BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.654
(682 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG048965.1|BG048965 OV1_21_D10.g1_A002 Ovary 1 (OV1) Sor... 630 e-179
gb|BG240839.1|BG240839 OV1_38_H10.g1_A002 Ovary 1 (OV1) Sor... 630 e-179
gb|BG241158.1|BG241158 OV1_38_H10.b1_A002 Ovary 1 (OV1) Sor... 630 e-179
gb|BI074873.1|BI074873 IP1_17_A02.g1_A002 Immature pannicle... 630 e-179
gb|BE918547.1|BE918547 OV1_8_C07.b1_A002 Ovary 1 (OV1) Sorg... 599 e-169
gb|CF770673.1|CF770673 DSBF1_9_D02.b1_A010 Drought-stressed... 593 e-168
gb|CF770760.1|CF770760 DSBF1_9_D02.g1_A010 Drought-stressed... 492 e-137
gb|BG047701.1|BG047701 OV1_26_G03.b1_A002 Ovary 1 (OV1) Sor... 468 e-130
gb|BG048026.1|BG048026 OV1_26_G03.g1_A002 Ovary 1 (OV1) Sor... 450 e-125
gb|BG048661.1|BG048661 OV1_21_D10.b1_A002 Ovary 1 (OV1) Sor... 394 e-108
gb|BI075181.1|BI075181 IP1_17_A02.b1_A002 Immature pannicle... 383 e-104
gb|BZ627745.1|BZ627745 ih54g03.g1 WGS-SbicolorF (DH5a methy... 365 4e-099
gb|CW242990.1|CW242990 104_702_11219641_116_37563_001 Sorgh... 301 4e-080
gb|AW677635.1|AW677635 WS1_10_B01.b1_A002 Water-stressed 1 ... 280 2e-073
gb|AW677759.1|AW677759 WS1_10_B01.g1_A002 Water-stressed 1 ... 280 2e-073
gb|BE917965.1|BE917965 OV1_8_C07.g1_A002 Ovary 1 (OV1) Sorg... 266 2e-069
gb|CW353735.1|CW353735 fsbb001f016j20k0 Sorghum methylation... 220 1e-055
gb|CX608128.1|CX608128 ANR1_32_G07.g1_A002 Anaerobic roots ... 204 8e-051
gb|CX611965.1|CX611965 ANR1_27_F01.g1_A002 Anaerobic roots ... 204 8e-051
gb|DN551858.1|DN551858 pSPR-RT-MR-H1_C06_C262 pSPR Sorghum ... 204 8e-051
gb|CW481091.1|CW481091 fsbb001f240h16f0 Sorghum methylation... 200 1e-049
gb|BQ656077.1|BQ656077 pRC0409 Sorghum halepense rhizome cD... 180 1e-043
gb|CF074204.1|CF074204 FE1_23_F08.b1_A002 Iron-deficient se... 172 3e-041
gb|AI724948.1|AI724948 RHIZ1_31_H01.y3_A001 Rhizome1 (RHIZ1... 157 2e-036
gb|CW357147.1|CW357147 fsbb001f023j24k0 Sorghum methylation... 149 4e-034
gb|CF430905.1|CF430905 NIT1_1_C04.g1_A002 Nitrogen-deficien... 149 4e-034
gb|CF675654.1|CF675654 cytB5 Subtractive cDNA library from ... 147 2e-033
gb|BE593285.1|BE593285 WS1_99_H07.g1_A002 Water-stressed 1 ... 90 3e-016
gb|CW101543.1|CW101543 104_469_11004708_148_34411_042 Sorgh... 84 2e-014
gb|CF755930.1|CF755930 DSAF1_2_F09.b1_A011 Drought-stressed... 82 8e-014
gb|CF755994.1|CF755994 DSAF1_2_F09.g1_A011 Drought-stressed... 82 8e-014
gb|BZ421854.1|BZ421854 id46f06.b1 WGS-SbicolorF (DH5a methy... 76 5e-012
gb|CW274559.1|CW274559 104_747_11404489_148_35372_007 Sorgh... 48 0.001
gb|CF759156.1|CF759156 DSAF1_41_F12.b1_A011 Drought-stresse... 44 0.017
gb|CW038963.1|CW038963 104_271_10505218_115_30388 Sorghum m... 42 0.066
gb|DV162820.1|DV162820 P3-G6 Sorghum bicolor greenbug-respo... 42 0.066
gb|CL154161.1|CL154161 104_339_10781206_114_31371_070 Sorgh... 40 0.26
gb|CL159316.1|CL159316 104_348_10804164_114_31379_372 Sorgh... 40 0.26
gb|CL175718.1|CL175718 104_381_10892638_148_31764_238 Sorgh... 40 0.26
gb|CL181870.1|CL181870 104_393_10897036_148_31921_028 Sorgh... 40 0.26
gb|CW093680.1|CW093680 104_457_10999924_116_37476_016 Sorgh... 40 0.26
gb|CW102554.1|CW102554 104_470_11011404_148_34413_034 Sorgh... 40 0.26
gb|CW165655.1|CW165655 104_574_11152623_148_36480_062 Sorgh... 40 0.26
gb|CW177578.1|CW177578 104_591_11159102_148_36609_063 Sorgh... 40 0.26
gb|CW239438.1|CW239438 104_697_11217657_148_37506_035 Sorgh... 40 0.26
gb|CW240529.1|CW240529 104_699_11218266_116_37548_075 Sorgh... 40 0.26
gb|CW240530.1|CW240530 104_699_11218266_148_37539_075 Sorgh... 40 0.26
gb|CW262685.1|CW262685 104_730_11230215_148_35221_058 Sorgh... 40 0.26
gb|CW272101.1|CW272101 104_744_11403297_148_35352_041 Sorgh... 40 0.26
gb|CW272102.1|CW272102 104_744_11403297_148_36226_041 Sorgh... 40 0.26
gb|CW408326.1|CW408326 fsbb001f102c20f0 Sorghum methylation... 40 0.26
gb|CW417929.1|CW417929 fsbb001f121c15k0 Sorghum methylation... 40 0.26
gb|CW458570.1|CW458570 fsbb001f204o18f0 Sorghum methylation... 40 0.26
gb|CW489102.1|CW489102 fsbb001f265n12k0 Sorghum methylation... 40 0.26
gb|CW493463.1|CW493463 fsbb001f284d22k0 Sorghum methylation... 40 0.26
gb|AW565799.1|AW565799 LG1_349_B02.g1_A002 Light Grown 1 (L... 40 0.26
gb|AW671700.1|AW671700 LG1_349_B02.b1_A002 Light Grown 1 (L... 40 0.26
gb|BG465007.1|BG465007 EM1_35_A05.b1_A002 Embryo 1 (EM1) So... 40 0.26
gb|CD206130.1|CD206130 HS1_20_D01.g1_A012 Heat-shocked seed... 40 0.26
gb|CD206522.1|CD206522 HS1_23_H04.b1_A012 Heat-shocked seed... 40 0.26
gb|CD220361.1|CD220361 CCC1_66_B11.g1_A007 Callus culture/c... 40 0.26
gb|CD229616.1|CD229616 CCC1_17_B03.g1_A007 Callus culture/c... 40 0.26
gb|CF426969.1|CF426969 PH1_2_B09.g1_A002 Phosphorous-defici... 40 0.26
gb|CF430133.1|CF430133 PH1_26_F08.g1_A002 Phosphorous-defic... 40 0.26
gb|CF433034.1|CF433034 NIT1_20_C12.g1_A002 Nitrogen-deficie... 40 0.26
gb|CF480500.1|CF480500 POL1_66_E01.b1_A002 Pollen Sorghum b... 40 0.26
gb|CF489238.1|CF489238 POL1_55_E11.g1_A002 Pollen Sorghum b... 40 0.26
gb|CF770970.1|CF770970 DSBF1_12_C04.g1_A010 Drought-stresse... 40 0.26
gb|CF772089.1|CF772089 DSBF1_29_A09.g9_A010 Drought-stresse... 40 0.26
gb|CN131209.1|CN131209 RHOH1_46_B12.g1_A002 Acid- and alkal... 40 0.26
gb|CN137038.1|CN137038 OX1_54_G05.g1_A002 Oxidatively-stres... 40 0.26
gb|CF675626.1|CF675626 THAU2 Subtractive cDNA library from ... 40 0.26
gb|CF675675.1|CF675675 RUBISCO Subtractive cDNA library fro... 40 0.26
gb|CX611475.1|CX611475 ANR1_24_H03.g1_A002 Anaerobic roots ... 40 0.26
gb|DR831561.1|DR831561 MT14 Sorghum bicolor greenbug-respon... 40 0.26
gb|DV162795.1|DV162795 P1-M15 Sorghum bicolor greenbug-resp... 40 0.26
gb|DV162819.1|DV162819 P5-B11 Sorghum bicolor greenbug-resp... 40 0.26
gb|DV162819.2|DV162819 P5-B11 Sorghum bicolor greenbug-resp... 40 0.26
gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete s... 40 0.26
>gb|BG048965.1|BG048965 OV1_21_D10.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 581
Score = 630 bits (318), Expect = e-179
Identities = 396/422 (93%)
Strand = Plus / Minus
Query: 225 actaggcagattccgacttggtgtagatccttacagcaacagccaggcccagtattgcca 284
||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||
Sbjct: 462 actaggcagattccgacttggtgtagatccttacagcgacagccaagcccaatattgcca 403
Query: 285 gggggaccaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtagt 344
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 402 gggggaccaaaaactggaggatcttgatgacgaactctggggtcttatcctggttgtagt 343
Query: 345 gcggctgcttggggggcgtgtacttcaccttactgggtatcgtggccgcatcaatctcac 404
| ||||||||||||||||||||||||||||| ||||||| ||||| |||||||| || |
Sbjct: 342 gtggctgcttggggggcgtgtacttcaccttggtgggtattgtggctgcatcaatttcgc 283
Query: 405 cgacgaggtactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaat 464
|||| | ||||||||||||||||||||| || ||||||||||||||||||||||| ||||
Sbjct: 282 cgactaagtactcgtccatcattgcacgagcagtggtgctgtgccccacatcttcaaaat 223
Query: 465 catcggtagcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcct 524
|||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 222 catcagtagcatccttggcagtggaagacagcagaacatcatcacctccagggtggtcat 163
Query: 525 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcatccttgg 584
|||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 162 ccaggaacttggtcacattgtacacctttccgccgatgacgagccagcagtcgtccttgg 103
Query: 585 tgttgtgcttggccacctcctcaagggtgtacaccttcgaccccgacatcctcctcttcc 644
|||||||||||||||||||||| |||||||||||||| ||| ||||||||||| ||||||
Sbjct: 102 tgttgtgcttggccacctcctcgagggtgtacaccttggactccgacatcctcgtcttcc 43
Query: 645 tc 646
||
Sbjct: 42 tc 41
Score = 40.1 bits (20), Expect = 0.26
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 153 gacagcaaagactcaagtttctga 176
||||||||||||| ||||||||||
Sbjct: 570 gacagcaaagactgaagtttctga 547
>gb|BG240839.1|BG240839 OV1_38_H10.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 607
Score = 630 bits (318), Expect = e-179
Identities = 396/422 (93%)
Strand = Plus / Minus
Query: 225 actaggcagattccgacttggtgtagatccttacagcaacagccaggcccagtattgcca 284
||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||
Sbjct: 462 actaggcagattccgacttggtgtagatccttacagcgacagccaagcccaatattgcca 403
Query: 285 gggggaccaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtagt 344
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 402 gggggaccaaaaactggaggatcttgatgacgaactctggggtcttatcctggttgtagt 343
Query: 345 gcggctgcttggggggcgtgtacttcaccttactgggtatcgtggccgcatcaatctcac 404
| ||||||||||||||||||||||||||||| ||||||| ||||| |||||||| || |
Sbjct: 342 gtggctgcttggggggcgtgtacttcaccttggtgggtattgtggctgcatcaatttcgc 283
Query: 405 cgacgaggtactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaat 464
|||| | ||||||||||||||||||||| || ||||||||||||||||||||||| ||||
Sbjct: 282 cgactaagtactcgtccatcattgcacgagcagtggtgctgtgccccacatcttcaaaat 223
Query: 465 catcggtagcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcct 524
|||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 222 catcagtagcatccttggcagtggaagacagcagaacatcatcacctccagggtggtcat 163
Query: 525 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcatccttgg 584
|||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 162 ccaggaacttggtcacattgtacacctttccgccgatgacgagccagcagtcgtccttgg 103
Query: 585 tgttgtgcttggccacctcctcaagggtgtacaccttcgaccccgacatcctcctcttcc 644
|||||||||||||||||||||| |||||||||||||| ||| ||||||||||| ||||||
Sbjct: 102 tgttgtgcttggccacctcctcgagggtgtacaccttggactccgacatcctcgtcttcc 43
Query: 645 tc 646
||
Sbjct: 42 tc 41
Score = 40.1 bits (20), Expect = 0.26
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 153 gacagcaaagactcaagtttctga 176
||||||||||||| ||||||||||
Sbjct: 570 gacagcaaagactgaagtttctga 547
>gb|BG241158.1|BG241158 OV1_38_H10.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 582
Score = 630 bits (318), Expect = e-179
Identities = 396/422 (93%)
Strand = Plus / Minus
Query: 225 actaggcagattccgacttggtgtagatccttacagcaacagccaggcccagtattgcca 284
||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||
Sbjct: 567 actaggcagattccgacttggtgtagatccttacagcgacagccaagcccaatattgcca 508
Query: 285 gggggaccaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtagt 344
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 507 gggggaccaaaaactggaggatcttgatgacgaactctggggtcttatcctggttgtagt 448
Query: 345 gcggctgcttggggggcgtgtacttcaccttactgggtatcgtggccgcatcaatctcac 404
| ||||||||||||||||||||||||||||| ||||||| ||||| |||||||| || |
Sbjct: 447 gtggctgcttggggggcgtgtacttcaccttggtgggtattgtggctgcatcaatttcgc 388
Query: 405 cgacgaggtactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaat 464
|||| | ||||||||||||||||||||| || ||||||||||||||||||||||| ||||
Sbjct: 387 cgactaagtactcgtccatcattgcacgagcagtggtgctgtgccccacatcttcaaaat 328
Query: 465 catcggtagcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcct 524
|||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 327 catcagtagcatccttggcagtggaagacagcagaacatcatcacctccagggtggtcat 268
Query: 525 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcatccttgg 584
|||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 267 ccaggaacttggtcacattgtacacctttccgccgatgacgagccagcagtcgtccttgg 208
Query: 585 tgttgtgcttggccacctcctcaagggtgtacaccttcgaccccgacatcctcctcttcc 644
|||||||||||||||||||||| |||||||||||||| ||| ||||||||||| ||||||
Sbjct: 207 tgttgtgcttggccacctcctcgagggtgtacaccttggactccgacatcctcgtcttcc 148
Query: 645 tc 646
||
Sbjct: 147 tc 146
>gb|BI074873.1|BI074873 IP1_17_A02.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 603
Score = 630 bits (318), Expect = e-179
Identities = 396/422 (93%)
Strand = Plus / Minus
Query: 225 actaggcagattccgacttggtgtagatccttacagcaacagccaggcccagtattgcca 284
||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||
Sbjct: 431 actaggcagattccgacttggtgtagatccttacagcgacagccaagcccaatattgcca 372
Query: 285 gggggaccaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtagt 344
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 371 gggggaccaaaaactggaggatcttgatgacgaactctggggtcttatcctggttgtagt 312
Query: 345 gcggctgcttggggggcgtgtacttcaccttactgggtatcgtggccgcatcaatctcac 404
| ||||||||||||||||||||||||||||| ||||||| ||||| |||||||| || |
Sbjct: 311 gtggctgcttggggggcgtgtacttcaccttggtgggtattgtggctgcatcaatttcgc 252
Query: 405 cgacgaggtactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaat 464
|||| | ||||||||||||||||||||| || ||||||||||||||||||||||| ||||
Sbjct: 251 cgactaagtactcgtccatcattgcacgagcagtggtgctgtgccccacatcttcaaaat 192
Query: 465 catcggtagcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcct 524
|||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 191 catcagtagcatccttggcagtggaagacagcagaacatcatcacctccagggtggtcat 132
Query: 525 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcatccttgg 584
|||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 131 ccaggaacttggtcacattgtacacctttccgccgatgacgagccagcagtcgtccttgg 72
Query: 585 tgttgtgcttggccacctcctcaagggtgtacaccttcgaccccgacatcctcctcttcc 644
|||||||||||||||||||||| |||||||||||||| ||| ||||||||||| ||||||
Sbjct: 71 tgttgtgcttggccacctcctcgagggtgtacaccttggactccgacatcctcgtcttcc 12
Query: 645 tc 646
||
Sbjct: 11 tc 10
Score = 40.1 bits (20), Expect = 0.26
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 153 gacagcaaagactcaagtttctga 176
||||||||||||| ||||||||||
Sbjct: 539 gacagcaaagactgaagtttctga 516
>gb|BE918547.1|BE918547 OV1_8_C07.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 550
Score = 599 bits (302), Expect = e-169
Identities = 385/413 (93%)
Strand = Plus / Minus
Query: 225 actaggcagattccgacttggtgtagatccttacagcaacagccaggcccagtattgcca 284
||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||
Sbjct: 422 actaggcagattccgacttggtgtagatccttacagcgacagccaagcccaatattgcca 363
Query: 285 gggggaccaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtagt 344
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 362 gggggaccaaaaactggaggatcttgatgacgaactctggggtcttatcctggttgtagt 303
Query: 345 gcggctgcttggggggcgtgtacttcaccttactgggtatcgtggccgcatcaatctcac 404
| ||||||||||||||||||||||||||||| ||||||| ||||| |||||||| || |
Sbjct: 302 gtggctgcttggggggcgtgtacttcaccttggtgggtattgtggctgcatcaatttcgc 243
Query: 405 cgacgaggtactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaat 464
|||| | ||||||||||||||||||||| || ||||||||||||||||||||||| ||||
Sbjct: 242 cgactaagtactcgtccatcattgcacgagcagtggtgctgtgccccacatcttcaaaat 183
Query: 465 catcggtagcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcct 524
|||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 182 catcagtagcatccttggcagtggaagacagcagaacatcatcacctccagggtggtcat 123
Query: 525 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcatccttgg 584
|||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 122 ccaggaacttggtcacattgtacacctttccgccgatgacgagccagcagtcgtccttgg 63
Query: 585 tgttgtgcttggccacctcctcaagggtgtacaccttcgaccccgacatcctc 637
||||||||||||||||||| |||||||||||||| ||| |||||||||||
Sbjct: 62 tgttgtgcttggccacctctcngagggtgtacaccttggactccgacatcctc 10
Score = 40.1 bits (20), Expect = 0.26
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 153 gacagcaaagactcaagtttctga 176
||||||||||||| ||||||||||
Sbjct: 530 gacagcaaagactgaagtttctga 507
>gb|CF770673.1|CF770673 DSBF1_9_D02.b1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_9_D02_A010 5', mRNA sequence
Length = 423
Score = 593 bits (299), Expect = e-168
Identities = 377/403 (93%)
Strand = Plus / Minus
Query: 244 ggtgtagatccttacagcaacagccaggcccagtattgccagggggaccaaaaactggag 303
|||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 423 ggtgtagatccttacagcgacagccaagcccaatattgccagggggaccaaaaactggag 364
Query: 304 gatcttgatgacgaactccggggtcttatcctggttgtagtgcggctgcttggggggcgt 363
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 363 gatcttgatgacgaactctggggtcttatcctggttgtagtgtggctgcttggggggcgt 304
Query: 364 gtacttcaccttactgggtatcgtggccgcatcaatctcaccgacgaggtactcgtccat 423
|||||||||||| ||||||| ||||| |||||||| || ||||| | ||||||||||||
Sbjct: 303 gtacttcaccttggtgggtattgtggctgcatcaatttcgccgactaagtactcgtccat 244
Query: 424 cattgcacgggcggtggtgctgtgccccacatcttcgaaatcatcggtagcatccttggc 483
||||||||| || ||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 243 cattgcacgagcagtggtgctgtgccccacatcttcaaaatcatcagtagcatccttggc 184
Query: 484 agtggaagacagcaggacatcatcacctccagggtggtcctccagaaacttggtcacatt 543
||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 183 agtggaagacagcagaacatcatcacctccagggtggtcatccaggaacttggtcacatt 124
Query: 544 gtacaccttgccgccgatgacgagccagcagtcatccttggtgttgtgcttggccacctc 603
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 123 gtacacctttccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctc 64
Query: 604 ctcaagggtgtacaccttcgaccccgacatcctcctcttcctc 646
||| |||||||||||||| ||| ||||||||||| ||||||||
Sbjct: 63 ctcgagggtgtacaccttggactccgacatcctcgtcttcctc 21
>gb|CF770760.1|CF770760 DSBF1_9_D02.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_9_D02_A010 3', mRNA sequence
Length = 519
Score = 492 bits (248), Expect = e-137
Identities = 308/328 (93%)
Strand = Plus / Minus
Query: 225 actaggcagattccgacttggtgtagatccttacagcaacagccaggcccagtattgcca 284
||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||
Sbjct: 329 actaggcagattccgacttggtgtagatccttacagcgacagccaagcccaatattgcca 270
Query: 285 gggggaccaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtagt 344
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 269 gggggaccaaaaactggaggatcttgatgacgaactctggggtcttatcctggttgtagt 210
Query: 345 gcggctgcttggggggcgtgtacttcaccttactgggtatcgtggccgcatcaatctcac 404
| ||||||||||||||||||||||||||||| ||||||| ||||| |||||||| || |
Sbjct: 209 gtggctgcttggggggcgtgtacttcaccttggtgggtattgtggctgcatcaatttcgc 150
Query: 405 cgacgaggtactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaat 464
|||| | ||||||||||||||||||||| || ||||||||||||||||||||||| ||||
Sbjct: 149 cgactaagtactcgtccatcattgcacgagcagtggtgctgtgccccacatcttcaaaat 90
Query: 465 catcggtagcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcct 524
|||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 89 catcagtagcatccttggcagtggaagacagcagaacatcatcacctccagggtggtcat 30
Query: 525 ccagaaacttggtcacattgtacacctt 552
|||| |||||||||||||||||||||||
Sbjct: 29 ccaggaacttggtcacattgtacacctt 2
Score = 40.1 bits (20), Expect = 0.26
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 153 gacagcaaagactcaagtttctga 176
||||||||||||| ||||||||||
Sbjct: 437 gacagcaaagactgaagtttctga 414
>gb|BG047701.1|BG047701 OV1_26_G03.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 472
Score = 468 bits (236), Expect = e-130
Identities = 302/324 (93%)
Strand = Plus / Minus
Query: 323 ggggtcttatcctggttgtagtgcggctgcttggggggcgtgtacttcaccttactgggt 382
||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 469 ggggtcttatcctggttgtagtgtggctgcttggggggcgtgtacttcaccttggtgggt 410
Query: 383 atcgtggccgcatcaatctcaccgacgaggtactcgtccatcattgcacgggcggtggtg 442
|| ||||| |||||||| || ||||| | ||||||||||||||||||||| || ||||||
Sbjct: 409 attgtggctgcatcaatttcgccgactaagtactcgtccatcattgcacgagcagtggtg 350
Query: 443 ctgtgccccacatcttcgaaatcatcggtagcatccttggcagtggaagacagcaggaca 502
||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 349 ctgtgccccacatcttcaaaatcatcagtagcatccttggcagtggaagacagcagaaca 290
Query: 503 tcatcacctccagggtggtcctccagaaacttggtcacattgtacaccttgccgccgatg 562
|||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||
Sbjct: 289 tcatcacctccagggtggtcatccaggaacttggtcacattgtacacctttccgccgatg 230
Query: 563 acgagccagcagtcatccttggtgttgtgcttggccacctcctcaagggtgtacaccttc 622
|||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 229 acgagccagcagtcgtccttggtgttgtgcttggccacctcctcgagggtgtacaccttg 170
Query: 623 gaccccgacatcctcctcttcctc 646
||| ||||||||||| ||||||||
Sbjct: 169 gactccgacatcctcgtcttcctc 146
>gb|BG048026.1|BG048026 OV1_26_G03.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 447
Score = 450 bits (227), Expect = e-125
Identities = 296/319 (92%)
Strand = Plus / Minus
Query: 225 actaggcagattccgacttggtgtagatccttacagcaacagccaggcccagtattgcca 284
||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||
Sbjct: 328 actaggcagattccgacttggtgtagatccttacagcgacagccaagcccaatattgcca 269
Query: 285 gggggaccaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtagt 344
||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 268 gggggaccaaaaactggaggatcttgatgacgaactctggggtcttatccatgttgtagt 209
Query: 345 gcggctgcttggggggcgtgtacttcaccttactgggtatcgtggccgcatcaatctcac 404
| ||||||||||||||||||||||||||||| ||||||| ||||| |||||||| || |
Sbjct: 208 gtggctgcttggggggcgtgtacttcaccttggtgggtattgtggctgcatcaatttcgc 149
Query: 405 cgacgaggtactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaat 464
|||| | ||||||||||||||||||||| | ||||||||||||||||||||||| ||||
Sbjct: 148 cgactaagtactcgtccatcattgcacgaccagtggtgctgtgccccacatcttcaaaat 89
Query: 465 catcggtagcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcct 524
|||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 88 catcagtagcatccttggcagtggaagacagcagaacatcatcacctccagggtggtcat 29
Query: 525 ccagaaacttggtcacatt 543
|||| ||||||||||||||
Sbjct: 28 ccaggaacttggtcacatt 10
Score = 40.1 bits (20), Expect = 0.26
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 153 gacagcaaagactcaagtttctga 176
||||||||||||| ||||||||||
Sbjct: 436 gacagcaaagactgaagtttctga 413
>gb|BG048661.1|BG048661 OV1_21_D10.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 407
Score = 394 bits (199), Expect = e-108
Identities = 268/291 (92%)
Strand = Plus / Minus
Query: 356 gggggcgtgtacttcaccttactgggtatcgtggccgcatcaatctcaccgacgaggtac 415
|||||||||||||||||||| ||||||| ||| | |||||||| || ||| | | ||||
Sbjct: 407 gggggcgtgtacttcaccttggtgggtattgtgcctgcatcaatttcgccggctaagtac 348
Query: 416 tcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaatcatcggtagca 475
||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 347 tcgtccatcattgcacgagcagtggtgctgtgccccacatcttcaaaatcatcagtagca 288
Query: 476 tccttggcagtggaagacagcaggacatcatcacctccagggtggtcctccagaaacttg 535
||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||
Sbjct: 287 tccttggcagtggaagacagcagaacatcatcacctccagggtggtcatccaggaacttg 228
Query: 536 gtcacattgtacaccttgccgccgatgacgagccagcagtcatccttggtgttgtgcttg 595
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 227 gtcacattgtacacctttccgccgatgacgagccagcagtcgtccttggtgttgtgcttg 168
Query: 596 gccacctcctcaagggtgtacaccttcgaccccgacatcctcctcttcctc 646
||||||||||| |||||||||||||| ||| ||||||||||| ||||||||
Sbjct: 167 gccacctcctcgagggtgtacaccttggactccgacatcctcgtcttcctc 117
>gb|BI075181.1|BI075181 IP1_17_A02.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 520
Score = 383 bits (193), Expect = e-104
Identities = 250/269 (92%)
Strand = Plus / Minus
Query: 378 tgggtatcgtggccgcatcaatctcaccgacgaggtactcgtccatcattgcacgggcgg 437
||||||| ||||| |||||||| || ||||| | ||||||||||||||||||||| || |
Sbjct: 514 tgggtattgtggctgcatcaatttcgccgactaagtactcgtccatcattgcacgagcag 455
Query: 438 tggtgctgtgccccacatcttcgaaatcatcggtagcatccttggcagtggaagacagca 497
|||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 454 tggtgctgtgccccacatcttcaaaatcatcagtagcatccttggcagtggaagacagca 395
Query: 498 ggacatcatcacctccagggtggtcctccagaaacttggtcacattgtacaccttgccgc 557
| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||
Sbjct: 394 gaacatcatcacctccagggtggtcatccaggaacttggtcacattgtacacctttccgc 335
Query: 558 cgatgacgagccagcagtcatccttggtgttgtgcttggccacctcctcaagggtgtaca 617
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 334 cgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcctcgagggtgtaca 275
Query: 618 ccttcgaccccgacatcctcctcttcctc 646
|||| ||| ||||||||||| ||||||||
Sbjct: 274 ccttggactccgacatcctcgtcttcctc 246
>gb|BZ627745.1|BZ627745 ih54g03.g1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ih54g03 5', DNA sequence
Length = 673
Score = 365 bits (184), Expect = 4e-099
Identities = 235/252 (93%)
Strand = Plus / Minus
Query: 232 agattccgacttggtgtagatccttacagcaacagccaggcccagtattgccagggggac 291
|||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||
Sbjct: 673 agattccgacttggtgtagatccttacagcgacagccaagcccaatattgccagggggac 614
Query: 292 caaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtagtgcggctg 351
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 613 caaaaactggaggatcttgatgacgaactctggggtcttatcctggttgtagtgtggctg 554
Query: 352 cttggggggcgtgtacttcaccttactgggtatcgtggccgcatcaatctcaccgacgag 411
|||||||||||||||||||||||| ||||||| ||||| |||||||| || ||||| |
Sbjct: 553 cttggggggcgtgtacttcaccttggtgggtattgtggctgcatcaatttcgccgactaa 494
Query: 412 gtactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaatcatcggt 471
||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||
Sbjct: 493 gtactcgtccatcattgcacgagcagtggtgctgtgccccacatcttcaaaatcatcagt 434
Query: 472 agcatccttggc 483
||||||||||||
Sbjct: 433 agcatccttggc 422
Score = 113 bits (57), Expect = 2e-023
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 483 cagtggaagacagcaggacatcatcacctccagggtggtcctccagaaacttggtcacat 542
|||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 330 cagtggaagacagcagaacatcatcacctccagggtggtcatccaggaacttggtcacat 271
Query: 543 tgtacacct 551
|||||||||
Sbjct: 270 tgtacacct 262
>gb|CW242990.1|CW242990 104_702_11219641_116_37563_001 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11219641, DNA
sequence
Length = 663
Score = 301 bits (152), Expect = 4e-080
Identities = 194/208 (93%)
Strand = Plus / Minus
Query: 225 actaggcagattccgacttggtgtagatccttacagcaacagccaggcccagtattgcca 284
||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||
Sbjct: 215 actaggcagattccgacttggtgtagatccttacagcgacagccaagcccaatattgcca 156
Query: 285 gggggaccaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtagt 344
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 155 gggggaccaaaaactggaggatcttgatgacgaactctggggtcttatcctggttgtagt 96
Query: 345 gcggctgcttggggggcgtgtacttcaccttactgggtatcgtggccgcatcaatctcac 404
| ||||||||||||||||||||||||||||| |||||| ||||| |||||||| || |
Sbjct: 95 gtggctgcttggggggcgtgtacttcaccttggtgggtactgtggctgcatcaatttcgc 36
Query: 405 cgacgaggtactcgtccatcattgcacg 432
|||| | |||||||||||||||||||||
Sbjct: 35 cgactaagtactcgtccatcattgcacg 8
Score = 40.1 bits (20), Expect = 0.26
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 153 gacagcaaagactcaagtttctga 176
||||||||||||| ||||||||||
Sbjct: 323 gacagcaaagactgaagtttctga 300
>gb|AW677635.1|AW677635 WS1_10_B01.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 485
Score = 280 bits (141), Expect = 2e-073
Identities = 168/177 (94%)
Strand = Plus / Minus
Query: 470 gtagcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcctccaga 529
||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 288 gtagcatccttggcagtggaagacagcagaacatcatcacctccagggtggtcatccagg 229
Query: 530 aacttggtcacattgtacaccttgccgccgatgacgagccagcagtcatccttggtgttg 589
||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 228 aacttggtcacattgtacacctttccgccgatgacgagccagcagtcgtccttggtgttg 169
Query: 590 tgcttggccacctcctcaagggtgtacaccttcgaccccgacatcctcctcttcctc 646
||||||||||||||||| |||||||||||||| ||| ||||||||||| ||||||||
Sbjct: 168 tgcttggccacctcctcgagggtgtacaccttggactccgacatcctcgtcttcctc 112
Score = 40.1 bits (20), Expect = 0.26
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 153 gacagcaaagactcaagtttctga 176
||||||||||||| ||||||||||
Sbjct: 363 gacagcaaagactgaagtttctga 340
>gb|AW677759.1|AW677759 WS1_10_B01.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 460
Score = 280 bits (141), Expect = 2e-073
Identities = 168/177 (94%)
Strand = Plus / Minus
Query: 470 gtagcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcctccaga 529
||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 288 gtagcatccttggcagtggaagacagcagaacatcatcacctccagggtggtcatccagg 229
Query: 530 aacttggtcacattgtacaccttgccgccgatgacgagccagcagtcatccttggtgttg 589
||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 228 aacttggtcacattgtacacctttccgccgatgacgagccagcagtcgtccttggtgttg 169
Query: 590 tgcttggccacctcctcaagggtgtacaccttcgaccccgacatcctcctcttcctc 646
||||||||||||||||| |||||||||||||| ||| ||||||||||| ||||||||
Sbjct: 168 tgcttggccacctcctcgagggtgtacaccttggactccgacatcctcgtcttcctc 112
Score = 40.1 bits (20), Expect = 0.26
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 153 gacagcaaagactcaagtttctga 176
||||||||||||| ||||||||||
Sbjct: 363 gacagcaaagactgaagtttctga 340
>gb|BE917965.1|BE917965 OV1_8_C07.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 244
Score = 266 bits (134), Expect = 2e-069
Identities = 161/170 (94%)
Strand = Plus / Minus
Query: 230 gcagattccgacttggtgtagatccttacagcaacagccaggcccagtattgccaggggg 289
|||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||
Sbjct: 173 gcagattccgacttggtgtagatccttacagcgacagccaagcccaatattgccaggggg 114
Query: 290 accaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtagtgcggc 349
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 113 accaaaaactggaggatcttgatgacgaactctggggtcttatcctggttgtagtgtggc 54
Query: 350 tgcttggggggcgtgtacttcaccttactgggtatcgtggccgcatcaat 399
|||||||||||||||||||||||||| ||||||| ||||| ||||||||
Sbjct: 53 tgcttggggggcgtgtacttcaccttggtgggtattgtggctgcatcaat 4
>gb|CW353735.1|CW353735 fsbb001f016j20k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f016j20, DNA
sequence
Length = 709
Score = 220 bits (111), Expect = 1e-055
Identities = 126/131 (96%)
Strand = Plus / Minus
Query: 225 actaggcagattccgacttggtgtagatccttacagcaacagccaggcccagtattgcca 284
||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||
Sbjct: 131 actaggcagattccgacttggtgtagatccttacagcgacagccaagcccaatattgcca 72
Query: 285 gggggaccaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtagt 344
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 71 gggggaccaaaaactggaggatcttgatgacgaactctggggtcttatcctggttgtagt 12
Query: 345 gcggctgcttg 355
| |||||||||
Sbjct: 11 gtggctgcttg 1
Score = 40.1 bits (20), Expect = 0.26
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 153 gacagcaaagactcaagtttctga 176
||||||||||||| ||||||||||
Sbjct: 239 gacagcaaagactgaagtttctga 216
>gb|CX608128.1|CX608128 ANR1_32_G07.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_32_G07_A002 5', mRNA sequence
Length = 622
Score = 204 bits (103), Expect = 8e-051
Identities = 190/219 (86%)
Strand = Plus / Minus
Query: 395 tcaatctcaccgacgaggtactcgtccatcattgcacgggcggtggtgctgtgccccaca 454
||||| |||||||| | |||||| ||||||||||||||||| ||| |||||||||| |||
Sbjct: 306 tcaatttcaccgaccaagtactcatccatcattgcacgggcagtgttgctgtgcccgaca 247
Query: 455 tcttcgaaatcatcggtagcatccttggcagtggaagacagcaggacatcatcacctcca 514
|| ||||||||||| || |||||||| |||| ||||||| ||| ||||||||||| ||
Sbjct: 246 tcctcgaaatcatcagttgcatccttaccagttgaagacaacagaacatcatcaccccct 187
Query: 515 gggtggtcctccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcag 574
|||||||| |||| |||||| ||||||| || |||||||||||||||| |||||||||
Sbjct: 186 gggtggtcttccaaaaacttcgtcacatcatataccttgccgccgatgatgagccagcaa 127
Query: 575 tcatccttggtgttgtgcttggccacctcctcaagggtg 613
|| |||||||||||||||||||| || ||||| ||||||
Sbjct: 126 tcctccttggtgttgtgcttggcgacgtcctcgagggtg 88
Score = 172 bits (87), Expect = 3e-041
Identities = 120/131 (91%)
Strand = Plus / Minus
Query: 230 gcagattccgacttggtgtagatccttacagcaacagccaggcccagtattgccaggggg 289
||||| |||||||||||||| ||||| || ||||||||||||||||| |||||||||||
Sbjct: 471 gcagactccgacttggtgtacatcctaacggcaacagccaggcccaggattgccagggga 412
Query: 290 accaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtagtgcggc 349
||||||||||||||||||||||| || ||||| |||||||| |||||||||||||||||
Sbjct: 411 accaaaaactggaggatcttgataacaaactcgggggtcttgtcctggttgtagtgcggt 352
Query: 350 tgcttgggggg 360
|||||||||||
Sbjct: 351 tgcttgggggg 341
>gb|CX611965.1|CX611965 ANR1_27_F01.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_27_F01_A002 5', mRNA sequence
Length = 632
Score = 204 bits (103), Expect = 8e-051
Identities = 190/219 (86%)
Strand = Plus / Minus
Query: 395 tcaatctcaccgacgaggtactcgtccatcattgcacgggcggtggtgctgtgccccaca 454
||||| |||||||| | |||||| ||||||||||||||||| ||| |||||||||| |||
Sbjct: 320 tcaatttcaccgaccaagtactcatccatcattgcacgggcagtgttgctgtgcccgaca 261
Query: 455 tcttcgaaatcatcggtagcatccttggcagtggaagacagcaggacatcatcacctcca 514
|| ||||||||||| || |||||||| |||| ||||||| ||| ||||||||||| ||
Sbjct: 260 tcctcgaaatcatcagttgcatccttaccagttgaagacaacagaacatcatcaccccct 201
Query: 515 gggtggtcctccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcag 574
|||||||| |||| |||||| ||||||| || |||||||||||||||| |||||||||
Sbjct: 200 gggtggtcttccaaaaacttcgtcacatcatataccttgccgccgatgatgagccagcaa 141
Query: 575 tcatccttggtgttgtgcttggccacctcctcaagggtg 613
|| |||||||||||||||||||| || ||||| ||||||
Sbjct: 140 tcctccttggtgttgtgcttggcgacgtcctcgagggtg 102
Score = 172 bits (87), Expect = 3e-041
Identities = 120/131 (91%)
Strand = Plus / Minus
Query: 230 gcagattccgacttggtgtagatccttacagcaacagccaggcccagtattgccaggggg 289
||||| |||||||||||||| ||||| || ||||||||||||||||| |||||||||||
Sbjct: 485 gcagactccgacttggtgtacatcctaacggcaacagccaggcccaggattgccagggga 426
Query: 290 accaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtagtgcggc 349
||||||||||||||||||||||| || ||||| |||||||| |||||||||||||||||
Sbjct: 425 accaaaaactggaggatcttgataacaaactcgggggtcttgtcctggttgtagtgcggt 366
Query: 350 tgcttgggggg 360
|||||||||||
Sbjct: 365 tgcttgggggg 355
>gb|DN551858.1|DN551858 pSPR-RT-MR-H1_C06_C262 pSPR Sorghum propinquum cDNA, mRNA sequence
Length = 708
Score = 204 bits (103), Expect = 8e-051
Identities = 190/219 (86%)
Strand = Plus / Plus
Query: 395 tcaatctcaccgacgaggtactcgtccatcattgcacgggcggtggtgctgtgccccaca 454
||||| |||||||| | |||||| |||||||| |||||||| ||| |||||||||| |||
Sbjct: 396 tcaatttcaccgaccaagtactcatccatcatcgcacgggcagtgttgctgtgcccgaca 455
Query: 455 tcttcgaaatcatcggtagcatccttggcagtggaagacagcaggacatcatcacctcca 514
|| ||||||||||| || ||||||||| |||| ||||||| ||| ||||||||||| ||
Sbjct: 456 tcctcgaaatcatcagttgcatccttgccagttgaagacaacagaacatcatcaccccct 515
Query: 515 gggtggtcctccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcag 574
|||||||| |||| |||||| ||||||| || |||||||||||||||| |||||||||
Sbjct: 516 gggtggtcttccaaaaacttcgtcacatcatataccttgccgccgatgatgagccagcaa 575
Query: 575 tcatccttggtgttgtgcttggccacctcctcaagggtg 613
|| |||||||||||||||||||| || ||||| ||||||
Sbjct: 576 tcctccttggtgttgtgcttggcgacgtcctcgagggtg 614
Score = 172 bits (87), Expect = 3e-041
Identities = 120/131 (91%)
Strand = Plus / Plus
Query: 230 gcagattccgacttggtgtagatccttacagcaacagccaggcccagtattgccaggggg 289
||||| |||||||||||||| ||||| || ||||||||||||||||| |||||||||||
Sbjct: 231 gcagactccgacttggtgtacatcctaacggcaacagccaggcccaggattgccagggga 290
Query: 290 accaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtagtgcggc 349
||||||||||||||||||||||| || ||||| |||||||| |||||||||||||||||
Sbjct: 291 accaaaaactggaggatcttgataacaaactcgggggtcttgtcctggttgtagtgcggt 350
Query: 350 tgcttgggggg 360
|||||||||||
Sbjct: 351 tgcttgggggg 361
>gb|CW481091.1|CW481091 fsbb001f240h16f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f240h16, DNA
sequence
Length = 662
Score = 200 bits (101), Expect = 1e-049
Identities = 123/129 (95%), Gaps = 1/129 (0%)
Strand = Plus / Plus
Query: 225 actaggcagattccgacttggtgtagatccttacagcaacagccaggcccagtattgcca 284
||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||
Sbjct: 534 actaggcagattccgacttggtgtagatccttacagcgacagccaagcccaatattgcca 593
Query: 285 ggggg-accaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtag 343
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 594 ggggggaccaaaaactggaggatcttgatgacgaactctggggtcttatcctggttgtag 653
Query: 344 tgcggctgc 352
|| ||||||
Sbjct: 654 tgtggctgc 662
Score = 40.1 bits (20), Expect = 0.26
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 153 gacagcaaagactcaagtttctga 176
||||||||||||| ||||||||||
Sbjct: 426 gacagcaaagactgaagtttctga 449
>gb|BQ656077.1|BQ656077 pRC0409 Sorghum halepense rhizome cDNA library Sorghum halepense
cDNA clone pRC0409, mRNA sequence
Length = 496
Score = 180 bits (91), Expect = 1e-043
Identities = 187/219 (85%)
Strand = Plus / Minus
Query: 395 tcaatctcaccgacgaggtactcgtccatcattgcacgggcggtggtgctgtgccccaca 454
||||| |||||||| | |||||| ||||||||||||||| ||||| | |||||||| |||
Sbjct: 435 tcaatttcaccgaccaagtactcatccatcattgcacggacggtgttactgtgcccaaca 376
Query: 455 tcttcgaaatcatcggtagcatccttggcagtggaagacagcaggacatcatcacctcca 514
|| ||||||||||| || ||||||||| |||| || ||| ||| ||||||||||| ||
Sbjct: 375 tcctcgaaatcatcagttgcatccttgccagttgagtacaacagaacatcatcaccccct 316
Query: 515 gggtggtcctccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcag 574
|||||||| |||| |||||| ||||||| || |||||||||||||||| |||||||||
Sbjct: 315 gggtggtcttccaaaaacttcgtcacatcatataccttgccgccgatgatgagccagcaa 256
Query: 575 tcatccttggtgttgtgcttggccacctcctcaagggtg 613
|| |||||||||||||||||| | || ||||| ||||||
Sbjct: 255 tcctccttggtgttgtgcttgacgacgtcctcgagggtg 217
>gb|CF074204.1|CF074204 FE1_23_F08.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_23_F08_A002 3', mRNA sequence
Length = 596
Score = 172 bits (87), Expect = 3e-041
Identities = 120/131 (91%)
Strand = Plus / Minus
Query: 230 gcagattccgacttggtgtagatccttacagcaacagccaggcccagtattgccaggggg 289
||||| |||||||||||||| ||||| || ||||||||||||||||| |||||||||||
Sbjct: 355 gcagactccgacttggtgtacatcctaacggcaacagccaggcccaggattgccagggga 296
Query: 290 accaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtagtgcggc 349
||||||||||||||||||||||| || ||||| |||||||| |||||||||||||||||
Sbjct: 295 accaaaaactggaggatcttgataacaaactcgggggtcttgtcctggttgtagtgcggt 236
Query: 350 tgcttgggggg 360
|||||||||||
Sbjct: 235 tgcttgggggg 225
Score = 170 bits (86), Expect = 1e-040
Identities = 164/190 (86%)
Strand = Plus / Minus
Query: 395 tcaatctcaccgacgaggtactcgtccatcattgcacgggcggtggtgctgtgccccaca 454
||||| |||||||| | |||||| ||||||||||||||||| ||| |||||||||| |||
Sbjct: 190 tcaatttcaccgaccaagtactcatccatcattgcacgggcagtgttgctgtgcccgaca 131
Query: 455 tcttcgaaatcatcggtagcatccttggcagtggaagacagcaggacatcatcacctcca 514
|| ||||||||||| || |||||||| |||| ||||||| ||| ||||||||||| ||
Sbjct: 130 tcctcgaaatcatcagttgcatccttaccagttgaagacaacagaacatcatcaccccct 71
Query: 515 gggtggtcctccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcag 574
|||||||| |||| |||||| ||||||| || |||||||||||||||| |||||||||
Sbjct: 70 gggtggtcttccaaaaacttcgtcacatcatataccttgccgccgatgatgagccagcaa 11
Query: 575 tcatccttgg 584
|| |||||||
Sbjct: 10 tcctccttgg 1
>gb|AI724948.1|AI724948 RHIZ1_31_H01.y3_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 353
Score = 157 bits (79), Expect = 2e-036
Identities = 118/131 (90%)
Strand = Plus / Minus
Query: 230 gcagattccgacttggtgtagatccttacagcaacagccaggcccagtattgccaggggg 289
||||| |||||||||||||| ||||| || ||||||||||||||||| |||| ||||||
Sbjct: 148 gcagactccgacttggtgtacatcctaacggcaacagccaggcccaggattgtcagggga 89
Query: 290 accaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtagtgcggc 349
||||||||||||||||||||||| || ||||| |||||||| |||||||||||||| ||
Sbjct: 88 accaaaaactggaggatcttgataacaaactcgggggtcttgtcctggttgtagtgtggt 29
Query: 350 tgcttgggggg 360
|||||||||||
Sbjct: 28 tgcttgggggg 18
>gb|CW357147.1|CW357147 fsbb001f023j24k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f023j24, DNA
sequence
Length = 728
Score = 149 bits (75), Expect = 4e-034
Identities = 93/99 (93%)
Strand = Plus / Minus
Query: 548 accttgccgccgatgacgagccagcagtcatccttggtgttgtgcttggccacctcctca 607
||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 214 acctttccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcctcg 155
Query: 608 agggtgtacaccttcgaccccgacatcctcctcttcctc 646
|||||||||||||| ||| ||||||||||| ||||||||
Sbjct: 154 agggtgtacaccttggactccgacatcctcgtcttcctc 116
>gb|CF430905.1|CF430905 NIT1_1_C04.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_1_C04_A002 5', mRNA sequence
Length = 458
Score = 149 bits (75), Expect = 4e-034
Identities = 93/99 (93%)
Strand = Plus / Minus
Query: 548 accttgccgccgatgacgagccagcagtcatccttggtgttgtgcttggccacctcctca 607
||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 236 acctttccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcctcg 177
Query: 608 agggtgtacaccttcgaccccgacatcctcctcttcctc 646
|||||||||||||| ||| ||||||||||| ||||||||
Sbjct: 176 agggtgtacaccttggactccgacatcctcatcttcctc 138
>gb|CF675654.1|CF675654 cytB5 Subtractive cDNA library from sorghum infested by greenbug
aphids Sorghum bicolor cDNA clone cytB5 similar to
Cytochrome B5, mRNA sequence
Length = 142
Score = 147 bits (74), Expect = 2e-033
Identities = 101/110 (91%)
Strand = Plus / Minus
Query: 251 atccttacagcaacagccaggcccagtattgccagggggaccaaaaactggaggatcttg 310
||||| || ||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 140 atcctaacggcaacagccaggcccaggattgccaggggaaccaaaaactggaggatcttg 81
Query: 311 atgacgaactccggggtcttatcctggttgtagtgcggctgcttgggggg 360
|| || ||||| |||||||| ||||||||||||||||| |||||||||||
Sbjct: 80 ataacaaactcgggggtcttgtcctggttgtagtgcggttgcttgggggg 31
>gb|BE593285.1|BE593285 WS1_99_H07.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 181
Score = 89.7 bits (45), Expect = 3e-016
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 529 aaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcatccttggtgtt 588
|||||| ||||||| || |||||||||||||||| ||||||||| || |||||||||||
Sbjct: 169 aaacttcgtcacatcatataccttgccgccgatgatgagccagcaatcctccttggtgtt 110
Query: 589 gtgcttggccacctcctcaagggtg 613
||||||||| || ||||| ||||||
Sbjct: 109 gtgcttggcgacatcctcgagggtg 85
>gb|CW101543.1|CW101543 104_469_11004708_148_34411_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11004708, DNA
sequence
Length = 379
Score = 83.8 bits (42), Expect = 2e-014
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 548 accttgccgccgatgacgagccagcagtcatccttggtgttgtgcttggccacctcctca 607
|||||||||||||||| ||||||||| || |||||||||||||||||||| || |||||
Sbjct: 223 accttgccgccgatgatgagccagcaatcctccttggtgttgtgcttggcgacgtcctcg 282
Query: 608 agggtg 613
||||||
Sbjct: 283 agggtg 288
>gb|CF755930.1|CF755930 DSAF1_2_F09.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_2_F09_A011 5', mRNA sequence
Length = 619
Score = 81.8 bits (41), Expect = 8e-014
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 512 ccagggtggtcctccagaaacttggtcacattgtacaccttgccgccgatgacgagccag 571
|||||||||||||||| ||||||||||||| ||||||||||||||||||| || ||||
Sbjct: 315 ccagggtggtcctccaagaacttggtcacatcatacaccttgccgccgatgatgacccag 256
Query: 572 cagtc 576
|||||
Sbjct: 255 cagtc 251
>gb|CF755994.1|CF755994 DSAF1_2_F09.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_2_F09_A011 3', mRNA sequence
Length = 607
Score = 81.8 bits (41), Expect = 8e-014
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 512 ccagggtggtcctccagaaacttggtcacattgtacaccttgccgccgatgacgagccag 571
|||||||||||||||| ||||||||||||| ||||||||||||||||||| || ||||
Sbjct: 71 ccagggtggtcctccaagaacttggtcacatcatacaccttgccgccgatgatgacccag 12
Query: 572 cagtc 576
|||||
Sbjct: 11 cagtc 7
>gb|BZ421854.1|BZ421854 id46f06.b1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone id46f06 5', DNA sequence
Length = 669
Score = 75.8 bits (38), Expect = 5e-012
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 548 accttgccgccgatgacgagccagcagtcatccttggtgttgtgcttggc 597
|||||||||||||||| ||||||||| || ||||||||||||||||||||
Sbjct: 620 accttgccgccgatgatgagccagcaatcctccttggtgttgtgcttggc 669
>gb|CW274559.1|CW274559 104_747_11404489_148_35372_007 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11404489, DNA
sequence
Length = 659
Score = 48.1 bits (24), Expect = 0.001
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 512 ccagggtggtcctccagaaacttggtcacattgtacacct 551
|||||||||||||||| ||||||||||||| |||||||
Sbjct: 446 ccagggtggtcctccaagaacttggtcacatcatacacct 485
Score = 40.1 bits (20), Expect = 0.26
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 549 ccttgccgccgatgacgagccagcagtc 576
||||||||||||||| || |||||||||
Sbjct: 602 ccttgccgccgatgatgacccagcagtc 629
>gb|CF759156.1|CF759156 DSAF1_41_F12.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_41_F12_A011 5', mRNA sequence
Length = 512
Score = 44.1 bits (22), Expect = 0.017
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 544 gtacaccttgccgccgatgacgagccagca 573
||||||||||||| |||||| |||||||||
Sbjct: 181 gtacaccttgccggcgatgatgagccagca 152
>gb|CW038963.1|CW038963 104_271_10505218_115_30388 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10505218, DNA
sequence
Length = 264
Score = 42.1 bits (21), Expect = 0.066
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 633 tcctcctcttcctcttcctct 653
|||||||||||||||||||||
Sbjct: 261 tcctcctcttcctcttcctct 241
>gb|DV162820.1|DV162820 P3-G6 Sorghum bicolor greenbug-responsive cDNA library Sorghum
bicolor cDNA 5', mRNA sequence
Length = 223
Score = 42.1 bits (21), Expect = 0.066
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 662 cgtacctgcccgggcggccgc 682
|||||||||||||||||||||
Sbjct: 99 cgtacctgcccgggcggccgc 119
>gb|CL154161.1|CL154161 104_339_10781206_114_31371_070 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10781206, DNA
sequence
Length = 728
Score = 40.1 bits (20), Expect = 0.26
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 634 cctcctcttcctcttcctct 653
||||||||||||||||||||
Sbjct: 122 cctcctcttcctcttcctct 141
>gb|CL159316.1|CL159316 104_348_10804164_114_31379_372 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10804164, DNA
sequence
Length = 705
Score = 40.1 bits (20), Expect = 0.26
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 634 cctcctcttcctcttcctct 653
||||||||||||||||||||
Sbjct: 360 cctcctcttcctcttcctct 379
>gb|CL175718.1|CL175718 104_381_10892638_148_31764_238 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10892638, DNA
sequence
Length = 604
Score = 40.1 bits (20), Expect = 0.26
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 633 tcctcctcttcctcttcctc 652
||||||||||||||||||||
Sbjct: 105 tcctcctcttcctcttcctc 86
>gb|CL181870.1|CL181870 104_393_10897036_148_31921_028 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10897036, DNA
sequence
Length = 647
Score = 40.1 bits (20), Expect = 0.26
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 633 tcctcctcttcctcttcctc 652
||||||||||||||||||||
Sbjct: 275 tcctcctcttcctcttcctc 294
>gb|CW093680.1|CW093680 104_457_10999924_116_37476_016 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10999924, DNA
sequence
Length = 546
Score = 40.1 bits (20), Expect = 0.26
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 633 tcctcctcttcctcttcctc 652
||||||||||||||||||||
Sbjct: 181 tcctcctcttcctcttcctc 200
>gb|CW102554.1|CW102554 104_470_11011404_148_34413_034 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11011404, DNA
sequence
Length = 243
Score = 40.1 bits (20), Expect = 0.26
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 633 tcctcctcttcctcttcctc 652
||||||||||||||||||||
Sbjct: 27 tcctcctcttcctcttcctc 46
>gb|CW165655.1|CW165655 104_574_11152623_148_36480_062 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11152623, DNA
sequence
Length = 644
Score = 40.1 bits (20), Expect = 0.26
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 634 cctcctcttcctcttcctct 653
||||||||||||||||||||
Sbjct: 267 cctcctcttcctcttcctct 248
>gb|CW177578.1|CW177578 104_591_11159102_148_36609_063 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11159102, DNA
sequence
Length = 603
Score = 40.1 bits (20), Expect = 0.26
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 549 ccttgccgccgatgacgagccagcagtc 576
||||||||||||||| || |||||||||
Sbjct: 111 ccttgccgccgatgatgacccagcagtc 138
>gb|CW239438.1|CW239438 104_697_11217657_148_37506_035 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11217657, DNA
sequence
Length = 679
Score = 40.1 bits (20), Expect = 0.26
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 634 cctcctcttcctcttcctct 653
||||||||||||||||||||
Sbjct: 384 cctcctcttcctcttcctct 365
>gb|CW240529.1|CW240529 104_699_11218266_116_37548_075 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11218266, DNA
sequence
Length = 430
Score = 40.1 bits (20), Expect = 0.26
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 633 tcctcctcttcctcttcctc 652
||||||||||||||||||||
Sbjct: 261 tcctcctcttcctcttcctc 280
>gb|CW240530.1|CW240530 104_699_11218266_148_37539_075 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11218266, DNA
sequence
Length = 652
Score = 40.1 bits (20), Expect = 0.26
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 633 tcctcctcttcctcttcctc 652
||||||||||||||||||||
Sbjct: 533 tcctcctcttcctcttcctc 514
>gb|CW262685.1|CW262685 104_730_11230215_148_35221_058 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11230215, DNA
sequence
Length = 654
Score = 40.1 bits (20), Expect = 0.26
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 634 cctcctcttcctcttcctct 653
||||||||||||||||||||
Sbjct: 172 cctcctcttcctcttcctct 191
>gb|CW272101.1|CW272101 104_744_11403297_148_35352_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11403297, DNA
sequence
Length = 426
Score = 40.1 bits (20), Expect = 0.26
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 633 tcctcctcttcctcttcctc 652
||||||||||||||||||||
Sbjct: 166 tcctcctcttcctcttcctc 147
>gb|CW272102.1|CW272102 104_744_11403297_148_36226_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11403297, DNA
sequence
Length = 634
Score = 40.1 bits (20), Expect = 0.26
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 633 tcctcctcttcctcttcctc 652
||||||||||||||||||||
Sbjct: 169 tcctcctcttcctcttcctc 150
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 199,702
Number of Sequences: 832831
Number of extensions: 199702
Number of successful extensions: 57508
Number of sequences better than 0.5: 79
Number of HSP's better than 0.5 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57299
Number of HSP's gapped (non-prelim): 189
length of query: 682
length of database: 491,359,669
effective HSP length: 19
effective length of query: 663
effective length of database: 475,535,880
effective search space: 315280288440
effective search space used: 315280288440
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)