BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.65
(673 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG488416.1|BG488416 RHIZ2_63_D10.b1_A003 Rhizome2 (RHIZ2... 682 0.0
gb|BG240440.1|BG240440 OV1_30_A12.b1_A002 Ovary 1 (OV1) Sor... 674 0.0
gb|CW128767.1|CW128767 104_510_11114194_148_34755_039 Sorgh... 640 0.0
gb|BG488106.1|BG488106 RHIZ2_63_D10.g1_A003 Rhizome2 (RHIZ2... 609 e-172
gb|BE917707.1|BE917707 OV1_6_B04.b1_A002 Ovary 1 (OV1) Sorg... 597 e-169
gb|CW129063.1|CW129063 104_511_11114353_148_34760_015 Sorgh... 583 e-165
gb|CW188377.1|CW188377 104_608_11172997_148_36734_061 Sorgh... 583 e-165
gb|CW319235.1|CW319235 104_811_11474377_148_35884_003 Sorgh... 579 e-163
gb|CW417908.1|CW417908 fsbb001f121c05f0 Sorghum methylation... 579 e-163
gb|BE355360.1|BE355360 DG1_114_A03.b1_A002 Dark Grown 1 (DG... 579 e-163
gb|CD213713.1|CD213713 HS1_52_G12.g1_A012 Heat-shocked seed... 575 e-162
gb|CW191309.1|CW191309 104_613_11178426_116_36942_075 Sorgh... 573 e-162
gb|BE917630.1|BE917630 OV1_6_B04.g1_A002 Ovary 1 (OV1) Sorg... 569 e-160
gb|BZ341857.1|BZ341857 ic79b05.g1 WGS-SbicolorF (JM107 adap... 559 e-157
gb|CW155043.1|CW155043 104_557_11145924_116_36362_042 Sorgh... 559 e-157
gb|CX606979.1|CX606979 ANR1_6_B05.b1_A002 Anaerobic roots S... 559 e-157
gb|CX607063.1|CX607063 ANR1_6_B05.g1_A002 Anaerobic roots S... 559 e-157
gb|CX610420.1|CX610420 ANR1_18_D02.g1_A002 Anaerobic roots ... 559 e-157
gb|CW410848.1|CW410848 fsbb001f105m09k0 Sorghum methylation... 551 e-155
gb|BF480763.1|BF480763 FM1_14_F11.g1_A003 Floral-Induced Me... 549 e-154
gb|CW183462.1|CW183462 104_599_11164629_148_36672_089 Sorgh... 545 e-153
gb|CD462726.1|CD462726 ETH1_39_B03.g1_A002 Ethylene-treated... 545 e-153
gb|CD464058.1|CD464058 ETH1_48_H05.b1_A002 Ethylene-treated... 545 e-153
gb|AW745446.1|AW745446 WS1_34_A02.b1_A002 Water-stressed 1 ... 529 e-148
gb|BG411209.1|BG411209 EM1_27_A01.b1_A002 Embryo 1 (EM1) So... 529 e-148
gb|CD213618.1|CD213618 HS1_52_G12.b1_A012 Heat-shocked seed... 529 e-148
gb|CL152064.1|CL152064 104_335_10779694_116_31364_094 Sorgh... 523 e-147
gb|BF480894.1|BF480894 FM1_14_F11.b1_A003 Floral-Induced Me... 521 e-146
gb|AI724175.1|AI724175 RHIZ1_8_A04.y2_A001 Rhizome1 (RHIZ1)... 509 e-142
gb|AW680031.1|AW680031 WS1_34_A02.g1_A002 Water-stressed 1 ... 505 e-141
gb|CW155044.1|CW155044 104_557_11145924_148_36361_042 Sorgh... 500 e-140
gb|BE355526.1|BE355526 DG1_114_A03.g1_A002 Dark Grown 1 (DG... 498 e-139
gb|BG410872.1|BG410872 EM1_27_A01.g1_A002 Embryo 1 (EM1) So... 498 e-139
gb|BE599532.1|BE599532 PI1_88_F07.b1_A002 Pathogen induced ... 496 e-138
gb|CW297850.1|CW297850 104_780_11462260_116_35647_012 Sorgh... 490 e-137
gb|CW410847.1|CW410847 fsbb001f105m09f0 Sorghum methylation... 490 e-137
gb|BG102543.1|BG102543 RHIZ2_34_D04.g1_A003 Rhizome2 (RHIZ2... 490 e-137
gb|BF704683.1|BF704683 FM1_50_B08.b1_A003 Floral-Induced Me... 482 e-134
gb|AI723845.1|AI723845 RHIZ1_28_B06.y1_A001 Rhizome1 (RHIZ1... 478 e-133
gb|BE355445.1|BE355445 DG1_114_A03.b2_A002 Dark Grown 1 (DG... 478 e-133
gb|CW306661.1|CW306661 104_792_11466961_148_35713_007 Sorgh... 476 e-132
gb|BG052252.1|BG052252 RHIZ2_12_B05.g1_A003 Rhizome2 (RHIZ2... 468 e-130
gb|CN150853.1|CN150853 WOUND1_71_G11.g1_A002 Wounded leaves... 466 e-129
gb|BF481909.1|BF481909 FM1_22_H04.g1_A003 Floral-Induced Me... 462 e-128
gb|BF656458.1|BF656458 FM1_50_B08.g1_A003 Floral-Induced Me... 462 e-128
gb|AW564395.1|AW564395 LG1_292_F12.b1_A002 Light Grown 1 (L... 458 e-127
gb|BE593143.1|BE593143 WS1_98_A10.g1_A002 Water-stressed 1 ... 458 e-127
gb|CD431873.1|CD431873 ETH1_11_A02.g1_A002 Ethylene-treated... 458 e-127
gb|BE357369.1|BE357369 DG1_148_A05.g1_A002 Dark Grown 1 (DG... 454 e-126
gb|CD432572.1|CD432572 ETH1_30_E04.g1_A002 Ethylene-treated... 454 e-126
gb|CN126047.1|CN126047 RHOH1_14_H01.g1_A002 Acid- and alkal... 450 e-125
gb|CX608442.1|CX608442 ANR1_38_D08.g1_A002 Anaerobic roots ... 450 e-125
gb|CW182557.1|CW182557 104_598_11164141_116_36663_061 Sorgh... 448 e-124
gb|CF071274.1|CF071274 FE1_16_D02.g1_A002 Iron-deficient se... 448 e-124
gb|CF431776.1|CF431776 NIT1_9_B03.b1_A002 Nitrogen-deficien... 446 e-123
gb|CN125957.1|CN125957 RHOH1_14_H01.b1_A002 Acid- and alkal... 446 e-123
gb|CX607748.1|CX607748 ANR1_30_B07.g1_A002 Anaerobic roots ... 446 e-123
gb|BE592378.1|BE592378 WS1_94_A05.g1_A002 Water-stressed 1 ... 440 e-122
gb|AI724242.1|AI724242 RHIZ1_8_B12.y2_A001 Rhizome1 (RHIZ1)... 438 e-121
gb|CW361905.1|CW361905 fsbb001f030l13f0 Sorghum methylation... 432 e-119
gb|BE599367.1|BE599367 PI1_88_F07.g1_A002 Pathogen induced ... 424 e-117
gb|CW463246.1|CW463246 fsbb001f211m02f0 Sorghum methylation... 420 e-116
gb|CF071535.1|CF071535 FE1_17_C03.b1_A002 Iron-deficient se... 420 e-116
gb|CF072752.1|CF072752 FE1_25_E07.g1_A002 Iron-deficient se... 416 e-114
gb|CX607662.1|CX607662 ANR1_30_B07.b1_A002 Anaerobic roots ... 414 e-114
gb|CW112587.1|CW112587 104_486_11104970_116_34548_007 Sorgh... 412 e-113
gb|BE593453.1|BE593453 WS1_98_A10.b1_A002 Water-stressed 1 ... 412 e-113
gb|BG049237.1|BG049237 OV1_17_D01.g1_A002 Ovary 1 (OV1) Sor... 412 e-113
gb|CW156116.1|CW156116 104_558_11146509_148_36368_081 Sorgh... 400 e-110
gb|CW317075.1|CW317075 104_808_11473223_116_35851_084 Sorgh... 400 e-110
gb|BE592516.1|BE592516 WS1_94_A05.b1_A002 Water-stressed 1 ... 400 e-110
gb|CW105327.1|CW105327 104_474_11012845_116_34450_053 Sorgh... 396 e-108
gb|CW394994.1|CW394994 fsbb001f082n15f0 Sorghum methylation... 396 e-108
gb|BF482021.1|BF482021 FM1_22_H04.b1_A003 Floral-Induced Me... 387 e-105
gb|BG049096.1|BG049096 OV1_23_C04.g1_A002 Ovary 1 (OV1) Sor... 385 e-105
gb|CF484983.1|CF484983 POL1_28_F02.g1_A002 Pollen Sorghum b... 381 e-104
gb|CF431835.1|CF431835 NIT1_9_B03.g1_A002 Nitrogen-deficien... 373 e-101
gb|BG048803.1|BG048803 OV1_23_C04.b1_A002 Ovary 1 (OV1) Sor... 369 e-100
gb|BG052312.1|BG052312 RHIZ2_12_B05.b1_A003 Rhizome2 (RHIZ2... 365 3e-099
gb|BG102866.1|BG102866 RHIZ2_34_D04.b1_A003 Rhizome2 (RHIZ2... 365 3e-099
gb|CF772707.1|CF772707 DSBF1_38_D05.g1_A010 Drought-stresse... 361 5e-098
gb|CW070741.1|CW070741 104_322_10590964_114_30544 Sorghum m... 357 9e-097
gb|AW286565.1|AW286565 LG1_334_E01.g1_A002 Light Grown 1 (L... 355 3e-096
gb|CF074009.1|CF074009 FE1_9_D12.g1_A002 Iron-deficient see... 337 8e-091
gb|CN150769.1|CN150769 WOUND1_71_G11.b1_A002 Wounded leaves... 327 8e-088
gb|CW088567.1|CW088567 104_433_10948227_116_32575_006 Sorgh... 323 1e-086
gb|CW432220.1|CW432220 fsbb001f146m24f0 Sorghum methylation... 317 7e-085
gb|CW191310.1|CW191310 104_613_11178426_148_36941_075 Sorgh... 315 3e-084
gb|CW306660.1|CW306660 104_792_11466961_116_35709_007 Sorgh... 313 1e-083
gb|CW490111.1|CW490111 fsbb001f275g08k0 Sorghum methylation... 303 1e-080
gb|CW182558.1|CW182558 104_598_11164141_148_36664_061 Sorgh... 295 3e-078
gb|CW227263.1|CW227263 104_665_11205321_148_37224_037 Sorgh... 293 1e-077
gb|AW677105.1|AW677105 DG1_4_H07.b1_A002 Dark Grown 1 (DG1)... 293 1e-077
gb|AI724884.1|AI724884 RHIZ1_30_G03.y3_A001 Rhizome1 (RHIZ1... 291 4e-077
gb|BG240054.1|BG240054 OV1_17_D01.b1_A002 Ovary 1 (OV1) Sor... 287 7e-076
gb|BF704815.1|BF704815 FM1_51_H04.b1_A003 Floral-Induced Me... 285 3e-075
gb|CL159717.1|CL159717 104_349_10804465_114_31381_289 Sorgh... 280 2e-073
gb|CW105328.1|CW105328 104_474_11012845_148_34446_053 Sorgh... 280 2e-073
gb|BG558204.1|BG558204 RHIZ2_64_D04.b1_A003 Rhizome2 (RHIZ2... 278 6e-073
gb|CD431850.1|CD431850 ETH1_11_D10.g1_A002 Ethylene-treated... 256 2e-066
gb|CW394995.1|CW394995 fsbb001f082n15k0 Sorghum methylation... 240 1e-061
gb|CW104944.1|CW104944 104_474_11012677_148_34448_061 Sorgh... 224 8e-057
gb|BF656582.1|BF656582 FM1_51_H04.g1_A003 Floral-Induced Me... 220 1e-055
gb|CW415400.1|CW415400 fsbb001f115h21f0 Sorghum methylation... 216 2e-054
gb|CW424980.1|CW424980 fsbb001f135j06f0 Sorghum methylation... 200 1e-049
gb|AI723852.1|AI723852 RHIZ1_28_C06.y1_A001 Rhizome1 (RHIZ1... 200 1e-049
gb|CF430869.1|CF430869 NIT1_1_E01.b1_A002 Nitrogen-deficien... 198 5e-049
gb|BG560769.1|BG560769 RHIZ2_64_D04.g1_A003 Rhizome2 (RHIZ2... 194 7e-048
gb|CW088569.1|CW088569 104_433_10948227_251_32621_006 Sorgh... 192 3e-047
gb|CW344083.1|CW344083 104_846_11487770_116_36196_005 Sorgh... 188 5e-046
gb|CW113300.1|CW113300 104_487_11105369_148_34551_071 Sorgh... 180 1e-043
gb|AI724525.1|AI724525 RHIZ1_37_E01.y1_A001 Rhizome1 (RHIZ1... 170 1e-040
gb|CW070742.1|CW070742 104_322_10590964_116_30543 Sorghum m... 153 2e-035
gb|CW238284.1|CW238284 104_695_11216646_148_37417_029 Sorgh... 153 2e-035
gb|BE353104.1|BE353104 DG1_4_H07.g1_A002 Dark Grown 1 (DG1)... 141 9e-032
gb|CW104943.1|CW104943 104_474_11012677_116_34452_061 Sorgh... 135 6e-030
gb|CW049116.1|CW049116 104_288_10513836_114_30200 Sorghum m... 131 9e-029
gb|CW317076.1|CW317076 104_808_11473223_148_35855_084 Sorgh... 109 3e-022
gb|CW424981.1|CW424981 fsbb001f135j06k0 Sorghum methylation... 101 8e-020
gb|CF483259.1|CF483259 POL1_21_A09.b1_A002 Pollen Sorghum b... 98 1e-018
gb|CL152063.1|CL152063 104_335_10779694_114_31363_094 Sorgh... 82 8e-014
gb|CW415401.1|CW415401 fsbb001f115h21k0 Sorghum methylation... 78 1e-012
gb|CW105329.1|CW105329 104_474_11012845_148_34479_053 Sorgh... 76 5e-012
gb|CF434162.1|CF434162 NIT1_32_H03.g1_A002 Nitrogen-deficie... 70 3e-010
gb|CL179294.1|CL179294 104_388_10895213_148_31909_125 Sorgh... 68 1e-009
gb|BE358843.1|BE358843 DG1_32_D03.g1_A002 Dark Grown 1 (DG1... 64 2e-008
gb|AW282719.1|AW282719 LG1_292_F12.g1_A002 Light Grown 1 (L... 58 1e-006
gb|CL170389.1|CL170389 104_371_10813777_116_31791_097 Sorgh... 50 3e-004
gb|CL186013.1|CL186013 104_400_10899928_116_32405_056 Sorgh... 50 3e-004
gb|CW233439.1|CW233439 104_686_11213422_116_37376_085 Sorgh... 50 3e-004
gb|CW252274.1|CW252274 104_715_11224407_116_35096_060 Sorgh... 50 3e-004
gb|CW278768.1|CW278768 104_753_11406722_116_35426_009 Sorgh... 50 3e-004
gb|CD431824.1|CD431824 ETH1_11_A02.b1_A002 Ethylene-treated... 50 3e-004
gb|CW270180.1|CW270180 104_741_11402269_116_35322_051 Sorgh... 42 0.065
gb|CW501775.1|CW501775 fsbb001f297m13f0 Sorghum methylation... 42 0.065
gb|CD429249.1|CD429249 ETH1_3_D10.b1_A002 Ethylene-treated ... 42 0.065
gb|CD462379.1|CD462379 ETH1_37_G05.b1_A002 Ethylene-treated... 42 0.065
gb|CD463994.1|CD463994 ETH1_48_G02.b1_A002 Ethylene-treated... 42 0.065
gb|CF072480.1|CF072480 FE1_3_E09.b1_A002 Iron-deficient see... 42 0.065
gb|CN124171.1|CN124171 RHOH1_3_C05.b1_A002 Acid- and alkali... 42 0.065
gb|CN124309.1|CN124309 RHOH1_4_A05.b1_A002 Acid- and alkali... 42 0.065
gb|CN125681.1|CN125681 RHOH1_12_C12.g1_A002 Acid- and alkal... 42 0.065
gb|CN126470.1|CN126470 RHOH1_17_G12.b1_A002 Acid- and alkal... 42 0.065
gb|CN126504.1|CN126504 RHOH1_17_C04.g1_A002 Acid- and alkal... 42 0.065
gb|CN126554.1|CN126554 RHOH1_17_G12.g1_A002 Acid- and alkal... 42 0.065
gb|CN127064.1|CN127064 RHOH1_20_G07.g1_A002 Acid- and alkal... 42 0.065
gb|CN128543.1|CN128543 RHOH1_30_E05.b1_A002 Acid- and alkal... 42 0.065
gb|CN128631.1|CN128631 RHOH1_30_E05.g1_A002 Acid- and alkal... 42 0.065
gb|CN129635.1|CN129635 RHOH1_36_B10.g1_A002 Acid- and alkal... 42 0.065
gb|CN130423.1|CN130423 RHOH1_41_H09.b1_A002 Acid- and alkal... 42 0.065
gb|CN130539.1|CN130539 RHOH1_42_D10.b1_A002 Acid- and alkal... 42 0.065
gb|CN130616.1|CN130616 RHOH1_42_D10.g1_A002 Acid- and alkal... 42 0.065
gb|CN130867.1|CN130867 RHOH1_44_H01.b1_A002 Acid- and alkal... 42 0.065
gb|CN130937.1|CN130937 RHOH1_44_H01.g1_A002 Acid- and alkal... 42 0.065
gb|CN131296.1|CN131296 RHOH1_47_C07.b1_A002 Acid- and alkal... 42 0.065
gb|CN131371.1|CN131371 RHOH1_47_C07.g1_A002 Acid- and alkal... 42 0.065
gb|CN132448.1|CN132448 OX1_6_F03.b1_A002 Oxidatively-stress... 42 0.065
gb|CW050886.1|CW050886 104_291_10514914_115_30196 Sorghum m... 40 0.26
gb|CW414588.1|CW414588 fsbb001f114f05f0 Sorghum methylation... 40 0.26
>gb|BG488416.1|BG488416 RHIZ2_63_D10.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 556
Score = 682 bits (344), Expect = 0.0
Identities = 433/462 (93%), Gaps = 3/462 (0%)
Strand = Plus / Plus
Query: 74 ggacccgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcagaggagga 133
|||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 76 ggacccgatggcgcccaaggcggagaagaagccggcagcgaagaagcccgtggaggagga 135
Query: 134 gcccgcggccccggcggagaaggcccccgctgggaagaagccgaaggcggagaagcggct 193
| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||
Sbjct: 136 gtccgcggccccggcggagaaggcccccgcggggaagaagcccaaggcggagaagcgtct 195
Query: 194 cccggcgggaaaatccgccggcaaggaaggcggtgttgacaagaaggggcggaagaaggc 253
||||||||| || |||||| ||||||| ||||| | | |||| ||| ||||||||||
Sbjct: 196 cccggcgggcaagtccgccagcaaggagggcggcg---agaagaggggtcggaagaaggg 252
Query: 254 caagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcaccc 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 caagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcaccc 312
Query: 314 ggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatctt 373
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 313 ggacatcggtatctcctccaaggccatgtccatcatgaactccttcatcaatgacatctt 372
Query: 374 cgagaagctcgccggcgaggcggccaagctcgcccgctacaacaagaagcccaccatcac 433
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 373 cgagaagctcgccggcgaggccgccaagctcgcccgctacaacaagaagcccaccatcac 432
Query: 434 ctcccgggagatccagacctccgtccgcctcgttctacccggcgagctcgccaagcacgc 493
|| ||||||||||||||||||||||||||||| || ||||| |||||||||||||||||
Sbjct: 433 ttctcgggagatccagacctccgtccgcctcgtcctccccggggagctcgccaagcacgc 492
Query: 494 cgtctcggagggcaccaaggccgtcaccaagttcacctcgtc 535
|||||| |||||||||||||||||||||||||||||||||||
Sbjct: 493 cgtctctgagggcaccaaggccgtcaccaagttcacctcgtc 534
>gb|BG240440.1|BG240440 OV1_30_A12.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 555
Score = 674 bits (340), Expect = 0.0
Identities = 432/462 (93%), Gaps = 3/462 (0%)
Strand = Plus / Plus
Query: 74 ggacccgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcagaggagga 133
|||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 70 ggacccgatggcgcccaaggcggagaagaagccggcagcgaagaagcccgtggaggagga 129
Query: 134 gcccgcggccccggcggagaaggcccccgctgggaagaagccgaaggcggagaagcggct 193
|||||||||||||||||||| ||||||| ||||||||||| |||||||||||||| ||
Sbjct: 130 atccgcggccccggcggagaagccccccgcggggaagaagcccaaggcggagaagcgtct 189
Query: 194 cccggcgggaaaatccgccggcaaggaaggcggtgttgacaagaaggggcggaagaaggc 253
||||||||| || |||||| ||||||| ||||| | | |||| ||| ||||||||||
Sbjct: 190 cccggcgggcaagtccgccagcaaggagggcggcg---agaagaggggtcggaagaaggg 246
Query: 254 caagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcaccc 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 caagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcaccc 306
Query: 314 ggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatctt 373
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 307 ggacatcggcatctcctccaaggccatgtccatcatgaactcgttcatcaacgacatctt 366
Query: 374 cgagaagctcgccggcgaggcggccaagctcgcccgctacaacaagaagcccaccatcac 433
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 367 cgagaagctcgccggcgaggccgccaagctcgcccgctacaacaagaagcccaccatcac 426
Query: 434 ctcccgggagatccagacctccgtccgcctcgttctacccggcgagctcgccaagcacgc 493
|| ||||||||||||||||||||||||||||| || ||||| |||||||||||||||||
Sbjct: 427 ttctcgggagatccagacctccgtccgcctcgtcctccccggggagctcgccaagcacgc 486
Query: 494 cgtctcggagggcaccaaggccgtcaccaagttcacctcgtc 535
|||||| |||||||||||||||||||||||||||||||||||
Sbjct: 487 cgtctctgagggcaccaaggccgtcaccaagttcacctcgtc 528
>gb|CW128767.1|CW128767 104_510_11114194_148_34755_039 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11114194, DNA
sequence
Length = 652
Score = 640 bits (323), Expect = 0.0
Identities = 428/461 (92%), Gaps = 4/461 (0%)
Strand = Plus / Minus
Query: 75 gacccgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcagaggaggag 134
||||||||||| |||||||||||||||| | ||| ||||||||||||| ||||||||
Sbjct: 652 gacccgatggcgcccaaggcggagaagagccgggcagcgaagaagcccgt-gaggaggaa 594
Query: 135 cccgcggccccggcggagaaggcccccgctgggaagaagccgaaggcggagaagcggctc 194
|||||||||||||||||||| ||||||| ||||||||||| |||||||||||||| |||
Sbjct: 593 tccgcggccccggcggagaagccccccgcggggaagaagcccaaggcggagaagcgtctc 534
Query: 195 ccggcgggaaaatccgccggcaaggaaggcggtgttgacaagaaggggcggaagaaggcc 254
|||||||| || |||||| ||||||| ||||| | | |||| ||| |||||||||| |
Sbjct: 533 ccggcgggcaagtccgccagcaaggagggcggcg---agaagaggggtcggaagaagggc 477
Query: 255 aagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccg 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 aagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccg 417
Query: 315 gacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttc 374
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 416 gacatcggcatctcctccaaggccatgtccatcatgaactcgttcatcaacgacatcttc 357
Query: 375 gagaagctcgccggcgaggcggccaagctcgcccgctacaacaagaagcccaccatcacc 434
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 356 gagaagctcgccggcgaggccgccaagctcgcccgctacaacaagaagcccaccatcact 297
Query: 435 tcccgggagatccagacctccgtccgcctcgttctacccggcgagctcgccaagcacgcc 494
|| ||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||
Sbjct: 296 tctcgggagatccagacctccgtccgcctcgtcctccccggggagctcgccaagcacgcc 237
Query: 495 gtctcggagggcaccaaggccgtcaccaagttcacctcgtc 535
||||| |||||||||||||||||||||||||||||||||||
Sbjct: 236 gtctctgagggcaccaaggccgtcaccaagttcacctcgtc 196
>gb|BG488106.1|BG488106 RHIZ2_63_D10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 514
Score = 609 bits (307), Expect = e-172
Identities = 384/409 (93%), Gaps = 3/409 (0%)
Strand = Plus / Plus
Query: 127 aggaggagcccgcggccccggcggagaaggcccccgctgggaagaagccgaaggcggaga 186
|||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 1 aggaggagtccgcggccccggcggagaaggcccccgcggggaagaagcccaaggcggaga 60
Query: 187 agcggctcccggcgggaaaatccgccggcaaggaaggcggtgttgacaagaaggggcgga 246
|||| ||||||||||| || |||||| ||||||| ||||| | | |||| ||| ||||
Sbjct: 61 agcgtctcccggcgggcaagtccgccagcaaggagggcggcg---agaagaggggtcgga 117
Query: 247 agaaggccaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcagg 306
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 agaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcagg 177
Query: 307 tgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacg 366
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 178 tgcacccggacatcggtatctcctccaaggccatgtccatcatgaactccttcatcaatg 237
Query: 367 acatcttcgagaagctcgccggcgaggcggccaagctcgcccgctacaacaagaagccca 426
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 238 acatcttcgagaagctcgccggcgaggccgccaagctcgcccgctacaacaagaagccca 297
Query: 427 ccatcacctcccgggagatccagacctccgtccgcctcgttctacccggcgagctcgcca 486
||||||| || ||||||||||||||||||||||||||||| || ||||| ||||||||||
Sbjct: 298 ccatcacttctcgggagatccagacctccgtccgcctcgtcctccccggggagctcgcca 357
Query: 487 agcacgccgtctcggagggcaccaaggccgtcaccaagttcacctcgtc 535
||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 358 agcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcgtc 406
>gb|BE917707.1|BE917707 OV1_6_B04.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 554
Score = 597 bits (301), Expect = e-169
Identities = 424/463 (91%), Gaps = 9/463 (1%)
Strand = Plus / Plus
Query: 79 cgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcagaggaggagcccg 138
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 86 cgatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccg 145
Query: 139 cggccccg---gcggagaaggcccccgctgggaagaagccgaaggcggagaagcggctcc 195
||||| | ||||||||| |||| || |||||||||||||||||||||||||| ||||
Sbjct: 146 cggccgagaaggcggagaagaccccggcggggaagaagccgaaggcggagaagcgcctcc 205
Query: 196 cggcgggaaaatcc---gccggcaaggaaggcggtgttgacaagaaggggcggaagaagg 252
| ||||| || ||| ||||||||||| |||| | ||||||||| ||||||||
Sbjct: 206 ccgcgggcaagtccagcgccggcaaggacggcgaggg---caagaagggcaagaagaagg 262
Query: 253 ccaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacc 312
||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 263 ccaagaagagcgtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcacc 322
Query: 313 cggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatct 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatct 382
Query: 373 tcgagaagctcgccggcgaggcggccaagctcgcccgctacaacaagaagcccaccatca 432
||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 383 tcgagaagctcgccgccgagtccgccaagctcgcccgctacaacaagaagcccaccatca 442
Query: 433 cctcccgggagatccagacctccgtccgcctcgttctacccggcgagctcgccaagcacg 492
| ||||| ||||||||||| |||||||||||||| || ||||| ||||||||||||||||
Sbjct: 443 cgtcccgagagatccagacttccgtccgcctcgtcctccccggggagctcgccaagcacg 502
Query: 493 ccgtctcggagggcaccaaggccgtcaccaagttcacctcgtc 535
||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 503 ccgtctccgagggcaccaaggccgtcaccaagttcacctcgtc 545
>gb|CW129063.1|CW129063 104_511_11114353_148_34760_015 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11114353, DNA
sequence
Length = 698
Score = 583 bits (294), Expect = e-165
Identities = 423/466 (90%), Gaps = 15/466 (3%)
Strand = Plus / Plus
Query: 79 cgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcagaggaggagccc- 137
||||||| |||||||| ||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 171 cgatggcgcccaaggcagagaagaagccggcgtcgaagaagcccgcggaggaggagccct 230
Query: 138 --------gcggccccggcggagaaggcccccgctgggaagaagccgaaggcggagaagc 189
||||| |||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 231 cggagaaggcggctccggcggagaaggcccccgcggggaagaagcccaaggcggagaagc 290
Query: 190 ggctcccggcgggaaaatc---cgccggcaaggaaggcggtgttgacaagaaggggcgga 246
||||||||||||| || || |||||||||||| ||||| | | ||||||||| |||
Sbjct: 291 ggctcccggcgggcaagtcgtccgccggcaaggagggcggcg---agaagaaggggagga 347
Query: 247 agaaggccaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcagg 306
|||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 348 agaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtcctgaagcagg 407
Query: 307 tgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacg 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 tgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacg 467
Query: 367 acatcttcgagaagctcgccggcgaggcggccaagctcgcccgctacaacaagaagccca 426
|||||||||||||||| |||| ||| | |||||||||||||||||||||||||||||||
Sbjct: 468 acatcttcgagaagctggccgcggagtccgccaagctcgcccgctacaacaagaagccca 527
Query: 427 ccatcacctcccgggagatccagacctccgtccgcctcgttctacccggcgagctcgcca 486
|||| |||||||| |||||||||||||||||||||||||| || ||||| ||||||||||
Sbjct: 528 ccattacctcccgcgagatccagacctccgtccgcctcgtcctccccggggagctcgcca 587
Query: 487 agcacgccgtctcggagggcaccaaggccgtcaccaagttcacctc 532
||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 588 agcacgccgtctccgagggtaccaaggccgtcaccaagttcacctc 633
>gb|CW188377.1|CW188377 104_608_11172997_148_36734_061 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11172997, DNA
sequence
Length = 707
Score = 583 bits (294), Expect = e-165
Identities = 415/454 (91%), Gaps = 6/454 (1%)
Strand = Plus / Plus
Query: 79 cgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcagaggaggagcccg 138
||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| |
Sbjct: 102 cgatggctcccaaggcggagaagaagccggcggcgaagaagcccgcggcggaggag---g 158
Query: 139 cggccccggcggagaaggcccccgctgggaagaagccgaaggcggagaagcggctcccgg 198
| || |||| ||||||||||| || ||||||||||| |||||||||||||| |||||||
Sbjct: 159 agcccgcggccgagaaggccccggcggggaagaagcccaaggcggagaagcgcctcccgg 218
Query: 199 cgggaaaatccgccggcaaggaaggcggtgttgacaagaaggggcggaagaaggccaaga 258
|||| || || ||||||||||||||||| | ||||||||||| ||||||||||||||
Sbjct: 219 cgggcaagtcggccggcaaggaaggcggcg---acaagaaggggaagaagaaggccaaga 275
Query: 259 agagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggaca 318
|| |||||||| |||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 276 agtcggtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcaccctgaca 335
Query: 319 tcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgaga 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgaga 395
Query: 379 agctcgccggcgaggcggccaagctcgcccgctacaacaagaagcccaccatcacctccc 438
||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 396 agctcgccgccgaggccgccaagctcgcgcgctacaacaagaagcccaccatcacctcca 455
Query: 439 gggagatccagacctccgtccgcctcgttctacccggcgagctcgccaagcacgccgtct 498
||||||||||||| || || |||||||| || ||||||||||||||||||||||||||||
Sbjct: 456 gggagatccagacgtcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgtct 515
Query: 499 cggagggcaccaaggccgtcaccaagttcacctc 532
| ||||||||||||||||||||||||||||||||
Sbjct: 516 ccgagggcaccaaggccgtcaccaagttcacctc 549
>gb|CW319235.1|CW319235 104_811_11474377_148_35884_003 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11474377, DNA
sequence
Length = 704
Score = 579 bits (292), Expect = e-163
Identities = 417/458 (91%), Gaps = 3/458 (0%)
Strand = Plus / Plus
Query: 78 ccgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcagaggaggagccc 137
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 142 ccgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagccc 201
Query: 138 gcggccccg---gcggagaaggcccccgctgggaagaagccgaaggcggagaagcggctc 194
||| || | |||||||||||||| || ||||||||||| ||||| ||||||||||||
Sbjct: 202 gcgaccgagaaggcggagaaggccccggcggggaagaagcccaaggccgagaagcggctc 261
Query: 195 ccggcgggaaaatccgccggcaaggaaggcggtgttgacaagaaggggcggaagaaggcc 254
|| ||||| || |||||||||||||| ||||| | | |||||||||| |||||||||
Sbjct: 262 cccgcgggcaagtccgccggcaaggagggcggcgagggcaagaaggggaagaagaaggcg 321
Query: 255 aagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccg 314
|||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 322 aagaagtccgtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcacccg 381
Query: 315 gacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttc 374
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gacatcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttc 441
Query: 375 gagaagctcgccggcgaggcggccaagctcgcccgctacaacaagaagcccaccatcacc 434
|||||||| || | |||| | |||||||| || |||||||||||||||||||||||||||
Sbjct: 442 gagaagcttgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacc 501
Query: 435 tcccgggagatccagacctccgtccgcctcgttctacccggcgagctcgccaagcacgcc 494
||||| |||||||||||||| || |||||||| || ||||||||||||||||||||||||
Sbjct: 502 tcccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgcc 561
Query: 495 gtctcggagggcaccaaggccgtcaccaagttcacctc 532
||||| |||||||||||||| |||||||||||||||||
Sbjct: 562 gtctccgagggcaccaaggctgtcaccaagttcacctc 599
>gb|CW417908.1|CW417908 fsbb001f121c05f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f121c05, DNA
sequence
Length = 812
Score = 579 bits (292), Expect = e-163
Identities = 417/458 (91%), Gaps = 3/458 (0%)
Strand = Plus / Plus
Query: 78 ccgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcagaggaggagccc 137
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 92 ccgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagccc 151
Query: 138 gcggccccg---gcggagaaggcccccgctgggaagaagccgaaggcggagaagcggctc 194
||| || | |||||||||||||| || ||||||||||| ||||| ||||||||||||
Sbjct: 152 gcgaccgagaaggcggagaaggccccggcggggaagaagcccaaggccgagaagcggctc 211
Query: 195 ccggcgggaaaatccgccggcaaggaaggcggtgttgacaagaaggggcggaagaaggcc 254
|| ||||| || |||||||||||||| ||||| | | |||||||||| |||||||||
Sbjct: 212 cccgcgggcaagtccgccggcaaggagggcggcgagggcaagaaggggaagaagaaggcg 271
Query: 255 aagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccg 314
|||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 272 aagaagtccgtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcacccg 331
Query: 315 gacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttc 374
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gacatcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttc 391
Query: 375 gagaagctcgccggcgaggcggccaagctcgcccgctacaacaagaagcccaccatcacc 434
|||||||| || | |||| | |||||||| || |||||||||||||||||||||||||||
Sbjct: 392 gagaagcttgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacc 451
Query: 435 tcccgggagatccagacctccgtccgcctcgttctacccggcgagctcgccaagcacgcc 494
||||| |||||||||||||| || |||||||| || ||||||||||||||||||||||||
Sbjct: 452 tcccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgcc 511
Query: 495 gtctcggagggcaccaaggccgtcaccaagttcacctc 532
||||| |||||||||||||| |||||||||||||||||
Sbjct: 512 gtctccgagggcaccaaggctgtcaccaagttcacctc 549
>gb|BE355360.1|BE355360 DG1_114_A03.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 526
Score = 579 bits (292), Expect = e-163
Identities = 417/458 (91%), Gaps = 3/458 (0%)
Strand = Plus / Plus
Query: 78 ccgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcagaggaggagccc 137
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 62 ccgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagccc 121
Query: 138 gcggccccg---gcggagaaggcccccgctgggaagaagccgaaggcggagaagcggctc 194
||| || | |||||||||||||| || ||||||||||| ||||| ||||||||||||
Sbjct: 122 gcgaccgagaaggcggagaaggccccggcggggaagaagcccaaggccgagaagcggctc 181
Query: 195 ccggcgggaaaatccgccggcaaggaaggcggtgttgacaagaaggggcggaagaaggcc 254
|| ||||| || |||||||||||||| ||||| | | |||||||||| |||||||||
Sbjct: 182 cccgcgggcaagtccgccggcaaggagggcggcgagggcaagaaggggaagaagaaggcg 241
Query: 255 aagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccg 314
|||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 242 aagaagtccgtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcacccg 301
Query: 315 gacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttc 374
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gacatcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttc 361
Query: 375 gagaagctcgccggcgaggcggccaagctcgcccgctacaacaagaagcccaccatcacc 434
|||||||| || | |||| | |||||||| || |||||||||||||||||||||||||||
Sbjct: 362 gagaagcttgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacc 421
Query: 435 tcccgggagatccagacctccgtccgcctcgttctacccggcgagctcgccaagcacgcc 494
||||| |||||||||||||| || |||||||| || ||||||||||||||||||||||||
Sbjct: 422 tcccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgcc 481
Query: 495 gtctcggagggcaccaaggccgtcaccaagttcacctc 532
||||| |||||||||||||| |||||||||||||||||
Sbjct: 482 gtctccgagggcaccaaggctgtcaccaagttcacctc 519
>gb|CD213713.1|CD213713 HS1_52_G12.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_52_G12_A012 5', mRNA sequence
Length = 729
Score = 575 bits (290), Expect = e-162
Identities = 420/463 (90%), Gaps = 9/463 (1%)
Strand = Plus / Plus
Query: 79 cgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcagaggaggagcccg 138
||||||| |||||||| ||||||||||| ||||||||||||| || |||||||||||||
Sbjct: 81 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagctggcggaggaggagcccg 140
Query: 139 cggccccggcggagaaggcccccgctgggaagaagccgaaggcggagaagcggctcccgg 198
|||| ||||||| | || || ||||||||||| |||||||||||||| ||||| |
Sbjct: 141 cggc------ggagaagacgccggccgggaagaagcccaaggcggagaagcgtctccccg 194
Query: 199 cgggaaaatccgccggcaaggaaggcggtgttga---caagaaggggcggaagaaggcca 255
| || || |||||||||||||| ||||| | || |||| ||| |||||||||| ||
Sbjct: 195 ctggcaagtccgccggcaaggagggcggcggcgagggcaagcggggccggaagaagggca 254
Query: 256 agaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccgg 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 agaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccgg 314
Query: 316 acatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcg 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 acatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcg 374
Query: 376 agaagctcgccggcgaggcggccaagctcgcccgctacaacaagaagcccaccatcacct 435
|||||||||||| |||||| ||||||||||| || |||||||||||||||||||||||||
Sbjct: 375 agaagctcgccgccgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacct 434
Query: 436 cccgggagatccagacctccgtccgcctcgttctacccggcgagctcgccaagcacgccg 495
|||| |||||||||||||||||||||||||| || ||||| | |||||||||||||||||
Sbjct: 435 cccgcgagatccagacctccgtccgcctcgtcctccccggggggctcgccaagcacgccg 494
Query: 496 tctcggagggcaccaaggccgtcaccaagttcacctcgtccta 538
|||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 495 tctctgagggcaccaaggccgtcaccaagttcacctcgtccta 537
>gb|CW191309.1|CW191309 104_613_11178426_116_36942_075 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11178426, DNA
sequence
Length = 724
Score = 573 bits (289), Expect = e-162
Identities = 413/454 (90%), Gaps = 9/454 (1%)
Strand = Plus / Plus
Query: 79 cgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcagaggaggagcccg 138
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 161 cgatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccg 220
Query: 139 cggccccggcggagaaggcccccgctgggaagaagccgaaggcggagaagcggctcccgg 198
||||| ||||||||||| || ||||||||||| |||||||||||||| ||||| |
Sbjct: 221 cggcc------gagaaggccccggcggggaagaagcccaaggcggagaagcgcctccccg 274
Query: 199 cgggaaaatccgccggcaaggaaggcggtgttgacaagaaggggcggaagaaggccaaga 258
|||| || || ||||||||||| ||||| | |||||||||| ||||||||||||||
Sbjct: 275 cgggcaagtctgccggcaaggagggcggcg---acaagaagggcaagaagaaggccaaga 331
Query: 259 agagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggaca 318
|| |||||||| |||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 332 agtcggtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcaccccgaca 391
Query: 319 tcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgaga 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgaga 451
Query: 379 agctcgccggcgaggcggccaagctcgcccgctacaacaagaagcccaccatcacctccc 438
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 agctcgccggcgaggccgccaagctcgcccgctacaacaagaagcccaccatcacctcca 511
Query: 439 gggagatccagacctccgtccgcctcgttctacccggcgagctcgccaagcacgccgtct 498
||||||||||||| || || |||||||| || || ||||||||||||||||||||||| |
Sbjct: 512 gggagatccagacgtcggtgcgcctcgtcctcccaggcgagctcgccaagcacgccgtgt 571
Query: 499 cggagggcaccaaggccgtcaccaagttcacctc 532
| ||||||||||||||||| ||||||||||||||
Sbjct: 572 ccgagggcaccaaggccgttaccaagttcacctc 605
>gb|BE917630.1|BE917630 OV1_6_B04.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 493
Score = 569 bits (287), Expect = e-160
Identities = 424/465 (91%), Gaps = 11/465 (2%)
Strand = Plus / Plus
Query: 79 cgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcagaggaggagcccg 138
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 10 cgatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccg 69
Query: 139 cggccccg---gcggagaaggcccccgctgggaagaagccgaaggcggagaagcggctcc 195
||||| | ||||||||| |||| || |||||||||||||||||||||||||| ||||
Sbjct: 70 cggccgagaaggcggagaagaccccggcggggaagaagccgaaggcggagaagcgcctcc 129
Query: 196 cggcgggaaaatcc---gccggcaaggaaggcggtgttgacaagaaggggcggaagaagg 252
| ||||| || ||| ||||||||||| |||| | ||||||||| ||||||||
Sbjct: 130 ccgcgggcaagtccagcgccggcaaggacggcgaggg---caagaagggcaagaagaagg 186
Query: 253 ccaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacc 312
||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 187 ccaagaagagcgtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcacc 246
Query: 313 cggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatct 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 cggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatct 306
Query: 373 tcgagaagctcgccggcgaggcggccaagctcgcccgctacaacaagaagcccaccatca 432
||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 307 tcgagaagctcgccgccgagtccgccaagctcgcccgctacaacaagaagcccaccatca 366
Query: 433 cctcccgggagatccagacctccgtccgcctcgttctacccggcgagctcgccaagcacg 492
| ||||| ||||||||||| |||||||||||||| || ||||| ||||||||||||||||
Sbjct: 367 cgtcccgagagatccagacttccgtccgcctcgtcctccccggggagctcgccaagcacg 426
Query: 493 ccgtctc-ggagggc-accaaggccgtcaccaagttcacctcgtc 535
||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 427 ccgtctcacgagggcaaccaaggccgtcaccaagttcacctcgtc 471
>gb|BZ341857.1|BZ341857 ic79b05.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ic79b05 5', DNA sequence
Length = 685
Score = 559 bits (282), Expect = e-157
Identities = 418/463 (90%), Gaps = 9/463 (1%)
Strand = Plus / Minus
Query: 79 cgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcagaggaggagcccg 138
||||||| |||||||| |||||||| || ||||||||||||| || |||||||||||||
Sbjct: 538 cgatggcgcccaaggccgagaagaaacccgcggcgaagaagctggcggaggaggagcccg 479
Query: 139 cggccccggcggagaaggcccccgctgggaagaagccgaaggcggagaagcggctcccgg 198
||||| |||||||| || || ||||||||||| || ||||||||||| || || |
Sbjct: 478 cggcc------gagaaggcgccggccgggaagaagcccaaagcggagaagcgtctgcccg 425
Query: 199 cgggaaaatccgccggcaaggaaggcggtgttga---caagaaggggcggaagaaggcca 255
| || || |||||||||||||| ||||| | || |||| ||| |||||||||| ||
Sbjct: 424 ctggcaagtccgccggcaaggagggcggcggcgagggcaagcggggccggaagaagggca 365
Query: 256 agaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccgg 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 agaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccgg 305
Query: 316 acatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcg 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 acatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcg 245
Query: 376 agaagctcgccggcgaggcggccaagctcgcccgctacaacaagaagcccaccatcacct 435
|||||||||||| |||||| ||||||||||| || |||||||||||||||||||||||||
Sbjct: 244 agaagctcgccgccgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacct 185
Query: 436 cccgggagatccagacctccgtccgcctcgttctacccggcgagctcgccaagcacgccg 495
|||| |||||||||||||||||||||||||| || ||||| |||||||| ||||||||||
Sbjct: 184 cccgcgagatccagacctccgtccgcctcgtcctccccggggagctcgcgaagcacgccg 125
Query: 496 tctcggagggcaccaaggccgtcaccaagttcacctcgtccta 538
|||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 124 tctctgagggcaccaaggccgtcaccaagttcacctcgtccta 82
>gb|CW155043.1|CW155043 104_557_11145924_116_36362_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11145924, DNA
sequence
Length = 743
Score = 559 bits (282), Expect = e-157
Identities = 418/463 (90%), Gaps = 9/463 (1%)
Strand = Plus / Plus
Query: 79 cgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcagaggaggagcccg 138
||||||| |||||||| |||||||| || ||||||||||||| || |||||||||||||
Sbjct: 95 cgatggcgcccaaggccgagaagaaacccgcggcgaagaagctggcggaggaggagcccg 154
Query: 139 cggccccggcggagaaggcccccgctgggaagaagccgaaggcggagaagcggctcccgg 198
||||| |||||||| || || ||||||||||| || ||||||||||| || || |
Sbjct: 155 cggcc------gagaaggcgccggccgggaagaagcccaaagcggagaagcgtctgcccg 208
Query: 199 cgggaaaatccgccggcaaggaaggcggtgttga---caagaaggggcggaagaaggcca 255
| || || |||||||||||||| ||||| | || |||| ||| |||||||||| ||
Sbjct: 209 ctggcaagtccgccggcaaggagggcggcggcgagggcaagcggggccggaagaagggca 268
Query: 256 agaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccgg 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 agaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccgg 328
Query: 316 acatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcg 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 acatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcg 388
Query: 376 agaagctcgccggcgaggcggccaagctcgcccgctacaacaagaagcccaccatcacct 435
|||||||||||| |||||| ||||||||||| || |||||||||||||||||||||||||
Sbjct: 389 agaagctcgccgccgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacct 448
Query: 436 cccgggagatccagacctccgtccgcctcgttctacccggcgagctcgccaagcacgccg 495
|||| |||||||||||||||||||||||||| || ||||| |||||||| ||||||||||
Sbjct: 449 cccgcgagatccagacctccgtccgcctcgtcctccccggggagctcgcgaagcacgccg 508
Query: 496 tctcggagggcaccaaggccgtcaccaagttcacctcgtccta 538
|||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 509 tctctgagggcaccaaggccgtcaccaagttcacctcgtccta 551
>gb|CX606979.1|CX606979 ANR1_6_B05.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_B05_A002 3', mRNA sequence
Length = 665
Score = 559 bits (282), Expect = e-157
Identities = 418/463 (90%), Gaps = 9/463 (1%)
Strand = Plus / Plus
Query: 79 cgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcagaggaggagcccg 138
||||||| |||||||| |||||||| || ||||||||||||| || |||||||||||||
Sbjct: 52 cgatggcgcccaaggccgagaagaaacccgcggcgaagaagctggcggaggaggagcccg 111
Query: 139 cggccccggcggagaaggcccccgctgggaagaagccgaaggcggagaagcggctcccgg 198
||||| |||||||| || || ||||||||||| || ||||||||||| || || |
Sbjct: 112 cggcc------gagaaggcgccggccgggaagaagcccaaagcggagaagcgtctgcccg 165
Query: 199 cgggaaaatccgccggcaaggaaggcggtgttga---caagaaggggcggaagaaggcca 255
| || || |||||||||||||| ||||| | || |||| ||| |||||||||| ||
Sbjct: 166 ctggcaagtccgccggcaaggagggcggcggcgagggcaagcggggccggaagaagggca 225
Query: 256 agaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccgg 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 agaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccgg 285
Query: 316 acatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcg 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 acatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcg 345
Query: 376 agaagctcgccggcgaggcggccaagctcgcccgctacaacaagaagcccaccatcacct 435
|||||||||||| |||||| ||||||||||| || |||||||||||||||||||||||||
Sbjct: 346 agaagctcgccgccgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacct 405
Query: 436 cccgggagatccagacctccgtccgcctcgttctacccggcgagctcgccaagcacgccg 495
|||| |||||||||||||||||||||||||| || ||||| |||||||| ||||||||||
Sbjct: 406 cccgcgagatccagacctccgtccgcctcgtcctccccggggagctcgcgaagcacgccg 465
Query: 496 tctcggagggcaccaaggccgtcaccaagttcacctcgtccta 538
|||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tctctgagggcaccaaggccgtcaccaagttcacctcgtccta 508
>gb|CX607063.1|CX607063 ANR1_6_B05.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_B05_A002 5', mRNA sequence
Length = 702
Score = 559 bits (282), Expect = e-157
Identities = 418/463 (90%), Gaps = 9/463 (1%)
Strand = Plus / Plus
Query: 79 cgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcagaggaggagcccg 138
||||||| |||||||| |||||||| || ||||||||||||| || |||||||||||||
Sbjct: 71 cgatggcgcccaaggccgagaagaaacccgcggcgaagaagctggcggaggaggagcccg 130
Query: 139 cggccccggcggagaaggcccccgctgggaagaagccgaaggcggagaagcggctcccgg 198
||||| |||||||| || || ||||||||||| || ||||||||||| || || |
Sbjct: 131 cggcc------gagaaggcgccggccgggaagaagcccaaagcggagaagcgtctgcccg 184
Query: 199 cgggaaaatccgccggcaaggaaggcggtgttga---caagaaggggcggaagaaggcca 255
| || || |||||||||||||| ||||| | || |||| ||| |||||||||| ||
Sbjct: 185 ctggcaagtccgccggcaaggagggcggcggcgagggcaagcggggccggaagaagggca 244
Query: 256 agaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccgg 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 agaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccgg 304
Query: 316 acatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcg 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 acatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcg 364
Query: 376 agaagctcgccggcgaggcggccaagctcgcccgctacaacaagaagcccaccatcacct 435
|||||||||||| |||||| ||||||||||| || |||||||||||||||||||||||||
Sbjct: 365 agaagctcgccgccgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacct 424
Query: 436 cccgggagatccagacctccgtccgcctcgttctacccggcgagctcgccaagcacgccg 495
|||| |||||||||||||||||||||||||| || ||||| |||||||| ||||||||||
Sbjct: 425 cccgcgagatccagacctccgtccgcctcgtcctccccggggagctcgcgaagcacgccg 484
Query: 496 tctcggagggcaccaaggccgtcaccaagttcacctcgtccta 538
|||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tctctgagggcaccaaggccgtcaccaagttcacctcgtccta 527
>gb|CX610420.1|CX610420 ANR1_18_D02.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_18_D02_A002 5', mRNA sequence
Length = 711
Score = 559 bits (282), Expect = e-157
Identities = 418/463 (90%), Gaps = 9/463 (1%)
Strand = Plus / Plus
Query: 79 cgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcagaggaggagcccg 138
||||||| |||||||| |||||||| || ||||||||||||| || |||||||||||||
Sbjct: 70 cgatggcgcccaaggccgagaagaaacccgcggcgaagaagctggcggaggaggagcccg 129
Query: 139 cggccccggcggagaaggcccccgctgggaagaagccgaaggcggagaagcggctcccgg 198
||||| |||||||| || || ||||||||||| || ||||||||||| || || |
Sbjct: 130 cggcc------gagaaggcgccggccgggaagaagcccaaagcggagaagcgtctgcccg 183
Query: 199 cgggaaaatccgccggcaaggaaggcggtgttga---caagaaggggcggaagaaggcca 255
| || || |||||||||||||| ||||| | || |||| ||| |||||||||| ||
Sbjct: 184 ctggcaagtccgccggcaaggagggcggcggcgagggcaagcggggccggaagaagggca 243
Query: 256 agaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccgg 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 agaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccgg 303
Query: 316 acatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcg 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 acatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcg 363
Query: 376 agaagctcgccggcgaggcggccaagctcgcccgctacaacaagaagcccaccatcacct 435
|||||||||||| |||||| ||||||||||| || |||||||||||||||||||||||||
Sbjct: 364 agaagctcgccgccgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacct 423
Query: 436 cccgggagatccagacctccgtccgcctcgttctacccggcgagctcgccaagcacgccg 495
|||| |||||||||||||||||||||||||| || ||||| |||||||| ||||||||||
Sbjct: 424 cccgcgagatccagacctccgtccgcctcgtcctccccggggagctcgcgaagcacgccg 483
Query: 496 tctcggagggcaccaaggccgtcaccaagttcacctcgtccta 538
|||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 484 tctctgagggcaccaaggccgtcaccaagttcacctcgtccta 526
>gb|CW410848.1|CW410848 fsbb001f105m09k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f105m09, DNA
sequence
Length = 598
Score = 551 bits (278), Expect = e-155
Identities = 417/463 (90%), Gaps = 9/463 (1%)
Strand = Plus / Plus
Query: 79 cgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcagaggaggagcccg 138
||||||| |||||||| |||||||| || ||||||||||||| || |||||||||||||
Sbjct: 70 cgatggcgcccaaggccgagaagaaacccgcggcgaagaagctggcggaggaggagcccg 129
Query: 139 cggccccggcggagaaggcccccgctgggaagaagccgaaggcggagaagcggctcccgg 198
||||| |||||||| || || ||||||||||| || ||||||||||| || || |
Sbjct: 130 cggcc------gagaaggcgccggccgggaagaagcccaaagcggagaagcgtctgcccg 183
Query: 199 cgggaaaatccgccggcaaggaaggcggtgttga---caagaaggggcggaagaaggcca 255
| || || |||||||||||||| ||||| | || |||| ||| |||||||||| ||
Sbjct: 184 ctggcaagtccgccggcaaggagggcggcggcgagggcaagcggggccggaagaagggca 243
Query: 256 agaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccgg 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 agaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccgg 303
Query: 316 acatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcg 375
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 304 acatcggcatctcctccaagggcatgtccatcatgaactccttcatcaacgacatcttcg 363
Query: 376 agaagctcgccggcgaggcggccaagctcgcccgctacaacaagaagcccaccatcacct 435
|||||||||||| |||||| ||||||||||| || |||||||||||||||||||||||||
Sbjct: 364 agaagctcgccgccgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacct 423
Query: 436 cccgggagatccagacctccgtccgcctcgttctacccggcgagctcgccaagcacgccg 495
|||| |||||||||||||||||||||||||| || ||||| |||||||| ||||||||||
Sbjct: 424 cccgcgagatccagacctccgtccgcctcgtcctccccggggagctcgcgaagcacgccg 483
Query: 496 tctcggagggcaccaaggccgtcaccaagttcacctcgtccta 538
|||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 484 tctctgagggcaccaaggccgtcaccaagttcacctcgtccta 526
>gb|BF480763.1|BF480763 FM1_14_F11.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 592
Score = 549 bits (277), Expect = e-154
Identities = 395/434 (91%), Gaps = 9/434 (2%)
Strand = Plus / Plus
Query: 108 gcggcgaagaagcccgcagaggaggagcccgcggccccggcggagaaggcccccgctggg 167
||||||||||||| || |||||||||||||||||| |||||||| || || |||
Sbjct: 4 gcggcgaagaagctggcggaggaggagcccgcggcc------gagaaggcgccggccggg 57
Query: 168 aagaagccgaaggcggagaagcggctcccggcgggaaaatccgccggcaaggaaggcggt 227
|||||||| |||||||||||||| ||||| || || || |||||||||||||| |||||
Sbjct: 58 aagaagcccaaggcggagaagcgtctccccgctggcaagtccgccggcaaggagggcggc 117
Query: 228 gttga---caagaaggggcggaagaaggccaagaagagcgtggagacgtacaagatctac 284
| || |||| ||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 118 ggcgagggcaagcggggccggaagaagggcaagaagagcgtggagacgtacaagatctac 177
Query: 285 atcttcaaggtgctgaagcaggtgcacccggacatcggcatctcctccaaggccatgtcc 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 atcttcaaggtgctgaagcaggtgcacccggacatcggcatctcctccaaggccatgtcc 237
Query: 345 atcatgaactccttcatcaacgacatcttcgagaagctcgccggcgaggcggccaagctc 404
||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 238 atcatgaactccttcatcaacgacatcttcgagaagctcgccgccgaggccgccaagctc 297
Query: 405 gcccgctacaacaagaagcccaccatcacctcccgggagatccagacctccgtccgcctc 464
|| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 298 gcgcggtacaacaagaagcccaccatcacctcccgcgagatccagacctccgtccgcctc 357
Query: 465 gttctacccggcgagctcgccaagcacgccgtctcggagggcaccaaggccgtcaccaag 524
|| || ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 358 gtcctccccggggagctcgcgaagcacgccgtctctgagggcaccaaggccgtcaccaag 417
Query: 525 ttcacctcgtccta 538
||||||||||||||
Sbjct: 418 ttcacctcgtccta 431
>gb|CW183462.1|CW183462 104_599_11164629_148_36672_089 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11164629, DNA
sequence
Length = 693
Score = 545 bits (275), Expect = e-153
Identities = 408/452 (90%), Gaps = 9/452 (1%)
Strand = Plus / Plus
Query: 81 atggcacccaaggcggagaagaagccggcggcgaagaagcccgcagaggaggagcccgcg 140
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 59 atggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgcg 118
Query: 141 gccccggcggagaaggcccccgctgggaagaagccgaaggcggagaagcggctcccggcg 200
||| |||||||| || || ||||||||||| |||||||||||||| |||||||||
Sbjct: 119 gcc------gagaaggcgccggcggggaagaagcccaaggcggagaagcgcctcccggcg 172
Query: 201 ggaaaatccgccggcaaggaaggcggtgttgacaagaaggggcggaagaaggccaagaag 260
|| || || ||||||||||| || || ||||||||||| ||||||||| ||||||
Sbjct: 173 ggcaagtcggccggcaaggagggggg---cgacaagaagggcaagaagaaggctaagaag 229
Query: 261 agcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatc 320
|||||||| ||||||||||||||||||||||||||||||||||| ||||| |||| |
Sbjct: 230 tcggtggagacctacaagatctacatcttcaaggtgctgaagcaggtccaccccgacacc 289
Query: 321 ggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaag 380
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 290 ggcatctcctccaaggccatgtccatcatgaattccttcatcaacgatatcttcgagaag 349
Query: 381 ctcgccggcgaggcggccaagctcgcccgctacaacaagaagcccaccatcacctcccgg 440
||||||||||| || ||||||||||| ||||||||||| |||||||||||||||||| ||
Sbjct: 350 ctcgccggcgaagccgccaagctcgcgcgctacaacaaaaagcccaccatcacctccagg 409
Query: 441 gagatccagacctccgtccgcctcgttctacccggcgagctcgccaagcacgccgtctcg 500
|||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 410 gagatccagacctccgtccgcctcgtcctccccggcgagctcgccaagcacgccgtctcc 469
Query: 501 gagggcaccaaggccgtcaccaagttcacctc 532
||||||||||||||||| ||||||||||||||
Sbjct: 470 gagggcaccaaggccgttaccaagttcacctc 501
>gb|CD462726.1|CD462726 ETH1_39_B03.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_39_B03_A002 5', mRNA sequence
Length = 637
Score = 545 bits (275), Expect = e-153
Identities = 418/464 (90%), Gaps = 10/464 (2%)
Strand = Plus / Plus
Query: 79 cgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcagaggaggagcccg 138
||||||| |||||||| |||||||| || ||||||||||||| || |||||||||||||
Sbjct: 92 cgatggcgcccaaggccgagaagaaacccgcggcgaagaagctggcggaggaggagcccg 151
Query: 139 cggccccggcggagaaggcccccgctgggaagaagccgaaggcggagaagcggctcccgg 198
||||| |||||||| || || ||||||||||| || ||||||||||| || || |
Sbjct: 152 cggcc------gagaaggcgccggccgggaagaagcccaaagcggagaagcgtctgcccg 205
Query: 199 cgggaaaatccgccggcaaggaaggcggtgttga---caagaaggggcggaagaaggcca 255
| || || |||||||||||||| ||||| | || |||| ||| |||||||||| ||
Sbjct: 206 ctggcaagtccgccggcaaggagggcggcggcgagggcaagcggggccggaagaagggca 265
Query: 256 agaaga-gcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccg 314
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 agaagaagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccg 325
Query: 315 gacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttc 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttc 385
Query: 375 gagaagctcgccggcgaggcggccaagctcgcccgctacaacaagaagcccaccatcacc 434
||||||||||||| |||||| ||||||||||| || ||||||||||||||||||||||||
Sbjct: 386 gagaagctcgccgccgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacc 445
Query: 435 tcccgggagatccagacctccgtccgcctcgttctacccggcgagctcgccaagcacgcc 494
||||| |||||||||||||||||||||||||| || ||||| |||||||| |||||||||
Sbjct: 446 tcccgcgagatccagacctccgtccgcctcgtcctccccggggagctcgcgaagcacgcc 505
Query: 495 gtctcggagggcaccaaggccgtcaccaagttcacctcgtccta 538
||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gtctctgagggcaccaaggccgtcaccaagttcacctcgtccta 549
>gb|CD464058.1|CD464058 ETH1_48_H05.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_48_H05_A002 3', mRNA sequence
Length = 746
Score = 545 bits (275), Expect = e-153
Identities = 408/452 (90%), Gaps = 9/452 (1%)
Strand = Plus / Plus
Query: 81 atggcacccaaggcggagaagaagccggcggcgaagaagcccgcagaggaggagcccgcg 140
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 19 atggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgcg 78
Query: 141 gccccggcggagaaggcccccgctgggaagaagccgaaggcggagaagcggctcccggcg 200
||| |||||||| || || ||||||||||| |||||||||||||| |||||||||
Sbjct: 79 gcc------gagaaggcgccggcggggaagaagcccaaggcggagaagcgcctcccggcg 132
Query: 201 ggaaaatccgccggcaaggaaggcggtgttgacaagaaggggcggaagaaggccaagaag 260
|| || || ||||||||||| || || ||||||||||| ||||||||| ||||||
Sbjct: 133 ggcaagtcggccggcaaggagggggg---cgacaagaagggcaagaagaaggctaagaag 189
Query: 261 agcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatc 320
|||||||| ||||||||||||||||||||||||||||||||||| ||||| |||| |
Sbjct: 190 tcggtggagacctacaagatctacatcttcaaggtgctgaagcaggtccaccccgacacc 249
Query: 321 ggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaag 380
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 250 ggcatctcctccaaggccatgtccatcatgaattccttcatcaacgatatcttcgagaag 309
Query: 381 ctcgccggcgaggcggccaagctcgcccgctacaacaagaagcccaccatcacctcccgg 440
||||||||||| || ||||||||||| ||||||||||| |||||||||||||||||| ||
Sbjct: 310 ctcgccggcgaagccgccaagctcgcgcgctacaacaaaaagcccaccatcacctccagg 369
Query: 441 gagatccagacctccgtccgcctcgttctacccggcgagctcgccaagcacgccgtctcg 500
|||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 370 gagatccagacctccgtccgcctcgtcctccccggcgagctcgccaagcacgccgtctcc 429
Query: 501 gagggcaccaaggccgtcaccaagttcacctc 532
||||||||||||||||| ||||||||||||||
Sbjct: 430 gagggcaccaaggccgttaccaagttcacctc 461
>gb|AW745446.1|AW745446 WS1_34_A02.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 500
Score = 529 bits (267), Expect = e-148
Identities = 386/425 (90%), Gaps = 3/425 (0%)
Strand = Plus / Plus
Query: 78 ccgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcagaggaggagccc 137
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 72 ccgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagccc 131
Query: 138 gcggccccg---gcggagaaggcccccgctgggaagaagccgaaggcggagaagcggctc 194
||| || | |||||||||||||| || ||||||||||| ||||| ||||||||||||
Sbjct: 132 gcgaccgagaaggcggagaaggccccggcggggaagaagcccaaggccgagaagcggctc 191
Query: 195 ccggcgggaaaatccgccggcaaggaaggcggtgttgacaagaaggggcggaagaaggcc 254
|| ||||| || |||||||||||||| ||||| | | |||||||||| |||||||||
Sbjct: 192 cccgcgggcaagtccgccggcaaggagggcggcgagggcaagaaggggaagaagaaggcg 251
Query: 255 aagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccg 314
|||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 252 aagaagtccgtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcacccg 311
Query: 315 gacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttc 374
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gacatcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttc 371
Query: 375 gagaagctcgccggcgaggcggccaagctcgcccgctacaacaagaagcccaccatcacc 434
|||||||| || | |||| | |||||||| || |||||||||||||||||||||||||||
Sbjct: 372 gagaagcttgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacc 431
Query: 435 tcccgggagatccagacctccgtccgcctcgttctacccggcgagctcgccaagcacgcc 494
||||| |||||||||||||| || |||||||| || ||||||||||||||||||||||||
Sbjct: 432 tcccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgcc 491
Query: 495 gtctc 499
|||||
Sbjct: 492 gtctc 496
>gb|BG411209.1|BG411209 EM1_27_A01.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 498
Score = 529 bits (267), Expect = e-148
Identities = 386/425 (90%), Gaps = 3/425 (0%)
Strand = Plus / Plus
Query: 78 ccgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcagaggaggagccc 137
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 70 ccgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagccc 129
Query: 138 gcggccccg---gcggagaaggcccccgctgggaagaagccgaaggcggagaagcggctc 194
||| || | |||||||||||||| || ||||||||||| ||||| ||||||||||||
Sbjct: 130 gcgaccgagaaggcggagaaggccccggcggggaagaagcccaaggccgagaagcggctc 189
Query: 195 ccggcgggaaaatccgccggcaaggaaggcggtgttgacaagaaggggcggaagaaggcc 254
|| ||||| || |||||||||||||| ||||| | | |||||||||| |||||||||
Sbjct: 190 cccgcgggcaagtccgccggcaaggagggcggcgagggcaagaaggggaagaagaaggcg 249
Query: 255 aagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccg 314
|||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 250 aagaagtccgtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcacccg 309
Query: 315 gacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttc 374
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gacatcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttc 369
Query: 375 gagaagctcgccggcgaggcggccaagctcgcccgctacaacaagaagcccaccatcacc 434
|||||||| || | |||| | |||||||| || |||||||||||||||||||||||||||
Sbjct: 370 gagaagcttgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacc 429
Query: 435 tcccgggagatccagacctccgtccgcctcgttctacccggcgagctcgccaagcacgcc 494
||||| |||||||||||||| || |||||||| || ||||||||||||||||||||||||
Sbjct: 430 tcccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgcc 489
Query: 495 gtctc 499
|||||
Sbjct: 490 gtctc 494
>gb|CD213618.1|CD213618 HS1_52_G12.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_52_G12_A012 3', mRNA sequence
Length = 611
Score = 529 bits (267), Expect = e-148
Identities = 350/377 (92%), Gaps = 3/377 (0%)
Strand = Plus / Plus
Query: 165 gggaagaagccgaaggcggagaagcggctcccggcgggaaaatccgccggcaaggaaggc 224
||||||||||| |||||||||||||| ||||| || || || |||||||||||||| |||
Sbjct: 2 gggaagaagcccaaggcggagaagcgtctccccgctggcaagtccgccggcaaggagggc 61
Query: 225 ggtgttga---caagaaggggcggaagaaggccaagaagagcgtggagacgtacaagatc 281
|| | || |||| ||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 62 ggcggcgagggcaagcggggccggaagaagggcaagaagagcgtggagacgtacaagatc 121
Query: 282 tacatcttcaaggtgctgaagcaggtgcacccggacatcggcatctcctccaaggccatg 341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tacatcttcaaggtgctgaagcaggtgcacccggacatcggcatctcctccaaggccatg 181
Query: 342 tccatcatgaactccttcatcaacgacatcttcgagaagctcgccggcgaggcggccaag 401
|||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 182 tccatcatgaactccttcatcaacgacatcttcgagaagctcgccgccgaggccgccaag 241
Query: 402 ctcgcccgctacaacaagaagcccaccatcacctcccgggagatccagacctccgtccgc 461
||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 242 ctcgcgcggtacaacaagaagcccaccatcacctcccgcgagatccagacctccgtccgc 301
Query: 462 ctcgttctacccggcgagctcgccaagcacgccgtctcggagggcaccaaggccgtcacc 521
||||| || ||||| | ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 302 ctcgtcctccccggggggctcgccaagcacgccgtctctgagggcaccaaggccgtcacc 361
Query: 522 aagttcacctcgtccta 538
|||||||||||||||||
Sbjct: 362 aagttcacctcgtccta 378
>gb|CL152064.1|CL152064 104_335_10779694_116_31364_094 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10779694, DNA
sequence
Length = 690
Score = 523 bits (264), Expect = e-147
Identities = 388/429 (90%), Gaps = 9/429 (2%)
Strand = Plus / Minus
Query: 113 gaagaagcccgcagaggaggagcccgcggccccggcggagaaggcccccgctgggaagaa 172
|||||||| || |||||||||||||||||| |||||||| || || ||||||||
Sbjct: 690 gaagaagctggcggaggaggagcccgcggcc------gagaaggcgccggccgggaagaa 637
Query: 173 gccgaaggcggagaagcggctcccggcgggaaaatccgccggcaaggaaggcggtgttga 232
||| || ||||||||||| || || || || || |||||||||||||| ||||| | ||
Sbjct: 636 gcccaaagcggagaagcgtctgcccgctggcaagtccgccggcaaggagggcggcggcga 577
Query: 233 ---caagaaggggcggaagaaggccaagaagagcgtggagacgtacaagatctacatctt 289
|||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 576 gggcaagcggggccggaagaagggcaagaagagcgtggagacgtacaagatctacatctt 517
Query: 290 caaggtgctgaagcaggtgcacccggacatcggcatctcctccaaggccatgtccatcat 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 caaggtgctgaagcaggtgcacccggacatcggcatctcctccaaggccatgtccatcat 457
Query: 350 gaactccttcatcaacgacatcttcgagaagctcgccggcgaggcggccaagctcgcccg 409
|||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||
Sbjct: 456 gaactccttcatcaacgacatcttcgagaagctcgccgccgaggccgccaagctcgcgcg 397
Query: 410 ctacaacaagaagcccaccatcacctcccgggagatccagacctccgtccgcctcgttct 469
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 396 gtacaacaagaagcccaccatcacctcccgcgagatccagacctccgtccgcctcgtcct 337
Query: 470 acccggcgagctcgccaagcacgccgtctcggagggcaccaaggccgtcaccaagttcac 529
||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 336 ccccggggagctcgcgaagcacgccgtctctgagggcaccaaggccgtcaccaagttcac 277
Query: 530 ctcgtccta 538
|||||||||
Sbjct: 276 ctcgtccta 268
>gb|BF480894.1|BF480894 FM1_14_F11.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 507
Score = 521 bits (263), Expect = e-146
Identities = 390/432 (90%), Gaps = 9/432 (2%)
Strand = Plus / Plus
Query: 79 cgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcagaggaggagcccg 138
||||||| |||||||| ||||||||||| ||||||||||||| || |||||||||||||
Sbjct: 82 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagctggcggaggaggagcccg 141
Query: 139 cggccccggcggagaaggcccccgctgggaagaagccgaaggcggagaagcggctcccgg 198
||||| |||||||| || || ||||||||||| |||||||||||||| ||||| |
Sbjct: 142 cggcc------gagaaggcgccggccgggaagaagcccaaggcggagaagcgtctccccg 195
Query: 199 cgggaaaatccgccggcaaggaaggcggtgttga---caagaaggggcggaagaaggcca 255
| || || |||||||||||||| ||||| | || |||| ||| |||||||||| ||
Sbjct: 196 ctggcaagtccgccggcaaggagggcggcggcgagggcaagcggggccggaagaagggca 255
Query: 256 agaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccgg 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 agaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccgg 315
Query: 316 acatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcg 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 acatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcg 375
Query: 376 agaagctcgccggcgaggcggccaagctcgcccgctacaacaagaagcccaccatcacct 435
|||||||||||| |||||| ||||||||||| || |||||||||||||||||||||||||
Sbjct: 376 agaagctcgccgccgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacct 435
Query: 436 cccgggagatccagacctccgtccgcctcgttctacccggcgagctcgccaagcacgccg 495
|||| |||||||||||||||||||||||||| || ||||| |||||||| ||||||||||
Sbjct: 436 cccgcgagatccagacctccgtccgcctcgtcctccccggggagctcgcgaagcacgccg 495
Query: 496 tctcggagggca 507
|||| |||||||
Sbjct: 496 tctctgagggca 507
>gb|AI724175.1|AI724175 RHIZ1_8_A04.y2_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 509
Score = 509 bits (257), Expect = e-142
Identities = 352/383 (91%), Gaps = 3/383 (0%)
Strand = Plus / Plus
Query: 150 gagaaggcccccgctgggaagaagccgaaggcggagaagcggctcccggcgggaaaatcc 209
||||||||||| || ||||||||||| |||||||||||||| ||||||||||| || ||
Sbjct: 5 gagaaggccccggcggggaagaagcccaaggcggagaagcgcctcccggcgggcaagtcg 64
Query: 210 gccggcaaggaaggcggtgttgacaagaaggggcggaagaaggccaagaagagcgtggag 269
||||||||||| ||||| | |||||||||| |||||||||||||||| ||||||
Sbjct: 65 gccggcaaggagggcggcg---acaagaagggcaagaagaaggccaagaagtcggtggag 121
Query: 270 acgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcggcatctcc 329
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 122 acctacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcatctcc 181
Query: 330 tccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctcgccggc 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctcgccggc 241
Query: 390 gaggcggccaagctcgcccgctacaacaagaagcccaccatcacctcccgggagatccag 449
||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 242 gaggccgccaagctcgcccgctacaacaagaagcccaccatcacctccagggagatccag 301
Query: 450 acctccgtccgcctcgttctacccggcgagctcgccaagcacgccgtctcggagggcacc 509
|| || || |||||||| || || ||||||||||||||||||||||| || |||||||||
Sbjct: 302 acgtcggtgcgcctcgtcctcccaggcgagctcgccaagcacgccgtgtccgagggcacc 361
Query: 510 aaggccgtcaccaagttcacctc 532
|||||||| ||||||||||||||
Sbjct: 362 aaggccgttaccaagttcacctc 384
>gb|AW680031.1|AW680031 WS1_34_A02.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 558
Score = 505 bits (255), Expect = e-141
Identities = 380/421 (90%), Gaps = 3/421 (0%)
Strand = Plus / Plus
Query: 115 agaagcccgcagaggaggagcccgcggccccg---gcggagaaggcccccgctgggaaga 171
|||||||||| ||||||||||||||| || | |||||||||||||| || |||||||
Sbjct: 1 agaagcccgcggaggaggagcccgcgaccgagaaggcggagaaggccccggcggggaaga 60
Query: 172 agccgaaggcggagaagcggctcccggcgggaaaatccgccggcaaggaaggcggtgttg 231
|||| ||||| |||||||||||||| ||||| || |||||||||||||| ||||| | |
Sbjct: 61 agcccaaggccgagaagcggctccccgcgggcaagtccgccggcaaggagggcggcgagg 120
Query: 232 acaagaaggggcggaagaaggccaagaagagcgtggagacgtacaagatctacatcttca 291
|||||||||| ||||||||| |||||| ||||||||| |||||||||||||||||||
Sbjct: 121 gcaagaaggggaagaagaaggcgaagaagtccgtggagacctacaagatctacatcttca 180
Query: 292 aggtgctgaagcaggtgcacccggacatcggcatctcctccaaggccatgtccatcatga 351
||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 181 aggtgctcaagcaggtgcacccggacatcggcatctcgtccaaggccatgtccatcatga 240
Query: 352 actccttcatcaacgacatcttcgagaagctcgccggcgaggcggccaagctcgcccgct 411
||||||||||||||||||||||||||||||| || | |||| | |||||||| || ||||
Sbjct: 241 actccttcatcaacgacatcttcgagaagcttgcggccgagtccgccaagctggcgcgct 300
Query: 412 acaacaagaagcccaccatcacctcccgggagatccagacctccgtccgcctcgttctac 471
|||||||||||||||||||||||||||| |||||||||||||| || |||||||| || |
Sbjct: 301 acaacaagaagcccaccatcacctcccgcgagatccagacctcggtgcgcctcgtcctcc 360
Query: 472 ccggcgagctcgccaagcacgccgtctcggagggcaccaaggccgtcaccaagttcacct 531
|||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 361 ccggcgagctcgccaagcacgccgtctccgagggcaccaaggctgtcaccaagttcacct 420
Query: 532 c 532
|
Sbjct: 421 c 421
>gb|CW155044.1|CW155044 104_557_11145924_148_36361_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11145924, DNA
sequence
Length = 679
Score = 500 bits (252), Expect = e-140
Identities = 288/300 (96%)
Strand = Plus / Minus
Query: 239 ggggcggaagaaggccaagaagagcgtggagacgtacaagatctacatcttcaaggtgct 298
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 ggggccgaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgct 573
Query: 299 gaagcaggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactcctt 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 gaagcaggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactcctt 513
Query: 359 catcaacgacatcttcgagaagctcgccggcgaggcggccaagctcgcccgctacaacaa 418
||||||||||||||||||||||||||||| |||||| ||||||||||| || ||||||||
Sbjct: 512 catcaacgacatcttcgagaagctcgccgccgaggccgccaagctcgcgcggtacaacaa 453
Query: 419 gaagcccaccatcacctcccgggagatccagacctccgtccgcctcgttctacccggcga 478
||||||||||||||||||||| |||||||||||||||||||||||||| || ||||| ||
Sbjct: 452 gaagcccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccgggga 393
Query: 479 gctcgccaagcacgccgtctcggagggcaccaaggccgtcaccaagttcacctcgtccta 538
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gctcgcgaagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcgtccta 333
>gb|BE355526.1|BE355526 DG1_114_A03.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 662
Score = 498 bits (251), Expect = e-139
Identities = 353/387 (91%)
Strand = Plus / Plus
Query: 146 ggcggagaaggcccccgctgggaagaagccgaaggcggagaagcggctcccggcgggaaa 205
||||||||||||||| || ||||||||||| ||||| |||||||||||||| ||||| ||
Sbjct: 29 ggcggagaaggccccggcggggaagaagcccaaggccgagaagcggctccccgcgggcaa 88
Query: 206 atccgccggcaaggaaggcggtgttgacaagaaggggcggaagaaggccaagaagagcgt 265
|||||||||||||| ||||| | | |||||||||| ||||||||| |||||| |||
Sbjct: 89 gtccgccggcaaggagggcggcgagggcaagaaggggaagaagaaggcgaagaagtccgt 148
Query: 266 ggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcggcat 325
|||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 149 ggagacctacaagatctacatcttcaaggtgctcaagcaggtgcacccggacatcggcat 208
Query: 326 ctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctcgc 385
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 209 ctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagcttgc 268
Query: 386 cggcgaggcggccaagctcgcccgctacaacaagaagcccaccatcacctcccgggagat 445
| |||| | |||||||| || |||||||||||||||||||||||||||||||| |||||
Sbjct: 269 ggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacctcccgcgagat 328
Query: 446 ccagacctccgtccgcctcgttctacccggcgagctcgccaagcacgccgtctcggaggg 505
||||||||| || |||||||| || ||||||||||||||||||||||||||||| |||||
Sbjct: 329 ccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgtctccgaggg 388
Query: 506 caccaaggccgtcaccaagttcacctc 532
||||||||| |||||||||||||||||
Sbjct: 389 caccaaggctgtcaccaagttcacctc 415
>gb|BG410872.1|BG410872 EM1_27_A01.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 537
Score = 498 bits (251), Expect = e-139
Identities = 353/387 (91%)
Strand = Plus / Plus
Query: 146 ggcggagaaggcccccgctgggaagaagccgaaggcggagaagcggctcccggcgggaaa 205
||||||||||||||| || ||||||||||| ||||| |||||||||||||| ||||| ||
Sbjct: 1 ggcggagaaggccccggcggggaagaagcccaaggccgagaagcggctccccgcgggcaa 60
Query: 206 atccgccggcaaggaaggcggtgttgacaagaaggggcggaagaaggccaagaagagcgt 265
|||||||||||||| ||||| | | |||||||||| ||||||||| |||||| |||
Sbjct: 61 gtccgccggcaaggagggcggcgagggcaagaaggggaagaagaaggcgaagaagtccgt 120
Query: 266 ggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcggcat 325
|||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 121 ggagacctacaagatctacatcttcaaggtgctcaagcaggtgcacccggacatcggcat 180
Query: 326 ctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctcgc 385
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 181 ctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagcttgc 240
Query: 386 cggcgaggcggccaagctcgcccgctacaacaagaagcccaccatcacctcccgggagat 445
| |||| | |||||||| || |||||||||||||||||||||||||||||||| |||||
Sbjct: 241 ggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacctcccgcgagat 300
Query: 446 ccagacctccgtccgcctcgttctacccggcgagctcgccaagcacgccgtctcggaggg 505
||||||||| || |||||||| || ||||||||||||||||||||||||||||| |||||
Sbjct: 301 ccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgtctccgaggg 360
Query: 506 caccaaggccgtcaccaagttcacctc 532
||||||||| |||||||||||||||||
Sbjct: 361 caccaaggctgtcaccaagttcacctc 387
>gb|BE599532.1|BE599532 PI1_88_F07.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 491
Score = 496 bits (250), Expect = e-138
Identities = 377/419 (89%), Gaps = 9/419 (2%)
Strand = Plus / Plus
Query: 81 atggcacccaaggcggagaagaagccggcggcgaagaagcccgcagaggaggagcccgcg 140
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 81 atggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgcg 140
Query: 141 gccccggcggagaaggcccccgctgggaagaagccgaaggcggagaagcggctcccggcg 200
||| |||||||| || || ||||||||||| |||||||||||||| |||||||||
Sbjct: 141 gcc------gagaaggcgccggcggggaagaagcccaaggcggagaagcgcctcccggcg 194
Query: 201 ggaaaatccgccggcaaggaaggcggtgttgacaagaaggggcggaagaaggccaagaag 260
|| || || ||||||||||| || || ||||||||||| ||||||||| ||||||
Sbjct: 195 ggcaagtcggccggcaaggagggggg---cgacaagaagggcaagaagaaggctaagaag 251
Query: 261 agcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatc 320
|||||||| ||||||||||||||||||||||||||||||||||| ||||| |||| |
Sbjct: 252 tcggtggagacctacaagatctacatcttcaaggtgctgaagcaggtccaccccgacacc 311
Query: 321 ggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaag 380
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 312 ggcatctcctccaaggccatgtccatcatgaattccttcatcaacgatatcttcgagaag 371
Query: 381 ctcgccggcgaggcggccaagctcgcccgctacaacaagaagcccaccatcacctcccgg 440
||||||||||| || ||||||||||| ||||||||||| |||||||||||||||||| ||
Sbjct: 372 ctcgccggcgaagccgccaagctcgcgcgctacaacaaaaagcccaccatcacctccagg 431
Query: 441 gagatccagacctccgtccgcctcgttctacccggcgagctcgccaagcacgccgtctc 499
|||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 432 gagatccagacctccgtccgcctcgtcctccccggcgagctcgccaagcacgccgtctc 490
>gb|CW297850.1|CW297850 104_780_11462260_116_35647_012 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11462260, DNA
sequence
Length = 662
Score = 490 bits (247), Expect = e-137
Identities = 332/359 (92%), Gaps = 6/359 (1%)
Strand = Plus / Plus
Query: 177 aaggcggagaagcggctcccggcgggaaaatc---cgccggcaaggaaggcggtgttgac 233
|||||||||||||||||||||||||| || || |||||||||||| ||||| | |
Sbjct: 5 aaggcggagaagcggctcccggcgggcaagtcgtccgccggcaaggagggcggcg---ag 61
Query: 234 aagaaggggcggaagaaggccaagaagagcgtggagacgtacaagatctacatcttcaag 293
||||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 62 aagaaggggaggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaag 121
Query: 294 gtgctgaagcaggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaac 353
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gtcctgaagcaggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaac 181
Query: 354 tccttcatcaacgacatcttcgagaagctcgccggcgaggcggccaagctcgcccgctac 413
||||||||||||||||||||||||||||| |||| ||| | ||||||||||||||||||
Sbjct: 182 tccttcatcaacgacatcttcgagaagctggccgcggagtccgccaagctcgcccgctac 241
Query: 414 aacaagaagcccaccatcacctcccgggagatccagacctccgtccgcctcgttctaccc 473
||||||||||||||||| |||||||| |||||||||||||||||||||||||| || |||
Sbjct: 242 aacaagaagcccaccattacctcccgcgagatccagacctccgtccgcctcgtcctcccc 301
Query: 474 ggcgagctcgccaagcacgccgtctcggagggcaccaaggccgtcaccaagttcacctc 532
|| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 302 ggggagctcgccaagcacgccgtctccgagggtaccaaggccgtcaccaagttcacctc 360
>gb|CW410847.1|CW410847 fsbb001f105m09f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f105m09, DNA
sequence
Length = 733
Score = 490 bits (247), Expect = e-137
Identities = 346/377 (91%), Gaps = 4/377 (1%)
Strand = Plus / Minus
Query: 166 ggaagaagccgaaggcggagaagcggctcccggcgggaaaatccgccggcaaggaaggcg 225
|||||||||| || ||||||||||| || || || || || ||||||| |||||| ||||
Sbjct: 733 ggaagaagcccaaagcggagaagcgtctgcccgctggcaagtccgccgccaaggagggcg 674
Query: 226 gtgttga---caagaaggggcggaagaaggccaagaagagcgtggagacgtac-aagatc 281
| | || |||| ||| |||||||||| |||||||||||||||||||||| ||||||
Sbjct: 673 gcggcgaggccaagcggggccggaagaagggcaagaagagcgtggagacgtaccaagatc 614
Query: 282 tacatcttcaaggtgctgaagcaggtgcacccggacatcggcatctcctccaaggccatg 341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tacatcttcaaggtgctgaagcaggtgcacccggacatcggcatctcctccaaggccatg 554
Query: 342 tccatcatgaactccttcatcaacgacatcttcgagaagctcgccggcgaggcggccaag 401
|||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 553 tccatcatgaactccttcatcaacgacatcttcgagaagctcgccgccgaggccgccaag 494
Query: 402 ctcgcccgctacaacaagaagcccaccatcacctcccgggagatccagacctccgtccgc 461
||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 493 ctcgcgcggtacaacaagaagcccaccatcacctcccgcgagatccagacctccgtccgc 434
Query: 462 ctcgttctacccggcgagctcgccaagcacgccgtctcggagggcaccaaggccgtcacc 521
||||| || ||||| |||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 433 ctcgtcctccccggggagctcgcgaagcacgccgtctctgagggcaccaaggccgtcacc 374
Query: 522 aagttcacctcgtccta 538
|||||||||||||||||
Sbjct: 373 aagttcacctcgtccta 357
>gb|BG102543.1|BG102543 RHIZ2_34_D04.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 495
Score = 490 bits (247), Expect = e-137
Identities = 341/371 (91%), Gaps = 6/371 (1%)
Strand = Plus / Plus
Query: 165 gggaagaagccgaaggcggagaagcggctcccggcgggaaaatc---cgccggcaaggaa 221
||||||||||| |||||||||||||||||||||||||| || || || |||||||||
Sbjct: 2 gggaagaagcccaaggcggagaagcggctcccggcgggcaagtcgtccgtcggcaaggag 61
Query: 222 ggcggtgttgacaagaaggggcggaagaaggccaagaagagcgtggagacgtacaagatc 281
||||| | | ||||||||| ||||||||| ||||||||||||||||| |||||||||
Sbjct: 62 ggcggcg---agaagaaggggaggaagaaggggaagaagagcgtggagacctacaagatc 118
Query: 282 tacatcttcaaggtgctgaagcaggtgcacccggacatcggcatctcctccaaggccatg 341
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 tacatcttcaaggtcctgaagcaggtgcacccggacatcggcatctcctccaaggccatg 178
Query: 342 tccatcatgaactccttcatcaacgacatcttcgagaagctcgccggcgaggcggccaag 401
||||||||||||||||||||||||||||||||||||||||| |||| ||| | ||||||
Sbjct: 179 tccatcatgaactccttcatcaacgacatcttcgagaagctggccgcggagtccgccaag 238
Query: 402 ctcgcccgctacaacaagaagcccaccatcacctcccgggagatccagacctccgtccgc 461
||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 239 ctcgcccgctacaacaagaagcccaccattacctcccgcgagatccagacctccgtccgc 298
Query: 462 ctcgttctacccggcgagctcgccaagcacgccgtctcggagggcaccaaggccgtcacc 521
||||| || ||||| ||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 299 ctcgtcctccccggggagctcgccaagcacgccgtctccgagggtaccaaggccgtcacc 358
Query: 522 aagttcacctc 532
|||||||||||
Sbjct: 359 aagttcacctc 369
>gb|BF704683.1|BF704683 FM1_50_B08.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 563
Score = 482 bits (243), Expect = e-134
Identities = 350/385 (90%), Gaps = 3/385 (0%)
Strand = Plus / Plus
Query: 146 ggcggagaaggcccccgctgggaagaagccgaaggcggagaagcggctcccggcgggaaa 205
|||||||||||| ||||| ||||||||||| ||||| |||||||| || || || ||
Sbjct: 138 ggcggagaaggcgcccgcagggaagaagcccaaggccgagaagcgcctgcccgcctccaa 197
Query: 206 atccgccggcaaggaaggcggtgttgacaagaaggggcggaagaaggccaagaagagcgt 265
||| |||||||||| ||||| | | ||||||||| |||||||||||||||||||||
Sbjct: 198 gtcctccggcaaggagggcggcg---agaagaaggggaagaagaaggccaagaagagcgt 254
Query: 266 ggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcggcat 325
|||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 255 ggagacctacaaaatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcat 314
Query: 326 ctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctcgc 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctcgc 374
Query: 386 cggcgaggcggccaagctcgcccgctacaacaagaagcccaccatcacctcccgggagat 445
||||||||| ||||||||||| || ||||||||||||||||||||||||||||| |||||
Sbjct: 375 cggcgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgcgagat 434
Query: 446 ccagacctccgtccgcctcgttctacccggcgagctcgccaagcacgccgtctcggaggg 505
||| |||||||| |||||||| || ||||| ||||||||||||||||||||||| |||||
Sbjct: 435 ccaaacctccgtgcgcctcgtcctccccggagagctcgccaagcacgccgtctccgaggg 494
Query: 506 caccaaggccgtcaccaagttcacc 530
||||||||||||||||||||||||
Sbjct: 495 aaccaaggccgtcaccaagttcacc 519
Score = 61.9 bits (31), Expect = 7e-008
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 75 gacccgatggcacccaaggcggagaagaagccggcggcgaagaagcc 121
||||||||||| |||||||| ||||||||||| |||| |||||||||
Sbjct: 76 gacccgatggcgcccaaggccgagaagaagccagcggagaagaagcc 122
>gb|AI723845.1|AI723845 RHIZ1_28_B06.y1_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 557
Score = 478 bits (241), Expect = e-133
Identities = 268/277 (96%)
Strand = Plus / Plus
Query: 259 agagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggaca 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggaca 61
Query: 319 tcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgaga 378
|||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 62 tcggtatctcctccaaggccatgtccatcatgaactccttcatcaatgacatcttcgaga 121
Query: 379 agctcgccggcgaggcggccaagctcgcccgctacaacaagaagcccaccatcacctccc 438
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |
Sbjct: 122 agctcgccggcgaggccgccaagctcgcccgctacaacaagaagcccaccatcacttctc 181
Query: 439 gggagatccagacctccgtccgcctcgttctacccggcgagctcgccaagcacgccgtct 498
|||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||
Sbjct: 182 gggagatccagacctccgtccgcctcgtcctccccggggagctcgccaagcacgccgtct 241
Query: 499 cggagggcaccaaggccgtcaccaagttcacctcgtc 535
| |||||||||||||||||||||||||||||||||||
Sbjct: 242 ctgagggcaccaaggccgtcaccaagttcacctcgtc 278
>gb|BE355445.1|BE355445 DG1_114_A03.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 452
Score = 478 bits (241), Expect = e-133
Identities = 354/391 (90%), Gaps = 3/391 (0%)
Strand = Plus / Plus
Query: 78 ccgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcagaggaggagccc 137
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 62 ccgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagccc 121
Query: 138 gcggccccg---gcggagaaggcccccgctgggaagaagccgaaggcggagaagcggctc 194
||| || | |||||||||||||| || ||||||||||| ||||| ||||||||||||
Sbjct: 122 gcgaccgagaaggcggagaaggccccggcggggaagaagcccaaggccgagaagcggctc 181
Query: 195 ccggcgggaaaatccgccggcaaggaaggcggtgttgacaagaaggggcggaagaaggcc 254
|| ||||| || |||||||||||||| ||||| | | |||||||||| |||||||||
Sbjct: 182 cccgcgggcaagtccgccggcaaggagggcggcgagggcaagaaggggaagaagaaggcg 241
Query: 255 aagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccg 314
|||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 242 aagaagtccgtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcacccg 301
Query: 315 gacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttc 374
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gacatcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttc 361
Query: 375 gagaagctcgccggcgaggcggccaagctcgcccgctacaacaagaagcccaccatcacc 434
|||||||| || | |||| | |||||||| || |||||||||||||||||||||||||||
Sbjct: 362 gagaagcttgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacc 421
Query: 435 tcccgggagatccagacctccgtccgcctcg 465
||||| |||||||||||||| || |||||||
Sbjct: 422 tcccgcgagatccagacctcggtgcgcctcg 452
>gb|CW306661.1|CW306661 104_792_11466961_148_35713_007 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11466961, DNA
sequence
Length = 711
Score = 476 bits (240), Expect = e-132
Identities = 276/288 (95%)
Strand = Plus / Plus
Query: 248 gaaggccaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggt 307
|||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 1 gaaggccaagaagagcgtggagacctacaagatctacatcttcaaggtgctcaagcaggt 60
Query: 308 gcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacga 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacga 120
Query: 368 catcttcgagaagctcgccggcgaggcggccaagctcgcccgctacaacaagaagcccac 427
|||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||
Sbjct: 121 catcttcgagaagctcgccgccgagtccgccaagctcgcccgctacaacaagaagcccac 180
Query: 428 catcacctcccgggagatccagacctccgtccgcctcgttctacccggcgagctcgccaa 487
|||||| ||||| ||||||||||| |||||||||||||| || ||||| |||||||||||
Sbjct: 181 catcacgtcccgagagatccagacttccgtccgcctcgtcctccccggggagctcgccaa 240
Query: 488 gcacgccgtctcggagggcaccaaggccgtcaccaagttcacctcgtc 535
|||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 241 gcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcgtc 288
>gb|BG052252.1|BG052252 RHIZ2_12_B05.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 464
Score = 468 bits (236), Expect = e-130
Identities = 327/356 (91%), Gaps = 6/356 (1%)
Strand = Plus / Plus
Query: 180 gcggagaagcggctcccggcgggaaaatc---cgccggcaaggaaggcggtgttgacaag 236
||||||||||||||||||||||| || || || ||||||||| ||||| | | |||
Sbjct: 1 gcggagaagcggctcccggcgggcaagtcgtccgtcggcaaggagggcggcg---agaag 57
Query: 237 aaggggcggaagaaggccaagaagagcgtggagacgtacaagatctacatcttcaaggtg 296
|||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 58 aaggggaggaagaaggggaagaagagcgtggagacctacaagatctacatcttcaaggtc 117
Query: 297 ctgaagcaggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactcc 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 ctgaagcaggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactcc 177
Query: 357 ttcatcaacgacatcttcgagaagctcgccggcgaggcggccaagctcgcccgctacaac 416
|||||||||||||||||||||||||| |||| ||| | |||||||||||||||||||||
Sbjct: 178 ttcatcaacgacatcttcgagaagctggccgcggagtccgccaagctcgcccgctacaac 237
Query: 417 aagaagcccaccatcacctcccgggagatccagacctccgtccgcctcgttctacccggc 476
|||||||||||||| |||||||| |||||||||||||||||||||||||| || |||||
Sbjct: 238 aagaagcccaccattacctcccgcgagatccagacctccgtccgcctcgtcctccccggg 297
Query: 477 gagctcgccaagcacgccgtctcggagggcaccaaggccgtcaccaagttcacctc 532
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 298 gagctcgccaagcacgccgtctccgagggtaccaaggccgtcaccaagttcacctc 353
>gb|CN150853.1|CN150853 WOUND1_71_G11.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_71_G11_A002 5', mRNA sequence
Length = 765
Score = 466 bits (235), Expect = e-129
Identities = 348/385 (90%), Gaps = 3/385 (0%)
Strand = Plus / Plus
Query: 146 ggcggagaaggcccccgctgggaagaagccgaaggcggagaagcggctcccggcgggaaa 205
|||||||||||| |||||||| |||||||| ||||| |||||||| || || || ||
Sbjct: 139 ggcggagaaggcgcccgctggaaagaagcccaaggccgagaagcgcctgcccgcctccaa 198
Query: 206 atccgccggcaaggaaggcggtgttgacaagaaggggcggaagaaggccaagaagagcgt 265
||| |||| ||||| ||||| | | ||||||||| |||||||||||||||||||||
Sbjct: 199 gtcctccggtaaggagggcggcg---agaagaaggggaagaagaaggccaagaagagcgt 255
Query: 266 ggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcggcat 325
|||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 256 ggagacctacaaaatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcat 315
Query: 326 ctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctcgc 385
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 316 ctcctccaaggccatgtccatcatgaactccttcatcaatgacatcttcgagaagctcgc 375
Query: 386 cggcgaggcggccaagctcgcccgctacaacaagaagcccaccatcacctcccgggagat 445
||||||||| ||||||||||| || ||||||||||||||||||||||||||||| |||||
Sbjct: 376 cggcgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgcgagat 435
Query: 446 ccagacctccgtccgcctcgttctacccggcgagctcgccaagcacgccgtctcggaggg 505
||| |||||||| |||||||| || ||||| ||||||||||||||||||||||| |||||
Sbjct: 436 ccaaacctccgtgcgcctcgtcctccccggagagctcgccaagcacgccgtctccgaggg 495
Query: 506 caccaaggccgtcaccaagttcacc 530
||||||||||||||||||||||||
Sbjct: 496 aaccaaggccgtcaccaagttcacc 520
Score = 61.9 bits (31), Expect = 7e-008
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 75 gacccgatggcacccaaggcggagaagaagccggcggcgaagaagcc 121
||||||||||| |||||||| ||||||||||| |||| |||||||||
Sbjct: 77 gacccgatggcgcccaaggccgagaagaagccagcggagaagaagcc 123
>gb|BF481909.1|BF481909 FM1_22_H04.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 506
Score = 462 bits (233), Expect = e-128
Identities = 281/297 (94%)
Strand = Plus / Plus
Query: 234 aagaaggggcggaagaaggccaagaagagcgtggagacgtacaagatctacatcttcaag 293
||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 11 aagaaggggaagaagaaggccaagaagagcgtggagacctacaaaatctacatcttcaag 70
Query: 294 gtgctgaagcaggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaac 353
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 71 gtgctgaagcaggtgcaccccgacatcggcatctcctccaaggccatgtccatcatgaac 130
Query: 354 tccttcatcaacgacatcttcgagaagctcgccggcgaggcggccaagctcgcccgctac 413
||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||
Sbjct: 131 tccttcatcaacgacatcttcgagaagctcgccggcgaggccgccaagctcgcgcggtac 190
Query: 414 aacaagaagcccaccatcacctcccgggagatccagacctccgtccgcctcgttctaccc 473
|||||||||||||||||||||||||| |||||||| |||||||| |||||||| || |||
Sbjct: 191 aacaagaagcccaccatcacctcccgcgagatccaaacctccgtgcgcctcgtcctcccc 250
Query: 474 ggcgagctcgccaagcacgccgtctcggagggcaccaaggccgtcaccaagttcacc 530
|| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 251 ggagagctcgccaagcacgccgtctccgagggaaccaaggccgtcaccaagttcacc 307
>gb|BF656458.1|BF656458 FM1_50_B08.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 556
Score = 462 bits (233), Expect = e-128
Identities = 281/297 (94%)
Strand = Plus / Plus
Query: 234 aagaaggggcggaagaaggccaagaagagcgtggagacgtacaagatctacatcttcaag 293
||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 8 aagaaggggaagaagaaggccaagaagagcgtggagacctacaaaatctacatcttcaag 67
Query: 294 gtgctgaagcaggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaac 353
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 68 gtgctgaagcaggtgcaccccgacatcggcatctcctccaaggccatgtccatcatgaac 127
Query: 354 tccttcatcaacgacatcttcgagaagctcgccggcgaggcggccaagctcgcccgctac 413
||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||
Sbjct: 128 tccttcatcaacgacatcttcgagaagctcgccggcgaggccgccaagctcgcgcggtac 187
Query: 414 aacaagaagcccaccatcacctcccgggagatccagacctccgtccgcctcgttctaccc 473
|||||||||||||||||||||||||| |||||||| |||||||| |||||||| || |||
Sbjct: 188 aacaagaagcccaccatcacctcccgcgagatccaaacctccgtgcgcctcgtcctcccc 247
Query: 474 ggcgagctcgccaagcacgccgtctcggagggcaccaaggccgtcaccaagttcacc 530
|| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 248 ggagagctcgccaagcacgccgtctccgagggaaccaaggccgtcaccaagttcacc 304
>gb|AW564395.1|AW564395 LG1_292_F12.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 568
Score = 458 bits (231), Expect = e-127
Identities = 347/385 (90%), Gaps = 3/385 (0%)
Strand = Plus / Plus
Query: 146 ggcggagaaggcccccgctgggaagaagccgaaggcggagaagcggctcccggcgggaaa 205
|||||||||||| ||||| || |||||||| ||||| |||||||| || || || ||
Sbjct: 133 ggcggagaaggcgcccgcaggaaagaagcccaaggccgagaagcgcctgcccgcctccaa 192
Query: 206 atccgccggcaaggaaggcggtgttgacaagaaggggcggaagaaggccaagaagagcgt 265
||| |||| ||||| ||||| | | ||||||||| |||||||||||||||||||||
Sbjct: 193 gtcctccggtaaggagggcggcg---agaagaaggggaagaagaaggccaagaagagcgt 249
Query: 266 ggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcggcat 325
|||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 250 ggagacctacaaaatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcat 309
Query: 326 ctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctcgc 385
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 310 ctcctccaaggccatgtccatcatgaactccttcatcaatgacatcttcgagaagctcgc 369
Query: 386 cggcgaggcggccaagctcgcccgctacaacaagaagcccaccatcacctcccgggagat 445
||||||||| ||||||||||| || ||||||||||||||||||||||||||||| |||||
Sbjct: 370 cggcgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgcgagat 429
Query: 446 ccagacctccgtccgcctcgttctacccggcgagctcgccaagcacgccgtctcggaggg 505
||| |||||||| |||||||| || ||||| ||||||||||||||||||||||| |||||
Sbjct: 430 ccaaacctccgtgcgcctcgtcctccccggagagctcgccaagcacgccgtctccgaggg 489
Query: 506 caccaaggccgtcaccaagttcacc 530
||||||||||||||||||||||||
Sbjct: 490 aaccaaggccgtcaccaagttcacc 514
Score = 61.9 bits (31), Expect = 7e-008
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 75 gacccgatggcacccaaggcggagaagaagccggcggcgaagaagcc 121
||||||||||| |||||||| ||||||||||| |||| |||||||||
Sbjct: 71 gacccgatggcgcccaaggccgagaagaagccagcggagaagaagcc 117
>gb|BE593143.1|BE593143 WS1_98_A10.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 596
Score = 458 bits (231), Expect = e-127
Identities = 347/385 (90%), Gaps = 3/385 (0%)
Strand = Plus / Plus
Query: 146 ggcggagaaggcccccgctgggaagaagccgaaggcggagaagcggctcccggcgggaaa 205
|||||||||||| ||||| || |||||||| ||||| |||||||| || || || ||
Sbjct: 79 ggcggagaaggcgcccgcaggaaagaagcccaaggccgagaagcgcctgcccgcctccaa 138
Query: 206 atccgccggcaaggaaggcggtgttgacaagaaggggcggaagaaggccaagaagagcgt 265
||| |||| ||||| ||||| | | ||||||||| |||||||||||||||||||||
Sbjct: 139 gtcctccggtaaggagggcggcg---agaagaaggggaagaagaaggccaagaagagcgt 195
Query: 266 ggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcggcat 325
|||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 196 ggagacctacaaaatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcat 255
Query: 326 ctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctcgc 385
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 256 ctcctccaaggccatgtccatcatgaactccttcatcaatgacatcttcgagaagctcgc 315
Query: 386 cggcgaggcggccaagctcgcccgctacaacaagaagcccaccatcacctcccgggagat 445
||||||||| ||||||||||| || ||||||||||||||||||||||||||||| |||||
Sbjct: 316 cggcgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgcgagat 375
Query: 446 ccagacctccgtccgcctcgttctacccggcgagctcgccaagcacgccgtctcggaggg 505
||| |||||||| |||||||| || ||||| ||||||||||||||||||||||| |||||
Sbjct: 376 ccaaacctccgtgcgcctcgtcctccccggagagctcgccaagcacgccgtctccgaggg 435
Query: 506 caccaaggccgtcaccaagttcacc 530
||||||||||||||||||||||||
Sbjct: 436 aaccaaggccgtcaccaagttcacc 460
Score = 61.9 bits (31), Expect = 7e-008
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 75 gacccgatggcacccaaggcggagaagaagccggcggcgaagaagcc 121
||||||||||| |||||||| ||||||||||| |||| |||||||||
Sbjct: 17 gacccgatggcgcccaaggccgagaagaagccagcggagaagaagcc 63
>gb|CD431873.1|CD431873 ETH1_11_A02.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_11_A02_A002 5', mRNA sequence
Length = 667
Score = 458 bits (231), Expect = e-127
Identities = 347/385 (90%), Gaps = 3/385 (0%)
Strand = Plus / Plus
Query: 146 ggcggagaaggcccccgctgggaagaagccgaaggcggagaagcggctcccggcgggaaa 205
|||||||||||| ||||| || |||||||| ||||| |||||||| || || || ||
Sbjct: 157 ggcggagaaggcgcccgcaggaaagaagcccaaggccgagaagcgcctgcccgcctccaa 216
Query: 206 atccgccggcaaggaaggcggtgttgacaagaaggggcggaagaaggccaagaagagcgt 265
||| |||| ||||| ||||| | | ||||||||| |||||||||||||||||||||
Sbjct: 217 gtcctccggtaaggagggcggcg---agaagaaggggaagaagaaggccaagaagagcgt 273
Query: 266 ggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcggcat 325
|||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 274 ggagacctacaaaatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcat 333
Query: 326 ctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctcgc 385
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 334 ctcctccaaggccatgtccatcatgaactccttcatcaatgacatcttcgagaagctcgc 393
Query: 386 cggcgaggcggccaagctcgcccgctacaacaagaagcccaccatcacctcccgggagat 445
||||||||| ||||||||||| || ||||||||||||||||||||||||||||| |||||
Sbjct: 394 cggcgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgcgagat 453
Query: 446 ccagacctccgtccgcctcgttctacccggcgagctcgccaagcacgccgtctcggaggg 505
||| |||||||| |||||||| || ||||| ||||||||||||||||||||||| |||||
Sbjct: 454 ccaaacctccgtgcgcctcgtcctccccggagagctcgccaagcacgccgtctccgaggg 513
Query: 506 caccaaggccgtcaccaagttcacc 530
||||||||||||||||||||||||
Sbjct: 514 aaccaaggccgtcaccaagttcacc 538
Score = 61.9 bits (31), Expect = 7e-008
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 75 gacccgatggcacccaaggcggagaagaagccggcggcgaagaagcc 121
||||||||||| |||||||| ||||||||||| |||| |||||||||
Sbjct: 95 gacccgatggcgcccaaggccgagaagaagccagcggagaagaagcc 141
>gb|BE357369.1|BE357369 DG1_148_A05.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 616
Score = 454 bits (229), Expect = e-126
Identities = 277/293 (94%)
Strand = Plus / Plus
Query: 234 aagaaggggcggaagaaggccaagaagagcgtggagacgtacaagatctacatcttcaag 293
||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 197 aagaaggggaagaagaaggccaagaagagcgtcgagacgtacaagatctacatcttcaag 256
Query: 294 gtgctgaagcaggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaac 353
||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 257 gtgctcaagcaggtgcacccggacattggtatctcctccaaggccatgtccatcatgaac 316
Query: 354 tccttcatcaacgacatcttcgagaagctcgccggcgaggcggccaagctcgcccgctac 413
|||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 317 tccttcatcaacgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctac 376
Query: 414 aacaagaagcccaccatcacctcccgggagatccagacctccgtccgcctcgttctaccc 473
|||||||||||||||||||||||||||||||||||||| || || |||||||| || |||
Sbjct: 377 aacaagaagcccaccatcacctcccgggagatccagacgtcggtgcgcctcgtccttccc 436
Query: 474 ggcgagctcgccaagcacgccgtctcggagggcaccaaggccgtcaccaagtt 526
|||||||||||||||||||||||||| |||||||||||||| || ||||||||
Sbjct: 437 ggcgagctcgccaagcacgccgtctccgagggcaccaaggctgttaccaagtt 489
Score = 56.0 bits (28), Expect = 4e-006
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 80 gatggcacccaaggcggagaagaagccggcggcgaagaagcccgcagaggag 131
|||||| |||||||| ||||||||||| |||| ||||||||| || ||||||
Sbjct: 88 gatggcgcccaaggccgagaagaagcccgcggagaagaagccggcggaggag 139
>gb|CD432572.1|CD432572 ETH1_30_E04.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_30_E04_A002 5', mRNA sequence
Length = 667
Score = 454 bits (229), Expect = e-126
Identities = 277/293 (94%)
Strand = Plus / Plus
Query: 234 aagaaggggcggaagaaggccaagaagagcgtggagacgtacaagatctacatcttcaag 293
||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 208 aagaaggggaagaagaaggccaagaagagcgtcgagacgtacaagatctacatcttcaag 267
Query: 294 gtgctgaagcaggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaac 353
||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 268 gtgctcaagcaggtgcacccggacattggtatctcctccaaggccatgtccatcatgaac 327
Query: 354 tccttcatcaacgacatcttcgagaagctcgccggcgaggcggccaagctcgcccgctac 413
|||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 328 tccttcatcaacgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctac 387
Query: 414 aacaagaagcccaccatcacctcccgggagatccagacctccgtccgcctcgttctaccc 473
|||||||||||||||||||||||||||||||||||||| || || |||||||| || |||
Sbjct: 388 aacaagaagcccaccatcacctcccgggagatccagacgtcggtgcgcctcgtccttccc 447
Query: 474 ggcgagctcgccaagcacgccgtctcggagggcaccaaggccgtcaccaagtt 526
|||||||||||||||||||||||||| |||||||||||||| || ||||||||
Sbjct: 448 ggcgagctcgccaagcacgccgtctccgagggcaccaaggctgttaccaagtt 500
Score = 56.0 bits (28), Expect = 4e-006
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 80 gatggcacccaaggcggagaagaagccggcggcgaagaagcccgcagaggag 131
|||||| |||||||| ||||||||||| |||| ||||||||| || ||||||
Sbjct: 99 gatggcgcccaaggccgagaagaagcccgcggagaagaagccggcggaggag 150
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 233,392
Number of Sequences: 832831
Number of extensions: 233392
Number of successful extensions: 71735
Number of sequences better than 0.5: 159
Number of HSP's better than 0.5 without gapping: 158
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 71124
Number of HSP's gapped (non-prelim): 565
length of query: 673
length of database: 491,359,669
effective HSP length: 19
effective length of query: 654
effective length of database: 475,535,880
effective search space: 311000465520
effective search space used: 311000465520
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)