BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131572.2.6
(1100 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DN551708.1|DN551708 pSPR-L_F12_C225 pSPR Sorghum propinq... 737 0.0
gb|BE356245.1|BE356245 DG1_123_B01.g1_A002 Dark Grown 1 (DG... 583 e-164
gb|DN552619.1|DN552619 pSHR-RT-A-H2_C11_C378 pSHR Sorghum h... 569 e-160
gb|CN152433.1|CN152433 WOUND1_82_B08.b1_A002 Wounded leaves... 547 e-154
gb|BE357192.1|BE357192 DG1_147_C11.g1_A002 Dark Grown 1 (DG... 545 e-153
gb|CX607684.1|CX607684 ANR1_30_D07.b1_A002 Anaerobic roots ... 543 e-152
gb|BG102151.1|BG102151 RHIZ2_21_D11.b1_A003 Rhizome2 (RHIZ2... 494 e-138
gb|CD231418.1|CD231418 SS1_16_B12.b1_A012 Salt-stressed see... 488 e-136
gb|BE362035.1|BE362035 DG1_83_D07.g1_A002 Dark Grown 1 (DG1... 472 e-131
gb|DN552620.1|DN552620 pSHR-RT-A-H2_H06_C378 pSHR Sorghum h... 458 e-127
gb|BI643593.1|BI643593 DG1_90_D10.b1_A002 Dark Grown 1 (DG1... 456 e-126
gb|BE356126.1|BE356126 DG1_122_H01.g1_A002 Dark Grown 1 (DG... 454 e-126
gb|BG103221.1|BG103221 RHIZ2_19_F10.g1_A003 Rhizome2 (RHIZ2... 454 e-126
gb|CN145659.1|CN145659 WOUND1_34_A02.g1_A002 Wounded leaves... 446 e-123
gb|BE356626.1|BE356626 DG1_126_E08.g1_A002 Dark Grown 1 (DG... 438 e-121
gb|BF655766.1|BF655766 FM1_48_H07.b1_A003 Floral-Induced Me... 436 e-120
gb|CN125431.1|CN125431 RHOH1_11_B11.b1_A002 Acid- and alkal... 432 e-119
gb|CN125511.1|CN125511 RHOH1_11_B11.g1_A002 Acid- and alkal... 432 e-119
gb|CN152509.1|CN152509 WOUND1_82_B08.g1_A002 Wounded leaves... 432 e-119
gb|DN552618.1|DN552618 pSHR-RT-A-H2_B03_C378 pSHR Sorghum h... 432 e-119
gb|BE362905.2|BE362905 DG1_90_G10.g1_A002 Dark Grown 1 (DG1... 424 e-117
gb|BQ656120.1|BQ656120 pRC1113 Sorghum halepense rhizome cD... 424 e-117
gb|BE355160.1|BE355160 DG1_10_E09.g1_A002 Dark Grown 1 (DG1... 422 e-116
gb|BE359780.1|BE359780 DG1_57_A01.g2_A002 Dark Grown 1 (DG1... 422 e-116
gb|BE356953.1|BE356953 DG1_145_G07.g1_A002 Dark Grown 1 (DG... 420 e-115
gb|BG101917.1|BG101917 RHIZ2_21_D11.g1_A003 Rhizome2 (RHIZ2... 420 e-115
gb|BE357804.1|BE357804 DG1_22_B11.g1_A002 Dark Grown 1 (DG1... 416 e-114
gb|BE360960.1|BE360960 DG1_68_B10.g1_A002 Dark Grown 1 (DG1... 416 e-114
gb|CW022257.1|CW022257 104_161_10431735_5_30007 Sorghum met... 410 e-112
gb|CD428865.1|CD428865 ETH1_1_F11.b1_A002 Ethylene-treated ... 408 e-112
gb|BE363142.1|BE363142 DG1_9_D06.g1_A002 Dark Grown 1 (DG1)... 406 e-111
gb|CN140650.1|CN140650 OX1_45_F02.g1_A002 Oxidatively-stres... 402 e-110
gb|CW485013.1|CW485013 fsbb001f247i06k0 Sorghum methylation... 396 e-108
gb|AW285562.2|AW285562 LG1_245_C12.g1_A002 Light Grown 1 (L... 396 e-108
gb|AW923129.1|AW923129 DG1_49_C12.g1_A002 Dark Grown 1 (DG1... 394 e-108
gb|CD230932.1|CD230932 SS1_7_H07.b1_A012 Salt-stressed seed... 381 e-103
gb|BG102635.1|BG102635 RHIZ2_35_D09.g1_A003 Rhizome2 (RHIZ2... 377 e-102
gb|CD233135.1|CD233135 SS1_12_H02.b1_A012 Salt-stressed see... 377 e-102
gb|AW285553.2|AW285553 LG1_245_B12.g1_A002 Light Grown 1 (L... 375 e-102
gb|CD235247.1|CD235247 SS1_28_C11.b1_A012 Salt-stressed see... 375 e-102
gb|BE355636.1|BE355636 DG1_115_C05.g1_A002 Dark Grown 1 (DG... 373 e-101
gb|BE361412.1|BE361412 DG1_71_A02.g1_A002 Dark Grown 1 (DG1... 373 e-101
gb|BG103544.1|BG103544 RHIZ2_37_G11.g1_A003 Rhizome2 (RHIZ2... 373 e-101
gb|AW285550.2|AW285550 LG1_245_A12.g1_A002 Light Grown 1 (L... 373 e-101
gb|BE361040.1|BE361040 DG1_69_C10.b1_A002 Dark Grown 1 (DG1... 367 1e-099
gb|BE362539.1|BE362539 DG1_87_B05.b1_A002 Dark Grown 1 (DG1... 367 1e-099
gb|CD231429.1|CD231429 SS1_16_A12.b1_A012 Salt-stressed see... 367 1e-099
gb|CN132891.1|CN132891 OX1_8_G11.g1_A002 Oxidatively-stress... 365 6e-099
gb|BE126083.1|BE126083 DG1_65_H08.g1_A002 Dark Grown 1 (DG1... 361 9e-098
gb|BG102577.1|BG102577 RHIZ2_34_G04.g1_A003 Rhizome2 (RHIZ2... 361 9e-098
gb|BE361921.1|BE361921 DG1_83_D07.b1_A002 Dark Grown 1 (DG1... 359 4e-097
gb|CN132806.1|CN132806 OX1_8_G11.b1_A002 Oxidatively-stress... 359 4e-097
gb|CB928779.1|CB928779 ABA1_24_G07.b1_A012 Abscisic acid-tr... 357 1e-096
gb|AW676693.1|AW676693 DG1_13_G09.g1_A002 Dark Grown 1 (DG1... 355 6e-096
gb|BG102063.1|BG102063 RHIZ2_24_D05.g1_A003 Rhizome2 (RHIZ2... 355 6e-096
gb|CW239928.1|CW239928 104_698_11217926_148_37424_057 Sorgh... 353 2e-095
gb|BG052517.1|BG052517 RHIZ2_26_B07.g1_A003 Rhizome2 (RHIZ2... 353 2e-095
gb|BG158617.1|BG158617 RHIZ2_42_G10.g1_A003 Rhizome2 (RHIZ2... 353 2e-095
gb|CF427900.1|CF427900 PH1_11_B05.g1_A002 Phosphorous-defic... 351 9e-095
gb|CD230380.1|CD230380 SS1_43_G05.b1_A012 Salt-stressed see... 349 3e-094
gb|AI724144.1|AI724144 RHIZ1_7_D05.y2_A001 Rhizome1 (RHIZ1)... 337 1e-090
gb|CN132563.1|CN132563 OX1_6_H11.g1_A002 Oxidatively-stress... 335 5e-090
gb|CD234054.1|CD234054 SS1_6_A12.b1_A012 Salt-stressed seed... 333 2e-089
gb|BF586801.1|BF586801 FM1_30_E04.g1_A003 Floral-Induced Me... 323 2e-086
gb|BE359762.1|BE359762 DG1_56_B06.g2_A002 Dark Grown 1 (DG1... 303 2e-080
gb|BE355989.1|BE355989 DG1_121_F09.b1_A002 Dark Grown 1 (DG... 295 4e-078
gb|AW671243.1|AW671243 LG1_333_B10.b1_A002 Light Grown 1 (L... 293 2e-077
gb|CX620440.1|CX620440 GABR1_51_H01.g1_A002 GA- or brassino... 293 2e-077
gb|BE356869.1|BE356869 DG1_145_G07.b1_A002 Dark Grown 1 (DG... 283 2e-074
gb|BG559665.1|BG559665 RHIZ2_72_B05.g1_A003 Rhizome2 (RHIZ2... 262 6e-068
gb|CD231507.1|CD231507 SS1_16_B12.g1_A012 Salt-stressed see... 262 6e-068
gb|CW239927.1|CW239927 104_698_11217926_116_37423_057 Sorgh... 252 6e-065
gb|CD233719.1|CD233719 SS1_3_F11.g1_A012 Salt-stressed seed... 248 9e-064
gb|BG158926.1|BG158926 RHIZ2_42_E03.b1_A003 Rhizome2 (RHIZ2... 242 6e-062
gb|CD234142.1|CD234142 SS1_6_A12.g1_A012 Salt-stressed seed... 238 9e-061
gb|CD233230.1|CD233230 SS1_12_H02.g1_A012 Salt-stressed see... 232 6e-059
gb|AW923651.1|AW923651 DG1_57_A01.g1_A002 Dark Grown 1 (DG1... 230 2e-058
gb|CD231023.1|CD231023 SS1_7_H07.g1_A012 Salt-stressed seed... 230 2e-058
gb|AI724006.1|AI724006 RHIZ1_27_C02.y1_A001 Rhizome1 (RHIZ1... 228 9e-058
gb|CB928880.1|CB928880 ABA1_24_G07.g1_A012 Abscisic acid-tr... 224 1e-056
gb|BF587578.1|BF587578 FM1_38_B06.g1_A003 Floral-Induced Me... 222 5e-056
gb|BF655509.1|BF655509 FM1_48_A12.g1_A003 Floral-Induced Me... 220 2e-055
gb|BG052246.1|BG052246 RHIZ2_12_A05.g1_A003 Rhizome2 (RHIZ2... 220 2e-055
gb|BG559879.1|BG559879 RHIZ2_74_G02.g1_A003 Rhizome2 (RHIZ2... 220 2e-055
gb|CF073212.1|CF073212 FE1_28_G01.g1_A002 Iron-deficient se... 220 2e-055
gb|CN132478.1|CN132478 OX1_6_H11.b1_A002 Oxidatively-stress... 220 2e-055
gb|BE359712.1|BE359712 DG1_56_B06.b2_A002 Dark Grown 1 (DG1... 212 5e-053
gb|BG103468.1|BG103468 RHIZ2_37_A03.g1_A003 Rhizome2 (RHIZ2... 208 8e-052
gb|CW485012.1|CW485012 fsbb001f247i06f0 Sorghum methylation... 206 3e-051
gb|BE362899.2|BE362899 DG1_90_D10.g1_A002 Dark Grown 1 (DG1... 204 1e-050
gb|CF427832.1|CF427832 PH1_11_B05.b1_A002 Phosphorous-defic... 204 1e-050
gb|BG101900.1|BG101900 RHIZ2_21_C04.g1_A003 Rhizome2 (RHIZ2... 200 2e-049
gb|AI724109.1|AI724109 RHIZ1_6_C09.y2_A001 Rhizome1 (RHIZ1)... 192 5e-047
gb|AI724332.1|AI724332 RHIZ1_34_F04.y1_A001 Rhizome1 (RHIZ1... 192 5e-047
gb|AW563635.1|AW563635 LG1_245_C12.b1_A002 Light Grown 1 (L... 192 5e-047
gb|AW563636.1|AW563636 LG1_245_B12.b1_A002 Light Grown 1 (L... 192 5e-047
gb|BG558524.1|BG558524 RHIZ2_56_H05.g1_A003 Rhizome2 (RHIZ2... 192 5e-047
gb|BI643629.1|BI643629 DG1_92_C05.b1_A002 Dark Grown 1 (DG1... 192 5e-047
gb|CD230403.1|CD230403 SS1_43_G05.g1_A012 Salt-stressed see... 192 5e-047
gb|BE362600.1|BE362600 DG1_87_B05.g1_A002 Dark Grown 1 (DG1... 190 2e-046
gb|AI724405.1|AI724405 RHIZ1_36_C09.y2_A001 Rhizome1 (RHIZ1... 184 1e-044
gb|CD231449.1|CD231449 SS1_16_A12.g1_A012 Salt-stressed see... 184 1e-044
gb|BE126204.1|BE126204 DG1_68_B10.b1_A002 Dark Grown 1 (DG1... 178 7e-043
gb|AI724761.1|AI724761 RHIZ1_26_G11.y2_A001 Rhizome1 (RHIZ1... 170 2e-040
gb|BE362822.1|BE362822 DG1_89_C04.g2_A002 Dark Grown 1 (DG1... 170 2e-040
gb|BE357137.1|BE357137 DG1_147_C11.b1_A002 Dark Grown 1 (DG... 165 1e-038
gb|CX620354.1|CX620354 GABR1_51_H01.b1_A002 GA- or brassino... 165 1e-038
gb|CD235267.1|CD235267 SS1_28_C11.g1_A012 Salt-stressed see... 161 2e-037
gb|BG103396.1|BG103396 RHIZ2_19_F10.b1_A003 Rhizome2 (RHIZ2... 159 7e-037
gb|CD429000.1|CD429000 ETH1_1_F11.g1_A002 Ethylene-treated ... 159 7e-037
gb|BG158590.1|BG158590 RHIZ2_42_E03.g1_A003 Rhizome2 (RHIZ2... 151 2e-034
gb|AW923646.1|AW923646 DG1_56_B06.g1_A002 Dark Grown 1 (DG1... 145 1e-032
gb|BE361278.1|BE361278 DG1_71_A02.b1_A002 Dark Grown 1 (DG1... 143 4e-032
gb|BE363056.1|BE363056 DG1_9_D06.b1_A002 Dark Grown 1 (DG1)... 143 4e-032
gb|BE356569.1|BE356569 DG1_126_E08.b1_A002 Dark Grown 1 (DG... 141 2e-031
gb|CB928364.1|CB928364 ABA1_15_D02.b1_A012 Abscisic acid-tr... 133 4e-029
gb|BE362875.2|BE362875 DG1_90_G10.b1_A002 Dark Grown 1 (DG1... 129 6e-028
gb|AI724755.1|AI724755 RHIZ1_26_F12.y2_A001 Rhizome1 (RHIZ1... 127 2e-027
gb|AW284272.1|AW284272 LG1_268_H08.g1_A002 Light Grown 1 (L... 127 2e-027
gb|BG102959.1|BG102959 RHIZ2_35_D09.b1_A003 Rhizome2 (RHIZ2... 123 4e-026
gb|BG103871.1|BG103871 RHIZ2_37_G11.b1_A003 Rhizome2 (RHIZ2... 123 4e-026
gb|BE355585.1|BE355585 DG1_115_C05.b1_A002 Dark Grown 1 (DG... 119 6e-025
gb|BF656391.1|BF656391 FM1_45_C03.g2_A003 Floral-Induced Me... 117 2e-024
gb|BG053559.1|BG053559 RHIZ2_10_G03.g1_A003 Rhizome2 (RHIZ2... 117 2e-024
gb|AW923116.1|AW923116 DG1_49_C12.b1_A002 Dark Grown 1 (DG1... 115 9e-024
gb|BG102283.1|BG102283 RHIZ2_24_D05.b1_A003 Rhizome2 (RHIZ2... 115 9e-024
gb|BF586680.1|BF586680 FM1_30_E04.b1_A003 Floral-Induced Me... 113 4e-023
gb|BF588132.1|BF588132 FM1_38_B06.b1_A003 Floral-Induced Me... 113 4e-023
gb|BG102133.1|BG102133 RHIZ2_21_C04.b1_A003 Rhizome2 (RHIZ2... 113 4e-023
gb|BG103453.1|BG103453 RHIZ2_20_F08.b1_A003 Rhizome2 (RHIZ2... 113 4e-023
gb|BG103799.1|BG103799 RHIZ2_37_A03.b1_A003 Rhizome2 (RHIZ2... 113 4e-023
gb|BG158953.1|BG158953 RHIZ2_42_G10.b1_A003 Rhizome2 (RHIZ2... 113 4e-023
gb|BG558809.1|BG558809 RHIZ2_56_H05.b1_A003 Rhizome2 (RHIZ2... 113 4e-023
gb|BG560266.1|BG560266 RHIZ2_72_B05.b1_A003 Rhizome2 (RHIZ2... 113 4e-023
gb|BG560467.1|BG560467 RHIZ2_74_G02.b1_A003 Rhizome2 (RHIZ2... 113 4e-023
gb|AW564337.1|AW564337 LG1_290_A07.b1_A002 Light Grown 1 (L... 107 2e-021
gb|BE126055.1|BE126055 DG1_65_H08.b1_A002 Dark Grown 1 (DG1... 107 2e-021
gb|BE355011.1|BE355011 DG1_10_E09.b1_A002 Dark Grown 1 (DG1... 107 2e-021
gb|CW022256.1|CW022256 104_161_10431735_1_30006 Sorghum met... 103 3e-020
gb|BE356204.1|BE356204 DG1_123_B01.b1_A002 Dark Grown 1 (DG... 100 5e-019
gb|AW287276.2|AW287276 LG1_268_H08.b1_A002 Light Grown 1 (L... 98 2e-018
gb|AW923572.1|AW923572 DG1_56_B06.b1_A002 Dark Grown 1 (DG1... 98 2e-018
gb|CD231477.1|CD231477 SS1_16_A06.g1_A012 Salt-stressed see... 98 2e-018
gb|CX607769.1|CX607769 ANR1_30_D07.g1_A002 Anaerobic roots ... 98 2e-018
gb|BF655717.1|BF655717 FM1_48_A12.b1_A003 Floral-Induced Me... 94 3e-017
gb|CD231390.1|CD231390 SS1_16_A06.b1_A012 Salt-stressed see... 94 3e-017
gb|BE126054.1|BE126054 DG1_65_H07.b1_A002 Dark Grown 1 (DG1... 90 5e-016
gb|AW563647.1|AW563647 LG1_245_A12.b1_A002 Light Grown 1 (L... 88 2e-015
gb|BE356039.1|BE356039 DG1_121_F09.g1_A002 Dark Grown 1 (DG... 86 8e-015
gb|BG051646.1|BG051646 FM1_59_D03.g1_A003 Floral-Induced Me... 86 8e-015
gb|BE359711.1|BE359711 DG1_56_B07.b2_A002 Dark Grown 1 (DG1... 84 3e-014
gb|BG558988.1|BG558988 RHIZ2_53_C01.g1_A003 Rhizome2 (RHIZ2... 78 2e-012
gb|CN140084.1|CN140084 OX1_34_A10.b1_A002 Oxidatively-stres... 52 1e-004
gb|CW054101.1|CW054101 104_294_10516336_114_30182 Sorghum m... 46 0.007
gb|CW231945.1|CW231945 104_681_11211395_148_37351_042 Sorgh... 46 0.007
gb|CW350068.1|CW350068 fsbb001f011d07k0 Sorghum methylation... 46 0.007
gb|BG102899.1|BG102899 RHIZ2_34_G04.b1_A003 Rhizome2 (RHIZ2... 46 0.007
gb|BF704743.1|BF704743 FM1_51_A04.b1_A003 Floral-Induced Me... 44 0.027
gb|CD209162.1|CD209162 HS1_46_E07.g1_A012 Heat-shocked seed... 40 0.42
>gb|DN551708.1|DN551708 pSPR-L_F12_C225 pSPR Sorghum propinquum cDNA, mRNA sequence
Length = 1409
Score = 737 bits (372), Expect = 0.0
Identities = 687/792 (86%)
Strand = Plus / Minus
Query: 11 tcctacctcctggtggaaggcatccctcacgaggaccacatgaaccacacctctttcgtg 70
||||||||||||||||| |||||||||||||||| ||||| |||||||||||| | |||
Sbjct: 1068 tcctacctcctggtggacggcatccctcacgaggtgcacatcaaccacacctctctggtg 1009
Query: 71 ctcacctgcacctcgtcgcgctacatcgagccggcaatagggctggccgagtggttcagg 130
||||||||||||||| |||||||| |||| |||| | ||| |||| |||||||||| |
Sbjct: 1008 ctcacctgcacctcgacgcgctacctcgacgcggcgctggggttggcagagtggttcaag 949
Query: 131 aaggacacggccacgtcaccgttcgaggagctgcacggggcgactctgttccacgagagc 190
|||||| || ||| | || ||| ||||||||||||||||| |||||||||| ||||||
Sbjct: 948 aaggacgtggtgacgccgccattccaggagctgcacggggcggctctgttccatgagagc 889
Query: 191 atgggcagcctcgacgcagatttccacgacatggcgagcgacgccttggacacccacgac 250
|||| ||||||||| | |||| |||| ||||||||| ||| ||||||||| ||||||||
Sbjct: 888 atggagagcctcgacccggattaccacaacatggcgaacgaagccttggacgcccacgac 829
Query: 251 aacttcggcgtcgagatggcgctgcgggagttcagggacttgttcgaggggatccagtcc 310
||||| || | ||||| |||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 828 aactttgggattgagatcgcgctgcgggagttcagggacttgtttgaggggattcagtcc 769
Query: 311 atgacctactgctgcggtaactttggtgatgacaagggtgccagggccattgccaaggcc 370
||||| ||||||||||||| || ||||||||||||| |||||||||||||| | |||||
Sbjct: 768 atgacttactgctgcggtacctgtggtgatgacaagtttgccagggccattgtccaggcc 709
Query: 371 ttcccacacataaaatgcactgtgctggcccctcccaagatcattgccgccaaaccggct 430
| ||| ||||||||||||||||||||||| ||||| ||||| |||||| ||||||||||
Sbjct: 708 tacccgcacataaaatgcactgtgctggcacctccaaagatgattgccaacaaaccggct 649
Query: 431 gatggagtgaagataaactatgtcgaaggtgacatgttcagtttcattccacctgctcaa 490
||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 648 gatggtgtgatgataaactatgttgaaggtgacatgttcagtttcattccacctgctcaa 589
Query: 491 actgtcgtgctaaagcttgtgctgcaccacctgaccgatgaggagtgcgtcaagcttctg 550
||||| ||||||||||||||||||||||| ||| |||||||| ||||| || | |||
Sbjct: 588 actgtgatgctaaagcttgtgctgcaccactggactgatgaggactgcgtgaacatcctg 529
Query: 551 gctcaatgccggaaggcgattccttcacggaaggatggcgggaaagttataatcggtgac 610
||| ||||||||| |||||||||||||| |||||||||| |||||||| ||||||||
Sbjct: 528 gctgcatgccggaaagcgattccttcacgagaggatggcggaaaagttatcgtcggtgac 469
Query: 611 attatgattgaccactctgggcctatgctggaaactcagctcctgatggacatcggcatg 670
||| |||||||| |||||||||||||| |||||||||| ||| | |||||||| ||||||
Sbjct: 468 attgtgattgactactctgggcctatgttggaaactcacctcttaatggacattggcatg 409
Query: 671 atgaccatgacaaaaggacgacagcacgacgaaaaagaatggcgtcagctcttcaccaaa 730
|||||||||||||| ||||| || | || ||||| |||| ||| || |||||| |||
Sbjct: 408 atgaccatgacaaagggacgccaacgggatgaaaatgaatttcgtgagatcttcatgaaa 349
Query: 731 gcagggttcagcgaatacaagattctcaaggaatttggaactcgtgttgccttcgaagtc 790
|||||||||||||| || |||||| | ||| |||||||| |||||||||||||||||||
Sbjct: 348 gcagggttcagcgactataagattttaaagaaatttggagctcgtgttgccttcgaagtg 289
Query: 791 tatccgtgagat 802
||||||| ||||
Sbjct: 288 tatccgtaagat 277
Score = 44.1 bits (22), Expect = 0.027
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 968 tatgtactttgtacctgctatgttgttttaagtg 1001
||||||||||||||||||| |||| |||| ||||
Sbjct: 75 tatgtactttgtacctgctttgttattttgagtg 42
>gb|BE356245.1|BE356245 DG1_123_B01.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 695
Score = 583 bits (294), Expect = e-164
Identities = 519/594 (87%)
Strand = Plus / Plus
Query: 209 gatttccacgacatggcgagcgacgccttggacacccacgacaacttcggcgtcgagatg 268
|||| |||| ||||||||| ||| ||||||||| ||||||||||||| || | |||||
Sbjct: 28 gattaccacaacatggcgaacgaagccttggacgcccacgacaactttgggattgagatc 87
Query: 269 gcgctgcgggagttcagggacttgttcgaggggatccagtccatgacctactgctgcggt 328
|||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 88 gcgctgcgggagttcagggacttgtttgaggggattcagtccatgacttactgctgcggt 147
Query: 329 aactttggtgatgacaagggtgccagggccattgccaaggccttcccacacataaaatgc 388
| || ||||||||||||| |||||||||||||| | |||||| ||| ||||||||||||
Sbjct: 148 acctgtggtgatgacaagtttgccagggccattgtccaggcctacccgcacataaaatgc 207
Query: 389 actgtgctggcccctcccaagatcattgccgccaaaccggctgatggagtgaagataaac 448
||||||||||| ||||| ||||| |||||| ||||||||||||||| |||| |||||||
Sbjct: 208 actgtgctggcacctccaaagatgattgccaacaaaccggctgatggggtgatgataaac 267
Query: 449 tatgtcgaaggtgacatgttcagtttcattccacctgctcaaactgtcgtgctaaagctt 508
||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 268 tatgttgaaggtgacatgttcagtttcatcccacctgctcaaactgtgatgctaaagctt 327
Query: 509 gtgctgcaccacctgaccgatgaggagtgcgtcaagcttctggctcaatgccggaaggcg 568
|||||||||||| ||| |||||||| ||||| || | |||||| |||||||||||||
Sbjct: 328 gtgctgcaccactggactgatgaggactgcgtgaacatcctggctgcatgccggaaggcg 387
Query: 569 attccttcacggaaggatggcgggaaagttataatcggtgacattatgattgaccactct 628
||||||||||| |||||||||| |||||||| ||||||||||| ||||||| |||||
Sbjct: 388 attccttcacgagaggatggcggaaaagttatcgtcggtgacattgtgattgattactct 447
Query: 629 gggcctatgctggaaactcagctcctgatggacatcggcatgatgaccatgacaaaagga 688
||||||||| |||||||||| ||| | |||||||| ||||||||||||||||||||||||
Sbjct: 448 gggcctatgttggaaactcacctcttaatggacattggcatgatgaccatgacaaaagga 507
Query: 689 cgacagcacgacgaaaaagaatggcgtcagctcttcaccaaagcagggttcagcgaatac 748
|| || | || ||||| |||| ||| || |||||| ||||||||||||||||| ||
Sbjct: 508 cgccaacgggatgaaaatgaatttcgtgagatcttcatgaaagcagggttcagcgactat 567
Query: 749 aagattctcaaggaatttggaactcgtgttgccttcgaagtctatccgtgagat 802
|||||| | ||| |||||||| ||||||||||||||||||| ||||||| ||||
Sbjct: 568 aagattttaaagaaatttggagctcgtgttgccttcgaagtgtatccgtaagat 621
>gb|DN552619.1|DN552619 pSHR-RT-A-H2_C11_C378 pSHR Sorghum halepense cDNA, mRNA sequence
Length = 863
Score = 569 bits (287), Expect = e-160
Identities = 506/579 (87%)
Strand = Plus / Minus
Query: 224 gcgagcgacgccttggacacccacgacaacttcggcgtcgagatggcgctgcgggagttc 283
|||| ||| ||||||||| ||||||||||||| || | ||||| |||||||||||||||
Sbjct: 863 gcgaacgaagccttggacgcccacgacaactttgggattgagatcgcgctgcgggagttc 804
Query: 284 agggacttgttcgaggggatccagtccatgacctactgctgcggtaactttggtgatgac 343
||||||||||| |||||||| ||||||||||| ||||||||||||| || ||||||||||
Sbjct: 803 agggacttgtttgaggggattcagtccatgacttactgctgcggtacctgtggtgatgac 744
Query: 344 aagggtgccagggccattgccaaggccttcccacacataaaatgcactgtgctggcccct 403
||| |||||||||||||| | |||||| ||| ||||||||||||||||||||||| |||
Sbjct: 743 aagtttgccagggccattgtccaggcctacccgcacataaaatgcactgtgctggcacct 684
Query: 404 cccaagatcattgccgccaaaccggctgatggagtgaagataaactatgtcgaaggtgac 463
|| ||||| |||||| ||||||||||||||| |||| |||||||||||| |||||||||
Sbjct: 683 ccaaagatgattgccaacaaaccggctgatggggtgatgataaactatgttgaaggtgac 624
Query: 464 atgttcagtttcattccacctgctcaaactgtcgtgctaaagcttgtgctgcaccacctg 523
|||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||| |
Sbjct: 623 atgttcagtttcatcccacctgctcaaactgtgatgctaaagcttgtgctgcatcactgg 564
Query: 524 accgatgaggagtgcgtcaagcttctggctcaatgccggaaggcgattccttcacggaag 583
|| |||||||| ||||| || | |||||| |||||||||||||||||||||||| ||
Sbjct: 563 actgatgaggactgcgtgaacatcctggctgcatgccggaaggcgattccttcacgagag 504
Query: 584 gatggcgggaaagttataatcggtgacattatgattgaccactctgggcctatgctggaa 643
|||||||| |||||||| ||||||||||| |||||||| |||||||||||||| |||||
Sbjct: 503 gatggcggaaaagttatcgtcggtgacattgtgattgactactctgggcctatgttggaa 444
Query: 644 actcagctcctgatggacatcggcatgatgaccatgacaaaaggacgacagcacgacgaa 703
||||| ||| | |||||||| |||||||||||||||||||||||||| || | || |||
Sbjct: 443 actcacctcttaatggacattggcatgatgaccatgacaaaaggacgccaacgggatgaa 384
Query: 704 aaagaatggcgtcagctcttcaccaaagcagggttcagcgaatacaagattctcaaggaa 763
|| |||| ||| || |||||| ||||||||||||||||| || |||||| | ||| ||
Sbjct: 383 aatgaatttcgtgagatcttcatgaaagcagggttcagcgactataagattttaaagaaa 324
Query: 764 tttggaactcgtgttgccttcgaagtctatccgtgagat 802
|||||| ||||||||||||||||||| ||||||| ||||
Sbjct: 323 tttggagctcgtgttgccttcgaagtgtatccgtaagat 285
Score = 52.0 bits (26), Expect = 1e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 968 tatgtactttgtacctgctatgttgttttaagtg 1001
||||||||||||||||||| |||| |||||||||
Sbjct: 90 tatgtactttgtacctgctttgttattttaagtg 57
>gb|CN152433.1|CN152433 WOUND1_82_B08.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_82_B08_A002 3', mRNA sequence
Length = 831
Score = 547 bits (276), Expect = e-154
Identities = 474/540 (87%)
Strand = Plus / Plus
Query: 263 gagatggcgctgcgggagttcagggacttgttcgaggggatccagtccatgacctactgc 322
||||| |||||||||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 16 gagatcgcgctgcgggagttcagggacttgtttgaggggattcagtccatgacttactgc 75
Query: 323 tgcggtaactttggtgatgacaagggtgccagggccattgccaaggccttcccacacata 382
||||||| || ||||||||||||| |||||||||||||| | |||||| ||| ||||||
Sbjct: 76 tgcggtacctgtggtgatgacaagtttgccagggccattgtccaggcctacccgcacata 135
Query: 383 aaatgcactgtgctggcccctcccaagatcattgccgccaaaccggctgatggagtgaag 442
||||||||||||||||| ||||| ||||| |||||| ||||||||||||||| |||| |
Sbjct: 136 aaatgcactgtgctggcacctccgaagatgattgccaacaaaccggctgatggggtgatg 195
Query: 443 ataaactatgtcgaaggtgacatgttcagtttcattccacctgctcaaactgtcgtgcta 502
||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 196 ataaactatgttgaaggtgacatgttcagtttcatcccacctgctcaaactgtgatgcta 255
Query: 503 aagcttgtgctgcaccacctgaccgatgaggagtgcgtcaagcttctggctcaatgccgg 562
|||||||||||||||||| ||| |||||||| ||||| || | |||||| |||||||
Sbjct: 256 aagcttgtgctgcaccactggactgatgaggactgcgtgaacatcctggctgcatgccgg 315
Query: 563 aaggcgattccttcacggaaggatggcgggaaagttataatcggtgacattatgattgac 622
||||||||||||||||| |||||||||| |||||||| ||||||||||| |||||||
Sbjct: 316 aaggcgattccttcacgagaggatggcggaaaagttatcgtcggtgacattgtgattgat 375
Query: 623 cactctgggcctatgctggaaactcagctcctgatggacatcggcatgatgaccatgaca 682
|||||||||||||| |||||||||| ||| | |||||||| ||||||||||||||||||
Sbjct: 376 tactctgggcctatgttggaaactcacctcttaatggacattggcatgatgaccatgaca 435
Query: 683 aaaggacgacagcacgacgaaaaagaatggcgtcagctcttcaccaaagcagggttcagc 742
|||||||| || | || ||||| |||| ||| || |||||| |||||||||||||||
Sbjct: 436 aaaggacgccaacgggatgaaaatgaatttcgtgagatcttcatgaaagcagggttcagc 495
Query: 743 gaatacaagattctcaaggaatttggaactcgtgttgccttcgaagtctatccgtgagat 802
|| || |||||| | ||| |||||||| ||||||||||||||||||| ||||||| ||||
Sbjct: 496 gactataagattttaaagaaatttggagctcgtgttgccttcgaagtgtatccgtaagat 555
Score = 52.0 bits (26), Expect = 1e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 968 tatgtactttgtacctgctatgttgttttaagtg 1001
||||||||||||||||||| |||| |||||||||
Sbjct: 750 tatgtactttgtacctgctttgttattttaagtg 783
>gb|BE357192.1|BE357192 DG1_147_C11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 735
Score = 545 bits (275), Expect = e-153
Identities = 473/539 (87%)
Strand = Plus / Plus
Query: 264 agatggcgctgcgggagttcagggacttgttcgaggggatccagtccatgacctactgct 323
|||| |||||||||||||||||||||||||| |||||||| ||||||||||| |||||||
Sbjct: 1 agatcgcgctgcgggagttcagggacttgtttgaggggattcagtccatgacttactgct 60
Query: 324 gcggtaactttggtgatgacaagggtgccagggccattgccaaggccttcccacacataa 383
|||||| || ||||||||||||| |||||||||||||| | |||||| ||| |||||||
Sbjct: 61 gcggtacctgtggtgatgacaagtttgccagggccattgtccaggcctacccgcacataa 120
Query: 384 aatgcactgtgctggcccctcccaagatcattgccgccaaaccggctgatggagtgaaga 443
|||||||||||||||| ||||| ||||| |||||| ||||||||||||||| |||| ||
Sbjct: 121 aatgcactgtgctggcacctccaaagatgattgccaacaaaccggctgatggggtgatga 180
Query: 444 taaactatgtcgaaggtgacatgttcagtttcattccacctgctcaaactgtcgtgctaa 503
|||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 181 taaactatgttgaaggtgacatgttcagtttcatcccacctgctcaaactgtgatgctaa 240
Query: 504 agcttgtgctgcaccacctgaccgatgaggagtgcgtcaagcttctggctcaatgccgga 563
||||||||||||||||| ||| |||||||| ||||| || | |||||| ||||||||
Sbjct: 241 agcttgtgctgcaccactggactgatgaggactgcgtgaacatcctggctgcatgccgga 300
Query: 564 aggcgattccttcacggaaggatggcgggaaagttataatcggtgacattatgattgacc 623
|||||||||||||||| |||||||||| |||||||| ||||||||||| |||||||
Sbjct: 301 aggcgattccttcacgagaggatggcggaaaagttatcgtcggtgacattgtgattgatt 360
Query: 624 actctgggcctatgctggaaactcagctcctgatggacatcggcatgatgaccatgacaa 683
|||||||||||||| |||||||||| ||| | |||||||| |||||||||||||||||||
Sbjct: 361 actctgggcctatgttggaaactcacctcttaatggacattggcatgatgaccatgacaa 420
Query: 684 aaggacgacagcacgacgaaaaagaatggcgtcagctcttcaccaaagcagggttcagcg 743
||||||| || | || ||||| |||| ||| || |||||| ||||||||||||||||
Sbjct: 421 aaggacgccaacgggatgaaaatgaatttcgtgagatcttcatgaaagcagggttcagcg 480
Query: 744 aatacaagattctcaaggaatttggaactcgtgttgccttcgaagtctatccgtgagat 802
| || |||||| | ||| |||||||| ||||||||||||||||||| ||||||| ||||
Sbjct: 481 actataagattttaaagaaatttggagctcgtgttgccttcgaagtgtatccgtaagat 539
>gb|CX607684.1|CX607684 ANR1_30_D07.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_30_D07_A002 3', mRNA sequence
Length = 784
Score = 543 bits (274), Expect = e-152
Identities = 469/534 (87%)
Strand = Plus / Plus
Query: 269 gcgctgcgggagttcagggacttgttcgaggggatccagtccatgacctactgctgcggt 328
|||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 5 gcgctgcgggagttcagggacttgtttgaggggattcagtccatgacttactgctgcggt 64
Query: 329 aactttggtgatgacaagggtgccagggccattgccaaggccttcccacacataaaatgc 388
| || ||||||||||||| |||||||||||||| | |||||| ||| ||||||||||||
Sbjct: 65 acctgtggtgatgacaagtttgccagggccattgtccaggcctacccgcacataaaatgc 124
Query: 389 actgtgctggcccctcccaagatcattgccgccaaaccggctgatggagtgaagataaac 448
||||||||||| ||||| ||||| |||||| ||||||||||||||| |||| |||||||
Sbjct: 125 actgtgctggcacctccaaagatgattgccaacaaaccggctgatggggtgatgataaac 184
Query: 449 tatgtcgaaggtgacatgttcagtttcattccacctgctcaaactgtcgtgctaaagctt 508
||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 185 tatgttgaaggtgacatgttcagtttcatcccacctgctcaaactgtgatgctaaagctt 244
Query: 509 gtgctgcaccacctgaccgatgaggagtgcgtcaagcttctggctcaatgccggaaggcg 568
|||||||||||| ||| |||||||| ||||| || | |||||| |||||||||||||
Sbjct: 245 gtgctgcaccactggactgatgaggactgcgtgaacatcctggctgcatgccggaaggcg 304
Query: 569 attccttcacggaaggatggcgggaaagttataatcggtgacattatgattgaccactct 628
||||||||||| |||||||||| |||||||| ||||||||||| ||||||| |||||
Sbjct: 305 attccttcacgagaggatggcggaaaagttatcgtcggtgacattgtgattgattactct 364
Query: 629 gggcctatgctggaaactcagctcctgatggacatcggcatgatgaccatgacaaaagga 688
||||||||| |||||||||| ||| | |||||||| ||||||||||||||||||||||||
Sbjct: 365 gggcctatgttggaaactcacctcttaatggacattggcatgatgaccatgacaaaagga 424
Query: 689 cgacagcacgacgaaaaagaatggcgtcagctcttcaccaaagcagggttcagcgaatac 748
|| || | || ||||| |||| ||| || |||||| ||||||||||||||||| ||
Sbjct: 425 cgccaacgggatgaaaatgaatttcgtgagatcttcatgaaagcagggttcagcgactat 484
Query: 749 aagattctcaaggaatttggaactcgtgttgccttcgaagtctatccgtgagat 802
|||||| | ||| |||||||| ||||||||||||||||||| ||||||| ||||
Sbjct: 485 aagattttaaagaaatttggagctcgtgttgccttcgaagtgtatccgtaagat 538
Score = 52.0 bits (26), Expect = 1e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 968 tatgtactttgtacctgctatgttgttttaagtg 1001
||||||||||||||||||| |||| |||||||||
Sbjct: 733 tatgtactttgtacctgctttgttattttaagtg 766
>gb|BG102151.1|BG102151 RHIZ2_21_D11.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 555
Score = 494 bits (249), Expect = e-138
Identities = 426/485 (87%)
Strand = Plus / Plus
Query: 11 tcctacctcctggtggaaggcatccctcacgaggaccacatgaaccacacctctttcgtg 70
||||||||||||||||| |||||||||||||||| ||||| |||||||||||| | |||
Sbjct: 68 tcctacctcctggtggacggcatccctcacgaggtgcacatcaaccacacctctctggtg 127
Query: 71 ctcacctgcacctcgtcgcgctacatcgagccggcaatagggctggccgagtggttcagg 130
||||||||||||||| |||||||| |||| |||| | ||| |||| |||||||||| |
Sbjct: 128 ctcacctgcacctcgacgcgctacctcgacgcggcgctggggttggcagagtggttcaag 187
Query: 131 aaggacacggccacgtcaccgttcgaggagctgcacggggcgactctgttccacgagagc 190
|||||| || ||| | || ||| ||||||||||||||||| |||||||||| ||||||
Sbjct: 188 aaggacgtggtgacgccgccattccaggagctgcacggggcggctctgttccatgagagc 247
Query: 191 atgggcagcctcgacgcagatttccacgacatggcgagcgacgccttggacacccacgac 250
|||| ||||||||| | |||| |||| ||||||||| ||| ||||||||| ||||||||
Sbjct: 248 atggagagcctcgacccggattaccacaacatggcgaacgaagccttggacgcccacgac 307
Query: 251 aacttcggcgtcgagatggcgctgcgggagttcagggacttgttcgaggggatccagtcc 310
||||| || | ||||| |||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 308 aactttgggattgagatcgcgctgcgggagttcagggacttgtttgaggggattcagtcc 367
Query: 311 atgacctactgctgcggtaactttggtgatgacaagggtgccagggccattgccaaggcc 370
||||| ||||||||||||| || ||||||||||||| |||||||||||||| | |||||
Sbjct: 368 atgacttactgctgcggtacctgtggtgatgacaagtttgccagggccattgtccaggcc 427
Query: 371 ttcccacacataaaatgcactgtgctggcccctcccaagatcattgccgccaaaccggct 430
| ||| ||||||||||||||||||||||| ||||| ||||| |||||| ||||||||||
Sbjct: 428 tacccgcacataaaatgcactgtgctggcacctccaaagatgattgccaacaaaccggct 487
Query: 431 gatggagtgaagataaactatgtcgaaggtgacatgttcagtttcattccacctgctcaa 490
||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 488 gatggtgtgatgataaactatgttgaaggtgacatgttcagtttcattccacctgctcaa 547
Query: 491 actgt 495
|||||
Sbjct: 548 actgt 552
>gb|CD231418.1|CD231418 SS1_16_B12.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_16_B12_A012 3', mRNA sequence
Length = 734
Score = 488 bits (246), Expect = e-136
Identities = 435/498 (87%)
Strand = Plus / Plus
Query: 305 cagtccatgacctactgctgcggtaactttggtgatgacaagggtgccagggccattgcc 364
||||||||||| ||||||||||||| || ||||||||||||| |||||||||||||| |
Sbjct: 5 cagtccatgacttactgctgcggtacctgtggtgatgacaagtttgccagggccattgtc 64
Query: 365 aaggccttcccacacataaaatgcactgtgctggcccctcccaagatcattgccgccaaa 424
|||||| ||| ||||||||||||||||||||||| ||||| ||||| |||||| ||||
Sbjct: 65 caggcctacccgcacataaaatgcactgtgctggcacctccaaagatgattgccaacaaa 124
Query: 425 ccggctgatggagtgaagataaactatgtcgaaggtgacatgttcagtttcattccacct 484
||||||||||| |||| |||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 125 ccggctgatggggtgatgataaactatgttgaaggtgacatgttcagtttcatcccacct 184
Query: 485 gctcaaactgtcgtgctaaagcttgtgctgcaccacctgaccgatgaggagtgcgtcaag 544
||||||||||| ||||||||||||||||||||||| ||| |||||||| ||||| ||
Sbjct: 185 gctcaaactgtgatgctaaagcttgtgctgcaccactggactgatgaggactgcgtgaac 244
Query: 545 cttctggctcaatgccggaaggcgattccttcacggaaggatggcgggaaagttataatc 604
| |||||| |||||||||||||||||||||||| |||||||||| |||||||| ||
Sbjct: 245 atcctggctgcatgccggaaggcgattccttcacgagaggatggcggaaaagttatcgtc 304
Query: 605 ggtgacattatgattgaccactctgggcctatgctggaaactcagctcctgatggacatc 664
||||||||| |||||||| |||||||||||||| |||||||||| ||| | ||||||||
Sbjct: 305 ggtgacattgtgattgactactctgggcctatgttggaaactcacctcttaatggacatt 364
Query: 665 ggcatgatgaccatgacaaaaggacgacagcacgacgaaaaagaatggcgtcagctcttc 724
|||||||||||||||||||||||||| || | || ||||| |||| ||| || |||||
Sbjct: 365 ggcatgatgaccatgacaaaaggacgccaacgggatgaaaatgaatttcgtgagatcttc 424
Query: 725 accaaagcagggttcagcgaatacaagattctcaaggaatttggaactcgtgttgccttc 784
| ||||||||||||||||| || |||||| | ||| |||||||| ||||||| ||||||
Sbjct: 425 atgaaagcagggttcagcgactataagattttaaagaaatttggagctcgtgtagccttc 484
Query: 785 gaagtctatccgtgagat 802
||||| ||||||| ||||
Sbjct: 485 gaagtgtatccgtaagat 502
Score = 44.1 bits (22), Expect = 0.027
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 968 tatgtactttgtacctgctatgttgttttaagtg 1001
||||||||||||||||||| |||| | |||||||
Sbjct: 697 tatgtactttgtacctgctttgttatcttaagtg 730
>gb|BE362035.1|BE362035 DG1_83_D07.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 728
Score = 472 bits (238), Expect = e-131
Identities = 434/498 (87%), Gaps = 1/498 (0%)
Strand = Plus / Plus
Query: 305 cagtccatgacctactgctgcggtaactttggtgatgacaagggtgccagggccattgcc 364
||||||||||| ||||||||||||| || ||||||||||||| |||||||||||| ||
Sbjct: 3 cagtccatgacttactgctgcggtacctgtggtgatgacaagtttgccagggccatgtcc 62
Query: 365 aaggccttcccacacataaaatgcactgtgctggcccctcccaagatcattgccgccaaa 424
| ||||| ||| ||||||||||||||||||||||| ||||| ||||| |||||| ||||
Sbjct: 63 a-ggcctacccgcacataaaatgcactgtgctggcacctccaaagatgattgccaacaaa 121
Query: 425 ccggctgatggagtgaagataaactatgtcgaaggtgacatgttcagtttcattccacct 484
||||||||||| |||| |||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 122 ccggctgatggggtgatgataaactatgttgaaggtgacatgttcagtttcatcccacct 181
Query: 485 gctcaaactgtcgtgctaaagcttgtgctgcaccacctgaccgatgaggagtgcgtcaag 544
||||||||||| ||||||||||||||||||||||| ||| |||||||| ||||| ||
Sbjct: 182 gctcaaactgtgatgctaaagcttgtgctgcaccactggactgatgaggactgcgtgaac 241
Query: 545 cttctggctcaatgccggaaggcgattccttcacggaaggatggcgggaaagttataatc 604
| |||||| |||||||||||||||||||||||| |||||||||| |||||||| ||
Sbjct: 242 atcctggctgcatgccggaaggcgattccttcacgagaggatggcggaaaagttatcgtc 301
Query: 605 ggtgacattatgattgaccactctgggcctatgctggaaactcagctcctgatggacatc 664
||||||||| ||||||| |||||||||||||| |||||||||| ||| | ||||||||
Sbjct: 302 ggtgacattgtgattgattactctgggcctatgttggaaactcacctcttaatggacatt 361
Query: 665 ggcatgatgaccatgacaaaaggacgacagcacgacgaaaaagaatggcgtcagctcttc 724
|||||||||||||||||||||||||| || | || ||||| |||| ||| || |||||
Sbjct: 362 ggcatgatgaccatgacaaaaggacgccaacgggatgaaaatgaatttcgtgagatcttc 421
Query: 725 accaaagcagggttcagcgaatacaagattctcaaggaatttggaactcgtgttgccttc 784
| ||||||||||||||||| || |||||| | ||| |||||||| ||||||||||||||
Sbjct: 422 atgaaagcagggttcagcgactataagattttaaagaaatttggagctcgtgttgccttc 481
Query: 785 gaagtctatccgtgagat 802
||||| ||||||| ||||
Sbjct: 482 gaagtgtatccgtaagat 499
Score = 44.1 bits (22), Expect = 0.027
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 968 tatgtactttgtacctgctatgttgtttta 997
||||||||||||||||||| |||| |||||
Sbjct: 694 tatgtactttgtacctgctttgttatttta 723
>gb|DN552620.1|DN552620 pSHR-RT-A-H2_H06_C378 pSHR Sorghum halepense cDNA, mRNA sequence
Length = 790
Score = 458 bits (231), Expect = e-127
Identities = 424/487 (87%), Gaps = 1/487 (0%)
Strand = Plus / Plus
Query: 317 tactgctgcggtaactttggtgatg-acaagggtgccagggccattgccaaggccttccc 375
||||||||||||| || ||||| || ||||| |||||||||||||| | |||||| |||
Sbjct: 4 tactgctgcggtacctgtggtgctgtacaagtttgccagggccattgtccaggcctaccc 63
Query: 376 acacataaaatgcactgtgctggcccctcccaagatcattgccgccaaaccggctgatgg 435
||||||||||||||||||||||| ||||| ||||| |||||| |||||||||||||||
Sbjct: 64 gcacataaaatgcactgtgctggcacctccaaagatgattgccaacaaaccggctgatgg 123
Query: 436 agtgaagataaactatgtcgaaggtgacatgttcagtttcattccacctgctcaaactgt 495
|||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 124 ggtgatgataaactatgttgaaggtgacatgttcagtttcatcccacctgctcaaactgt 183
Query: 496 cgtgctaaagcttgtgctgcaccacctgaccgatgaggagtgcgtcaagcttctggctca 555
||||||||||||||||||||||| ||| |||||||| ||||| || | ||||||
Sbjct: 184 gatgctaaagcttgtgctgcaccactggactgatgaggactgcgtgaacatcctggctgc 243
Query: 556 atgccggaaggcgattccttcacggaaggatggcgggaaagttataatcggtgacattat 615
|||||||||||||||||||||||| |||||||||| |||||||| ||||||||||| |
Sbjct: 244 atgccggaaggcgattccttcacgagaggatggcggaaaagttatcgtcggtgacattgt 303
Query: 616 gattgaccactctgggcctatgctggaaactcagctcctgatggacatcggcatgatgac 675
||||||| |||||||||||||| |||||||||| ||| | |||||||| |||||||||||
Sbjct: 304 gattgactactctgggcctatgttggaaactcacctcttaatggacattggcatgatgac 363
Query: 676 catgacaaaaggacgacagcacgacgaaaaagaatggcgtcagctcttcaccaaagcagg 735
||||||||||||||| || | || ||||| |||| ||| || |||||| ||||||||
Sbjct: 364 catgacaaaaggacgccaacgggatgaaaatgaatttcgtgagatcttcatgaaagcagg 423
Query: 736 gttcagcgaatacaagattctcaaggaatttggaactcgtgttgccttcgaagtctatcc 795
||||||||| || |||||| | ||| |||||||| ||||||||||||||||||| |||||
Sbjct: 424 gttcagcgactataagattttaaagaaatttggagctcgtgttgccttcgaagtgtatcc 483
Query: 796 gtgagat 802
|| ||||
Sbjct: 484 gtaagat 490
Score = 52.0 bits (26), Expect = 1e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 968 tatgtactttgtacctgctatgttgttttaagtg 1001
||||||||||||||||||| |||| |||||||||
Sbjct: 685 tatgtactttgtacctgctttgttattttaagtg 718
>gb|BI643593.1|BI643593 DG1_90_D10.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 552
Score = 456 bits (230), Expect = e-126
Identities = 464/542 (85%)
Strand = Plus / Plus
Query: 29 ggcatccctcacgaggaccacatgaaccacacctctttcgtgctcacctgcacctcgtcg 88
||||||||||| |||| ||||| ||||||||||| | |||||||||||||||||| ||
Sbjct: 11 ggcatccctcatgaggtgcacatcaaccacacctccctggtgctcacctgcacctcgacg 70
Query: 89 cgctacatcgagccggcaatagggctggccgagtggttcaggaaggacacggccacgtca 148
|||||| |||| |||| | ||| |||| |||||||||| ||||||| || ||| |
Sbjct: 71 cgctacctcgacgcggcgctggggttggcagagtggttcaagaaggacgtggtgacgccg 130
Query: 149 ccgttcgaggagctgcacggggcgactctgttccacgagagcatgggcagcctcgacgca 208
|| ||| ||||||||||||||||| |||||||||| |||||||||| ||||||||| |
Sbjct: 131 ccattccaggagctgcacggggcggctctgttccatgagagcatggagagcctcgacccg 190
Query: 209 gatttccacgacatggcgagcgacgccttggacacccacgacaacttcggcgtcgagatg 268
|||| |||| ||||||||| ||| ||||||||| ||||||||||||| || | |||||
Sbjct: 191 gattaccacaacatggcgaacgaagccttggacgcccacgacaactttgggattgagatc 250
Query: 269 gcgctgcgggagttcagggacttgttcgaggggatccagtccatgacctactgctgcggt 328
|||||||||||||||| ||||||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 251 gcgctgcgggagttcaaggacttgtttgaggggattcagtccatgacttactgctgcggt 310
Query: 329 aactttggtgatgacaagggtgccagggccattgccaaggccttcccacacataaaatgc 388
| || ||||||||||||| |||||||||||||| | | |||| ||| ||||||||||||
Sbjct: 311 acctgtggtgatgacaagtttgccagggccattgtccatgcctacccgcacataaaatgc 370
Query: 389 actgtgctggcccctcccaagatcattgccgccaaaccggctgatggagtgaagataaac 448
||||||||||| ||||| ||||| |||||| ||||||||||||||| |||| |||||||
Sbjct: 371 actgtgctggcacctccaaagatgattgccaacaaaccggctgatggggtgatgataaac 430
Query: 449 tatgtcgaaggtgacatgttcagtttcattccacctgctcaaactgtcgtgctaaagctt 508
|||| |||||||||||||||| |||||| ||||||||||||||||| |||||||||||
Sbjct: 431 tatgctgaaggtgacatgttcactttcatcccacctgctcaaactgtgatgctaaagctt 490
Query: 509 gtgctgcaccacctgaccgatgaggagtgcgtcaagcttctggctcaatgccggaaggcg 568
| |||||||||| ||| |||||||| ||||| || | |||||| |||||||||||||
Sbjct: 491 gagctgcaccactggactgatgaggactgcgtgaacatcctggctgcatgccggaaggcg 550
Query: 569 at 570
||
Sbjct: 551 at 552
>gb|BE356126.1|BE356126 DG1_122_H01.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 717
Score = 454 bits (229), Expect = e-126
Identities = 409/469 (87%)
Strand = Plus / Plus
Query: 334 tggtgatgacaagggtgccagggccattgccaaggccttcccacacataaaatgcactgt 393
||||||||||||| |||||||||||||| | |||||| ||| |||||||||||||||||
Sbjct: 2 tggtgatgacaagtttgccagggccattgtccaggcctacccgcacataaaatgcactgt 61
Query: 394 gctggcccctcccaagatcattgccgccaaaccggctgatggagtgaagataaactatgt 453
|||||| ||||| ||||| |||||| ||||||||||||||| |||| ||||||||||||
Sbjct: 62 gctggcacctccaaagatgattgccaacaaaccggctgatggggtgatgataaactatgt 121
Query: 454 cgaaggtgacatgttcagtttcattccacctgctcaaactgtcgtgctaaagcttgtgct 513
||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 122 tgaaggtgacatgttcagtttcatcccacctgctcaaactgtgatgctaaagcttgtgct 181
Query: 514 gcaccacctgaccgatgaggagtgcgtcaagcttctggctcaatgccggaaggcgattcc 573
||||||| ||| |||||||| ||||| || | |||||| ||||||||||||||||||
Sbjct: 182 gcaccactggactgatgaggactgcgtgaacatcctggctgcatgccggaaggcgattcc 241
Query: 574 ttcacggaaggatggcgggaaagttataatcggtgacattatgattgaccactctgggcc 633
|||||| |||||||||| |||||||| ||||||||||| ||||||| ||||||||||
Sbjct: 242 ttcacgagaggatggcggaaaagttatcgtcggtgacattgtgattgattactctgggcc 301
Query: 634 tatgctggaaactcagctcctgatggacatcggcatgatgaccatgacaaaaggacgaca 693
|||| |||||||||| ||| | |||||||| |||||||||||||||||||||||||| ||
Sbjct: 302 tatgttggaaactcacctcttaatggacattggcatgatgaccatgacaaaaggacgcca 361
Query: 694 gcacgacgaaaaagaatggcgtcagctcttcaccaaagcagggttcagcgaatacaagat 753
| || ||||| |||| ||| || |||||| ||||||||||||||||| || |||||
Sbjct: 362 acgggatgaaaatgaatttcgtgagatcttcatgaaagcagggttcagcgactataagat 421
Query: 754 tctcaaggaatttggaactcgtgttgccttcgaagtctatccgtgagat 802
| | ||| |||||||| ||||||||||||||||||| ||||||| ||||
Sbjct: 422 tttaaagaaatttggagctcgtgttgccttcgaagtgtatccgtaagat 470
Score = 52.0 bits (26), Expect = 1e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 968 tatgtactttgtacctgctatgttgttttaagtg 1001
||||||||||||||||||| |||| |||||||||
Sbjct: 665 tatgtactttgtacctgctttgttattttaagtg 698
>gb|BG103221.1|BG103221 RHIZ2_19_F10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 667
Score = 454 bits (229), Expect = e-126
Identities = 409/469 (87%)
Strand = Plus / Plus
Query: 334 tggtgatgacaagggtgccagggccattgccaaggccttcccacacataaaatgcactgt 393
||||||||||||| |||||||||||||| | |||||| ||| |||||||||||||||||
Sbjct: 8 tggtgatgacaagtttgccagggccattgtccaggcctacccgcacataaaatgcactgt 67
Query: 394 gctggcccctcccaagatcattgccgccaaaccggctgatggagtgaagataaactatgt 453
|||||| ||||| ||||| |||||| ||||||||||||||| |||| ||||||||||||
Sbjct: 68 gctggcacctccaaagatgattgccaacaaaccggctgatggtgtgatgataaactatgt 127
Query: 454 cgaaggtgacatgttcagtttcattccacctgctcaaactgtcgtgctaaagcttgtgct 513
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 128 tgaaggtgacatgttcagtttcattccacctgctcaaactgtgatgctaaagcttgtgct 187
Query: 514 gcaccacctgaccgatgaggagtgcgtcaagcttctggctcaatgccggaaggcgattcc 573
||||||| ||| |||||||| ||||| || | |||||| ||||||||| ||||||||
Sbjct: 188 gcaccactggactgatgaggactgcgtgaacatcctggctgcatgccggaaagcgattcc 247
Query: 574 ttcacggaaggatggcgggaaagttataatcggtgacattatgattgaccactctgggcc 633
|||||| |||||||||| |||||||| ||||||||||| |||||||| ||||||||||
Sbjct: 248 ttcacgagaggatggcggaaaagttatcgtcggtgacattgtgattgactactctgggcc 307
Query: 634 tatgctggaaactcagctcctgatggacatcggcatgatgaccatgacaaaaggacgaca 693
|||| |||||||||| ||| | |||||||| |||||||||||||||||||| ||||| ||
Sbjct: 308 tatgttggaaactcacctcttaatggacattggcatgatgaccatgacaaagggacgcca 367
Query: 694 gcacgacgaaaaagaatggcgtcagctcttcaccaaagcagggttcagcgaatacaagat 753
| || ||||| |||| ||| || |||||| ||||||||||||||||| || |||||
Sbjct: 368 acgggatgaaaatgaatttcgtgagatcttcatgaaagcagggttcagcgactataagat 427
Query: 754 tctcaaggaatttggaactcgtgttgccttcgaagtctatccgtgagat 802
| | ||| |||||||| ||||||||||||||||||| ||||||| ||||
Sbjct: 428 tttaaagaaatttggagctcgtgttgccttcgaagtgtatccgtaagat 476
>gb|CN145659.1|CN145659 WOUND1_34_A02.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_34_A02_A002 5', mRNA sequence
Length = 806
Score = 446 bits (225), Expect = e-123
Identities = 413/476 (86%)
Strand = Plus / Plus
Query: 11 tcctacctcctggtggaaggcatccctcacgaggaccacatgaaccacacctctttcgtg 70
||||||||||||||||| ||||||||||| |||| ||||| ||||||||||| | |||
Sbjct: 331 tcctacctcctggtggacggcatccctcatgaggtgcacatcaaccacacctccctggtg 390
Query: 71 ctcacctgcacctcgtcgcgctacatcgagccggcaatagggctggccgagtggttcagg 130
||||||||||||||| |||||||| |||| |||| | ||| |||| |||||||||| |
Sbjct: 391 ctcacctgcacctcgacgcgctacctcgacgcggcgctggggttggcagagtggttcaag 450
Query: 131 aaggacacggccacgtcaccgttcgaggagctgcacggggcgactctgttccacgagagc 190
|||||| || ||| | || ||| ||||||||||||||||| |||||||||| ||||||
Sbjct: 451 aaggacgtggtgacgccgccattccaggagctgcacggggcggctctgttccatgagagc 510
Query: 191 atgggcagcctcgacgcagatttccacgacatggcgagcgacgccttggacacccacgac 250
|||| ||||||||| | |||| |||| ||||||||| ||| ||||||||| ||||||||
Sbjct: 511 atggagagcctcgacccggattaccacaacatggcgaacgaagccttggacgcccacgac 570
Query: 251 aacttcggcgtcgagatggcgctgcgggagttcagggacttgttcgaggggatccagtcc 310
||||| || | ||||| |||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 571 aactttgggattgagatcgcgctgcgggagttcagggacttgtttgaggggattcagtcc 630
Query: 311 atgacctactgctgcggtaactttggtgatgacaagggtgccagggccattgccaaggcc 370
||||| ||||||||||||| || ||||||||||||| |||||||||||||| | |||||
Sbjct: 631 atgacttactgctgcggtacctgtggtgatgacaagtttgccagggccattgtccaggcc 690
Query: 371 ttcccacacataaaatgcactgtgctggcccctcccaagatcattgccgccaaaccggct 430
| ||| ||||||| ||||||||||||||| ||||| ||||| |||||| ||||||||||
Sbjct: 691 tacccgcacataanatgcactgtgctggcacctccaaagatgattgccaacaaaccggct 750
Query: 431 gatggagtgaagataaactatgtcgaaggtgacatgttcagtttcattccacctgc 486
||||| |||| |||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 751 gatggggtgatgataaactatgttgaaggtgacatgttcagtttcatcccacctgc 806
>gb|BE356626.1|BE356626 DG1_126_E08.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 605
Score = 438 bits (221), Expect = e-121
Identities = 408/469 (86%), Gaps = 1/469 (0%)
Strand = Plus / Plus
Query: 334 tggtgatgacaagggtgccagggccattgccaaggccttcccacacataaaatgcactgt 393
||||||||||||| |||||||||||| ||| ||||| ||| |||||||||||||||||
Sbjct: 8 tggtgatgacaagtttgccagggccatgtcca-ggcctacccgcacataaaatgcactgt 66
Query: 394 gctggcccctcccaagatcattgccgccaaaccggctgatggagtgaagataaactatgt 453
|||||| ||||| ||||| |||||| ||||||||||||||| |||| ||||||||||||
Sbjct: 67 gctggcacctccaaagatgattgccaacaaaccggctgatggggtgatgataaactatgt 126
Query: 454 cgaaggtgacatgttcagtttcattccacctgctcaaactgtcgtgctaaagcttgtgct 513
||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 127 tgaaggtgacatgttcagtttcatcccacctgctcaaactgtgatgctaaagcttgtgct 186
Query: 514 gcaccacctgaccgatgaggagtgcgtcaagcttctggctcaatgccggaaggcgattcc 573
||||||| ||| |||||||| ||||| || | |||||| ||||||||||||||||||
Sbjct: 187 gcaccactggactgatgaggactgcgtgaacatcctggctgcatgccggaaggcgattcc 246
Query: 574 ttcacggaaggatggcgggaaagttataatcggtgacattatgattgaccactctgggcc 633
|||||| |||||||||| |||||||| ||||||||||| ||||||| ||||||||||
Sbjct: 247 ttcacgagaggatggcggaaaagttatcgtcggtgacattgtgattgattactctgggcc 306
Query: 634 tatgctggaaactcagctcctgatggacatcggcatgatgaccatgacaaaaggacgaca 693
|||| |||||||||| ||| | |||||||| |||||||||||||||||||||||||| ||
Sbjct: 307 tatgttggaaactcacctcttaatggacattggcatgatgaccatgacaaaaggacgcca 366
Query: 694 gcacgacgaaaaagaatggcgtcagctcttcaccaaagcagggttcagcgaatacaagat 753
| || ||||| |||| ||| || |||||| ||||||||||||||||| || |||||
Sbjct: 367 acgggatgaaaatgaatttcgtgagatcttcatgaaagcagggttcagcgactataagat 426
Query: 754 tctcaaggaatttggaactcgtgttgccttcgaagtctatccgtgagat 802
| | ||| |||||||| ||||||||||||||||||| ||||||| ||||
Sbjct: 427 tttaaagaaatttggagctcgtgttgccttcgaagtgtatccgtaagat 475
>gb|BF655766.1|BF655766 FM1_48_H07.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 462
Score = 436 bits (220), Expect = e-120
Identities = 373/424 (87%)
Strand = Plus / Plus
Query: 156 aggagctgcacggggcgactctgttccacgagagcatgggcagcctcgacgcagatttcc 215
||||||||||||||||| |||||||||| |||||||||| ||||||||| | |||| ||
Sbjct: 31 aggagctgcacggggcggctctgttccatgagagcatggagagcctcgacccggattacc 90
Query: 216 acgacatggcgagcgacgccttggacacccacgacaacttcggcgtcgagatggcgctgc 275
|| ||||||||| ||| ||||||||| ||||||||||||| || | ||||| |||||||
Sbjct: 91 acaacatggcgaacgaagccttggacgcccacgacaactttgggattgagatcgcgctgc 150
Query: 276 gggagttcagggacttgttcgaggggatccagtccatgacctactgctgcggtaactttg 335
||||||||| ||||||||| |||||||| ||||||||||| ||||||||||||| || ||
Sbjct: 151 gggagttcaaggacttgtttgaggggattcagtccatgacttactgctgcggtacctgtg 210
Query: 336 gtgatgacaagggtgccagggccattgccaaggccttcccacacataaaatgcactgtgc 395
||||||||||| |||||||||||||| | |||||| ||| |||||||||||||||||||
Sbjct: 211 gtgatgacaagtttgccagggccattgtccaggcctacccgcacataaaatgcactgtgc 270
Query: 396 tggcccctcccaagatcattgccgccaaaccggctgatggagtgaagataaactatgtcg 455
|||| ||||| ||||| |||||| ||||||||||||||| |||| |||||||||||| |
Sbjct: 271 tggcacctccaaagatgattgccaacaaaccggctgatggtgtgatgataaactatgttg 330
Query: 456 aaggtgacatgttcagtttcattccacctgctcaaactgtcgtgctaaagcttgtgctgc 515
|||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 331 aaggtgacatgttcagttgcattccacctgctcaaactgtgatgctaaagcttgtgctgc 390
Query: 516 accacctgaccgatgaggagtgcgtcaagcttctggctcaatgccggaaggcgattcctt 575
||||| ||| |||||||| ||||| || | ||| || ||||||||| ||||||||||
Sbjct: 391 accactggactgatgaggactgcgtgaacatcctgtctgcatgccggaaagcgattcctt 450
Query: 576 cacg 579
||||
Sbjct: 451 cacg 454
>gb|CN125431.1|CN125431 RHOH1_11_B11.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_11_B11_A002 3', mRNA sequence
Length = 743
Score = 432 bits (218), Expect = e-119
Identities = 395/454 (87%)
Strand = Plus / Plus
Query: 349 tgccagggccattgccaaggccttcccacacataaaatgcactgtgctggcccctcccaa 408
|||||||||||||| | |||||| ||| ||||||||||||||||||||||| ||||| ||
Sbjct: 34 tgccagggccattgtccaggcctacccgcacataaaatgcactgtgctggcacctccaaa 93
Query: 409 gatcattgccgccaaaccggctgatggagtgaagataaactatgtcgaaggtgacatgtt 468
||| |||||| ||||||||||||||| |||| ||||| |||||| ||||||||||||||
Sbjct: 94 gatgattgccaacaaaccggctgatggggtgatgataagctatgttgaaggtgacatgtt 153
Query: 469 cagtttcattccacctgctcaaactgtcgtgctaaagcttgtgctgcaccacctgaccga 528
||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||| ||
Sbjct: 154 cagtttcatcccacctgctcaaactgtgatgctaaagcttgtgctgcaccactggactga 213
Query: 529 tgaggagtgcgtcaagcttctggctcaatgccggaaggcgattccttcacggaaggatgg 588
|||||| ||||| || | |||||| |||||||||||||||||||||||| |||||||
Sbjct: 214 tgaggactgcgtgaacatcctggctgcatgccggaaggcgattccttcacgagaggatgg 273
Query: 589 cgggaaagttataatcggtgacattatgattgaccactctgggcctatgctggaaactca 648
||| |||||||| ||||||||||| ||||||| |||||||||||||| ||||||||||
Sbjct: 274 cggaaaagttatcgtcggtgacattgtgattgattactctgggcctatgttggaaactca 333
Query: 649 gctcctgatggacatcggcatgatgaccatgacaaaaggacgacagcacgacgaaaaaga 708
||| | |||||||| |||||||||||||||||||||||||| || | || ||||| ||
Sbjct: 334 cctcttaatggacattggcatgatgaccatgacaaaaggacgccaacgggatgaaaatga 393
Query: 709 atggcgtcagctcttcaccaaagcagggttcagcgaatacaagattctcaaggaatttgg 768
|| ||| || |||||| ||||||||||||||||| || |||||| | ||| |||||||
Sbjct: 394 atttcgtgagatcttcatgaaagcagggttcagcgactataagattttaaagaaatttgg 453
Query: 769 aactcgtgttgccttcgaagtctatccgtgagat 802
| ||||||||||||||||||| ||||||| ||||
Sbjct: 454 agctcgtgttgccttcgaagtgtatccgtaagat 487
Score = 52.0 bits (26), Expect = 1e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 968 tatgtactttgtacctgctatgttgttttaagtg 1001
||||||||||||||||||| |||| |||||||||
Sbjct: 682 tatgtactttgtacctgctttgttattttaagtg 715
>gb|CN125511.1|CN125511 RHOH1_11_B11.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_11_B11_A002 5', mRNA sequence
Length = 837
Score = 432 bits (218), Expect = e-119
Identities = 395/454 (87%)
Strand = Plus / Plus
Query: 349 tgccagggccattgccaaggccttcccacacataaaatgcactgtgctggcccctcccaa 408
|||||||||||||| | |||||| ||| ||||||||||||||||||||||| ||||| ||
Sbjct: 318 tgccagggccattgtccaggcctacccgcacataaaatgcactgtgctggcacctccaaa 377
Query: 409 gatcattgccgccaaaccggctgatggagtgaagataaactatgtcgaaggtgacatgtt 468
||| |||||| ||||||||||||||| |||| ||||| |||||| ||||||||||||||
Sbjct: 378 gatgattgccaacaaaccggctgatggggtgatgataagctatgttgaaggtgacatgtt 437
Query: 469 cagtttcattccacctgctcaaactgtcgtgctaaagcttgtgctgcaccacctgaccga 528
||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||| ||
Sbjct: 438 cagtttcatcccacctgctcaaactgtgatgctaaagcttgtgctgcaccactggactga 497
Query: 529 tgaggagtgcgtcaagcttctggctcaatgccggaaggcgattccttcacggaaggatgg 588
|||||| ||||| || | |||||| |||||||||||||||||||||||| |||||||
Sbjct: 498 tgaggactgcgtgaacatcctggctgcatgccggaaggcgattccttcacgagaggatgg 557
Query: 589 cgggaaagttataatcggtgacattatgattgaccactctgggcctatgctggaaactca 648
||| |||||||| ||||||||||| ||||||| |||||||||||||| ||||||||||
Sbjct: 558 cggaaaagttatcgtcggtgacattgtgattgattactctgggcctatgttggaaactca 617
Query: 649 gctcctgatggacatcggcatgatgaccatgacaaaaggacgacagcacgacgaaaaaga 708
||| | |||||||| |||||||||||||||||||||||||| || | || ||||| ||
Sbjct: 618 cctcttaatggacattggcatgatgaccatgacaaaaggacgccaacgggatgaaaatga 677
Query: 709 atggcgtcagctcttcaccaaagcagggttcagcgaatacaagattctcaaggaatttgg 768
|| ||| || |||||| ||||||||||||||||| || |||||| | ||| |||||||
Sbjct: 678 atttcgtgagatcttcatgaaagcagggttcagcgactataagattttaaagaaatttgg 737
Query: 769 aactcgtgttgccttcgaagtctatccgtgagat 802
| ||||||||||||||||||| ||||||| ||||
Sbjct: 738 agctcgtgttgccttcgaagtgtatccgtaagat 771
>gb|CN152509.1|CN152509 WOUND1_82_B08.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_82_B08_A002 5', mRNA sequence
Length = 811
Score = 432 bits (218), Expect = e-119
Identities = 401/462 (86%)
Strand = Plus / Plus
Query: 11 tcctacctcctggtggaaggcatccctcacgaggaccacatgaaccacacctctttcgtg 70
||||||||||||||||| ||||||||||| |||| ||||| ||||||||||| | |||
Sbjct: 350 tcctacctcctggtggacggcatccctcatgaggtgcacatcaaccacacctccctggtg 409
Query: 71 ctcacctgcacctcgtcgcgctacatcgagccggcaatagggctggccgagtggttcagg 130
||||||||||||||| |||||||| |||| |||| | ||| |||| |||||||||| |
Sbjct: 410 ctcacctgcacctcgacgcgctacctcgacgcggcgctggggttggcagagtggttcaag 469
Query: 131 aaggacacggccacgtcaccgttcgaggagctgcacggggcgactctgttccacgagagc 190
|||||| || ||| | || ||| ||||||||||||||||| |||||||||| ||||||
Sbjct: 470 aaggacgtggtgacgccgccattccaggagctgcacggggcggctctgttccatgagagc 529
Query: 191 atgggcagcctcgacgcagatttccacgacatggcgagcgacgccttggacacccacgac 250
|||| ||||||||| | |||| |||| ||||||||| ||| ||||||||| ||||||||
Sbjct: 530 atggagagcctcgacccggattaccacaacatggcgaacgaagccttggacgcccacgac 589
Query: 251 aacttcggcgtcgagatggcgctgcgggagttcagggacttgttcgaggggatccagtcc 310
||||| || | ||||| |||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 590 aactttgggattgagatcgcgctgcgggagttcagggacttgtttgaggggattcagtcc 649
Query: 311 atgacctactgctgcggtaactttggtgatgacaagggtgccagggccattgccaaggcc 370
||||| ||||||||||||| || ||||||||||||| |||||||||||||| | |||||
Sbjct: 650 atgacttactgctgcggtacctgtggtgatgacaagtttgccagggccattgtccaggcc 709
Query: 371 ttcccacacataaaatgcactgtgctggcccctcccaagatcattgccgccaaaccggct 430
| ||| ||||||||||||||||||||||| ||||| ||||| |||||| ||||||||||
Sbjct: 710 tacccgcacataaaatgcactgtgctggcacctccgaagatgattgccaacaaaccggct 769
Query: 431 gatggagtgaagataaactatgtcgaaggtgacatgttcagt 472
||||| |||| |||||||||||| ||||||||||||||||||
Sbjct: 770 gatggggtgatgataaactatgttgaaggtgacatgttcagt 811
>gb|DN552618.1|DN552618 pSHR-RT-A-H2_B03_C378 pSHR Sorghum halepense cDNA, mRNA sequence
Length = 745
Score = 432 bits (218), Expect = e-119
Identities = 389/446 (87%)
Strand = Plus / Minus
Query: 357 ccattgccaaggccttcccacacataaaatgcactgtgctggcccctcccaagatcattg 416
|||||| | |||||| ||| ||||||||||||||||||||||| ||||| ||||| ||||
Sbjct: 745 ccattgtccaggcctacccgcacataaaatgcactgtgctggcacctccaaagatgattg 686
Query: 417 ccgccaaaccggctgatggagtgaagataaactatgtcgaaggtgacatgttcagtttca 476
|| ||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||
Sbjct: 685 ccaacaaaccggctgatggggtgatgataaactatgttgaaggtgacatgttcagtttca 626
Query: 477 ttccacctgctcaaactgtcgtgctaaagcttgtgctgcaccacctgaccgatgaggagt 536
| ||||||||||||||||| ||||||||||||||||||||||| ||| |||||||| |
Sbjct: 625 tcccacctgctcaaactgtgatgctaaagcttgtgctgcaccactggactgatgaggact 566
Query: 537 gcgtcaagcttctggctcaatgccggaaggcgattccttcacggaaggatggcgggaaag 596
|||| || | |||||| |||||||||||||||||||||||| |||||||||| ||||
Sbjct: 565 gcgtgaacatcctggctgcatgccggaaggcgattccttcacgagaggatggcggaaaag 506
Query: 597 ttataatcggtgacattatgattgaccactctgggcctatgctggaaactcagctcctga 656
|||| ||||||||||| |||||||| |||||||||||||| |||||||||| ||| | |
Sbjct: 505 ttatcgtcggtgacattgtgattgactactctgggcctatgttggaaactcacctcttaa 446
Query: 657 tggacatcggcatgatgaccatgacaaaaggacgacagcacgacgaaaaagaatggcgtc 716
||||||| |||||||||||||||||||||||||| || | || ||||| |||| |||
Sbjct: 445 tggacattggcatgatgaccatgacaaaaggacgccaacgggatgaaaatgaatttcgtg 386
Query: 717 agctcttcaccaaagcagggttcagcgaatacaagattctcaaggaatttggaactcgtg 776
|| |||||| ||||||||||||||||| || |||||| | ||| |||||||| ||||||
Sbjct: 385 agatcttcatgaaagcagggttcagcgactataagattttaaagaaatttggagctcgtg 326
Query: 777 ttgccttcgaagtctatccgtgagat 802
||||||||||||| ||||||| ||||
Sbjct: 325 ttgccttcgaagtgtatccgtaagat 300
Score = 52.0 bits (26), Expect = 1e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 968 tatgtactttgtacctgctatgttgttttaagtg 1001
||||||||||||||||||| |||| |||||||||
Sbjct: 105 tatgtactttgtacctgctttgttattttaagtg 72
>gb|BE362905.2|BE362905 DG1_90_G10.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 568
Score = 424 bits (214), Expect = e-117
Identities = 395/454 (87%), Gaps = 1/454 (0%)
Strand = Plus / Plus
Query: 349 tgccagggccattgccaaggccttcccacacataaaatgcactgtgctggcccctcccaa 408
|||||||||||| ||| ||||| ||| ||||||||||||||||||||||| ||||| ||
Sbjct: 5 tgccagggccatgtcca-ggcctacccgcacataaaatgcactgtgctggcacctccaaa 63
Query: 409 gatcattgccgccaaaccggctgatggagtgaagataaactatgtcgaaggtgacatgtt 468
||| |||||| ||||||||||||||| |||| |||||||||||| ||||||||||||||
Sbjct: 64 gatgattgccaacaaaccggctgatggggtgatgataaactatgttgaaggtgacatgtt 123
Query: 469 cagtttcattccacctgctcaaactgtcgtgctaaagcttgtgctgcaccacctgaccga 528
||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||| ||
Sbjct: 124 cagtttcatcccacctgctcaaactgtgatgctaaagcttgtgctgcaccactggactga 183
Query: 529 tgaggagtgcgtcaagcttctggctcaatgccggaaggcgattccttcacggaaggatgg 588
|||||| ||||| || | |||||| |||||||||||||||||||||||| |||||||
Sbjct: 184 tgaggactgcgtgaacatcctggctgcatgccggaaggcgattccttcacgagaggatgg 243
Query: 589 cgggaaagttataatcggtgacattatgattgaccactctgggcctatgctggaaactca 648
||| |||||||| ||||||||||| ||||||| |||||||||||||| ||||||||||
Sbjct: 244 cggaaaagttatcgtcggtgacattgtgattgattactctgggcctatgttggaaactca 303
Query: 649 gctcctgatggacatcggcatgatgaccatgacaaaaggacgacagcacgacgaaaaaga 708
||| | |||||||| |||||||||||||||||||||||||| || | || ||||| ||
Sbjct: 304 cctcttaatggacattggcatgatgaccatgacaaaaggacgccaacgggatgaaaatga 363
Query: 709 atggcgtcagctcttcaccaaagcagggttcagcgaatacaagattctcaaggaatttgg 768
|| ||| || |||||| ||||||||||||||||| || |||||| | ||| |||||||
Sbjct: 364 atttcgtgagatcttcatgaaagcagggttcagcgactataagattttaaagaaatttgg 423
Query: 769 aactcgtgttgccttcgaagtctatccgtgagat 802
| ||||||||||||||||||| ||||||| ||||
Sbjct: 424 agctcgtgttgccttcgaagtgtatccgtaagat 457
>gb|BQ656120.1|BQ656120 pRC1113 Sorghum halepense rhizome cDNA library Sorghum halepense
cDNA clone pRC1113, mRNA sequence
Length = 685
Score = 424 bits (214), Expect = e-117
Identities = 373/426 (87%)
Strand = Plus / Plus
Query: 377 cacataaaatgcactgtgctggcccctcccaagatcattgccgccaaaccggctgatgga 436
||||||||||||||||||||||| ||||| ||||| |||||| |||||||||||||||
Sbjct: 4 cacataaaatgcactgtgctggcacctccaaagatgattgccaacaaaccggctgatggg 63
Query: 437 gtgaagataaactatgtcgaaggtgacatgttcagtttcattccacctgctcaaactgtc 496
|||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 64 gtgatgataaactatgttgaaggtgacatgttcagtttcatcccacctgctcaaactgtg 123
Query: 497 gtgctaaagcttgtgctgcaccacctgaccgatgaggagtgcgtcaagcttctggctcaa 556
||||||||||||||||||||||| ||| |||||||| ||||| || | |||||| |
Sbjct: 124 atgctaaagcttgtgctgcaccactggactgatgaggactgcgtgaacatcctggctgca 183
Query: 557 tgccggaaggcgattccttcacggaaggatggcgggaaagttataatcggtgacattatg 616
||||||||||||||||||||||| |||||||||| |||||||| ||||||||||| ||
Sbjct: 184 tgccggaaggcgattccttcacgagaggatggcggaaaagttatcgtcggtgacattgtg 243
Query: 617 attgaccactctgggcctatgctggaaactcagctcctgatggacatcggcatgatgacc 676
|||||| |||||||||||||| |||||||||| ||| | |||||||| ||||||||||||
Sbjct: 244 attgactactctgggcctatgttggaaactcacctcttaatggacattggcatgatgacc 303
Query: 677 atgacaaaaggacgacagcacgacgaaaaagaatggcgtcagctcttcaccaaagcaggg 736
|||||||||||||| || | || ||||| |||| ||| || |||||| |||||||||
Sbjct: 304 atgacaaaaggacgccaacgggatgaaaatgaatttcgtgagatcttcatgaaagcaggg 363
Query: 737 ttcagcgaatacaagattctcaaggaatttggaactcgtgttgccttcgaagtctatccg 796
|||||||| || |||||| | ||| |||||||| ||||||||||||||||||| ||||||
Sbjct: 364 ttcagcgactataagattttaaagaaatttggagctcgtgttgccttcgaagtgtatccg 423
Query: 797 tgagat 802
| ||||
Sbjct: 424 taagat 429
Score = 52.0 bits (26), Expect = 1e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 968 tatgtactttgtacctgctatgttgttttaagtg 1001
||||||||||||||||||| |||| |||||||||
Sbjct: 631 tatgtactttgtacctgctttgttattttaagtg 664
>gb|BE355160.1|BE355160 DG1_10_E09.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 505
Score = 422 bits (213), Expect = e-116
Identities = 381/437 (87%)
Strand = Plus / Plus
Query: 366 aggccttcccacacataaaatgcactgtgctggcccctcccaagatcattgccgccaaac 425
|||||| ||| ||||||||||||||||||||||| ||||| ||||| |||||| |||||
Sbjct: 4 aggcctacccgcacataaaatgcactgtgctggcacctccaaagatgattgccaacaaac 63
Query: 426 cggctgatggagtgaagataaactatgtcgaaggtgacatgttcagtttcattccacctg 485
|||||||||| |||| |||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 64 cggctgatggggtgatgataaactatgttgaaggtgacatgttcagtttcatcccacctg 123
Query: 486 ctcaaactgtcgtgctaaagcttgtgctgcaccacctgaccgatgaggagtgcgtcaagc 545
|||||||||| ||||||||||||||||||||||| ||| |||||||| ||||| ||
Sbjct: 124 ctcaaactgtgatgctaaagcttgtgctgcaccactggactgatgaggactgcgtgaaca 183
Query: 546 ttctggctcaatgccggaaggcgattccttcacggaaggatggcgggaaagttataatcg 605
| |||||| |||||||||||||||||||||||| |||||||||| |||||||| |||
Sbjct: 184 tcctggctgcatgccggaaggcgattccttcacgagaggatggcggaaaagttatcgtcg 243
Query: 606 gtgacattatgattgaccactctgggcctatgctggaaactcagctcctgatggacatcg 665
|||||||| ||||||| |||||||||||||| |||||||||| ||| | |||||||| |
Sbjct: 244 gtgacattgtgattgattactctgggcctatgttggaaactcacctcttaatggacattg 303
Query: 666 gcatgatgaccatgacaaaaggacgacagcacgacgaaaaagaatggcgtcagctcttca 725
||||||||||||||||||||||||| || | || ||||| |||| ||| || ||||||
Sbjct: 304 gcatgatgaccatgacaaaaggacgccaacgggatgaaaatgaatttcgtgagatcttca 363
Query: 726 ccaaagcagggttcagcgaatacaagattctcaaggaatttggaactcgtgttgccttcg 785
||||||||||||||||| || |||||| | ||| |||||||| |||||||||||||||
Sbjct: 364 tgaaagcagggttcagcgactataagattttaaagaaatttggagctcgtgttgccttcg 423
Query: 786 aagtctatccgtgagat 802
|||| ||||||| ||||
Sbjct: 424 aagtgtatccgtaagat 440
>gb|BE359780.1|BE359780 DG1_57_A01.g2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 663
Score = 422 bits (213), Expect = e-116
Identities = 381/437 (87%)
Strand = Plus / Plus
Query: 366 aggccttcccacacataaaatgcactgtgctggcccctcccaagatcattgccgccaaac 425
|||||| ||| ||||||||||||||||||||||| ||||| ||||| |||||| |||||
Sbjct: 8 aggcctacccgcacataaaatgcactgtgctggcacctccaaagatgattgccaacaaac 67
Query: 426 cggctgatggagtgaagataaactatgtcgaaggtgacatgttcagtttcattccacctg 485
|||||||||| |||| |||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 68 cggctgatggggtgatgataaactatgttgaaggtgacatgttcagtttcatcccacctg 127
Query: 486 ctcaaactgtcgtgctaaagcttgtgctgcaccacctgaccgatgaggagtgcgtcaagc 545
|||||||||| ||||||||||||||||||||||| ||| |||||||| ||||| ||
Sbjct: 128 ctcaaactgtgatgctaaagcttgtgctgcaccactggactgatgaggactgcgtgaaca 187
Query: 546 ttctggctcaatgccggaaggcgattccttcacggaaggatggcgggaaagttataatcg 605
| |||||| |||||||||||||||||||||||| |||||||||| |||||||| |||
Sbjct: 188 tcctggctgcatgccggaaggcgattccttcacgagaggatggcggaaaagttatcgtcg 247
Query: 606 gtgacattatgattgaccactctgggcctatgctggaaactcagctcctgatggacatcg 665
|||||||| ||||||| |||||||||||||| |||||||||| ||| | |||||||| |
Sbjct: 248 gtgacattgtgattgattactctgggcctatgttggaaactcacctcttaatggacattg 307
Query: 666 gcatgatgaccatgacaaaaggacgacagcacgacgaaaaagaatggcgtcagctcttca 725
||||||||||||||||||||||||| || | || ||||| |||| ||| || ||||||
Sbjct: 308 gcatgatgaccatgacaaaaggacgccaacgggatgaaaatgaatttcgtgagatcttca 367
Query: 726 ccaaagcagggttcagcgaatacaagattctcaaggaatttggaactcgtgttgccttcg 785
||||||||||||||||| || |||||| | ||| |||||||| |||||||||||||||
Sbjct: 368 tgaaagcagggttcagcgactataagattttaaagaaatttggagctcgtgttgccttcg 427
Query: 786 aagtctatccgtgagat 802
|||| ||||||| ||||
Sbjct: 428 aagtgtatccgtaagat 444
>gb|BE356953.1|BE356953 DG1_145_G07.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 662
Score = 420 bits (212), Expect = e-115
Identities = 380/436 (87%)
Strand = Plus / Plus
Query: 367 ggccttcccacacataaaatgcactgtgctggcccctcccaagatcattgccgccaaacc 426
||||| ||| ||||||||||||||||||||||| ||||| ||||| |||||| ||||||
Sbjct: 1 ggcctacccgcacataaaatgcactgtgctggcacctccaaagatgattgccaacaaacc 60
Query: 427 ggctgatggagtgaagataaactatgtcgaaggtgacatgttcagtttcattccacctgc 486
||||||||| |||| |||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 61 ggctgatggggtgatgataaactatgttgaaggtgacatgttcagtttcatcccacctgc 120
Query: 487 tcaaactgtcgtgctaaagcttgtgctgcaccacctgaccgatgaggagtgcgtcaagct 546
||||||||| ||||||||||||||||||||||| ||| |||||||| ||||| || |
Sbjct: 121 tcaaactgtgatgctaaagcttgtgctgcaccactggactgatgaggactgcgtgaacat 180
Query: 547 tctggctcaatgccggaaggcgattccttcacggaaggatggcgggaaagttataatcgg 606
|||||| |||||||||||||||||||||||| |||||||||| |||||||| ||||
Sbjct: 181 cctggctgcatgccggaaggcgattccttcacgagaggatggcggaaaagttatcgtcgg 240
Query: 607 tgacattatgattgaccactctgggcctatgctggaaactcagctcctgatggacatcgg 666
||||||| ||||||| |||||||||||||| |||||||||| ||| | |||||||| ||
Sbjct: 241 tgacattgtgattgattactctgggcctatgttggaaactcacctcttaatggacattgg 300
Query: 667 catgatgaccatgacaaaaggacgacagcacgacgaaaaagaatggcgtcagctcttcac 726
|||||||||||||||||||||||| || | || ||||| |||| ||| || ||||||
Sbjct: 301 catgatgaccatgacaaaaggacgccaacgggatgaaaatgaatttcgtgagatcttcat 360
Query: 727 caaagcagggttcagcgaatacaagattctcaaggaatttggaactcgtgttgccttcga 786
||||||||||||||||| || |||||| | ||| |||||||| ||||||||||||||||
Sbjct: 361 gaaagcagggttcagcgactataagattttaaagaaatttggagctcgtgttgccttcga 420
Query: 787 agtctatccgtgagat 802
||| ||||||| ||||
Sbjct: 421 agtgtatccgtaagat 436
Score = 46.1 bits (23), Expect = 0.007
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 968 tatgtactttgtacctgctatgttgttttaa 998
||||||||||||||||||| |||| ||||||
Sbjct: 632 tatgtactttgtacctgctttgttattttaa 662
>gb|BG101917.1|BG101917 RHIZ2_21_D11.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 631
Score = 420 bits (212), Expect = e-115
Identities = 380/436 (87%)
Strand = Plus / Plus
Query: 367 ggccttcccacacataaaatgcactgtgctggcccctcccaagatcattgccgccaaacc 426
||||| ||| ||||||||||||||||||||||| ||||| ||||| |||||| ||||||
Sbjct: 1 ggcctacccgcacataaaatgcactgtgctggcacctccaaagatgattgccaacaaacc 60
Query: 427 ggctgatggagtgaagataaactatgtcgaaggtgacatgttcagtttcattccacctgc 486
||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 61 ggctgatggtgtgatgataaactatgttgaaggtgacatgttcagtttcattccacctgc 120
Query: 487 tcaaactgtcgtgctaaagcttgtgctgcaccacctgaccgatgaggagtgcgtcaagct 546
||||||||| ||||||||||||||||||||||| ||| |||||||| ||||| || |
Sbjct: 121 tcaaactgtgatgctaaagcttgtgctgcaccactggactgatgaggactgcgtgaacat 180
Query: 547 tctggctcaatgccggaaggcgattccttcacggaaggatggcgggaaagttataatcgg 606
|||||| ||||||||| |||||||||||||| |||||||||| |||||||| ||||
Sbjct: 181 cctggctgcatgccggaaagcgattccttcacgagaggatggcggaaaagttatcgtcgg 240
Query: 607 tgacattatgattgaccactctgggcctatgctggaaactcagctcctgatggacatcgg 666
||||||| |||||||| |||||||||||||| |||||||||| ||| | |||||||| ||
Sbjct: 241 tgacattgtgattgactactctgggcctatgttggaaactcacctcttaatggacattgg 300
Query: 667 catgatgaccatgacaaaaggacgacagcacgacgaaaaagaatggcgtcagctcttcac 726
|||||||||||||||||| ||||| || | || ||||| |||| ||| || ||||||
Sbjct: 301 catgatgaccatgacaaagggacgccaacgggatgaaaatgaatttcgtgagatcttcat 360
Query: 727 caaagcagggttcagcgaatacaagattctcaaggaatttggaactcgtgttgccttcga 786
||||||||||||||||| || |||||| | ||| |||||||| ||||||||||||||||
Sbjct: 361 gaaagcagggttcagcgactataagattttaaagaaatttggagctcgtgttgccttcga 420
Query: 787 agtctatccgtgagat 802
||| ||||||| ||||
Sbjct: 421 agtgtatccgtaagat 436
>gb|BE357804.1|BE357804 DG1_22_B11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 659
Score = 416 bits (210), Expect = e-114
Identities = 372/426 (87%)
Strand = Plus / Plus
Query: 377 cacataaaatgcactgtgctggcccctcccaagatcattgccgccaaaccggctgatgga 436
||||||||||||||||||||||| ||||| ||||| |||||| |||||||||||||||
Sbjct: 4 cacataaaatgcactgtgctggcacctccaaagatgattgccaacaaaccggctgatggg 63
Query: 437 gtgaagataaactatgtcgaaggtgacatgttcagtttcattccacctgctcaaactgtc 496
|||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 64 gtgatgataaactatgttgaaggtgacatgttcagtttcatcccacctgctcaaactgtg 123
Query: 497 gtgctaaagcttgtgctgcaccacctgaccgatgaggagtgcgtcaagcttctggctcaa 556
||||||||||||||||||||||| ||| |||||||| ||||| || | |||||| |
Sbjct: 124 atgctaaagcttgtgctgcaccactggactgatgaggactgcgtgaacatcctggctgca 183
Query: 557 tgccggaaggcgattccttcacggaaggatggcgggaaagttataatcggtgacattatg 616
||||||||||||||||||||||| |||||||||| |||||||| ||||||||||| ||
Sbjct: 184 tgccggaaggcgattccttcacgagaggatggcggaaaagttatcgtcggtgacattgtg 243
Query: 617 attgaccactctgggcctatgctggaaactcagctcctgatggacatcggcatgatgacc 676
||||| |||||||||||||| |||||||||| ||| | |||||||| ||||||||||||
Sbjct: 244 attgattactctgggcctatgttggaaactcacctcttaatggacattggcatgatgacc 303
Query: 677 atgacaaaaggacgacagcacgacgaaaaagaatggcgtcagctcttcaccaaagcaggg 736
|||||||||||||| || | || ||||| |||| ||| || |||||| |||||||||
Sbjct: 304 atgacaaaaggacgccaacgggatgaaaatgaatttcgtgagatcttcatgaaagcaggg 363
Query: 737 ttcagcgaatacaagattctcaaggaatttggaactcgtgttgccttcgaagtctatccg 796
|||||||| || |||||| | ||| |||||||| ||||||||||||||||||| ||||||
Sbjct: 364 ttcagcgactataagattttaaagaaatttggagctcgtgttgccttcgaagtgtatccg 423
Query: 797 tgagat 802
| ||||
Sbjct: 424 taagat 429
Score = 52.0 bits (26), Expect = 1e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 968 tatgtactttgtacctgctatgttgttttaagtg 1001
||||||||||||||||||| |||| |||||||||
Sbjct: 624 tatgtactttgtacctgctttgttattttaagtg 657
>gb|BE360960.1|BE360960 DG1_68_B10.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 666
Score = 416 bits (210), Expect = e-114
Identities = 372/426 (87%)
Strand = Plus / Plus
Query: 377 cacataaaatgcactgtgctggcccctcccaagatcattgccgccaaaccggctgatgga 436
||||||||||||||||||||||| ||||| ||||| |||||| |||||||||||||||
Sbjct: 6 cacataaaatgcactgtgctggcacctccaaagatgattgccaacaaaccggctgatggg 65
Query: 437 gtgaagataaactatgtcgaaggtgacatgttcagtttcattccacctgctcaaactgtc 496
|||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 66 gtgatgataaactatgttgaaggtgacatgttcagtttcatcccacctgctcaaactgtg 125
Query: 497 gtgctaaagcttgtgctgcaccacctgaccgatgaggagtgcgtcaagcttctggctcaa 556
||||||||||||||||||||||| ||| |||||||| ||||| || | |||||| |
Sbjct: 126 atgctaaagcttgtgctgcaccactggactgatgaggactgcgtgaacatcctggctgca 185
Query: 557 tgccggaaggcgattccttcacggaaggatggcgggaaagttataatcggtgacattatg 616
||||||||||||||||||||||| |||||||||| |||||||| ||||||||||| ||
Sbjct: 186 tgccggaaggcgattccttcacgagaggatggcggaaaagttatcgtcggtgacattgtg 245
Query: 617 attgaccactctgggcctatgctggaaactcagctcctgatggacatcggcatgatgacc 676
||||| |||||||||||||| |||||||||| ||| | |||||||| ||||||||||||
Sbjct: 246 attgattactctgggcctatgttggaaactcacctcttaatggacattggcatgatgacc 305
Query: 677 atgacaaaaggacgacagcacgacgaaaaagaatggcgtcagctcttcaccaaagcaggg 736
|||||||||||||| || | || ||||| |||| ||| || |||||| |||||||||
Sbjct: 306 atgacaaaaggacgccaacgggatgaaaatgaatttcgtgagatcttcatgaaagcaggg 365
Query: 737 ttcagcgaatacaagattctcaaggaatttggaactcgtgttgccttcgaagtctatccg 796
|||||||| || |||||| | ||| |||||||| ||||||||||||||||||| ||||||
Sbjct: 366 ttcagcgactataagattttaaagaaatttggagctcgtgttgccttcgaagtgtatccg 425
Query: 797 tgagat 802
| ||||
Sbjct: 426 taagat 431
Score = 52.0 bits (26), Expect = 1e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 968 tatgtactttgtacctgctatgttgttttaagtg 1001
||||||||||||||||||| |||| |||||||||
Sbjct: 626 tatgtactttgtacctgctttgttattttaagtg 659
>gb|CW022257.1|CW022257 104_161_10431735_5_30007 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10431735, DNA
sequence
Length = 700
Score = 410 bits (207), Expect = e-112
Identities = 384/443 (86%)
Strand = Plus / Plus
Query: 11 tcctacctcctggtggaaggcatccctcacgaggaccacatgaaccacacctctttcgtg 70
||||||||||||||||| ||||||||||| |||| ||||| ||||||||||| | |||
Sbjct: 256 tcctacctcctggtggacggcatccctcatgaggtgcacatcaaccacacctccctggtg 315
Query: 71 ctcacctgcacctcgtcgcgctacatcgagccggcaatagggctggccgagtggttcagg 130
||||||||||||||| |||||||| |||| |||| | ||| |||| |||||||||| |
Sbjct: 316 ctcacctgcacctcgacgcgctacctcgacgcggcgctggggttggcagagtggttcaag 375
Query: 131 aaggacacggccacgtcaccgttcgaggagctgcacggggcgactctgttccacgagagc 190
|||||| || ||| | || ||| ||||||||||||||||| |||||||||| ||||||
Sbjct: 376 aaggacgtggtgacgccgccattccaggagctgcacggggcggctctgttccatgagagc 435
Query: 191 atgggcagcctcgacgcagatttccacgacatggcgagcgacgccttggacacccacgac 250
|||| ||||||||| | |||| |||| ||||||||| ||| ||||||||| ||||||||
Sbjct: 436 atggagagcctcgacccggattaccacaacatggcgaacgaagccttggacgcccacgac 495
Query: 251 aacttcggcgtcgagatggcgctgcgggagttcagggacttgttcgaggggatccagtcc 310
||||| || | ||||| |||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 496 aactttgggattgagatcgcgctgcgggagttcagggacttgtttgaggggattcagtcc 555
Query: 311 atgacctactgctgcggtaactttggtgatgacaagggtgccagggccattgccaaggcc 370
||||| ||||||||||||| || ||||||||||||| |||||||||||||| | |||||
Sbjct: 556 atgacttactgctgcggtacctgtggtgatgacaagtttgccagggccattgtccaggcc 615
Query: 371 ttcccacacataaaatgcactgtgctggcccctcccaagatcattgccgccaaaccggct 430
| ||| ||||||||||||||||||||||| ||||||||||| |||||| ||||||||||
Sbjct: 616 tacccgcacataaaatgcactgtgctggcacctcccaagatgattgccaacaaaccggct 675
Query: 431 gatggagtgaagataaactatgt 453
||||| |||| ||||||||||||
Sbjct: 676 gatggggtgatgataaactatgt 698
>gb|CD428865.1|CD428865 ETH1_1_F11.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_1_F11_A002 3', mRNA sequence
Length = 711
Score = 408 bits (206), Expect = e-112
Identities = 371/426 (87%)
Strand = Plus / Plus
Query: 377 cacataaaatgcactgtgctggcccctcccaagatcattgccgccaaaccggctgatgga 436
||||||||||||||||||||||| ||||| ||||| |||||| |||||||||||||||
Sbjct: 6 cacataaaatgcactgtgctggcacctccaaagatgattgccaacaaaccggctgatggg 65
Query: 437 gtgaagataaactatgtcgaaggtgacatgttcagtttcattccacctgctcaaactgtc 496
|||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 66 gtgatgataaactatgttgaaggtgacatgttcagtttcatcccacctgctcaaactgtg 125
Query: 497 gtgctaaagcttgtgctgcaccacctgaccgatgaggagtgcgtcaagcttctggctcaa 556
||||||||||||||||||||||| ||| |||||||| ||||| || | |||||| |
Sbjct: 126 atgctaaagcttgtgctgcaccactggactgatgaggactgcgtgaacatcctggctgca 185
Query: 557 tgccggaaggcgattccttcacggaaggatggcgggaaagttataatcggtgacattatg 616
||||||||||||||||||||||| |||||||||| |||||||| ||||||||||| ||
Sbjct: 186 tgccggaaggcgattccttcacgagaggatggcggaaaagttatcgtcggtgacattgtg 245
Query: 617 attgaccactctgggcctatgctggaaactcagctcctgatggacatcggcatgatgacc 676
||||| |||||||||||||| |||||||||| ||| | |||||||| ||||||||||||
Sbjct: 246 attgattactctgggcctatgttggaaactcacctcttaatggacattggcatgatgacc 305
Query: 677 atgacaaaaggacgacagcacgacgaaaaagaatggcgtcagctcttcaccaaagcaggg 736
|||||||||||||| || | || ||||| |||| ||| | |||||| |||||||||
Sbjct: 306 atgacaaaaggacgccaacgggatgaaaatgaatttcgtgggatcttcatgaaagcaggg 365
Query: 737 ttcagcgaatacaagattctcaaggaatttggaactcgtgttgccttcgaagtctatccg 796
|||||||| || |||||| | ||| |||||||| ||||||||||||||||||| ||||||
Sbjct: 366 ttcagcgactataagattttaaagaaatttggagctcgtgttgccttcgaagtgtatccg 425
Query: 797 tgagat 802
| ||||
Sbjct: 426 taagat 431
Score = 52.0 bits (26), Expect = 1e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 968 tatgtactttgtacctgctatgttgttttaagtg 1001
||||||||||||||||||| |||| |||||||||
Sbjct: 626 tatgtactttgtacctgctttgttattttaagtg 659
>gb|BE363142.1|BE363142 DG1_9_D06.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 421
Score = 406 bits (205), Expect = e-111
Identities = 367/421 (87%)
Strand = Plus / Plus
Query: 367 ggccttcccacacataaaatgcactgtgctggcccctcccaagatcattgccgccaaacc 426
||||| ||| ||||||||||||||||||||||| ||||| ||||| |||||| ||||||
Sbjct: 1 ggcctacccgcacataaaatgcactgtgctggcacctccaaagatgattgccaacaaacc 60
Query: 427 ggctgatggagtgaagataaactatgtcgaaggtgacatgttcagtttcattccacctgc 486
||||||||| |||| |||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 61 ggctgatggggtgatgataaactatgttgaaggtgacatgttcagtttcatcccacctgc 120
Query: 487 tcaaactgtcgtgctaaagcttgtgctgcaccacctgaccgatgaggagtgcgtcaagct 546
||||||||| ||||||||||||||||||||||| ||| |||||||| ||||| || |
Sbjct: 121 tcaaactgtgatgctaaagcttgtgctgcaccactggactgatgaggactgcgtgaacat 180
Query: 547 tctggctcaatgccggaaggcgattccttcacggaaggatggcgggaaagttataatcgg 606
|||||| |||||||||||||||||||||||| |||||||||| |||||||| ||||
Sbjct: 181 cctggctgcatgccggaaggcgattccttcacgagaggatggcggaaaagttatcgtcgg 240
Query: 607 tgacattatgattgaccactctgggcctatgctggaaactcagctcctgatggacatcgg 666
||||||| ||||||| |||||||||||||| |||||||||| ||| | |||||||| ||
Sbjct: 241 tgacattgtgattgattactctgggcctatgttggaaactcacctcttaatggacattgg 300
Query: 667 catgatgaccatgacaaaaggacgacagcacgacgaaaaagaatggcgtcagctcttcac 726
|||||||||||||||||||||||| || | || ||||| |||| ||| || ||||||
Sbjct: 301 catgatgaccatgacaaaaggacgccaacgggatgaaaatgaatttcgtgagatcttcat 360
Query: 727 caaagcagggttcagcgaatacaagattctcaaggaatttggaactcgtgttgccttcga 786
||||||||||||||||| || |||||| | ||| |||||||| ||||||||||||||||
Sbjct: 361 gaaagcagggttcagcgactataagattttaaagaaatttggagctcgtgttgccttcga 420
Query: 787 a 787
|
Sbjct: 421 a 421
>gb|CN140650.1|CN140650 OX1_45_F02.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_45_F02_A002 5', mRNA sequence
Length = 796
Score = 402 bits (203), Expect = e-110
Identities = 383/443 (86%)
Strand = Plus / Plus
Query: 11 tcctacctcctggtggaaggcatccctcacgaggaccacatgaaccacacctctttcgtg 70
||||||||||||||||| ||||||||||| |||| ||||| ||||||||||| | |||
Sbjct: 351 tcctacctcctggtggacggcatccctcatgaggtgcacatcaaccacacctccctggtg 410
Query: 71 ctcacctgcacctcgtcgcgctacatcgagccggcaatagggctggccgagtggttcagg 130
||||||||||||||| |||||||| |||| |||| | ||| |||| |||||||||| |
Sbjct: 411 ctcacctgcacctcgacgcgctacctcgacgcggcgctggggttggcagagtggttcaag 470
Query: 131 aaggacacggccacgtcaccgttcgaggagctgcacggggcgactctgttccacgagagc 190
|||||| || ||| | || ||| ||||||||||||||||| |||||||||| ||||||
Sbjct: 471 aaggacgtggtgacgccgccattccaggagctgcacggggcggctctgttccatgagagc 530
Query: 191 atgggcagcctcgacgcagatttccacgacatggcgagcgacgccttggacacccacgac 250
|||| ||||||||| | |||| |||| ||||||||| ||| ||||||||| ||||||||
Sbjct: 531 atggagagcctcgacccggattaccacaacatggcgaacgaagccttggacgcccacgac 590
Query: 251 aacttcggcgtcgagatggcgctgcgggagttcagggacttgttcgaggggatccagtcc 310
||||| || | ||||| |||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 591 aactttgggattgagatcgcgctgcgggagttcagggacttgtttgaggggattcagtcc 650
Query: 311 atgacctactgctgcggtaactttggtgatgacaagggtgccagggccattgccaaggcc 370
||||| ||||||||||||| || ||||||||||||| |||||||||||||| | |||||
Sbjct: 651 atgacttactgctgcggtacctgtggtgatgacaagtttgccagggccattgtccaggcc 710
Query: 371 ttcccacacataaaatgcactgtgctggcccctcccaagatcattgccgccaaaccggct 430
| ||| ||||||||||||||||||||||| ||||| ||||| |||||| ||||||||||
Sbjct: 711 tacccgcacataaaatgcactgtgctggcacctccaaagatgattgccaacaaaccggct 770
Query: 431 gatggagtgaagataaactatgt 453
||||| |||| ||||||||||||
Sbjct: 771 gatggggtgatgataaactatgt 793
>gb|CW485013.1|CW485013 fsbb001f247i06k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f247i06, DNA
sequence
Length = 770
Score = 396 bits (200), Expect = e-108
Identities = 380/440 (86%)
Strand = Plus / Minus
Query: 11 tcctacctcctggtggaaggcatccctcacgaggaccacatgaaccacacctctttcgtg 70
||||||||||||||||| ||||||||||| |||| ||||| ||||||||||| | |||
Sbjct: 440 tcctacctcctggtggacggcatccctcatgaggtgcacatcaaccacacctccctggtg 381
Query: 71 ctcacctgcacctcgtcgcgctacatcgagccggcaatagggctggccgagtggttcagg 130
||||||||||||||| |||||||| |||| |||| | ||| |||| |||||||||| |
Sbjct: 380 ctcacctgcacctcgacgcgctacctcgacgcggcgctggggttggcagagtggttcaag 321
Query: 131 aaggacacggccacgtcaccgttcgaggagctgcacggggcgactctgttccacgagagc 190
|||||| || ||| | || ||| ||||||||||||||||| |||||||||| ||||||
Sbjct: 320 aaggacgtggtgacgccgccattccaggagctgcacggggcggctctgttccatgagagc 261
Query: 191 atgggcagcctcgacgcagatttccacgacatggcgagcgacgccttggacacccacgac 250
|||| ||||||||| | |||| |||| ||||||||| ||| ||||||||| ||||||||
Sbjct: 260 atggagagcctcgacccggattaccacaacatggcgaacgaagccttggacgcccacgac 201
Query: 251 aacttcggcgtcgagatggcgctgcgggagttcagggacttgttcgaggggatccagtcc 310
||||| || | ||||| |||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 200 aactttgggattgagatcgcgctgcgggagttcagggacttgtttgaggggattcagtcc 141
Query: 311 atgacctactgctgcggtaactttggtgatgacaagggtgccagggccattgccaaggcc 370
||||| ||||||||||||| || ||||||||||||| |||||||||||||| | |||||
Sbjct: 140 atgacttactgctgcggtacctgtggtgatgacaagtttgccagggccattgtccaggcc 81
Query: 371 ttcccacacataaaatgcactgtgctggcccctcccaagatcattgccgccaaaccggct 430
| ||| ||||||||||||||||||||||| ||||| ||||| |||||| ||||||||||
Sbjct: 80 tacccgcacataaaatgcactgtgctggcacctccaaagatgattgccaacaaaccggct 21
Query: 431 gatggagtgaagataaacta 450
||||| |||| |||||||||
Sbjct: 20 gatggggtgatgataaacta 1
>gb|AW285562.2|AW285562 LG1_245_C12.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 658
Score = 396 bits (200), Expect = e-108
Identities = 362/416 (87%)
Strand = Plus / Plus
Query: 387 gcactgtgctggcccctcccaagatcattgccgccaaaccggctgatggagtgaagataa 446
||||||||||||| ||||| ||||| |||||| ||||||||||||||| |||| |||||
Sbjct: 1 gcactgtgctggcacctccaaagatgattgccaacaaaccggctgatggggtgatgataa 60
Query: 447 actatgtcgaaggtgacatgttcagtttcattccacctgctcaaactgtcgtgctaaagc 506
||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 61 actatgttgaaggtgacatgttcagtttcatcccacctgctcaaactgtgatgctaaagc 120
Query: 507 ttgtgctgcaccacctgaccgatgaggagtgcgtcaagcttctggctcaatgccggaagg 566
|||||||||||||| ||| |||||||| ||||| || | |||||| |||||||||||
Sbjct: 121 ttgtgctgcaccactggactgatgaggactgcgtgaacatcctggctgcatgccggaagg 180
Query: 567 cgattccttcacggaaggatggcgggaaagttataatcggtgacattatgattgaccact 626
||||||||||||| |||||||||| |||||||| ||||||||||| ||||||| |||
Sbjct: 181 cgattccttcacgagaggatggcggaaaagttatcgtcggtgacattgtgattgattact 240
Query: 627 ctgggcctatgctggaaactcagctcctgatggacatcggcatgatgaccatgacaaaag 686
||||||||||| |||||||||| ||| | |||||||| ||||||||||||||||||||||
Sbjct: 241 ctgggcctatgttggaaactcacctcttaatggacattggcatgatgaccatgacaaaag 300
Query: 687 gacgacagcacgacgaaaaagaatggcgtcagctcttcaccaaagcagggttcagcgaat 746
|||| || | || ||||| |||| ||| || |||||| ||||||||||||||||| |
Sbjct: 301 gacgccaacgggatgaaaatgaatttcgtgagatcttcatgaaagcagggttcagcgact 360
Query: 747 acaagattctcaaggaatttggaactcgtgttgccttcgaagtctatccgtgagat 802
| |||||| | ||| |||||||| ||||||||||||||||||| ||||||| ||||
Sbjct: 361 ataagattttaaagaaatttggagctcgtgttgccttcgaagtgtatccgtaagat 416
Score = 52.0 bits (26), Expect = 1e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 968 tatgtactttgtacctgctatgttgttttaagtg 1001
||||||||||||||||||| |||| |||||||||
Sbjct: 611 tatgtactttgtacctgctttgttattttaagtg 644
>gb|AW923129.1|AW923129 DG1_49_C12.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 651
Score = 394 bits (199), Expect = e-108
Identities = 364/419 (86%)
Strand = Plus / Plus
Query: 384 aatgcactgtgctggcccctcccaagatcattgccgccaaaccggctgatggagtgaaga 443
|||||||||||||||| ||||| |||| |||||| ||||||||||||||| |||| ||
Sbjct: 4 aatgcactgtgctggcacctccagagatgattgccaacaaaccggctgatggggtgatga 63
Query: 444 taaactatgtcgaaggtgacatgttcagtttcattccacctgctcaaactgtcgtgctaa 503
|||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 64 taaactatgttgaaggtgacatgttcagtttcatcccacctgctcaaactgtgatgctaa 123
Query: 504 agcttgtgctgcaccacctgaccgatgaggagtgcgtcaagcttctggctcaatgccgga 563
||||||||||||||||| ||| |||||||| ||||| || | |||||| ||||||||
Sbjct: 124 agcttgtgctgcaccactggactgatgaggactgcgtgaacatcctggctgcatgccgga 183
Query: 564 aggcgattccttcacggaaggatggcgggaaagttataatcggtgacattatgattgacc 623
|||||||||||||||| |||||||||| |||||||| ||||||||||| |||||||
Sbjct: 184 aggcgattccttcacgagaggatggcggaaaagttatcgtcggtgacattgtgattgatt 243
Query: 624 actctgggcctatgctggaaactcagctcctgatggacatcggcatgatgaccatgacaa 683
|||||||||||||| |||||||||| ||| | |||||||| |||||||||||||||||||
Sbjct: 244 actctgggcctatgttggaaactcacctcttaatggacattggcatgatgaccatgacaa 303
Query: 684 aaggacgacagcacgacgaaaaagaatggcgtcagctcttcaccaaagcagggttcagcg 743
||||||| || | || ||||| |||| ||| || |||||| ||||||||||||||||
Sbjct: 304 aaggacgccaacgggatgaaaatgaatttcgtgagatcttcatgaaagcagggttcagcg 363
Query: 744 aatacaagattctcaaggaatttggaactcgtgttgccttcgaagtctatccgtgagat 802
| || |||||| | ||| |||||||| ||||||||||||||||||| ||||||| ||||
Sbjct: 364 actataagattttaaagaaatttggagctcgtgttgccttcgaagtgtatccgtaagat 422
Score = 52.0 bits (26), Expect = 1e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 968 tatgtactttgtacctgctatgttgttttaagtg 1001
||||||||||||||||||| |||| |||||||||
Sbjct: 617 tatgtactttgtacctgctttgttattttaagtg 650
>gb|CD230932.1|CD230932 SS1_7_H07.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_7_H07_A012 3', mRNA sequence
Length = 642
Score = 381 bits (192), Expect = e-103
Identities = 345/396 (87%)
Strand = Plus / Plus
Query: 407 aagatcattgccgccaaaccggctgatggagtgaagataaactatgtcgaaggtgacatg 466
||||| |||||| ||||||||||||||| |||| |||||||||||| ||||||||||||
Sbjct: 2 aagatgattgccaacaaaccggctgatggggtgatgataaactatgttgaaggtgacatg 61
Query: 467 ttcagtttcattccacctgctcaaactgtcgtgctaaagcttgtgctgcaccacctgacc 526
||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 62 ttcagtttcatcccacctgctcaaactgtgatgctaaagcttgtgctgcaccactggact 121
Query: 527 gatgaggagtgcgtcaagcttctggctcaatgccggaaggcgattccttcacggaaggat 586
|||||||| ||||| || | |||||| |||||||||||||||||||||||| |||||
Sbjct: 122 gatgaggactgcgtgaacatcctggctgcatgccggaaggcgattccttcacgagaggat 181
Query: 587 ggcgggaaagttataatcggtgacattatgattgaccactctgggcctatgctggaaact 646
||||| |||||||| ||||||||||| |||||||| |||||||||||||| ||||||||
Sbjct: 182 ggcggaaaagttatcgtcggtgacattgtgattgactactctgggcctatgttggaaact 241
Query: 647 cagctcctgatggacatcggcatgatgaccatgacaaaaggacgacagcacgacgaaaaa 706
|| ||| | |||||||| |||||||||||||||||||||||||| || | || |||||
Sbjct: 242 cacctcttaatggacattggcatgatgaccatgacaaaaggacgccaacgggatgaaaat 301
Query: 707 gaatggcgtcagctcttcaccaaagcagggttcagcgaatacaagattctcaaggaattt 766
|||| ||| || |||||| ||||||||||||||||| || |||||| | ||| |||||
Sbjct: 302 gaatttcgtgagatcttcatgaaagcagggttcagcgactataagattttaaagaaattt 361
Query: 767 ggaactcgtgttgccttcgaagtctatccgtgagat 802
||| ||||||||||||||||||| ||||||| ||||
Sbjct: 362 ggagctcgtgttgccttcgaagtgtatccgtaagat 397
Score = 44.1 bits (22), Expect = 0.027
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 968 tatgtactttgtacctgctatgttgttttaagtg 1001
||||||||||||||||||| |||| | |||||||
Sbjct: 592 tatgtactttgtacctgctttgttatcttaagtg 625
>gb|BG102635.1|BG102635 RHIZ2_35_D09.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 605
Score = 377 bits (190), Expect = e-102
Identities = 349/402 (86%)
Strand = Plus / Plus
Query: 401 cctcccaagatcattgccgccaaaccggctgatggagtgaagataaactatgtcgaaggt 460
||||| ||||| |||||| ||||||||||||||| |||| |||||||||||| ||||||
Sbjct: 1 cctccaaagatgattgccaacaaaccggctgatggtgtgatgataaactatgttgaaggt 60
Query: 461 gacatgttcagtttcattccacctgctcaaactgtcgtgctaaagcttgtgctgcaccac 520
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 61 gacatgttcagtttcattccacctgctcaaactgtgatgctaaagcttgtgctgcaccac 120
Query: 521 ctgaccgatgaggagtgcgtcaagcttctggctcaatgccggaaggcgattccttcacgg 580
||| |||||||| ||||| || | |||||| ||||||||| ||||||||||||||
Sbjct: 121 tggactgatgaggactgcgtgaacatcctggctgcatgccggaaagcgattccttcacga 180
Query: 581 aaggatggcgggaaagttataatcggtgacattatgattgaccactctgggcctatgctg 640
|||||||||| |||||||| ||||||||||| |||||||| |||||||||||||| ||
Sbjct: 181 gaggatggcggaaaagttatcgtcggtgacattgtgattgactactctgggcctatgttg 240
Query: 641 gaaactcagctcctgatggacatcggcatgatgaccatgacaaaaggacgacagcacgac 700
|||||||| ||| | |||||||| |||||||||||||||||||| ||||| || | ||
Sbjct: 241 gaaactcacctcttaatggacattggcatgatgaccatgacaaagggacgccaacgggat 300
Query: 701 gaaaaagaatggcgtcagctcttcaccaaagcagggttcagcgaatacaagattctcaag 760
||||| |||| ||| || |||||| ||||||||||||||||| || |||||| | |||
Sbjct: 301 gaaaatgaatttcgtgagatcttcatgaaagcagggttcagcgactataagattttaaag 360
Query: 761 gaatttggaactcgtgttgccttcgaagtctatccgtgagat 802
|||||||| ||||||||||||||||||| ||||||| ||||
Sbjct: 361 aaatttggagctcgtgttgccttcgaagtgtatccgtaagat 402
>gb|CD233135.1|CD233135 SS1_12_H02.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_12_H02_A012 3', mRNA sequence
Length = 629
Score = 377 bits (190), Expect = e-102
Identities = 334/382 (87%)
Strand = Plus / Plus
Query: 421 caaaccggctgatggagtgaagataaactatgtcgaaggtgacatgttcagtttcattcc 480
||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||| ||
Sbjct: 6 caaaccggctgatggggtgatgataaactatgttgaaggtgacatgttcagtttcatccc 65
Query: 481 acctgctcaaactgtcgtgctaaagcttgtgctgcaccacctgaccgatgaggagtgcgt 540
||||||||||||||| ||||||||||||||||||||||| ||| |||||||| |||||
Sbjct: 66 acctgctcaaactgtgatgctaaagcttgtgctgcaccactggactgatgaggactgcgt 125
Query: 541 caagcttctggctcaatgccggaaggcgattccttcacggaaggatggcgggaaagttat 600
|| | |||||| |||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 126 gaacatcctggctgcatgccggaaggcgattccttcacgagaggatggcggaaaagttat 185
Query: 601 aatcggtgacattatgattgaccactctgggcctatgctggaaactcagctcctgatgga 660
||||||||||| |||||||| |||||||||||||| |||||||||| ||| | |||||
Sbjct: 186 cgtcggtgacattgtgattgactactctgggcctatgttggaaactcacctcttaatgga 245
Query: 661 catcggcatgatgaccatgacaaaaggacgacagcacgacgaaaaagaatggcgtcagct 720
||| |||||||||||||||||||||||||| || | || ||||| |||| ||| || |
Sbjct: 246 cattggcatgatgaccatgacaaaaggacgccaacgggatgaaaatgaatttcgtgagat 305
Query: 721 cttcaccaaagcagggttcagcgaatacaagattctcaaggaatttggaactcgtgttgc 780
||||| ||||||||||||||||| || |||||| | ||| |||||||| ||||||||||
Sbjct: 306 cttcatgaaagcagggttcagcgactataagattttaaagaaatttggagctcgtgttgc 365
Query: 781 cttcgaagtctatccgtgagat 802
||||||||| ||||||| ||||
Sbjct: 366 cttcgaagtgtatccgtaagat 387
Score = 44.1 bits (22), Expect = 0.027
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 968 tatgtactttgtacctgctatgttgttttaagtg 1001
||||||||||||||||||| |||| | |||||||
Sbjct: 582 tatgtactttgtacctgctttgttatcttaagtg 615
>gb|AW285553.2|AW285553 LG1_245_B12.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 643
Score = 375 bits (189), Expect = e-102
Identities = 348/401 (86%)
Strand = Plus / Plus
Query: 402 ctcccaagatcattgccgccaaaccggctgatggagtgaagataaactatgtcgaaggtg 461
|||| ||||| |||||| ||||||||||||||| |||| |||||||||||| |||||||
Sbjct: 1 ctccaaagatgattgccaacaaaccggctgatggggtgatgataaactatgttgaaggtg 60
Query: 462 acatgttcagtttcattccacctgctcaaactgtcgtgctaaagcttgtgctgcaccacc 521
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 61 acatgttcagtttcatcccacctgctcaaactgtgatgctaaagcttgtgctgcaccact 120
Query: 522 tgaccgatgaggagtgcgtcaagcttctggctcaatgccggaaggcgattccttcacgga 581
||| |||||||| ||||| || | |||||| ||||||||||||||||||||||||
Sbjct: 121 ggactgatgaggactgcgtgaacatcctggctgcatgccggaaggcgattccttcacgag 180
Query: 582 aggatggcgggaaagttataatcggtgacattatgattgaccactctgggcctatgctgg 641
|||||||||| |||||||| ||||||||||| ||||||| |||||||||||||| |||
Sbjct: 181 aggatggcggaaaagttatcgtcggtgacattgtgattgattactctgggcctatgttgg 240
Query: 642 aaactcagctcctgatggacatcggcatgatgaccatgacaaaaggacgacagcacgacg 701
||||||| ||| | |||||||| |||||||||||||||||||||||||| || | || |
Sbjct: 241 aaactcacctcttaatggacattggcatgatgaccatgacaaaaggacgccaacgggatg 300
Query: 702 aaaaagaatggcgtcagctcttcaccaaagcagggttcagcgaatacaagattctcaagg 761
|||| |||| ||| || |||||| ||||||||||||||||| || |||||| | |||
Sbjct: 301 aaaatgaatttcgtgagatcttcatgaaagcagggttcagcgactataagattttaaaga 360
Query: 762 aatttggaactcgtgttgccttcgaagtctatccgtgagat 802
|||||||| ||||||||||||||||||| ||||||| ||||
Sbjct: 361 aatttggagctcgtgttgccttcgaagtgtatccgtaagat 401
Score = 52.0 bits (26), Expect = 1e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 968 tatgtactttgtacctgctatgttgttttaagtg 1001
||||||||||||||||||| |||| |||||||||
Sbjct: 596 tatgtactttgtacctgctttgttattttaagtg 629
>gb|CD235247.1|CD235247 SS1_28_C11.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_28_C11_A012 3', mRNA sequence
Length = 662
Score = 375 bits (189), Expect = e-102
Identities = 348/401 (86%)
Strand = Plus / Plus
Query: 402 ctcccaagatcattgccgccaaaccggctgatggagtgaagataaactatgtcgaaggtg 461
|||| ||||| |||||| ||||||||||||||| |||| |||||||||||| |||||||
Sbjct: 1 ctccaaagatgattgccaacaaaccggctgatggggtgatgataaactatgttgaaggtg 60
Query: 462 acatgttcagtttcattccacctgctcaaactgtcgtgctaaagcttgtgctgcaccacc 521
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 61 acatgttcagtttcatcccacctgctcaaactgtgatgctaaagcttgtgctgcaccact 120
Query: 522 tgaccgatgaggagtgcgtcaagcttctggctcaatgccggaaggcgattccttcacgga 581
||| |||||||| ||||| || | |||||| ||||||||||||||||||||||||
Sbjct: 121 ggactgatgaggactgcgtgaacatcctggctgcatgccggaaggcgattccttcacgag 180
Query: 582 aggatggcgggaaagttataatcggtgacattatgattgaccactctgggcctatgctgg 641
|||||||||| |||||||| ||||||||||| |||||||| |||||||||||||| |||
Sbjct: 181 aggatggcggaaaagttatcgtcggtgacattgtgattgactactctgggcctatgttgg 240
Query: 642 aaactcagctcctgatggacatcggcatgatgaccatgacaaaaggacgacagcacgacg 701
||||||| ||| | |||||||| |||||||||||||||||||||||||| || | || |
Sbjct: 241 aaactcacctcttaatggacattggcatgatgaccatgacaaaaggacgccaacgggatg 300
Query: 702 aaaaagaatggcgtcagctcttcaccaaagcagggttcagcgaatacaagattctcaagg 761
|||| |||| ||| || |||||| ||||||||||||||||| || ||| || | |||
Sbjct: 301 aaaatgaatttcgtgagatcttcatgaaagcagggttcagcgactataaggttttaaaga 360
Query: 762 aatttggaactcgtgttgccttcgaagtctatccgtgagat 802
|||||||| ||||||||||||||||||| ||||||| ||||
Sbjct: 361 aatttggagctcgtgttgccttcgaagtgtatccgtaagat 401
Score = 44.1 bits (22), Expect = 0.027
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 968 tatgtactttgtacctgctatgttgttttaagtg 1001
||||||||||||||||||| |||| | |||||||
Sbjct: 596 tatgtactttgtacctgctttgttatcttaagtg 629
>gb|BE355636.1|BE355636 DG1_115_C05.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 644
Score = 373 bits (188), Expect = e-101
Identities = 344/396 (86%)
Strand = Plus / Plus
Query: 407 aagatcattgccgccaaaccggctgatggagtgaagataaactatgtcgaaggtgacatg 466
||||| |||||| ||||||||||||||| |||| |||||||||||| ||||||||||||
Sbjct: 2 aagatgattgccaacaaaccggctgatggggtgatgataaactatgttgaaggtgacatg 61
Query: 467 ttcagtttcattccacctgctcaaactgtcgtgctaaagcttgtgctgcaccacctgacc 526
||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 62 ttcagtttcatcccacctgctcaaactgtgatgctaaagcttgtgctgcaccactggact 121
Query: 527 gatgaggagtgcgtcaagcttctggctcaatgccggaaggcgattccttcacggaaggat 586
|||||||| ||||| || | |||||| |||||||||||||||||||||||| |||||
Sbjct: 122 gatgaggactgcgtgaacatcctggctgcatgccggaaggcgattccttcacgagaggat 181
Query: 587 ggcgggaaagttataatcggtgacattatgattgaccactctgggcctatgctggaaact 646
||||| |||||||| ||||||||||| ||||||| |||||||||||||| ||||||||
Sbjct: 182 ggcggaaaagttatcgtcggtgacattgtgattgattactctgggcctatgttggaaact 241
Query: 647 cagctcctgatggacatcggcatgatgaccatgacaaaaggacgacagcacgacgaaaaa 706
|| ||| | |||||||| |||||||||||||||||||||||||| || | || |||||
Sbjct: 242 cacctcttaatggacattggcatgatgaccatgacaaaaggacgccaacgggatgaaaat 301
Query: 707 gaatggcgtcagctcttcaccaaagcagggttcagcgaatacaagattctcaaggaattt 766
|||| ||| || |||||| ||||||||||||||||| || |||||| | ||| |||||
Sbjct: 302 gaatttcgtgagatcttcatgaaagcagggttcagcgactataagattttaaagaaattt 361
Query: 767 ggaactcgtgttgccttcgaagtctatccgtgagat 802
||| ||||||||||||||||||| ||||||| ||||
Sbjct: 362 ggagctcgtgttgccttcgaagtgtatccgtaagat 397
Score = 52.0 bits (26), Expect = 1e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 968 tatgtactttgtacctgctatgttgttttaagtg 1001
||||||||||||||||||| |||| |||||||||
Sbjct: 592 tatgtactttgtacctgctttgttattttaagtg 625
>gb|BE361412.1|BE361412 DG1_71_A02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 592
Score = 373 bits (188), Expect = e-101
Identities = 344/396 (86%)
Strand = Plus / Plus
Query: 407 aagatcattgccgccaaaccggctgatggagtgaagataaactatgtcgaaggtgacatg 466
||||| |||||| ||||||||||||||| |||| |||||||||||| ||||||||||||
Sbjct: 3 aagatgattgccaacaaaccggctgatggggtgatgataaactatgttgaaggtgacatg 62
Query: 467 ttcagtttcattccacctgctcaaactgtcgtgctaaagcttgtgctgcaccacctgacc 526
||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 63 ttcagtttcatcccacctgctcaaactgtgatgctaaagcttgtgctgcaccactggact 122
Query: 527 gatgaggagtgcgtcaagcttctggctcaatgccggaaggcgattccttcacggaaggat 586
|||||||| ||||| || | |||||| |||||||||||||||||||||||| |||||
Sbjct: 123 gatgaggactgcgtgaacatcctggctgcatgccggaaggcgattccttcacgagaggat 182
Query: 587 ggcgggaaagttataatcggtgacattatgattgaccactctgggcctatgctggaaact 646
||||| |||||||| ||||||||||| ||||||| |||||||||||||| ||||||||
Sbjct: 183 ggcggaaaagttatcgtcggtgacattgtgattgattactctgggcctatgttggaaact 242
Query: 647 cagctcctgatggacatcggcatgatgaccatgacaaaaggacgacagcacgacgaaaaa 706
|| ||| | |||||||| |||||||||||||||||||||||||| || | || |||||
Sbjct: 243 cacctcttaatggacattggcatgatgaccatgacaaaaggacgccaacgggatgaaaat 302
Query: 707 gaatggcgtcagctcttcaccaaagcagggttcagcgaatacaagattctcaaggaattt 766
|||| ||| || |||||| ||||||||||||||||| || |||||| | ||| |||||
Sbjct: 303 gaatttcgtgagatcttcatgaaagcagggttcagcgactataagattttaaagaaattt 362
Query: 767 ggaactcgtgttgccttcgaagtctatccgtgagat 802
||| ||||||||||||||||||| ||||||| ||||
Sbjct: 363 ggagctcgtgttgccttcgaagtgtatccgtaagat 398
>gb|BG103544.1|BG103544 RHIZ2_37_G11.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 611
Score = 373 bits (188), Expect = e-101
Identities = 344/396 (86%)
Strand = Plus / Plus
Query: 407 aagatcattgccgccaaaccggctgatggagtgaagataaactatgtcgaaggtgacatg 466
||||| |||||| ||||||||||||||| |||| |||||||||||| ||||||||||||
Sbjct: 3 aagatgattgccaacaaaccggctgatggtgtgatgataaactatgttgaaggtgacatg 62
Query: 467 ttcagtttcattccacctgctcaaactgtcgtgctaaagcttgtgctgcaccacctgacc 526
||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 63 ttcagtttcattccacctgctcaaactgtgatgctaaagcttgtgctgcaccactggact 122
Query: 527 gatgaggagtgcgtcaagcttctggctcaatgccggaaggcgattccttcacggaaggat 586
|||||||| ||||| || | |||||| ||||||||| |||||||||||||| |||||
Sbjct: 123 gatgaggactgcgtgaacatcctggctgcatgccggaaagcgattccttcacgagaggat 182
Query: 587 ggcgggaaagttataatcggtgacattatgattgaccactctgggcctatgctggaaact 646
||||| |||||||| ||||||||||| |||||||| |||||||||||||| ||||||||
Sbjct: 183 ggcggaaaagttatcgtcggtgacattgtgattgactactctgggcctatgttggaaact 242
Query: 647 cagctcctgatggacatcggcatgatgaccatgacaaaaggacgacagcacgacgaaaaa 706
|| ||| | |||||||| |||||||||||||||||||| ||||| || | || |||||
Sbjct: 243 cacctcttaatggacattggcatgatgaccatgacaaagggacgccaacgggatgaaaat 302
Query: 707 gaatggcgtcagctcttcaccaaagcagggttcagcgaatacaagattctcaaggaattt 766
|||| ||| || |||||| ||||||||||||||||| || |||||| | ||| |||||
Sbjct: 303 gaatttcgtgagatcttcatgaaagcagggttcagcgactataagattttaaagaaattt 362
Query: 767 ggaactcgtgttgccttcgaagtctatccgtgagat 802
||| ||||||||||||||||||| ||||||| ||||
Sbjct: 363 ggagctcgtgttgccttcgaagtgtatccgtaagat 398
>gb|AW285550.2|AW285550 LG1_245_A12.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 642
Score = 373 bits (188), Expect = e-101
Identities = 344/396 (86%)
Strand = Plus / Plus
Query: 407 aagatcattgccgccaaaccggctgatggagtgaagataaactatgtcgaaggtgacatg 466
||||| |||||| ||||||||||||||| |||| |||||||||||| ||||||||||||
Sbjct: 5 aagatgattgccaacaaaccggctgatggggtgatgataaactatgttgaaggtgacatg 64
Query: 467 ttcagtttcattccacctgctcaaactgtcgtgctaaagcttgtgctgcaccacctgacc 526
||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 65 ttcagtttcatcccacctgctcaaactgtgatgctaaagcttgtgctgcaccactggact 124
Query: 527 gatgaggagtgcgtcaagcttctggctcaatgccggaaggcgattccttcacggaaggat 586
|||||||| ||||| || | |||||| |||||||||||||||||||||||| |||||
Sbjct: 125 gatgaggactgcgtgaacatcctggctgcatgccggaaggcgattccttcacgagaggat 184
Query: 587 ggcgggaaagttataatcggtgacattatgattgaccactctgggcctatgctggaaact 646
||||| |||||||| ||||||||||| ||||||| |||||||||||||| ||||||||
Sbjct: 185 ggcggaaaagttatcgtcggtgacattgtgattgattactctgggcctatgttggaaact 244
Query: 647 cagctcctgatggacatcggcatgatgaccatgacaaaaggacgacagcacgacgaaaaa 706
|| ||| | |||||||| |||||||||||||||||||||||||| || | || |||||
Sbjct: 245 cacctcttaatggacattggcatgatgaccatgacaaaaggacgccaacgggatgaaaat 304
Query: 707 gaatggcgtcagctcttcaccaaagcagggttcagcgaatacaagattctcaaggaattt 766
|||| ||| || |||||| ||||||||||||||||| || |||||| | ||| |||||
Sbjct: 305 gaatttcgtgagatcttcatgaaagcagggttcagcgactataagattttaaagaaattt 364
Query: 767 ggaactcgtgttgccttcgaagtctatccgtgagat 802
||| ||||||||||||||||||| ||||||| ||||
Sbjct: 365 ggagctcgtgttgccttcgaagtgtatccgtaagat 400
Score = 52.0 bits (26), Expect = 1e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 968 tatgtactttgtacctgctatgttgttttaagtg 1001
||||||||||||||||||| |||| |||||||||
Sbjct: 595 tatgtactttgtacctgctttgttattttaagtg 628
>gb|BE361040.1|BE361040 DG1_69_C10.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 653
Score = 367 bits (185), Expect = 1e-099
Identities = 343/396 (86%)
Strand = Plus / Minus
Query: 407 aagatcattgccgccaaaccggctgatggagtgaagataaactatgtcgaaggtgacatg 466
||||| |||||| ||||||||||||||| |||| |||||||||||| ||||||||||||
Sbjct: 652 aagatgattgccaacaaaccggctgatggggtgatgataaactatgttgaaggtgacatg 593
Query: 467 ttcagtttcattccacctgctcaaactgtcgtgctaaagcttgtgctgcaccacctgacc 526
||||||||||| |||| |||||||||||| ||||||||||||||||||||||| |||
Sbjct: 592 ttcagtttcatcccacntgctcaaactgtgatgctaaagcttgtgctgcaccactggact 533
Query: 527 gatgaggagtgcgtcaagcttctggctcaatgccggaaggcgattccttcacggaaggat 586
|||||||| ||||| || | |||||| |||||||||||||||||||||||| |||||
Sbjct: 532 gatgaggactgcgtgaacatcctggctgcatgccggaaggcgattccttcacgagaggat 473
Query: 587 ggcgggaaagttataatcggtgacattatgattgaccactctgggcctatgctggaaact 646
||||| |||||||| ||||||||||| ||||||| |||||||||||||| ||||||||
Sbjct: 472 ggcggaaaagttatcgtcggtgacattgtgattgattactctgggcctatgttggaaact 413
Query: 647 cagctcctgatggacatcggcatgatgaccatgacaaaaggacgacagcacgacgaaaaa 706
|| ||| | |||||||| |||||||||||||||||||||||||| || | || |||||
Sbjct: 412 cacctcttaatggacattggcatgatgaccatgacaaaaggacgccaacgggatgaaaat 353
Query: 707 gaatggcgtcagctcttcaccaaagcagggttcagcgaatacaagattctcaaggaattt 766
|||| ||| || |||||| ||||||||||||||||| || |||||| | ||| |||||
Sbjct: 352 gaatttcgtgagatcttcatgaaagcagggttcagcgactataagattttaaagaaattt 293
Query: 767 ggaactcgtgttgccttcgaagtctatccgtgagat 802
||| ||||||||||||||||||| ||||||| ||||
Sbjct: 292 ggagctcgtgttgccttcgaagtgtatccgtaagat 257
Score = 52.0 bits (26), Expect = 1e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 968 tatgtactttgtacctgctatgttgttttaagtg 1001
||||||||||||||||||| |||| |||||||||
Sbjct: 62 tatgtactttgtacctgctttgttattttaagtg 29
>gb|BE362539.1|BE362539 DG1_87_B05.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 573
Score = 367 bits (185), Expect = 1e-099
Identities = 353/409 (86%)
Strand = Plus / Plus
Query: 11 tcctacctcctggtggaaggcatccctcacgaggaccacatgaaccacacctctttcgtg 70
||||||||||||||||| ||||||||||| |||| ||||| ||||||||||| | |||
Sbjct: 14 tcctacctcctggtggacggcatccctcatgaggtgcacatcaaccacacctccctggtg 73
Query: 71 ctcacctgcacctcgtcgcgctacatcgagccggcaatagggctggccgagtggttcagg 130
||||||||||||||| |||||||| |||| |||| | ||| |||| |||||||||| |
Sbjct: 74 ctcacctgcacctcgacgcgctacctcgacgcggcgctggggttggcagagtggttcaag 133
Query: 131 aaggacacggccacgtcaccgttcgaggagctgcacggggcgactctgttccacgagagc 190
|||||| || ||| | || ||| ||||||||||||||||| |||||||||| ||||||
Sbjct: 134 aaggacgtggtgacgccgccattccaggagctgcacggggcggctctgttccatgagagc 193
Query: 191 atgggcagcctcgacgcagatttccacgacatggcgagcgacgccttggacacccacgac 250
|||| ||||||||| | |||| |||| ||||||||| ||| ||||||||| ||||||||
Sbjct: 194 atggagagcctcgacccggattaccacaacatggcgaacgaagccttggacgcccacgac 253
Query: 251 aacttcggcgtcgagatggcgctgcgggagttcagggacttgttcgaggggatccagtcc 310
||||| || | ||||| |||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 254 aactttgggattgagatcgcgctgcgggagttcagggacttgtttgaggggattcagtcc 313
Query: 311 atgacctactgctgcggtaactttggtgatgacaagggtgccagggccattgccaaggcc 370
||||| ||||||||||||| || ||||||||||||| |||||||||||||| | |||||
Sbjct: 314 atgacttactgctgcggtacctgtggtgatgacaagtttgccagggccattgtccaggcc 373
Query: 371 ttcccacacataaaatgcactgtgctggcccctcccaagatcattgccg 419
| ||| ||||||||||||||||||||||| ||||| ||||| |||||||
Sbjct: 374 tacccgcacataaaatgcactgtgctggcacctccaaagatgattgccg 422
Score = 163 bits (82), Expect = 4e-038
Identities = 121/134 (90%)
Strand = Plus / Plus
Query: 557 tgccggaaggcgattccttcacggaaggatggcgggaaagttataatcggtgacattatg 616
||||||||||||||||||||||| |||||||||| |||||||| ||||||||||| ||
Sbjct: 418 tgccggaaggcgattccttcacgagaggatggcggaaaagttatcgtcggtgacattgtg 477
Query: 617 attgaccactctgggcctatgctggaaactcagctcctgatggacatcggcatgatgacc 676
||||| |||||||||||||| |||||||||| ||| | |||||||| ||||||||||||
Sbjct: 478 attgattactctgggcctatgttggaaactcacctcttaatggacattggcatgatgacc 537
Query: 677 atgacaaaaggacg 690
||||||||||||||
Sbjct: 538 atgacaaaaggacg 551
>gb|CD231429.1|CD231429 SS1_16_A12.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_16_A12_A012 3', mRNA sequence
Length = 605
Score = 367 bits (185), Expect = 1e-099
Identities = 329/377 (87%)
Strand = Plus / Plus
Query: 426 cggctgatggagtgaagataaactatgtcgaaggtgacatgttcagtttcattccacctg 485
|||||||||| |||| |||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 1 cggctgatggggtgatgataaactatgttgaaggtgacatgttcagtttcatcccacctg 60
Query: 486 ctcaaactgtcgtgctaaagcttgtgctgcaccacctgaccgatgaggagtgcgtcaagc 545
|||||||||| ||||||||||||||||||||||| ||| |||||||| ||||| ||
Sbjct: 61 ctcaaactgtgatgctaaagcttgtgctgcaccactggactgatgaggactgcgtgaaca 120
Query: 546 ttctggctcaatgccggaaggcgattccttcacggaaggatggcgggaaagttataatcg 605
| |||||| |||||||||||||||||||||||| |||||||||| |||||||| |||
Sbjct: 121 tcctggctgcatgccggaaggcgattccttcacgagaggatggcggaaaagttatcgtcg 180
Query: 606 gtgacattatgattgaccactctgggcctatgctggaaactcagctcctgatggacatcg 665
|||||||| |||||||| |||||||||||||| |||||||||| ||| | |||||||| |
Sbjct: 181 gtgacattgtgattgactactctgggcctatgttggaaactcacctcttaatggacattg 240
Query: 666 gcatgatgaccatgacaaaaggacgacagcacgacgaaaaagaatggcgtcagctcttca 725
||||||||||||||||||||||||| || | || ||||| |||| ||| || ||||||
Sbjct: 241 gcatgatgaccatgacaaaaggacgccaacgggatgaaaatgaatttcgtgagatcttca 300
Query: 726 ccaaagcagggttcagcgaatacaagattctcaaggaatttggaactcgtgttgccttcg 785
||||||||||||||||| || |||||| | ||| |||||||| |||||||||||||||
Sbjct: 301 tgaaagcagggttcagcgactataagattttaaagaaatttggagctcgtgttgccttcg 360
Query: 786 aagtctatccgtgagat 802
|||| ||||||| ||||
Sbjct: 361 aagtgtatccgtaagat 377
Score = 44.1 bits (22), Expect = 0.027
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 968 tatgtactttgtacctgctatgttgttttaagtg 1001
||||||||||||||||||| |||| | |||||||
Sbjct: 572 tatgtactttgtacctgctttgttatcttaagtg 605
>gb|CN132891.1|CN132891 OX1_8_G11.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_8_G11_A002 5', mRNA sequence
Length = 774
Score = 365 bits (184), Expect = 6e-099
Identities = 352/408 (86%)
Strand = Plus / Plus
Query: 11 tcctacctcctggtggaaggcatccctcacgaggaccacatgaaccacacctctttcgtg 70
||||||||||||||||| ||||||||||| |||| ||||| ||||||||||| | |||
Sbjct: 364 tcctacctcctggtggacggcatccctcatgaggtgcacatcaaccacacctccctggtg 423
Query: 71 ctcacctgcacctcgtcgcgctacatcgagccggcaatagggctggccgagtggttcagg 130
||||||||||||||| |||||||| |||| |||| | ||| |||| |||||||||| |
Sbjct: 424 ctcacctgcacctcgacgcgctacctcgacgcggcgctggggttggcagagtggttcaag 483
Query: 131 aaggacacggccacgtcaccgttcgaggagctgcacggggcgactctgttccacgagagc 190
|||||| || ||| | || ||| ||||||||||||||||| |||||||||| ||||||
Sbjct: 484 aaggacgtggtgacgccgccattccaggagctgcacggggcggctctgttccatgagagc 543
Query: 191 atgggcagcctcgacgcagatttccacgacatggcgagcgacgccttggacacccacgac 250
|||| ||||||||| | |||| |||| ||||||||| ||| ||||||||| ||||||||
Sbjct: 544 atggagagcctcgacccggattaccacaacatggcgaacgaagccttggacgcccacgac 603
Query: 251 aacttcggcgtcgagatggcgctgcgggagttcagggacttgttcgaggggatccagtcc 310
||||| || | ||||| |||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 604 aactttgggattgagatcgcgctgcgggagttcagggacttgtttgaggggattcagtcc 663
Query: 311 atgacctactgctgcggtaactttggtgatgacaagggtgccagggccattgccaaggcc 370
||||| ||||||||||||| || ||||||||||||| |||||||||||||| | |||||
Sbjct: 664 atgacttactgctgcggtacctgtggtgatgacaagtttgccagggccattgtccaggcc 723
Query: 371 ttcccacacataaaatgcactgtgctggcccctcccaagatcattgcc 418
| ||| ||||||||||||||||||||||| ||||| ||||| ||||||
Sbjct: 724 tacccgcacataaaatgcactgtgctggcacctccaaagatgattgcc 771
>gb|BE126083.1|BE126083 DG1_65_H08.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 605
Score = 361 bits (182), Expect = 9e-098
Identities = 329/378 (87%)
Strand = Plus / Plus
Query: 425 ccggctgatggagtgaagataaactatgtcgaaggtgacatgttcagtttcattccacct 484
||||||||||| |||| |||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 1 ccggctgatggggtgatgataaactatgttgaaggtgacatgttcagtttcatcccacct 60
Query: 485 gctcaaactgtcgtgctaaagcttgtgctgcaccacctgaccgatgaggagtgcgtcaag 544
||||||||||| ||||||||||||||||||||||| ||| |||||||| ||||| ||
Sbjct: 61 gctcaaactgtgatgctaaagcttgtgctgcaccactggactgatgaggactgcgtgaac 120
Query: 545 cttctggctcaatgccggaaggcgattccttcacggaaggatggcgggaaagttataatc 604
| |||||| |||||||||||||||||||||||| |||||||||| |||||||| ||
Sbjct: 121 atcctggctgcatgccggaaggcgattccttcacgagaggatggcggaaaagttatcgtc 180
Query: 605 ggtgacattatgattgaccactctgggcctatgctggaaactcagctcctgatggacatc 664
||||||||| ||||||| |||||||||||||| |||||||||| ||| | ||||||||
Sbjct: 181 ggtgacattgtgattgattactctgggcctatgttggaaactcacctcttaatggacatt 240
Query: 665 ggcatgatgaccatgacaaaaggacgacagcacgacgaaaaagaatggcgtcagctcttc 724
|||||||||||||||||||||||||| || | || ||||| |||| ||| || |||||
Sbjct: 241 ggcatgatgaccatgacaaaaggacgccaacgggatgaaaatgaatttcgtgagatcttc 300
Query: 725 accaaagcagggttcagcgaatacaagattctcaaggaatttggaactcgtgttgccttc 784
| ||||||||||||||||| || |||||| | ||| |||||||| ||||||||||||||
Sbjct: 301 atgaaagcagggttcagcgactataagattttaaagaaatttggagctcgtgttgccttc 360
Query: 785 gaagtctatccgtgagat 802
||||| ||||||| ||||
Sbjct: 361 gaagtgtatccgtaagat 378
Score = 46.1 bits (23), Expect = 0.007
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 968 tatgtactttgtacctgctatgttgttttaa 998
||||||||||||||||||| |||| ||||||
Sbjct: 573 tatgtactttgtacctgctttgttattttaa 603
>gb|BG102577.1|BG102577 RHIZ2_34_G04.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 577
Score = 361 bits (182), Expect = 9e-098
Identities = 329/378 (87%)
Strand = Plus / Plus
Query: 425 ccggctgatggagtgaagataaactatgtcgaaggtgacatgttcagtttcattccacct 484
||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1 ccggctgatggtgtgatgataaactatgttgaaggtgacatgttcagtttcattccacct 60
Query: 485 gctcaaactgtcgtgctaaagcttgtgctgcaccacctgaccgatgaggagtgcgtcaag 544
||||||||||| ||||||||||||||||||||||| ||| |||||||| ||||| ||
Sbjct: 61 gctcaaactgtgatgctaaagcttgtgctgcaccactggactgatgaggactgcgtgaac 120
Query: 545 cttctggctcaatgccggaaggcgattccttcacggaaggatggcgggaaagttataatc 604
| |||||| ||||||||| |||||||||||||| |||||||||| |||||||| ||
Sbjct: 121 atcctggctgcatgccggaaagcgattccttcacgagaggatggcggaaaagttatcgtc 180
Query: 605 ggtgacattatgattgaccactctgggcctatgctggaaactcagctcctgatggacatc 664
||||||||| |||||||| |||||||||||||| |||||||||| ||| | ||||||||
Sbjct: 181 ggtgacattgtgattgactactctgggcctatgttggaaactcacctcttaatggacatt 240
Query: 665 ggcatgatgaccatgacaaaaggacgacagcacgacgaaaaagaatggcgtcagctcttc 724
|||||||||||||||||||| ||||| || | || ||||| |||| ||| || |||||
Sbjct: 241 ggcatgatgaccatgacaaagggacgccaacgggatgaaaatgaatttcgtgagatcttc 300
Query: 725 accaaagcagggttcagcgaatacaagattctcaaggaatttggaactcgtgttgccttc 784
| ||||||||||||||||| || |||||| | ||| |||||||| ||||||||||||||
Sbjct: 301 atgaaagcagggttcagcgactataagattttaaagaaatttggagctcgtgttgccttc 360
Query: 785 gaagtctatccgtgagat 802
||||| ||||||| ||||
Sbjct: 361 gaagtgtatccgtaagat 378
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 280,933
Number of Sequences: 832831
Number of extensions: 280933
Number of successful extensions: 78768
Number of sequences better than 0.5: 159
Number of HSP's better than 0.5 without gapping: 159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78334
Number of HSP's gapped (non-prelim): 376
length of query: 1100
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1080
effective length of database: 474,703,049
effective search space: 512679292920
effective search space used: 512679292920
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)