgctttaaccatatcgaaggttctcctgtca 302
Query: 428 atctgctccctgcttactgatcccaacccagacgaccctcttgtccctgagattgctcac 487
||||| || ||||| || || || ||||| || || ||||||||||||||||||||||||
Sbjct: 303 atctgttcgctgctcacggacccgaaccctgatgatcctcttgtccctgagattgctcac 362
Query: 488 atgtacaagacggatcggcctaagtacgaggcgacagcccgcagctggacccagaagtac 547
||||||||||| || || | ||||| ||| | || || ||| |||||| ||||||||
Sbjct: 363 atgtacaagactgacagggccaagtatgagtccactgcacgctcctggacgcagaagtat 422
Query: 548 gccatggg 555
||||||||
Sbjct: 423 gccatggg 430
>gb|BM323706.1|BM323706 PIC1_22_D03.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 507
Score = 214 bits (108), Expect = 1e-053
Identities = 348/428 (81%)
Strand = Plus / Plus
Query: 128 atcctcaaggaattaaaggacttgcaaaaggaccctccaacatcatgcagtgcaggtcct 187
||||| ||||| || |||||| |||| |||||||| || || || |||||||||||||||
Sbjct: 49 atcctgaaggagttgaaggacctgcagaaggacccgcccacctcctgcagtgcaggtcct 108
Query: 188 gctggtgaggatatgttccactggcaggcaaccatcatgggtcctcctgatagtccatat 247
| ||||||||| |||||||| ||||| || ||||||||||| || | || || |||| |
Sbjct: 109 gttggtgaggacatgttccattggcaagctaccatcatggggccctcggacagcccattt 168
Query: 248 gctggaggtgttttcttggtgaacattcatttcccgccagactaccccttcaagcctcca 307
|| || || || ||||||||||||||||| ||||| || || || || |||||||| |||
Sbjct: 169 gcaggtggggtattcttggtgaacattcacttcccaccggattatcctttcaagccacca 228
Query: 308 aaggtatcttttaagacgaaggtcttccatccaaacatcaatagtaatggaagcatatgt 367
||||| |||||| || ||||| ||||| || ||||| || || || || ||||| ||
Sbjct: 229 aaggtgtcttttcgcaccaaggttttccacccgaacattaacagcaacggcagcatttgc 288
Query: 368 cttgacattcttaaggagcagtggagccctgctttgacaatctctaaggttttgctttct 427
|||||||| |||||||| ||||||||||||||||| || || || |||||| | || ||
Sbjct: 289 cttgacatccttaaggaacagtggagccctgctttaaccatatcgaaggttctcctgtca 348
Query: 428 atctgctccctgcttactgatcccaacccagacgaccctcttgtccctgagattgctcac 487
||||| || ||||| || || || ||||| || || ||||||||||||||||||||||||
Sbjct: 349 atctgttcgctgctcacggacccgaaccctgatgatcctcttgtccctgagattgctcac 408
Query: 488 atgtacaagacggatcggcctaagtacgaggcgacagcccgcagctggacccagaagtac 547
||||||||||| || || | ||||| ||| | || || ||| |||||| ||||||||
Sbjct: 409 atgtacaagactgacagggccaagtatgagtccactgcacgctcctggacgcagaagtat 468
Query: 548 gccatggg 555
||||||||
Sbjct: 469 gccatggg 476
>gb|BM324291.1|BM324291 PIC1_26_E11.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 628
Score = 214 bits (108), Expect = 1e-053
Identities = 348/428 (81%)
Strand = Plus / Plus
Query: 128 atcctcaaggaattaaaggacttgcaaaaggaccctccaacatcatgcagtgcaggtcct 187
||||| ||||| || |||||| |||| |||||||| || || || |||||||||||||||
Sbjct: 49 atcctgaaggagttgaaggacctgcagaaggacccgcccacctcctgcagtgcaggtcct 108
Query: 188 gctggtgaggatatgttccactggcaggcaaccatcatgggtcctcctgatagtccatat 247
| ||||||||| |||||||| ||||| || ||||||||||| || | || || |||| |
Sbjct: 109 gttggtgaggacatgttccattggcaagctaccatcatggggccctcggacagcccattt 168
Query: 248 gctggaggtgttttcttggtgaacattcatttcccgccagactaccccttcaagcctcca 307
|| || || || ||||||||||||||||| ||||| || || || || |||||||| |||
Sbjct: 169 gcaggtggggtattcttggtgaacattcacttcccaccggattatcctttcaagccacca 228
Query: 308 aaggtatcttttaagacgaaggtcttccatccaaacatcaatagtaatggaagcatatgt 367
||||| |||||| || ||||| ||||| || ||||| || || || || ||||| ||
Sbjct: 229 aaggtgtcttttcgcaccaaggttttccacccgaacattaacagcaacggcagcatttgc 288
Query: 368 cttgacattcttaaggagcagtggagccctgctttgacaatctctaaggttttgctttct 427
|||||||| |||||||| ||||||||||||||||| || || || |||||| | || ||
Sbjct: 289 cttgacatccttaaggaacagtggagccctgctttaaccatatcgaaggttctcctgtca 348
Query: 428 atctgctccctgcttactgatcccaacccagacgaccctcttgtccctgagattgctcac 487
||||| || ||||| || || || ||||| || || ||||||||||||||||||||||||
Sbjct: 349 atctgttcgctgctcacggacccgaaccctgatgatcctcttgtccctgagattgctcac 408
Query: 488 atgtacaagacggatcggcctaagtacgaggcgacagcccgcagctggacccagaagtac 547
||||||||||| || || | ||||| ||| | || || ||| |||||| ||||||||
Sbjct: 409 atgtacaagactgacagggccaagtatgagtccactgcacgctcctggacgcagaagtat 468
Query: 548 gccatggg 555
||||||||
Sbjct: 469 gccatggg 476
>gb|CD226755.1|CD226755 CCC1_47_E08.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_47_E08_A007 5', mRNA sequence
Length = 656
Score = 214 bits (108), Expect = 1e-053
Identities = 348/428 (81%)
Strand = Plus / Plus
Query: 128 atcctcaaggaattaaaggacttgcaaaaggaccctccaacatcatgcagtgcaggtcct 187
||||| ||||| || |||||| |||| |||||||| || || || |||||||||||||||
Sbjct: 171 atcctgaaggagttgaaggacctgcagaaggacccgcccacctcctgcagtgcaggtcct 230
Query: 188 gctggtgaggatatgttccactggcaggcaaccatcatgggtcctcctgatagtccatat 247
| ||||||||| |||||||| ||||| || ||||||||||| || | || || |||| |
Sbjct: 231 gttggtgaggacatgttccattggcaagctaccatcatggggccctcggacagcccattt 290
Query: 248 gctggaggtgttttcttggtgaacattcatttcccgccagactaccccttcaagcctcca 307
|| || || || ||||||||||||||||| ||||| || || || || |||||||| |||
Sbjct: 291 gcaggtggggtattcttggtgaacattcacttcccaccggattatcctttcaagccacca 350
Query: 308 aaggtatcttttaagacgaaggtcttccatccaaacatcaatagtaatggaagcatatgt 367
||||| |||||| || ||||| ||||| || ||||| || || || || ||||| ||
Sbjct: 351 aaggtgtcttttcgcaccaaggttttccacccgaacattaacagcaacggcagcatttgc 410
Query: 368 cttgacattcttaaggagcagtggagccctgctttgacaatctctaaggttttgctttct 427
|||||||| |||||||| ||||||||||||||||| || || || |||||| | || ||
Sbjct: 411 cttgacatccttaaggaacagtggagccctgctttaaccatatcgaaggttctcctgtca 470
Query: 428 atctgctccctgcttactgatcccaacccagacgaccctcttgtccctgagattgctcac 487
||||| || ||||| || || || ||||| || || ||||||||||||||||||||||||
Sbjct: 471 atctgttcgctgctcacggacccgaaccctgatgatcctcttgtccctgagattgctcac 530
Query: 488 atgtacaagacggatcggcctaagtacgaggcgacagcccgcagctggacccagaagtac 547
||||||||||| || || | ||||| ||| | || || ||| |||||| ||||||||
Sbjct: 531 atgtacaagactgacagggccaagtatgagtccactgcacgctcctggacgcagaagtat 590
Query: 548 gccatggg 555
||||||||
Sbjct: 591 gccatggg 598
>gb|CD462073.1|CD462073 SA1_39_H12.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_39_H12_A002 3', mRNA sequence
Length = 656
Score = 214 bits (108), Expect = 1e-053
Identities = 348/428 (81%)
Strand = Plus / Plus
Query: 128 atcctcaaggaattaaaggacttgcaaaaggaccctccaacatcatgcagtgcaggtcct 187
||||| ||||| || |||||| |||| |||||||| || || || |||||||||||||||
Sbjct: 7 atcctgaaggagttgaaggacctgcagaaggacccgcccacctcctgcagtgcaggtcct 66
Query: 188 gctggtgaggatatgttccactggcaggcaaccatcatgggtcctcctgatagtccatat 247
| ||||||||| |||||||| ||||| || ||||||||||| || | || || |||| |
Sbjct: 67 gttggtgaggacatgttccattggcaagctaccatcatggggccctcggacagcccattt 126
Query: 248 gctggaggtgttttcttggtgaacattcatttcccgccagactaccccttcaagcctcca 307
|| || || || ||||||||||||||||| ||||| || || || || |||||||| |||
Sbjct: 127 gcaggtggggtattcttggtgaacattcacttcccaccggattatcctttcaagccacca 186
Query: 308 aaggtatcttttaagacgaaggtcttccatccaaacatcaatagtaatggaagcatatgt 367
||||| |||||| || ||||| ||||| || ||||| || || || || ||||| ||
Sbjct: 187 aaggtgtcttttcgcaccaaggttttccacccgaacattaacagcaacggcagcatttgc 246
Query: 368 cttgacattcttaaggagcagtggagccctgctttgacaatctctaaggttttgctttct 427
|||||||| |||||||| ||||||||||||||||| || || || |||||| | || ||
Sbjct: 247 cttgacatccttaaggaacagtggagccctgctttaaccatatcgaaggttctcctgtca 306
Query: 428 atctgctccctgcttactgatcccaacccagacgaccctcttgtccctgagattgctcac 487
||||| || ||||| || || || ||||| || || ||||||||||||||||||||||||
Sbjct: 307 atctgttcgctgctcacggacccgaaccctgatgatcctcttgtccctgagattgctcac 366
Query: 488 atgtacaagacggatcggcctaagtacgaggcgacagcccgcagctggacccagaagtac 547
||||||||||| || || | ||||| ||| | || || ||| |||||| ||||||||
Sbjct: 367 atgtacaagactgacagggccaagtatgagtccactgcacgctcctggacgcagaagtat 426
Query: 548 gccatggg 555
||||||||
Sbjct: 427 gccatggg 434
>gb|CN145142.1|CN145142 WOUND1_27_C01.b2_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_27_C01_A002 3', mRNA sequence
Length = 636
Score = 214 bits (108), Expect = 1e-053
Identities = 348/428 (81%)
Strand = Plus / Plus
Query: 128 atcctcaaggaattaaaggacttgcaaaaggaccctccaacatcatgcagtgcaggtcct 187
||||| ||||| || |||||| |||| |||||||| || || || |||||||||||||||
Sbjct: 7 atcctgaaggagttgaaggacctgcagaaggacccgcccacctcctgcagtgcaggtcct 66
Query: 188 gctggtgaggatatgttccactggcaggcaaccatcatgggtcctcctgatagtccatat 247
| ||||||||| |||||||| ||||| || ||||||||||| || | || || |||| |
Sbjct: 67 gttggtgaggacatgttccattggcaagctaccatcatggggccctcggacagcccattt 126
Query: 248 gctggaggtgttttcttggtgaacattcatttcccgccagactaccccttcaagcctcca 307
|| || || || ||||||||||||||||| ||||| || || || || |||||||| |||
Sbjct: 127 gcaggtggggtattcttggtgaacattcacttcccaccggattatcctttcaagccacca 186
Query: 308 aaggtatcttttaagacgaaggtcttccatccaaacatcaatagtaatggaagcatatgt 367
||||| |||||| || ||||| ||||| || ||||| || || || || ||||| ||
Sbjct: 187 aaggtgtcttttcgcaccaaggttttccacccgaacattaacagcaacggcagcatttgc 246
Query: 368 cttgacattcttaaggagcagtggagccctgctttgacaatctctaaggttttgctttct 427
|||||||| |||||||| ||||||||||||||||| || || || |||||| | || ||
Sbjct: 247 cttgacatccttaaggaacagtggagccctgctttaaccatatcgaaggttctcctgtca 306
Query: 428 atctgctccctgcttactgatcccaacccagacgaccctcttgtccctgagattgctcac 487
||||| || ||||| || || || ||||| || || ||||||||||||||||||||||||
Sbjct: 307 atctgttcgctgctcacggacccgaaccctgatgatcctcttgtccctgagattgctcac 366
Query: 488 atgtacaagacggatcggcctaagtacgaggcgacagcccgcagctggacccagaagtac 547
||||||||||| || || | ||||| ||| | || || ||| |||||| ||||||||
Sbjct: 367 atgtacaagactgacagggccaagtatgagtccactgcacgctcctggacgcagaagtat 426
Query: 548 gccatggg 555
||||||||
Sbjct: 427 gccatggg 434
>gb|DN551766.1|DN551766 pSPR-RT-A-H1_G05_C246 pSPR Sorghum propinquum cDNA, mRNA sequence
Length = 828
Score = 214 bits (108), Expect = 1e-053
Identities = 348/428 (81%)
Strand = Plus / Minus
Query: 128 atcctcaaggaattaaaggacttgcaaaaggaccctccaacatcatgcagtgcaggtcct 187
||||| ||||| || |||||| |||| |||||||| || || || |||||||||||||||
Sbjct: 681 atcctgaaggagttgaaggacctgcagaaggacccgcccacctcctgcagtgcaggtcct 622
Query: 188 gctggtgaggatatgttccactggcaggcaaccatcatgggtcctcctgatagtccatat 247
| ||||||||| |||||||| ||||| || ||||||||||| || | || || |||| |
Sbjct: 621 gttggtgaggacatgttccattggcaagctaccatcatggggccctcggacagcccattt 562
Query: 248 gctggaggtgttttcttggtgaacattcatttcccgccagactaccccttcaagcctcca 307
|| || || || ||||||||||||||||| ||||| || || || || |||||||| |||
Sbjct: 561 gcaggtggggtattcttggtgaacattcacttcccaccggattatcctttcaagccacca 502
Query: 308 aaggtatcttttaagacgaaggtcttccatccaaacatcaatagtaatggaagcatatgt 367
||||| |||||| || ||||| ||||| || ||||| || || || || ||||| ||
Sbjct: 501 aaggtgtcttttcgcaccaaggttttccacccgaacattaacagcaacggcagcatttgc 442
Query: 368 cttgacattcttaaggagcagtggagccctgctttgacaatctctaaggttttgctttct 427
|||||||| |||||||| ||||||||||||||||| || || || |||||| | || ||
Sbjct: 441 cttgacatccttaaggaacagtggagccctgctttaaccatatcgaaggttctcctgtca 382
Query: 428 atctgctccctgcttactgatcccaacccagacgaccctcttgtccctgagattgctcac 487
||||| || ||||| || || || ||||| || || ||||||||||||||||||||||||
Sbjct: 381 atctgttcgctgctcacggacccgaaccctgatgatcctcttgtccctgagattgctcac 322
Query: 488 atgtacaagacggatcggcctaagtacgaggcgacagcccgcagctggacccagaagtac 547
||||||||||| || || | ||||| ||| | || || ||| |||||| ||||||||
Sbjct: 321 atgtacaagactgacagggccaagtatgagtccactgcacgctcctggacgcagaagtat 262
Query: 548 gccatggg 555
||||||||
Sbjct: 261 gccatggg 254
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 207,938
Number of Sequences: 832831
Number of extensions: 207938
Number of successful extensions: 56758
Number of sequences better than 0.5: 207
Number of HSP's better than 0.5 without gapping: 206
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 56260
Number of HSP's gapped (non-prelim): 391
length of query: 868
length of database: 491,359,669
effective HSP length: 20
effective length of query: 848
effective length of database: 474,703,049
effective search space: 402548185552
effective search space used: 402548185552
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)