BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.49
(1833 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD213713.1|CD213713 HS1_52_G12.g1_A012 Heat-shocked seed... 722 0.0
gb|BZ341857.1|BZ341857 ic79b05.g1 WGS-SbicolorF (JM107 adap... 714 0.0
gb|CW155043.1|CW155043 104_557_11145924_116_36362_042 Sorgh... 714 0.0
gb|CX606979.1|CX606979 ANR1_6_B05.b1_A002 Anaerobic roots S... 714 0.0
gb|CX607063.1|CX607063 ANR1_6_B05.g1_A002 Anaerobic roots S... 714 0.0
gb|CX610420.1|CX610420 ANR1_18_D02.g1_A002 Anaerobic roots ... 714 0.0
gb|CW410848.1|CW410848 fsbb001f105m09k0 Sorghum methylation... 706 0.0
gb|CD462726.1|CD462726 ETH1_39_B03.g1_A002 Ethylene-treated... 700 0.0
gb|BF480763.1|BF480763 FM1_14_F11.g1_A003 Floral-Induced Me... 656 0.0
gb|BF480894.1|BF480894 FM1_14_F11.b1_A003 Floral-Induced Me... 650 0.0
gb|CL152064.1|CL152064 104_335_10779694_116_31364_094 Sorgh... 630 e-178
gb|CD213618.1|CD213618 HS1_52_G12.b1_A012 Heat-shocked seed... 573 e-161
gb|BE917707.1|BE917707 OV1_6_B04.b1_A002 Ovary 1 (OV1) Sorg... 571 e-161
gb|CW191309.1|CW191309 104_613_11178426_116_36942_075 Sorgh... 551 e-155
gb|CW188377.1|CW188377 104_608_11172997_148_36734_061 Sorgh... 549 e-154
gb|BE917630.1|BE917630 OV1_6_B04.g1_A002 Ovary 1 (OV1) Sorg... 543 e-152
gb|CW319235.1|CW319235 104_811_11474377_148_35884_003 Sorgh... 541 e-152
gb|CW417908.1|CW417908 fsbb001f121c05f0 Sorghum methylation... 541 e-152
gb|BE355360.1|BE355360 DG1_114_A03.b1_A002 Dark Grown 1 (DG... 541 e-152
gb|CW410847.1|CW410847 fsbb001f105m09f0 Sorghum methylation... 539 e-151
gb|BG488416.1|BG488416 RHIZ2_63_D10.b1_A003 Rhizome2 (RHIZ2... 535 e-150
gb|CW183462.1|CW183462 104_599_11164629_148_36672_089 Sorgh... 533 e-149
gb|CD464058.1|CD464058 ETH1_48_H05.b1_A002 Ethylene-treated... 533 e-149
gb|BG240440.1|BG240440 OV1_30_A12.b1_A002 Ovary 1 (OV1) Sor... 527 e-147
gb|CW155044.1|CW155044 104_557_11145924_148_36361_042 Sorgh... 511 e-143
gb|BF704683.1|BF704683 FM1_50_B08.b1_A003 Floral-Induced Me... 504 e-140
gb|CW129063.1|CW129063 104_511_11114353_148_34760_015 Sorgh... 500 e-139
gb|AW680031.1|AW680031 WS1_34_A02.g1_A002 Water-stressed 1 ... 494 e-137
gb|BG411209.1|BG411209 EM1_27_A01.b1_A002 Embryo 1 (EM1) So... 492 e-137
gb|CW128767.1|CW128767 104_510_11114194_148_34755_039 Sorgh... 490 e-136
gb|BE355526.1|BE355526 DG1_114_A03.g1_A002 Dark Grown 1 (DG... 490 e-136
gb|BG410872.1|BG410872 EM1_27_A01.g1_A002 Embryo 1 (EM1) So... 490 e-136
gb|BG488106.1|BG488106 RHIZ2_63_D10.g1_A003 Rhizome2 (RHIZ2... 490 e-136
gb|AW745446.1|AW745446 WS1_34_A02.b1_A002 Water-stressed 1 ... 488 e-135
gb|AW564395.1|AW564395 LG1_292_F12.b1_A002 Light Grown 1 (L... 480 e-133
gb|BE593143.1|BE593143 WS1_98_A10.g1_A002 Water-stressed 1 ... 480 e-133
gb|CD431873.1|CD431873 ETH1_11_A02.g1_A002 Ethylene-treated... 480 e-133
gb|CN150853.1|CN150853 WOUND1_71_G11.g1_A002 Wounded leaves... 480 e-133
gb|BE599532.1|BE599532 PI1_88_F07.b1_A002 Pathogen induced ... 478 e-133
gb|CN126047.1|CN126047 RHOH1_14_H01.g1_A002 Acid- and alkal... 472 e-131
gb|CX608442.1|CX608442 ANR1_38_D08.g1_A002 Anaerobic roots ... 472 e-131
gb|CW297850.1|CW297850 104_780_11462260_116_35647_012 Sorgh... 466 e-129
gb|BG102543.1|BG102543 RHIZ2_34_D04.g1_A003 Rhizome2 (RHIZ2... 466 e-129
gb|AI724175.1|AI724175 RHIZ1_8_A04.y2_A001 Rhizome1 (RHIZ1)... 446 e-123
gb|BG052252.1|BG052252 RHIZ2_12_B05.g1_A003 Rhizome2 (RHIZ2... 444 e-122
gb|CF431776.1|CF431776 NIT1_9_B03.b1_A002 Nitrogen-deficien... 440 e-121
gb|CF489098.1|CF489098 POL1_54_H12.b1_A002 Pollen Sorghum b... 440 e-121
gb|BE593453.1|BE593453 WS1_98_A10.b1_A002 Water-stressed 1 ... 434 e-119
gb|CW306661.1|CW306661 104_792_11466961_148_35713_007 Sorgh... 432 e-119
gb|BE355445.1|BE355445 DG1_114_A03.b2_A002 Dark Grown 1 (DG... 432 e-119
gb|BF481909.1|BF481909 FM1_22_H04.g1_A003 Floral-Induced Me... 424 e-116
gb|BF656458.1|BF656458 FM1_50_B08.g1_A003 Floral-Induced Me... 424 e-116
gb|CL180079.1|CL180079 104_389_10895747_148_31907_275 Sorgh... 420 e-115
gb|CW048230.1|CW048230 104_286_10513235_114_30214 Sorghum m... 420 e-115
gb|CW182557.1|CW182557 104_598_11164141_116_36663_061 Sorgh... 416 e-114
gb|BE357369.1|BE357369 DG1_148_A05.g1_A002 Dark Grown 1 (DG... 416 e-114
gb|CD432572.1|CD432572 ETH1_30_E04.g1_A002 Ethylene-treated... 416 e-114
gb|CN125957.1|CN125957 RHOH1_14_H01.b1_A002 Acid- and alkal... 414 e-113
gb|CF071535.1|CF071535 FE1_17_C03.b1_A002 Iron-deficient se... 412 e-113
gb|CX607748.1|CX607748 ANR1_30_B07.g1_A002 Anaerobic roots ... 408 e-112
gb|AI723845.1|AI723845 RHIZ1_28_B06.y1_A001 Rhizome1 (RHIZ1... 394 e-107
gb|CW317075.1|CW317075 104_808_11473223_116_35851_084 Sorgh... 392 e-107
gb|BF482021.1|BF482021 FM1_22_H04.b1_A003 Floral-Induced Me... 392 e-107
gb|AI724242.1|AI724242 RHIZ1_8_B12.y2_A001 Rhizome1 (RHIZ1)... 391 e-106
gb|BG049237.1|BG049237 OV1_17_D01.g1_A002 Ovary 1 (OV1) Sor... 389 e-106
gb|BE599367.1|BE599367 PI1_88_F07.g1_A002 Pathogen induced ... 385 e-104
gb|CF071274.1|CF071274 FE1_16_D02.g1_A002 Iron-deficient se... 385 e-104
gb|BE592378.1|BE592378 WS1_94_A05.g1_A002 Water-stressed 1 ... 381 e-103
gb|CW361905.1|CW361905 fsbb001f030l13f0 Sorghum methylation... 379 e-103
gb|BG048803.1|BG048803 OV1_23_C04.b1_A002 Ovary 1 (OV1) Sor... 379 e-103
gb|CX607662.1|CX607662 ANR1_30_B07.b1_A002 Anaerobic roots ... 377 e-102
gb|CF072752.1|CF072752 FE1_25_E07.g1_A002 Iron-deficient se... 373 e-101
gb|CW112587.1|CW112587 104_486_11104970_116_34548_007 Sorgh... 369 e-100
gb|BE592516.1|BE592516 WS1_94_A05.b1_A002 Water-stressed 1 ... 369 e-100
gb|CF431835.1|CF431835 NIT1_9_B03.g1_A002 Nitrogen-deficien... 367 2e-099
gb|CW156116.1|CW156116 104_558_11146509_148_36368_081 Sorgh... 359 6e-097
gb|CW105327.1|CW105327 104_474_11012845_116_34450_053 Sorgh... 353 4e-095
gb|CW394994.1|CW394994 fsbb001f082n15f0 Sorghum methylation... 349 6e-094
gb|CF484983.1|CF484983 POL1_28_F02.g1_A002 Pollen Sorghum b... 349 6e-094
gb|CW070741.1|CW070741 104_322_10590964_114_30544 Sorghum m... 343 4e-092
gb|CF772707.1|CF772707 DSBF1_38_D05.g1_A010 Drought-stresse... 337 2e-090
gb|CW463246.1|CW463246 fsbb001f211m02f0 Sorghum methylation... 323 3e-086
gb|BG049096.1|BG049096 OV1_23_C04.g1_A002 Ovary 1 (OV1) Sor... 321 1e-085
gb|AW286565.1|AW286565 LG1_334_E01.g1_A002 Light Grown 1 (L... 315 8e-084
gb|CF074009.1|CF074009 FE1_9_D12.g1_A002 Iron-deficient see... 313 3e-083
gb|CW227263.1|CW227263 104_665_11205321_148_37224_037 Sorgh... 303 3e-080
gb|BG558204.1|BG558204 RHIZ2_64_D04.b1_A003 Rhizome2 (RHIZ2... 299 5e-079
gb|BF704815.1|BF704815 FM1_51_H04.b1_A003 Floral-Induced Me... 295 7e-078
gb|CN150769.1|CN150769 WOUND1_71_G11.b1_A002 Wounded leaves... 295 7e-078
gb|BG240054.1|BG240054 OV1_17_D01.b1_A002 Ovary 1 (OV1) Sor... 293 3e-077
gb|CW088567.1|CW088567 104_433_10948227_116_32575_006 Sorgh... 291 1e-076
gb|CL180078.1|CL180078 104_389_10895747_116_31908_275 Sorgh... 285 7e-075
gb|CW048231.1|CW048231 104_286_10513235_115_30215 Sorghum m... 285 7e-075
gb|CW120089.1|CW120089 104_497_11109126_116_34641_025 Sorgh... 285 7e-075
gb|CW493527.1|CW493527 fsbb001f284f10f0 Sorghum methylation... 285 7e-075
gb|CW498136.1|CW498136 fsbb001f291d19k0 Sorghum methylation... 285 7e-075
gb|AI724884.1|AI724884 RHIZ1_30_G03.y3_A001 Rhizome1 (RHIZ1... 281 1e-073
gb|BG052312.1|BG052312 RHIZ2_12_B05.b1_A003 Rhizome2 (RHIZ2... 281 1e-073
gb|BG102866.1|BG102866 RHIZ2_34_D04.b1_A003 Rhizome2 (RHIZ2... 281 1e-073
gb|CW432220.1|CW432220 fsbb001f146m24f0 Sorghum methylation... 280 4e-073
gb|CW306660.1|CW306660 104_792_11466961_116_35709_007 Sorgh... 278 2e-072
gb|CW182558.1|CW182558 104_598_11164141_148_36664_061 Sorgh... 272 1e-070
gb|CD431850.1|CD431850 ETH1_11_D10.g1_A002 Ethylene-treated... 266 7e-069
gb|AW677105.1|AW677105 DG1_4_H07.b1_A002 Dark Grown 1 (DG1)... 264 3e-068
gb|CW191310.1|CW191310 104_613_11178426_148_36941_075 Sorgh... 260 4e-067
gb|CW386731.1|CW386731 fsbb001f070m10k0 Sorghum methylation... 244 2e-062
gb|CW105328.1|CW105328 104_474_11012845_148_34446_053 Sorgh... 230 4e-058
gb|CW490111.1|CW490111 fsbb001f275g08k0 Sorghum methylation... 222 9e-056
gb|CL152063.1|CL152063 104_335_10779694_114_31363_094 Sorgh... 220 4e-055
gb|BF656582.1|BF656582 FM1_51_H04.g1_A003 Floral-Induced Me... 220 4e-055
gb|CF430869.1|CF430869 NIT1_1_E01.b1_A002 Nitrogen-deficien... 214 2e-053
gb|CL159717.1|CL159717 104_349_10804465_114_31381_289 Sorgh... 210 3e-052
gb|CW415400.1|CW415400 fsbb001f115h21f0 Sorghum methylation... 208 1e-051
gb|BG560769.1|BG560769 RHIZ2_64_D04.g1_A003 Rhizome2 (RHIZ2... 208 1e-051
gb|CW104944.1|CW104944 104_474_11012677_148_34448_061 Sorgh... 206 5e-051
gb|AI724525.1|AI724525 RHIZ1_37_E01.y1_A001 Rhizome1 (RHIZ1... 196 5e-048
gb|CW394995.1|CW394995 fsbb001f082n15k0 Sorghum methylation... 190 3e-046
gb|AI723852.1|AI723852 RHIZ1_28_C06.y1_A001 Rhizome1 (RHIZ1... 172 7e-041
gb|CW113300.1|CW113300 104_487_11105369_148_34551_071 Sorgh... 168 1e-039
gb|CW238284.1|CW238284 104_695_11216646_148_37417_029 Sorgh... 165 2e-038
gb|CW424980.1|CW424980 fsbb001f135j06f0 Sorghum methylation... 165 2e-038
gb|CW088569.1|CW088569 104_433_10948227_251_32621_006 Sorgh... 161 3e-037
gb|CW344083.1|CW344083 104_846_11487770_116_36196_005 Sorgh... 159 1e-036
gb|BE353104.1|BE353104 DG1_4_H07.g1_A002 Dark Grown 1 (DG1)... 157 4e-036
gb|CW070742.1|CW070742 104_322_10590964_116_30543 Sorghum m... 143 7e-032
gb|CW104943.1|CW104943 104_474_11012677_116_34452_061 Sorgh... 141 3e-031
gb|CF483259.1|CF483259 POL1_21_A09.b1_A002 Pollen Sorghum b... 123 6e-026
gb|CW415401.1|CW415401 fsbb001f115h21k0 Sorghum methylation... 96 1e-017
gb|CW049116.1|CW049116 104_288_10513836_114_30200 Sorghum m... 94 5e-017
gb|CW317076.1|CW317076 104_808_11473223_148_35855_084 Sorgh... 86 1e-014
gb|CW493528.1|CW493528 fsbb001f284f10k0 Sorghum methylation... 86 1e-014
gb|BE358843.1|BE358843 DG1_32_D03.g1_A002 Dark Grown 1 (DG1... 82 2e-013
gb|CW424981.1|CW424981 fsbb001f135j06k0 Sorghum methylation... 74 5e-011
gb|AW282719.1|AW282719 LG1_292_F12.g1_A002 Light Grown 1 (L... 66 1e-008
gb|CL179294.1|CL179294 104_388_10895213_148_31909_125 Sorgh... 64 5e-008
gb|CW206268.1|CW206268 104_634_11187502_148_36957_081 Sorgh... 62 2e-007
gb|CW310412.1|CW310412 104_799_11469701_116_37434_021 Sorgh... 62 2e-007
gb|CW502025.1|CW502025 fsbb001f298c13f0 Sorghum methylation... 62 2e-007
gb|BE599450.1|BE599450 PI1_87_F07.b1_A002 Pathogen induced ... 62 2e-007
gb|CB929035.1|CB929035 ABA1_38_E08.g1_A012 Abscisic acid-tr... 62 2e-007
gb|CD232045.1|CD232045 SS1_31_E02.g1_A012 Salt-stressed see... 62 2e-007
gb|CD429481.1|CD429481 ETH1_4_H11.g1_A002 Ethylene-treated ... 62 2e-007
gb|CF434162.1|CF434162 NIT1_32_H03.g1_A002 Nitrogen-deficie... 62 2e-007
gb|CX618572.1|CX618572 GABR1_40_H11.b1_A002 GA- or brassino... 62 2e-007
gb|CX618661.1|CX618661 GABR1_40_H11.g1_A002 GA- or brassino... 62 2e-007
gb|CW163311.1|CW163311 104_570_11151396_116_36452_034 Sorgh... 60 8e-007
gb|CW271002.1|CW271002 104_743_11402756_148_35343_080 Sorgh... 60 8e-007
gb|CN151138.1|CN151138 WOUND1_73_D06.g1_A002 Wounded leaves... 54 5e-005
gb|BZ334404.1|BZ334404 hx79b10.g1 WGS-SbicolorF (JM107 adap... 52 2e-004
gb|CW093545.1|CW093545 104_456_10999840_114_33066_052 Sorgh... 52 2e-004
gb|CW105329.1|CW105329 104_474_11012845_148_34479_053 Sorgh... 52 2e-004
gb|CW197068.1|CW197068 104_621_11181494_116_36824_059 Sorgh... 52 2e-004
gb|CW197069.1|CW197069 104_621_11181494_148_36823_059 Sorgh... 52 2e-004
gb|CW204619.1|CW204619 104_632_11186638_148_36923_085 Sorgh... 52 2e-004
gb|CW227292.1|CW227292 104_665_11205338_116_37230_005 Sorgh... 52 2e-004
gb|CW302430.1|CW302430 104_786_11464714_116_35663_037 Sorgh... 52 2e-004
gb|CW363855.1|CW363855 fsbb001f035k10f0 Sorghum methylation... 52 2e-004
gb|CW420212.1|CW420212 fsbb001f126g23f0 Sorghum methylation... 52 2e-004
gb|CW451874.1|CW451874 fsbb001f192c12k0 Sorghum methylation... 52 2e-004
gb|CW497504.1|CW497504 fsbb001f290e12f0 Sorghum methylation... 52 2e-004
gb|CD463110.1|CD463110 ETH1_42_F10.b1_A002 Ethylene-treated... 52 2e-004
gb|CD463130.1|CD463130 ETH1_42_F10.g1_A002 Ethylene-treated... 52 2e-004
gb|CN127949.1|CN127949 RHOH1_26_C09.b1_A002 Acid- and alkal... 52 2e-004
gb|CN128032.1|CN128032 RHOH1_26_C09.g1_A002 Acid- and alkal... 52 2e-004
gb|CN130340.1|CN130340 RHOH1_40_G09.g1_A002 Acid- and alkal... 52 2e-004
gb|CN135805.1|CN135805 OX1_39_C03.b1_A002 Oxidatively-stres... 52 2e-004
gb|CN135888.1|CN135888 OX1_39_C03.g1_A002 Oxidatively-stres... 52 2e-004
gb|BE357302.1|BE357302 DG1_148_A05.b1_A002 Dark Grown 1 (DG... 50 7e-004
gb|CD431824.1|CD431824 ETH1_11_A02.b1_A002 Ethylene-treated... 50 7e-004
gb|CL170389.1|CL170389 104_371_10813777_116_31791_097 Sorgh... 48 0.003
gb|CL186013.1|CL186013 104_400_10899928_116_32405_056 Sorgh... 48 0.003
gb|CW233439.1|CW233439 104_686_11213422_116_37376_085 Sorgh... 48 0.003
gb|CW252274.1|CW252274 104_715_11224407_116_35096_060 Sorgh... 48 0.003
gb|CW278768.1|CW278768 104_753_11406722_116_35426_009 Sorgh... 48 0.003
gb|BE358231.1|BE358231 DG1_26_E04.b2_A002 Dark Grown 1 (DG1... 48 0.003
gb|BZ341856.1|BZ341856 ic79b05.b1 WGS-SbicolorF (JM107 adap... 46 0.012
gb|CN151048.1|CN151048 WOUND1_73_D06.b1_A002 Wounded leaves... 46 0.012
gb|CW048930.1|CW048930 104_287_10513719_114_30211 Sorghum m... 44 0.045
gb|CW206267.1|CW206267 104_634_11187502_116_36958_081 Sorgh... 44 0.045
gb|CW310413.1|CW310413 104_799_11469701_148_37433_021 Sorgh... 44 0.045
gb|CW501270.1|CW501270 fsbb001f297a03f0 Sorghum methylation... 44 0.045
gb|CW501271.1|CW501271 fsbb001f297a03k0 Sorghum methylation... 44 0.045
gb|CW502026.1|CW502026 fsbb001f298c13k0 Sorghum methylation... 44 0.045
gb|BE599287.1|BE599287 PI1_87_F07.g1_A002 Pathogen induced ... 44 0.045
gb|CD231962.1|CD231962 SS1_31_E02.b1_A012 Salt-stressed see... 44 0.045
gb|CF482526.1|CF482526 POL1_7_B06.g1_A002 Pollen Sorghum bi... 44 0.045
gb|CL183572.1|CL183572 104_396_10898263_114_31923_103 Sorgh... 42 0.18
gb|CW072478.1|CW072478 104_325_10592288_114_30538 Sorghum m... 42 0.18
gb|CW073635.1|CW073635 104_337_10780742_114_31367_374 Sorgh... 42 0.18
gb|CW177011.1|CW177011 104_590_11158793_148_36595_077 Sorgh... 42 0.18
gb|CW225801.1|CW225801 104_663_11204551_148_37208_022 Sorgh... 42 0.18
gb|CW290675.1|CW290675 104_770_11413141_116_35761_063 Sorgh... 42 0.18
gb|CW342345.1|CW342345 104_844_11486823_116_36177_062 Sorgh... 42 0.18
gb|CW348620.1|CW348620 fsbb001f009b04f0 Sorghum methylation... 42 0.18
gb|CW350051.1|CW350051 fsbb001f011c22k0 Sorghum methylation... 42 0.18
gb|CW384592.1|CW384592 fsbb001f067l02f0 Sorghum methylation... 42 0.18
gb|CW384593.1|CW384593 fsbb001f067l02k0 Sorghum methylation... 42 0.18
gb|CW452981.1|CW452981 fsbb001f193m13f0 Sorghum methylation... 42 0.18
gb|BE125919.1|BE125919 DG1_59_F05.b1_A002 Dark Grown 1 (DG1... 42 0.18
gb|CD210742.1|CD210742 HS1_49_D06.g1_A012 Heat-shocked seed... 42 0.18
gb|CD210750.1|CD210750 HS1_49_A12.g1_A012 Heat-shocked seed... 42 0.18
gb|CD230534.1|CD230534 SS1_44_G02.g1_A012 Salt-stressed see... 42 0.18
gb|CD231647.1|CD231647 SS1_22_E10.g1_A012 Salt-stressed see... 42 0.18
gb|CD428924.1|CD428924 ETH1_1_F06.g1_A002 Ethylene-treated ... 42 0.18
gb|CF489022.1|CF489022 POL1_53_G06.g1_A002 Pollen Sorghum b... 42 0.18
>gb|CD213713.1|CD213713 HS1_52_G12.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_52_G12_A012 5', mRNA sequence
Length = 729
Score = 722 bits (364), Expect = 0.0
Identities = 462/494 (93%), Gaps = 3/494 (0%)
Strand = Plus / Plus
Query: 992 aaccccaactcgccccgcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaa 1051
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaccccagctcgcaccgcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaa 120
Query: 1052 gccggcggaggaggagcccgcggccgagaaggcgcccgccgggaagaagccgaaggcgga 1111
|| ||||||||||||||||||||| |||||| |||| |||||||||||||| ||||||||
Sbjct: 121 gctggcggaggaggagcccgcggcggagaagacgccggccgggaagaagcccaaggcgga 180
Query: 1112 gaagcgggtccccgctggcaagtccgctgccaaggagggcg---gcgagggcaagagggg 1168
|||||| ||||||||||||||||||| | ||||||||||| ||||||||||| ||||
Sbjct: 181 gaagcgtctccccgctggcaagtccgccggcaaggagggcggcggcgagggcaagcgggg 240
Query: 1169 caggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaa 1228
| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 241 ccggaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaa 300
Query: 1229 gcaggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcat 1288
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 301 gcaggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcat 360
Query: 1289 taacgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaa 1348
||||| ||||||||||||||||| || |||||||||||||||||||| || ||||||||
Sbjct: 361 caacgacatcttcgagaagctcgccgccgaggccgccaagctcgcgcggtacaacaagaa 420
Query: 1349 gcctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagct 1408
||| |||||||||||||| ||||||||||||||||| ||||||||||| ||||||| |||
Sbjct: 421 gcccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggggggct 480
Query: 1409 cgccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggc 1468
|||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 481 cgccaagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcgtcctaggc 540
Query: 1469 tgcgcggccgccgc 1482
||||||||||||||
Sbjct: 541 tgcgcggccgccgc 554
>gb|BZ341857.1|BZ341857 ic79b05.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ic79b05 5', DNA sequence
Length = 685
Score = 714 bits (360), Expect = 0.0
Identities = 461/494 (93%), Gaps = 3/494 (0%)
Strand = Plus / Minus
Query: 992 aaccccaactcgccccgcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaa 1051
||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 558 aaccccagctcgcaccgcatcgatggcgcccaaggccgagaagaaacccgcggcgaagaa 499
Query: 1052 gccggcggaggaggagcccgcggccgagaaggcgcccgccgggaagaagccgaaggcgga 1111
|| ||||||||||||||||||||||||||||||||| |||||||||||||| || |||||
Sbjct: 498 gctggcggaggaggagcccgcggccgagaaggcgccggccgggaagaagcccaaagcgga 439
Query: 1112 gaagcgggtccccgctggcaagtccgctgccaaggagggcggcg---agggcaagagggg 1168
|||||| | ||||||||||||||||| | |||||||||||||| |||||||| ||||
Sbjct: 438 gaagcgtctgcccgctggcaagtccgccggcaaggagggcggcggcgagggcaagcgggg 379
Query: 1169 caggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaa 1228
| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 378 ccggaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaa 319
Query: 1229 gcaggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcat 1288
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 318 gcaggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcat 259
Query: 1289 taacgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaa 1348
||||| ||||||||||||||||| || |||||||||||||||||||| || ||||||||
Sbjct: 258 caacgacatcttcgagaagctcgccgccgaggccgccaagctcgcgcggtacaacaagaa 199
Query: 1349 gcctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagct 1408
||| |||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 198 gcccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggggagct 139
Query: 1409 cgccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggc 1468
||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 138 cgcgaagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcgtcctaggc 79
Query: 1469 tgcgcggccgccgc 1482
||||||||||||||
Sbjct: 78 tgcgcggccgccgc 65
>gb|CW155043.1|CW155043 104_557_11145924_116_36362_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11145924, DNA
sequence
Length = 743
Score = 714 bits (360), Expect = 0.0
Identities = 461/494 (93%), Gaps = 3/494 (0%)
Strand = Plus / Plus
Query: 992 aaccccaactcgccccgcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaa 1051
||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 75 aaccccagctcgcaccgcatcgatggcgcccaaggccgagaagaaacccgcggcgaagaa 134
Query: 1052 gccggcggaggaggagcccgcggccgagaaggcgcccgccgggaagaagccgaaggcgga 1111
|| ||||||||||||||||||||||||||||||||| |||||||||||||| || |||||
Sbjct: 135 gctggcggaggaggagcccgcggccgagaaggcgccggccgggaagaagcccaaagcgga 194
Query: 1112 gaagcgggtccccgctggcaagtccgctgccaaggagggcggc---gagggcaagagggg 1168
|||||| | ||||||||||||||||| | ||||||||||||| ||||||||| ||||
Sbjct: 195 gaagcgtctgcccgctggcaagtccgccggcaaggagggcggcggcgagggcaagcgggg 254
Query: 1169 caggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaa 1228
| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 255 ccggaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaa 314
Query: 1229 gcaggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcat 1288
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 315 gcaggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcat 374
Query: 1289 taacgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaa 1348
||||| ||||||||||||||||| || |||||||||||||||||||| || ||||||||
Sbjct: 375 caacgacatcttcgagaagctcgccgccgaggccgccaagctcgcgcggtacaacaagaa 434
Query: 1349 gcctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagct 1408
||| |||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 435 gcccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggggagct 494
Query: 1409 cgccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggc 1468
||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 495 cgcgaagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcgtcctaggc 554
Query: 1469 tgcgcggccgccgc 1482
||||||||||||||
Sbjct: 555 tgcgcggccgccgc 568
>gb|CX606979.1|CX606979 ANR1_6_B05.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_B05_A002 3', mRNA sequence
Length = 665
Score = 714 bits (360), Expect = 0.0
Identities = 461/494 (93%), Gaps = 3/494 (0%)
Strand = Plus / Plus
Query: 992 aaccccaactcgccccgcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaa 1051
||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 32 aaccccagctcgcaccgcatcgatggcgcccaaggccgagaagaaacccgcggcgaagaa 91
Query: 1052 gccggcggaggaggagcccgcggccgagaaggcgcccgccgggaagaagccgaaggcgga 1111
|| ||||||||||||||||||||||||||||||||| |||||||||||||| || |||||
Sbjct: 92 gctggcggaggaggagcccgcggccgagaaggcgccggccgggaagaagcccaaagcgga 151
Query: 1112 gaagcgggtccccgctggcaagtccgctgccaaggagggcgg---cgagggcaagagggg 1168
|||||| | ||||||||||||||||| | |||||||||||| |||||||||| ||||
Sbjct: 152 gaagcgtctgcccgctggcaagtccgccggcaaggagggcggcggcgagggcaagcgggg 211
Query: 1169 caggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaa 1228
| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 212 ccggaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaa 271
Query: 1229 gcaggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcat 1288
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 272 gcaggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcat 331
Query: 1289 taacgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaa 1348
||||| ||||||||||||||||| || |||||||||||||||||||| || ||||||||
Sbjct: 332 caacgacatcttcgagaagctcgccgccgaggccgccaagctcgcgcggtacaacaagaa 391
Query: 1349 gcctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagct 1408
||| |||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 392 gcccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggggagct 451
Query: 1409 cgccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggc 1468
||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 452 cgcgaagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcgtcctaggc 511
Query: 1469 tgcgcggccgccgc 1482
||||||||||||||
Sbjct: 512 tgcgcggccgccgc 525
>gb|CX607063.1|CX607063 ANR1_6_B05.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_B05_A002 5', mRNA sequence
Length = 702
Score = 714 bits (360), Expect = 0.0
Identities = 461/494 (93%), Gaps = 3/494 (0%)
Strand = Plus / Plus
Query: 992 aaccccaactcgccccgcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaa 1051
||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 51 aaccccagctcgcaccgcatcgatggcgcccaaggccgagaagaaacccgcggcgaagaa 110
Query: 1052 gccggcggaggaggagcccgcggccgagaaggcgcccgccgggaagaagccgaaggcgga 1111
|| ||||||||||||||||||||||||||||||||| |||||||||||||| || |||||
Sbjct: 111 gctggcggaggaggagcccgcggccgagaaggcgccggccgggaagaagcccaaagcgga 170
Query: 1112 gaagcgggtccccgctggcaagtccgctgccaaggagggcggc---gagggcaagagggg 1168
|||||| | ||||||||||||||||| | ||||||||||||| ||||||||| ||||
Sbjct: 171 gaagcgtctgcccgctggcaagtccgccggcaaggagggcggcggcgagggcaagcgggg 230
Query: 1169 caggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaa 1228
| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 231 ccggaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaa 290
Query: 1229 gcaggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcat 1288
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 291 gcaggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcat 350
Query: 1289 taacgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaa 1348
||||| ||||||||||||||||| || |||||||||||||||||||| || ||||||||
Sbjct: 351 caacgacatcttcgagaagctcgccgccgaggccgccaagctcgcgcggtacaacaagaa 410
Query: 1349 gcctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagct 1408
||| |||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 411 gcccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggggagct 470
Query: 1409 cgccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggc 1468
||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 471 cgcgaagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcgtcctaggc 530
Query: 1469 tgcgcggccgccgc 1482
||||||||||||||
Sbjct: 531 tgcgcggccgccgc 544
>gb|CX610420.1|CX610420 ANR1_18_D02.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_18_D02_A002 5', mRNA sequence
Length = 711
Score = 714 bits (360), Expect = 0.0
Identities = 461/494 (93%), Gaps = 3/494 (0%)
Strand = Plus / Plus
Query: 992 aaccccaactcgccccgcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaa 1051
||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 50 aaccccagctcgcaccgcatcgatggcgcccaaggccgagaagaaacccgcggcgaagaa 109
Query: 1052 gccggcggaggaggagcccgcggccgagaaggcgcccgccgggaagaagccgaaggcgga 1111
|| ||||||||||||||||||||||||||||||||| |||||||||||||| || |||||
Sbjct: 110 gctggcggaggaggagcccgcggccgagaaggcgccggccgggaagaagcccaaagcgga 169
Query: 1112 gaagcgggtccccgctggcaagtccgctgccaaggagggcggcg---agggcaagagggg 1168
|||||| | ||||||||||||||||| | |||||||||||||| |||||||| ||||
Sbjct: 170 gaagcgtctgcccgctggcaagtccgccggcaaggagggcggcggcgagggcaagcgggg 229
Query: 1169 caggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaa 1228
| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 230 ccggaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaa 289
Query: 1229 gcaggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcat 1288
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 290 gcaggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcat 349
Query: 1289 taacgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaa 1348
||||| ||||||||||||||||| || |||||||||||||||||||| || ||||||||
Sbjct: 350 caacgacatcttcgagaagctcgccgccgaggccgccaagctcgcgcggtacaacaagaa 409
Query: 1349 gcctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagct 1408
||| |||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 410 gcccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggggagct 469
Query: 1409 cgccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggc 1468
||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 470 cgcgaagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcgtcctaggc 529
Query: 1469 tgcgcggccgccgc 1482
||||||||||||||
Sbjct: 530 tgcgcggccgccgc 543
>gb|CW410848.1|CW410848 fsbb001f105m09k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f105m09, DNA
sequence
Length = 598
Score = 706 bits (356), Expect = 0.0
Identities = 460/494 (93%), Gaps = 3/494 (0%)
Strand = Plus / Plus
Query: 992 aaccccaactcgccccgcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaa 1051
||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 50 aaccccagctcgcaccgcatcgatggcgcccaaggccgagaagaaacccgcggcgaagaa 109
Query: 1052 gccggcggaggaggagcccgcggccgagaaggcgcccgccgggaagaagccgaaggcgga 1111
|| ||||||||||||||||||||||||||||||||| |||||||||||||| || |||||
Sbjct: 110 gctggcggaggaggagcccgcggccgagaaggcgccggccgggaagaagcccaaagcgga 169
Query: 1112 gaagcgggtccccgctggcaagtccgctgccaaggagggcggcg---agggcaagagggg 1168
|||||| | ||||||||||||||||| | |||||||||||||| |||||||| ||||
Sbjct: 170 gaagcgtctgcccgctggcaagtccgccggcaaggagggcggcggcgagggcaagcgggg 229
Query: 1169 caggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaa 1228
| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 230 ccggaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaa 289
Query: 1229 gcaggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcat 1288
|||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||
Sbjct: 290 gcaggtgcacccggacatcggcatctcctccaagggcatgtccatcatgaactccttcat 349
Query: 1289 taacgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaa 1348
||||| ||||||||||||||||| || |||||||||||||||||||| || ||||||||
Sbjct: 350 caacgacatcttcgagaagctcgccgccgaggccgccaagctcgcgcggtacaacaagaa 409
Query: 1349 gcctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagct 1408
||| |||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 410 gcccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggggagct 469
Query: 1409 cgccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggc 1468
||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 470 cgcgaagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcgtcctaggc 529
Query: 1469 tgcgcggccgccgc 1482
||||||||||||||
Sbjct: 530 tgcgcggccgccgc 543
>gb|CD462726.1|CD462726 ETH1_39_B03.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_39_B03_A002 5', mRNA sequence
Length = 637
Score = 700 bits (353), Expect = 0.0
Identities = 461/495 (93%), Gaps = 4/495 (0%)
Strand = Plus / Plus
Query: 992 aaccccaactcgccccgcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaa 1051
||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 72 aaccccagctcgcaccgcatcgatggcgcccaaggccgagaagaaacccgcggcgaagaa 131
Query: 1052 gccggcggaggaggagcccgcggccgagaaggcgcccgccgggaagaagccgaaggcgga 1111
|| ||||||||||||||||||||||||||||||||| |||||||||||||| || |||||
Sbjct: 132 gctggcggaggaggagcccgcggccgagaaggcgccggccgggaagaagcccaaagcgga 191
Query: 1112 gaagcgggtccccgctggcaagtccgctgccaaggagggcggcg---agggcaagagggg 1168
|||||| | ||||||||||||||||| | |||||||||||||| |||||||| ||||
Sbjct: 192 gaagcgtctgcccgctggcaagtccgccggcaaggagggcggcggcgagggcaagcgggg 251
Query: 1169 caggaagaagggcaagaaga-gcgtggagacctacaagatctacatcttcaaggtgctga 1227
| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 252 ccggaagaagggcaagaagaagcgtggagacgtacaagatctacatcttcaaggtgctga 311
Query: 1228 agcaggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttca 1287
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 312 agcaggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttca 371
Query: 1288 ttaacgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaaga 1347
| ||||| ||||||||||||||||| || |||||||||||||||||||| || |||||||
Sbjct: 372 tcaacgacatcttcgagaagctcgccgccgaggccgccaagctcgcgcggtacaacaaga 431
Query: 1348 agcctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagc 1407
|||| |||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 432 agcccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggggagc 491
Query: 1408 tcgccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctagg 1467
|||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 492 tcgcgaagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcgtcctagg 551
Query: 1468 ctgcgcggccgccgc 1482
|||||||||||||||
Sbjct: 552 ctgcgcggccgccgc 566
>gb|BF480763.1|BF480763 FM1_14_F11.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 592
Score = 656 bits (331), Expect = 0.0
Identities = 420/449 (93%), Gaps = 3/449 (0%)
Strand = Plus / Plus
Query: 1038 cccgcggcgaagaagccggcggaggaggagcccgcggccgagaaggcgcccgccgggaag 1097
|||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 cccgcggcgaagaagctggcggaggaggagcccgcggccgagaaggcgccggccgggaag 60
Query: 1098 aagccgaaggcggagaagcgggtccccgctggcaagtccgctgccaaggagggcggc--- 1154
||||| |||||||||||||| ||||||||||||||||||| | |||||||||||||
Sbjct: 61 aagcccaaggcggagaagcgtctccccgctggcaagtccgccggcaaggagggcggcggc 120
Query: 1155 gagggcaagaggggcaggaagaagggcaagaagagcgtggagacctacaagatctacatc 1214
||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 121 gagggcaagcggggccggaagaagggcaagaagagcgtggagacgtacaagatctacatc 180
Query: 1215 ttcaaggtgctgaagcaggtgcacccggacattggcatctcctccaaggccatgtcgatc 1274
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 181 ttcaaggtgctgaagcaggtgcacccggacatcggcatctcctccaaggccatgtccatc 240
Query: 1275 atgaactccttcattaacgatatcttcgagaagctcgctgctgaggccgccaagctcgcg 1334
|||||||||||||| ||||| ||||||||||||||||| || ||||||||||||||||||
Sbjct: 241 atgaactccttcatcaacgacatcttcgagaagctcgccgccgaggccgccaagctcgcg 300
Query: 1335 cgctataacaagaagcctaccatcacctcccgtgagatccagacctccgtgcgcctcgtc 1394
|| || ||||||||||| |||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 301 cggtacaacaagaagcccaccatcacctcccgcgagatccagacctccgtccgcctcgtc 360
Query: 1395 cttcccggggagctcgccaagcacgccgtctccgagggcaccaaggccgtcaccaagttc 1454
|| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 361 ctccccggggagctcgcgaagcacgccgtctctgagggcaccaaggccgtcaccaagttc 420
Query: 1455 acctcggcctaggctgcgcggccgccgct 1483
|||||| ||||||||||||||||| ||||
Sbjct: 421 acctcgtcctaggctgcgcggccgtcgct 449
>gb|BF480894.1|BF480894 FM1_14_F11.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 507
Score = 650 bits (328), Expect = 0.0
Identities = 417/446 (93%), Gaps = 3/446 (0%)
Strand = Plus / Plus
Query: 992 aaccccaactcgccccgcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaa 1051
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aaccccagctcgctccgcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaa 121
Query: 1052 gccggcggaggaggagcccgcggccgagaaggcgcccgccgggaagaagccgaaggcgga 1111
|| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 122 gctggcggaggaggagcccgcggccgagaaggcgccggccgggaagaagcccaaggcgga 181
Query: 1112 gaagcgggtccccgctggcaagtccgctgccaaggagggcggcg---agggcaagagggg 1168
|||||| ||||||||||||||||||| | |||||||||||||| |||||||| ||||
Sbjct: 182 gaagcgtctccccgctggcaagtccgccggcaaggagggcggcggcgagggcaagcgggg 241
Query: 1169 caggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaa 1228
| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 242 ccggaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaa 301
Query: 1229 gcaggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcat 1288
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 302 gcaggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcat 361
Query: 1289 taacgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaa 1348
||||| ||||||||||||||||| || |||||||||||||||||||| || ||||||||
Sbjct: 362 caacgacatcttcgagaagctcgccgccgaggccgccaagctcgcgcggtacaacaagaa 421
Query: 1349 gcctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagct 1408
||| |||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 422 gcccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggggagct 481
Query: 1409 cgccaagcacgccgtctccgagggca 1434
||| |||||||||||||| |||||||
Sbjct: 482 cgcgaagcacgccgtctctgagggca 507
>gb|CL152064.1|CL152064 104_335_10779694_116_31364_094 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10779694, DNA
sequence
Length = 690
Score = 630 bits (318), Expect = e-178
Identities = 410/440 (93%), Gaps = 3/440 (0%)
Strand = Plus / Minus
Query: 1046 gaagaagccggcggaggaggagcccgcggccgagaaggcgcccgccgggaagaagccgaa 1105
|||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 690 gaagaagctggcggaggaggagcccgcggccgagaaggcgccggccgggaagaagcccaa 631
Query: 1106 ggcggagaagcgggtccccgctggcaagtccgctgccaaggagggcggcg---agggcaa 1162
||||||||||| | ||||||||||||||||| | |||||||||||||| |||||||
Sbjct: 630 agcggagaagcgtctgcccgctggcaagtccgccggcaaggagggcggcggcgagggcaa 571
Query: 1163 gaggggcaggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggt 1222
| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 570 gcggggccggaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggt 511
Query: 1223 gctgaagcaggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactc 1282
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 510 gctgaagcaggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactc 451
Query: 1283 cttcattaacgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataa 1342
|||||| ||||| ||||||||||||||||| || |||||||||||||||||||| || ||
Sbjct: 450 cttcatcaacgacatcttcgagaagctcgccgccgaggccgccaagctcgcgcggtacaa 391
Query: 1343 caagaagcctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccgg 1402
||||||||| |||||||||||||| ||||||||||||||||| ||||||||||| |||||
Sbjct: 390 caagaagcccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccgg 331
Query: 1403 ggagctcgccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggc 1462
||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 330 ggagctcgcgaagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcgtc 271
Query: 1463 ctaggctgcgcggccgccgc 1482
||||||||||||||||||||
Sbjct: 270 ctaggctgcgcggccgccgc 251
Score = 44.1 bits (22), Expect = 0.045
Identities = 64/78 (82%)
Strand = Plus / Minus
Query: 1566 tctgtagcaactgtgttatctgataggaccgtaatggtgcttattcaacccagctatatg 1625
||||||| ||||| |||||||||| | |||||||||||| || |||||||||| ||
Sbjct: 160 tctgtagtaactgcgttatctgatgtaatcgtaatggtgctagtttaacccagctacctg 101
Query: 1626 tttctatgtgaatcatct 1643
||| | |||| |||||||
Sbjct: 100 tttatttgtggatcatct 83
>gb|CD213618.1|CD213618 HS1_52_G12.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_52_G12_A012 3', mRNA sequence
Length = 611
Score = 573 bits (289), Expect = e-161
Identities = 369/395 (93%), Gaps = 3/395 (0%)
Strand = Plus / Plus
Query: 1091 cgggaagaagccgaaggcggagaagcgggtccccgctggcaagtccgctgccaaggaggg 1150
|||||||||||| |||||||||||||| ||||||||||||||||||| | |||||||||
Sbjct: 1 cgggaagaagcccaaggcggagaagcgtctccccgctggcaagtccgccggcaaggaggg 60
Query: 1151 cggcg---agggcaagaggggcaggaagaagggcaagaagagcgtggagacctacaagat 1207
||||| |||||||| ||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 61 cggcggcgagggcaagcggggccggaagaagggcaagaagagcgtggagacgtacaagat 120
Query: 1208 ctacatcttcaaggtgctgaagcaggtgcacccggacattggcatctcctccaaggccat 1267
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 121 ctacatcttcaaggtgctgaagcaggtgcacccggacatcggcatctcctccaaggccat 180
Query: 1268 gtcgatcatgaactccttcattaacgatatcttcgagaagctcgctgctgaggccgccaa 1327
||| ||||||||||||||||| ||||| ||||||||||||||||| || |||||||||||
Sbjct: 181 gtccatcatgaactccttcatcaacgacatcttcgagaagctcgccgccgaggccgccaa 240
Query: 1328 gctcgcgcgctataacaagaagcctaccatcacctcccgtgagatccagacctccgtgcg 1387
||||||||| || ||||||||||| |||||||||||||| ||||||||||||||||| ||
Sbjct: 241 gctcgcgcggtacaacaagaagcccaccatcacctcccgcgagatccagacctccgtccg 300
Query: 1388 cctcgtccttcccggggagctcgccaagcacgccgtctccgagggcaccaaggccgtcac 1447
||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 301 cctcgtcctccccggggggctcgccaagcacgccgtctctgagggcaccaaggccgtcac 360
Query: 1448 caagttcacctcggcctaggctgcgcggccgccgc 1482
||||||||||||| |||||||||||||||||||||
Sbjct: 361 caagttcacctcgtcctaggctgcgcggccgccgc 395
>gb|BE917707.1|BE917707 OV1_6_B04.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 554
Score = 571 bits (288), Expect = e-161
Identities = 416/460 (90%), Gaps = 9/460 (1%)
Strand = Plus / Plus
Query: 1010 atcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcc 1069
|||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 84 atcgatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcc 143
Query: 1070 cgcggccgagaaggcg---------cccgccgggaagaagccgaaggcggagaagcgggt 1120
|||||||||||||||| || || |||||||||||||||||||||||||| |
Sbjct: 144 cgcggccgagaaggcggagaagaccccggcggggaagaagccgaaggcggagaagcgcct 203
Query: 1121 ccccgctggcaagtccgctgccaaggagggcggcgagggcaagaggggcaggaagaaggg 1180
|||||| ||||||||| ||| ||| |||||||||||||| ||||| ||||||||
Sbjct: 204 ccccgcgggcaagtccagcgccggcaaggacggcgagggcaagaagggcaagaagaaggc 263
Query: 1181 caagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccc 1240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 264 caagaagagcgtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcaccc 323
Query: 1241 ggacattggcatctcctccaaggccatgtcgatcatgaactccttcattaacgatatctt 1300
|||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| |||||
Sbjct: 324 ggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatctt 383
Query: 1301 cgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcac 1360
|||||||||||| || ||| ||||||||||||| ||||| ||||||||||| ||||||||
Sbjct: 384 cgagaagctcgccgccgagtccgccaagctcgcccgctacaacaagaagcccaccatcac 443
Query: 1361 ctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcgccaagcacgc 1420
||||| ||||||||||| ||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 444 gtcccgagagatccagacttccgtccgcctcgtcctccccggggagctcgccaagcacgc 503
Query: 1421 cgtctccgagggcaccaaggccgtcaccaagttcacctcg 1460
||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cgtctccgagggcaccaaggccgtcaccaagttcacctcg 543
>gb|CW191309.1|CW191309 104_613_11178426_116_36942_075 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11178426, DNA
sequence
Length = 724
Score = 551 bits (278), Expect = e-155
Identities = 409/452 (90%), Gaps = 3/452 (0%)
Strand = Plus / Plus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
|||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||
Sbjct: 157 gcatcgatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggag 216
Query: 1068 cccgcggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgggtccccgct 1127
||||||||||||||||| || || ||||||||||| |||||||||||||| |||||||
Sbjct: 217 cccgcggccgagaaggccccggcggggaagaagcccaaggcggagaagcgcctccccgcg 276
Query: 1128 ggcaagtccgctgccaaggagggcggcgagggcaagaggggcaggaagaagggcaagaag 1187
|||||||| || | ||||||||||||||| ||||| ||||| |||||||| |||||||
Sbjct: 277 ggcaagtctgccggcaaggagggcggcga---caagaagggcaagaagaaggccaagaag 333
Query: 1188 agcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatt 1247
||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 334 tcggtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcaccccgacatc 393
Query: 1248 ggcatctcctccaaggccatgtcgatcatgaactccttcattaacgatatcttcgagaag 1307
||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||
Sbjct: 394 ggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaag 453
Query: 1308 ctcgctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcacctcccgt 1367
||||| | ||||||||||||||||| ||||| ||||||||||| |||||||||||| |
Sbjct: 454 ctcgccggcgaggccgccaagctcgcccgctacaacaagaagcccaccatcacctccagg 513
Query: 1368 gagatccagacctccgtgcgcctcgtccttcccggggagctcgccaagcacgccgtctcc 1427
||||||||||| || |||||||||||||| || || |||||||||||||||||||| |||
Sbjct: 514 gagatccagacgtcggtgcgcctcgtcctcccaggcgagctcgccaagcacgccgtgtcc 573
Query: 1428 gagggcaccaaggccgtcaccaagttcacctc 1459
||||||||||||||||| ||||||||||||||
Sbjct: 574 gagggcaccaaggccgttaccaagttcacctc 605
>gb|CW188377.1|CW188377 104_608_11172997_148_36734_061 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11172997, DNA
sequence
Length = 707
Score = 549 bits (277), Expect = e-154
Identities = 413/457 (90%), Gaps = 6/457 (1%)
Strand = Plus / Plus
Query: 1006 ccgcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagcc---ggcggagg 1062
||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct: 96 ccgcatcgatggctcccaaggcggagaagaagccggcggcgaagaagcccgcggcggagg 155
Query: 1063 aggagcccgcggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgggtcc 1122
|||||||||||||||||||||| || || ||||||||||| |||||||||||||| |||
Sbjct: 156 aggagcccgcggccgagaaggccccggcggggaagaagcccaaggcggagaagcgcctcc 215
Query: 1123 ccgctggcaagtccgctgccaaggagggcggcgagggcaagaggggcaggaagaagggca 1182
| || |||||||| || | |||||| |||||||| ||||| ||| | |||||||| ||
Sbjct: 216 cggcgggcaagtcggccggcaaggaaggcggcga---caagaaggggaagaagaaggcca 272
Query: 1183 agaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcacccgg 1242
||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 273 agaagtcggtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcaccctg 332
Query: 1243 acattggcatctcctccaaggccatgtcgatcatgaactccttcattaacgatatcttcg 1302
|||| ||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||
Sbjct: 333 acatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcg 392
Query: 1303 agaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcacct 1362
|||||||||| || ||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 393 agaagctcgccgccgaggccgccaagctcgcgcgctacaacaagaagcccaccatcacct 452
Query: 1363 cccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcgccaagcacgccg 1422
|| | ||||||||||| || |||||||||||||| ||||| |||||||||||||||||||
Sbjct: 453 ccagggagatccagacgtcggtgcgcctcgtcctccccggcgagctcgccaagcacgccg 512
Query: 1423 tctccgagggcaccaaggccgtcaccaagttcacctc 1459
|||||||||||||||||||||||||||||||||||||
Sbjct: 513 tctccgagggcaccaaggccgtcaccaagttcacctc 549
>gb|BE917630.1|BE917630 OV1_6_B04.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 493
Score = 543 bits (274), Expect = e-152
Identities = 416/462 (90%), Gaps = 11/462 (2%)
Strand = Plus / Plus
Query: 1010 atcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcc 1069
|||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 8 atcgatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcc 67
Query: 1070 cgcggccgagaaggcg---------cccgccgggaagaagccgaaggcggagaagcgggt 1120
|||||||||||||||| || || |||||||||||||||||||||||||| |
Sbjct: 68 cgcggccgagaaggcggagaagaccccggcggggaagaagccgaaggcggagaagcgcct 127
Query: 1121 ccccgctggcaagtccgctgccaaggagggcggcgagggcaagaggggcaggaagaaggg 1180
|||||| ||||||||| ||| ||| |||||||||||||| ||||| ||||||||
Sbjct: 128 ccccgcgggcaagtccagcgccggcaaggacggcgagggcaagaagggcaagaagaaggc 187
Query: 1181 caagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccc 1240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 188 caagaagagcgtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcaccc 247
Query: 1241 ggacattggcatctcctccaaggccatgtcgatcatgaactccttcattaacgatatctt 1300
|||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| |||||
Sbjct: 248 ggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatctt 307
Query: 1301 cgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcac 1360
|||||||||||| || ||| ||||||||||||| ||||| ||||||||||| ||||||||
Sbjct: 308 cgagaagctcgccgccgagtccgccaagctcgcccgctacaacaagaagcccaccatcac 367
Query: 1361 ctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcgccaagcacgc 1420
||||| ||||||||||| ||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 368 gtcccgagagatccagacttccgtccgcctcgtcctccccggggagctcgccaagcacgc 427
Query: 1421 cgtctc-cgagggc-accaaggccgtcaccaagttcacctcg 1460
|||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 428 cgtctcacgagggcaaccaaggccgtcaccaagttcacctcg 469
>gb|CW319235.1|CW319235 104_811_11474377_148_35884_003 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11474377, DNA
sequence
Length = 704
Score = 541 bits (273), Expect = e-152
Identities = 410/457 (89%), Gaps = 9/457 (1%)
Strand = Plus / Plus
Query: 1012 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccg 1071
||||||| |||||||| ||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 143 cgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccg 202
Query: 1072 cggccgagaaggcg---------cccgccgggaagaagccgaaggcggagaagcgggtcc 1122
|| ||||||||||| || || ||||||||||| ||||| ||||||||| |||
Sbjct: 203 cgaccgagaaggcggagaaggccccggcggggaagaagcccaaggccgagaagcggctcc 262
Query: 1123 ccgctggcaagtccgctgccaaggagggcggcgagggcaagaggggcaggaagaagggca 1182
|||| ||||||||||| | ||||||||||||||||||||||| ||| | |||||||| |
Sbjct: 263 ccgcgggcaagtccgccggcaaggagggcggcgagggcaagaaggggaagaagaaggcga 322
Query: 1183 agaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcacccgg 1242
||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 323 agaagtccgtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcacccgg 382
Query: 1243 acattggcatctcctccaaggccatgtcgatcatgaactccttcattaacgatatcttcg 1302
|||| |||||||| |||||||||||||| ||||||||||||||||| ||||| |||||||
Sbjct: 383 acatcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcg 442
Query: 1303 agaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcacct 1362
||||||| || || ||| |||||||||| |||||||| ||||||||||| ||||||||||
Sbjct: 443 agaagcttgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacct 502
Query: 1363 cccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcgccaagcacgccg 1422
|||| |||||||||||||| |||||||||||||| ||||| |||||||||||||||||||
Sbjct: 503 cccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccg 562
Query: 1423 tctccgagggcaccaaggccgtcaccaagttcacctc 1459
||||||||||||||||||| |||||||||||||||||
Sbjct: 563 tctccgagggcaccaaggctgtcaccaagttcacctc 599
>gb|CW417908.1|CW417908 fsbb001f121c05f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f121c05, DNA
sequence
Length = 812
Score = 541 bits (273), Expect = e-152
Identities = 410/457 (89%), Gaps = 9/457 (1%)
Strand = Plus / Plus
Query: 1012 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccg 1071
||||||| |||||||| ||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 93 cgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccg 152
Query: 1072 cggccgagaaggcg---------cccgccgggaagaagccgaaggcggagaagcgggtcc 1122
|| ||||||||||| || || ||||||||||| ||||| ||||||||| |||
Sbjct: 153 cgaccgagaaggcggagaaggccccggcggggaagaagcccaaggccgagaagcggctcc 212
Query: 1123 ccgctggcaagtccgctgccaaggagggcggcgagggcaagaggggcaggaagaagggca 1182
|||| ||||||||||| | ||||||||||||||||||||||| ||| | |||||||| |
Sbjct: 213 ccgcgggcaagtccgccggcaaggagggcggcgagggcaagaaggggaagaagaaggcga 272
Query: 1183 agaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcacccgg 1242
||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 273 agaagtccgtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcacccgg 332
Query: 1243 acattggcatctcctccaaggccatgtcgatcatgaactccttcattaacgatatcttcg 1302
|||| |||||||| |||||||||||||| ||||||||||||||||| ||||| |||||||
Sbjct: 333 acatcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcg 392
Query: 1303 agaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcacct 1362
||||||| || || ||| |||||||||| |||||||| ||||||||||| ||||||||||
Sbjct: 393 agaagcttgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacct 452
Query: 1363 cccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcgccaagcacgccg 1422
|||| |||||||||||||| |||||||||||||| ||||| |||||||||||||||||||
Sbjct: 453 cccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccg 512
Query: 1423 tctccgagggcaccaaggccgtcaccaagttcacctc 1459
||||||||||||||||||| |||||||||||||||||
Sbjct: 513 tctccgagggcaccaaggctgtcaccaagttcacctc 549
>gb|BE355360.1|BE355360 DG1_114_A03.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 526
Score = 541 bits (273), Expect = e-152
Identities = 410/457 (89%), Gaps = 9/457 (1%)
Strand = Plus / Plus
Query: 1012 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccg 1071
||||||| |||||||| ||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 63 cgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccg 122
Query: 1072 cggccgagaaggcg---------cccgccgggaagaagccgaaggcggagaagcgggtcc 1122
|| ||||||||||| || || ||||||||||| ||||| ||||||||| |||
Sbjct: 123 cgaccgagaaggcggagaaggccccggcggggaagaagcccaaggccgagaagcggctcc 182
Query: 1123 ccgctggcaagtccgctgccaaggagggcggcgagggcaagaggggcaggaagaagggca 1182
|||| ||||||||||| | ||||||||||||||||||||||| ||| | |||||||| |
Sbjct: 183 ccgcgggcaagtccgccggcaaggagggcggcgagggcaagaaggggaagaagaaggcga 242
Query: 1183 agaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcacccgg 1242
||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 243 agaagtccgtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcacccgg 302
Query: 1243 acattggcatctcctccaaggccatgtcgatcatgaactccttcattaacgatatcttcg 1302
|||| |||||||| |||||||||||||| ||||||||||||||||| ||||| |||||||
Sbjct: 303 acatcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcg 362
Query: 1303 agaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcacct 1362
||||||| || || ||| |||||||||| |||||||| ||||||||||| ||||||||||
Sbjct: 363 agaagcttgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacct 422
Query: 1363 cccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcgccaagcacgccg 1422
|||| |||||||||||||| |||||||||||||| ||||| |||||||||||||||||||
Sbjct: 423 cccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccg 482
Query: 1423 tctccgagggcaccaaggccgtcaccaagttcacctc 1459
||||||||||||||||||| |||||||||||||||||
Sbjct: 483 tctccgagggcaccaaggctgtcaccaagttcacctc 519
>gb|CW410847.1|CW410847 fsbb001f105m09f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f105m09, DNA
sequence
Length = 733
Score = 539 bits (272), Expect = e-151
Identities = 365/394 (92%), Gaps = 4/394 (1%)
Strand = Plus / Minus
Query: 1093 ggaagaagccgaaggcggagaagcgggtccccgctggcaagtccgctgccaaggagggcg 1152
|||||||||| || ||||||||||| | ||||||||||||||||| |||||||||||||
Sbjct: 733 ggaagaagcccaaagcggagaagcgtctgcccgctggcaagtccgccgccaaggagggcg 674
Query: 1153 gcg---agggcaagaggggcaggaagaagggcaagaagagcgtggagacctac-aagatc 1208
||| ||| |||| ||||| |||||||||||||||||||||||||||| ||| ||||||
Sbjct: 673 gcggcgaggccaagcggggccggaagaagggcaagaagagcgtggagacgtaccaagatc 614
Query: 1209 tacatcttcaaggtgctgaagcaggtgcacccggacattggcatctcctccaaggccatg 1268
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 613 tacatcttcaaggtgctgaagcaggtgcacccggacatcggcatctcctccaaggccatg 554
Query: 1269 tcgatcatgaactccttcattaacgatatcttcgagaagctcgctgctgaggccgccaag 1328
|| ||||||||||||||||| ||||| ||||||||||||||||| || ||||||||||||
Sbjct: 553 tccatcatgaactccttcatcaacgacatcttcgagaagctcgccgccgaggccgccaag 494
Query: 1329 ctcgcgcgctataacaagaagcctaccatcacctcccgtgagatccagacctccgtgcgc 1388
|||||||| || ||||||||||| |||||||||||||| ||||||||||||||||| |||
Sbjct: 493 ctcgcgcggtacaacaagaagcccaccatcacctcccgcgagatccagacctccgtccgc 434
Query: 1389 ctcgtccttcccggggagctcgccaagcacgccgtctccgagggcaccaaggccgtcacc 1448
|||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 433 ctcgtcctccccggggagctcgcgaagcacgccgtctctgagggcaccaaggccgtcacc 374
Query: 1449 aagttcacctcggcctaggctgcgcggccgccgc 1482
|||||||||||| |||||||||||||||||||||
Sbjct: 373 aagttcacctcgtcctaggctgcgcggccgccgc 340
Score = 44.1 bits (22), Expect = 0.045
Identities = 64/78 (82%)
Strand = Plus / Minus
Query: 1566 tctgtagcaactgtgttatctgataggaccgtaatggtgcttattcaacccagctatatg 1625
||||||| ||||| |||||||||| | |||||||||||| || |||||||||| ||
Sbjct: 249 tctgtagtaactgcgttatctgatgtaatcgtaatggtgctagtttaacccagctacctg 190
Query: 1626 tttctatgtgaatcatct 1643
||| | |||| |||||||
Sbjct: 189 tttatttgtggatcatct 172
>gb|BG488416.1|BG488416 RHIZ2_63_D10.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 556
Score = 535 bits (270), Expect = e-150
Identities = 409/455 (89%), Gaps = 9/455 (1%)
Strand = Plus / Plus
Query: 1012 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccg 1071
|||||||||||||||| ||||||||||| || ||||||||||| | |||||||||| |||
Sbjct: 81 cgatggcgcccaaggcggagaagaagccggcagcgaagaagcccgtggaggaggagtccg 140
Query: 1072 cggcc------gagaaggcgcccgccgggaagaagccgaaggcggagaagcgggtccccg 1125
||||| |||||||| ||||| ||||||||||| |||||||||||||| |||| |
Sbjct: 141 cggccccggcggagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccgg 200
Query: 1126 ctggcaagtccgctgccaaggagggcggcgagggcaagaggggcaggaagaagggcaaga 1185
| ||||||||||| |||||||||||||||| |||||||| |||||||||||||||
Sbjct: 201 cgggcaagtccgccagcaaggagggcggcgag---aagaggggtcggaagaagggcaaga 257
Query: 1186 agagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcacccggaca 1245
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 agagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggaca 317
Query: 1246 ttggcatctcctccaaggccatgtcgatcatgaactccttcattaacgatatcttcgaga 1305
| || |||||||||||||||||||| ||||||||||||||||| || || ||||||||||
Sbjct: 318 tcggtatctcctccaaggccatgtccatcatgaactccttcatcaatgacatcttcgaga 377
Query: 1306 agctcgctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcacctccc 1365
||||||| | ||||||||||||||||| ||||| ||||||||||| |||||||| || |
Sbjct: 378 agctcgccggcgaggccgccaagctcgcccgctacaacaagaagcccaccatcacttctc 437
Query: 1366 gtgagatccagacctccgtgcgcctcgtccttcccggggagctcgccaagcacgccgtct 1425
| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 438 gggagatccagacctccgtccgcctcgtcctccccggggagctcgccaagcacgccgtct 497
Query: 1426 ccgagggcaccaaggccgtcaccaagttcacctcg 1460
| |||||||||||||||||||||||||||||||||
Sbjct: 498 ctgagggcaccaaggccgtcaccaagttcacctcg 532
>gb|CW183462.1|CW183462 104_599_11164629_148_36672_089 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11164629, DNA
sequence
Length = 693
Score = 533 bits (269), Expect = e-149
Identities = 406/451 (90%), Gaps = 3/451 (0%)
Strand = Plus / Plus
Query: 1009 catcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagc 1068
|||| |||||||||||||| ||||||||||| |||||||||||||| |||||||||||||
Sbjct: 54 catccatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagc 113
Query: 1069 ccgcggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgggtccccgctg 1128
||||||||||||||||||| || ||||||||||| |||||||||||||| |||| || |
Sbjct: 114 ccgcggccgagaaggcgccggcggggaagaagcccaaggcggagaagcgcctcccggcgg 173
Query: 1129 gcaagtccgctgccaaggagggcggcgagggcaagaggggcaggaagaagggcaagaaga 1188
||||||| || | ||||||||| ||||| ||||| ||||| |||||||| ||||||
Sbjct: 174 gcaagtcggccggcaaggaggggggcga---caagaagggcaagaagaaggctaagaagt 230
Query: 1189 gcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcacccggacattg 1248
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |
Sbjct: 231 cggtggagacctacaagatctacatcttcaaggtgctgaagcaggtccaccccgacaccg 290
Query: 1249 gcatctcctccaaggccatgtcgatcatgaactccttcattaacgatatcttcgagaagc 1308
|||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||
Sbjct: 291 gcatctcctccaaggccatgtccatcatgaattccttcatcaacgatatcttcgagaagc 350
Query: 1309 tcgctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcacctcccgtg 1368
|||| | || |||||||||||||||||||| ||||| ||||| |||||||||||| | |
Sbjct: 351 tcgccggcgaagccgccaagctcgcgcgctacaacaaaaagcccaccatcacctccaggg 410
Query: 1369 agatccagacctccgtgcgcctcgtccttcccggggagctcgccaagcacgccgtctccg 1428
|||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 411 agatccagacctccgtccgcctcgtcctccccggcgagctcgccaagcacgccgtctccg 470
Query: 1429 agggcaccaaggccgtcaccaagttcacctc 1459
|||||||||||||||| ||||||||||||||
Sbjct: 471 agggcaccaaggccgttaccaagttcacctc 501
>gb|CD464058.1|CD464058 ETH1_48_H05.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_48_H05_A002 3', mRNA sequence
Length = 746
Score = 533 bits (269), Expect = e-149
Identities = 406/451 (90%), Gaps = 3/451 (0%)
Strand = Plus / Plus
Query: 1009 catcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagc 1068
|||| |||||||||||||| ||||||||||| |||||||||||||| |||||||||||||
Sbjct: 14 catccatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagc 73
Query: 1069 ccgcggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgggtccccgctg 1128
||||||||||||||||||| || ||||||||||| |||||||||||||| |||| || |
Sbjct: 74 ccgcggccgagaaggcgccggcggggaagaagcccaaggcggagaagcgcctcccggcgg 133
Query: 1129 gcaagtccgctgccaaggagggcggcgagggcaagaggggcaggaagaagggcaagaaga 1188
||||||| || | ||||||||| ||||| ||||| ||||| |||||||| ||||||
Sbjct: 134 gcaagtcggccggcaaggaggggggcga---caagaagggcaagaagaaggctaagaagt 190
Query: 1189 gcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcacccggacattg 1248
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |
Sbjct: 191 cggtggagacctacaagatctacatcttcaaggtgctgaagcaggtccaccccgacaccg 250
Query: 1249 gcatctcctccaaggccatgtcgatcatgaactccttcattaacgatatcttcgagaagc 1308
|||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||
Sbjct: 251 gcatctcctccaaggccatgtccatcatgaattccttcatcaacgatatcttcgagaagc 310
Query: 1309 tcgctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcacctcccgtg 1368
|||| | || |||||||||||||||||||| ||||| ||||| |||||||||||| | |
Sbjct: 311 tcgccggcgaagccgccaagctcgcgcgctacaacaaaaagcccaccatcacctccaggg 370
Query: 1369 agatccagacctccgtgcgcctcgtccttcccggggagctcgccaagcacgccgtctccg 1428
|||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 371 agatccagacctccgtccgcctcgtcctccccggcgagctcgccaagcacgccgtctccg 430
Query: 1429 agggcaccaaggccgtcaccaagttcacctc 1459
|||||||||||||||| ||||||||||||||
Sbjct: 431 agggcaccaaggccgttaccaagttcacctc 461
>gb|BG240440.1|BG240440 OV1_30_A12.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 555
Score = 527 bits (266), Expect = e-147
Identities = 408/455 (89%), Gaps = 9/455 (1%)
Strand = Plus / Plus
Query: 1012 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccg 1071
|||||||||||||||| ||||||||||| || ||||||||||| | ||||||||| |||
Sbjct: 75 cgatggcgcccaaggcggagaagaagccggcagcgaagaagcccgtggaggaggaatccg 134
Query: 1072 cggcc------gagaaggcgcccgccgggaagaagccgaaggcggagaagcgggtccccg 1125
||||| |||||| | ||||| ||||||||||| |||||||||||||| |||| |
Sbjct: 135 cggccccggcggagaagccccccgcggggaagaagcccaaggcggagaagcgtctcccgg 194
Query: 1126 ctggcaagtccgctgccaaggagggcggcgagggcaagaggggcaggaagaagggcaaga 1185
| ||||||||||| |||||||||||||||| |||||||| |||||||||||||||
Sbjct: 195 cgggcaagtccgccagcaaggagggcggcgag---aagaggggtcggaagaagggcaaga 251
Query: 1186 agagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcacccggaca 1245
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 agagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggaca 311
Query: 1246 ttggcatctcctccaaggccatgtcgatcatgaactccttcattaacgatatcttcgaga 1305
| ||||||||||||||||||||||| ||||||||||| ||||| ||||| ||||||||||
Sbjct: 312 tcggcatctcctccaaggccatgtccatcatgaactcgttcatcaacgacatcttcgaga 371
Query: 1306 agctcgctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcacctccc 1365
||||||| | ||||||||||||||||| ||||| ||||||||||| |||||||| || |
Sbjct: 372 agctcgccggcgaggccgccaagctcgcccgctacaacaagaagcccaccatcacttctc 431
Query: 1366 gtgagatccagacctccgtgcgcctcgtccttcccggggagctcgccaagcacgccgtct 1425
| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 432 gggagatccagacctccgtccgcctcgtcctccccggggagctcgccaagcacgccgtct 491
Query: 1426 ccgagggcaccaaggccgtcaccaagttcacctcg 1460
| |||||||||||||||||||||||||||||||||
Sbjct: 492 ctgagggcaccaaggccgtcaccaagttcacctcg 526
>gb|CW155044.1|CW155044 104_557_11145924_148_36361_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11145924, DNA
sequence
Length = 679
Score = 511 bits (258), Expect = e-143
Identities = 339/364 (93%), Gaps = 4/364 (1%)
Strand = Plus / Minus
Query: 1122 cccgctggcaagtccgctgccaaggagggcggcg---agggcaagaggggcaggaagaag 1178
||||||||||||||||| | |||||||||||||| ||| |||| ||||| | ||||||
Sbjct: 678 cccgctggcaagtccgccggcaaggagggcggcggcgaggtcaagcggggccg-aagaag 620
Query: 1179 ggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcac 1238
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcac 560
Query: 1239 ccggacattggcatctcctccaaggccatgtcgatcatgaactccttcattaacgatatc 1298
|||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| |||
Sbjct: 559 ccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatc 500
Query: 1299 ttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatc 1358
|||||||||||||| || |||||||||||||||||||| || ||||||||||| ||||||
Sbjct: 499 ttcgagaagctcgccgccgaggccgccaagctcgcgcggtacaacaagaagcccaccatc 440
Query: 1359 acctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcgccaagcac 1418
|||||||| ||||||||||||||||| ||||||||||| |||||||||||||| ||||||
Sbjct: 439 acctcccgcgagatccagacctccgtccgcctcgtcctccccggggagctcgcgaagcac 380
Query: 1419 gccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggctgcgcggccg 1478
|||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 379 gccgtctctgagggcaccaaggccgtcaccaagttcacctcgtcctaggctgcgcggccg 320
Query: 1479 ccgc 1482
||||
Sbjct: 319 ccgc 316
Score = 44.1 bits (22), Expect = 0.045
Identities = 64/78 (82%)
Strand = Plus / Minus
Query: 1566 tctgtagcaactgtgttatctgataggaccgtaatggtgcttattcaacccagctatatg 1625
||||||| ||||| |||||||||| | |||||||||||| || |||||||||| ||
Sbjct: 225 tctgtagtaactgcgttatctgatgtaatcgtaatggtgctagtttaacccagctacctg 166
Query: 1626 tttctatgtgaatcatct 1643
||| | |||| |||||||
Sbjct: 165 tttatttgtggatcatct 148
>gb|BF704683.1|BF704683 FM1_50_B08.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 563
Score = 504 bits (254), Expect = e-140
Identities = 399/446 (89%), Gaps = 6/446 (1%)
Strand = Plus / Plus
Query: 1012 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccg 1071
|||||||||||||||||||||||||||| |||| |||||||||||| | |||||| |
Sbjct: 80 cgatggcgcccaaggccgagaagaagccagcggagaagaagccggccgccgaggagaagg 139
Query: 1072 cggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgggtccccgctggca 1131
||| ||||||||||||| ||||||||||| ||||| |||||||| | ||||| ||
Sbjct: 140 cgg---agaaggcgcccgcagggaagaagcccaaggccgagaagcgcctgcccgcctcca 196
Query: 1132 agtccgctgccaaggagggcggcgagggcaagaggggcaggaagaagggcaagaagagcg 1191
||||| | | |||||||||||||||| |||| ||| | |||||||| |||||||||||
Sbjct: 197 agtcctccggcaaggagggcggcgag---aagaaggggaagaagaaggccaagaagagcg 253
Query: 1192 tggagacctacaagatctacatcttcaaggtgctgaagcaggtgcacccggacattggca 1251
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 254 tggagacctacaaaatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggca 313
Query: 1252 tctcctccaaggccatgtcgatcatgaactccttcattaacgatatcttcgagaagctcg 1311
||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 314 tctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctcg 373
Query: 1312 ctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcacctcccgtgaga 1371
| | |||||||||||||||||||| || ||||||||||| |||||||||||||| ||||
Sbjct: 374 ccggcgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgcgaga 433
Query: 1372 tccagacctccgtgcgcctcgtccttcccggggagctcgccaagcacgccgtctccgagg 1431
|||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 434 tccaaacctccgtgcgcctcgtcctccccggagagctcgccaagcacgccgtctccgagg 493
Query: 1432 gcaccaaggccgtcaccaagttcacc 1457
| ||||||||||||||||||||||||
Sbjct: 494 gaaccaaggccgtcaccaagttcacc 519
>gb|CW129063.1|CW129063 104_511_11114353_148_34760_015 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11114353, DNA
sequence
Length = 698
Score = 500 bits (252), Expect = e-139
Identities = 388/432 (89%), Gaps = 6/432 (1%)
Strand = Plus / Plus
Query: 1031 gaagaagcccgcggcgaagaagccggcggaggaggagcccgcggccgagaaggcgcccgc 1090
|||||||||||||| | || |||| ||||| ||| | | |||| |||||||| |||||
Sbjct: 205 gaagaagcccgcggaggaggagccctcggagaaggcggctccggcggagaaggcccccgc 264
Query: 1091 cgggaagaagccgaaggcggagaagcgggtccccgctggcaagtc---cgctgccaagga 1147
||||||||||| ||||||||||||||| |||| || |||||||| ||| | ||||||
Sbjct: 265 ggggaagaagcccaaggcggagaagcggctcccggcgggcaagtcgtccgccggcaagga 324
Query: 1148 gggcggcgagggcaagaggggcaggaagaagggcaagaagagcgtggagacctacaagat 1207
|||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gggcggcgag---aagaaggggaggaagaagggcaagaagagcgtggagacctacaagat 381
Query: 1208 ctacatcttcaaggtgctgaagcaggtgcacccggacattggcatctcctccaaggccat 1267
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 382 ctacatcttcaaggtcctgaagcaggtgcacccggacatcggcatctcctccaaggccat 441
Query: 1268 gtcgatcatgaactccttcattaacgatatcttcgagaagctcgctgctgaggccgccaa 1327
||| ||||||||||||||||| ||||| |||||||||||||| || || ||| |||||||
Sbjct: 442 gtccatcatgaactccttcatcaacgacatcttcgagaagctggccgcggagtccgccaa 501
Query: 1328 gctcgcgcgctataacaagaagcctaccatcacctcccgtgagatccagacctccgtgcg 1387
|||||| ||||| ||||||||||| ||||| |||||||| ||||||||||||||||| ||
Sbjct: 502 gctcgcccgctacaacaagaagcccaccattacctcccgcgagatccagacctccgtccg 561
Query: 1388 cctcgtccttcccggggagctcgccaagcacgccgtctccgagggcaccaaggccgtcac 1447
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 562 cctcgtcctccccggggagctcgccaagcacgccgtctccgagggtaccaaggccgtcac 621
Query: 1448 caagttcacctc 1459
||||||||||||
Sbjct: 622 caagttcacctc 633
Score = 93.7 bits (47), Expect = 5e-017
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
|||||||||||||||||||| ||||||||||| ||| |||||||||| ||||||||||||
Sbjct: 167 gcatcgatggcgcccaaggcagagaagaagccggcgtcgaagaagcccgcggaggaggag 226
Query: 1068 ccc 1070
|||
Sbjct: 227 ccc 229
>gb|AW680031.1|AW680031 WS1_34_A02.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 558
Score = 494 bits (249), Expect = e-137
Identities = 377/421 (89%), Gaps = 9/421 (2%)
Strand = Plus / Plus
Query: 1048 agaagccggcggaggaggagcccgcggccgagaaggcg---------cccgccgggaaga 1098
||||||| |||||||||||||||||| ||||||||||| || || |||||||
Sbjct: 1 agaagcccgcggaggaggagcccgcgaccgagaaggcggagaaggccccggcggggaaga 60
Query: 1099 agccgaaggcggagaagcgggtccccgctggcaagtccgctgccaaggagggcggcgagg 1158
|||| ||||| ||||||||| ||||||| ||||||||||| | |||||||||||||||||
Sbjct: 61 agcccaaggccgagaagcggctccccgcgggcaagtccgccggcaaggagggcggcgagg 120
Query: 1159 gcaagaggggcaggaagaagggcaagaagagcgtggagacctacaagatctacatcttca 1218
|||||| ||| | |||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 121 gcaagaaggggaagaagaaggcgaagaagtccgtggagacctacaagatctacatcttca 180
Query: 1219 aggtgctgaagcaggtgcacccggacattggcatctcctccaaggccatgtcgatcatga 1278
||||||| |||||||||||||||||||| |||||||| |||||||||||||| |||||||
Sbjct: 181 aggtgctcaagcaggtgcacccggacatcggcatctcgtccaaggccatgtccatcatga 240
Query: 1279 actccttcattaacgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgct 1338
|||||||||| ||||| |||||||||||||| || || ||| |||||||||| |||||||
Sbjct: 241 actccttcatcaacgacatcttcgagaagcttgcggccgagtccgccaagctggcgcgct 300
Query: 1339 ataacaagaagcctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttc 1398
| ||||||||||| |||||||||||||| |||||||||||||| |||||||||||||| |
Sbjct: 301 acaacaagaagcccaccatcacctcccgcgagatccagacctcggtgcgcctcgtcctcc 360
Query: 1399 ccggggagctcgccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacct 1458
|||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 361 ccggcgagctcgccaagcacgccgtctccgagggcaccaaggctgtcaccaagttcacct 420
Query: 1459 c 1459
|
Sbjct: 421 c 421
>gb|BG411209.1|BG411209 EM1_27_A01.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 498
Score = 492 bits (248), Expect = e-137
Identities = 382/428 (89%), Gaps = 9/428 (2%)
Strand = Plus / Plus
Query: 1012 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccg 1071
||||||| |||||||| ||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 71 cgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccg 130
Query: 1072 cggccgagaaggcg---------cccgccgggaagaagccgaaggcggagaagcgggtcc 1122
|| ||||||||||| || || ||||||||||| ||||| ||||||||| |||
Sbjct: 131 cgaccgagaaggcggagaaggccccggcggggaagaagcccaaggccgagaagcggctcc 190
Query: 1123 ccgctggcaagtccgctgccaaggagggcggcgagggcaagaggggcaggaagaagggca 1182
|||| ||||||||||| | ||||||||||||||||||||||| ||| | |||||||| |
Sbjct: 191 ccgcgggcaagtccgccggcaaggagggcggcgagggcaagaaggggaagaagaaggcga 250
Query: 1183 agaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcacccgg 1242
||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 251 agaagtccgtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcacccgg 310
Query: 1243 acattggcatctcctccaaggccatgtcgatcatgaactccttcattaacgatatcttcg 1302
|||| |||||||| |||||||||||||| ||||||||||||||||| ||||| |||||||
Sbjct: 311 acatcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcg 370
Query: 1303 agaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcacct 1362
||||||| || || ||| |||||||||| |||||||| ||||||||||| ||||||||||
Sbjct: 371 agaagcttgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacct 430
Query: 1363 cccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcgccaagcacgccg 1422
|||| |||||||||||||| |||||||||||||| ||||| |||||||||||||||||||
Sbjct: 431 cccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccg 490
Query: 1423 tctccgag 1430
||||||||
Sbjct: 491 tctccgag 498
>gb|CW128767.1|CW128767 104_510_11114194_148_34755_039 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11114194, DNA
sequence
Length = 652
Score = 490 bits (247), Expect = e-136
Identities = 354/389 (91%), Gaps = 3/389 (0%)
Strand = Plus / Minus
Query: 1072 cggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgggtccccgctggca 1131
|||| |||||| | ||||| ||||||||||| |||||||||||||| |||| || ||||
Sbjct: 583 cggcggagaagccccccgcggggaagaagcccaaggcggagaagcgtctcccggcgggca 524
Query: 1132 agtccgctgccaaggagggcggcgagggcaagaggggcaggaagaagggcaagaagagcg 1191
||||||| |||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 523 agtccgccagcaaggagggcggcgag---aagaggggtcggaagaagggcaagaagagcg 467
Query: 1192 tggagacctacaagatctacatcttcaaggtgctgaagcaggtgcacccggacattggca 1251
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 466 tggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcggca 407
Query: 1252 tctcctccaaggccatgtcgatcatgaactccttcattaacgatatcttcgagaagctcg 1311
||||||||||||||||||| ||||||||||| ||||| ||||| ||||||||||||||||
Sbjct: 406 tctcctccaaggccatgtccatcatgaactcgttcatcaacgacatcttcgagaagctcg 347
Query: 1312 ctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcacctcccgtgaga 1371
| | ||||||||||||||||| ||||| ||||||||||| |||||||| || || ||||
Sbjct: 346 ccggcgaggccgccaagctcgcccgctacaacaagaagcccaccatcacttctcgggaga 287
Query: 1372 tccagacctccgtgcgcctcgtccttcccggggagctcgccaagcacgccgtctccgagg 1431
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 286 tccagacctccgtccgcctcgtcctccccggggagctcgccaagcacgccgtctctgagg 227
Query: 1432 gcaccaaggccgtcaccaagttcacctcg 1460
|||||||||||||||||||||||||||||
Sbjct: 226 gcaccaaggccgtcaccaagttcacctcg 198
>gb|BE355526.1|BE355526 DG1_114_A03.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 662
Score = 490 bits (247), Expect = e-136
Identities = 349/383 (91%)
Strand = Plus / Plus
Query: 1077 gagaaggcgcccgccgggaagaagccgaaggcggagaagcgggtccccgctggcaagtcc 1136
|||||||| || || ||||||||||| ||||| ||||||||| ||||||| |||||||||
Sbjct: 33 gagaaggccccggcggggaagaagcccaaggccgagaagcggctccccgcgggcaagtcc 92
Query: 1137 gctgccaaggagggcggcgagggcaagaggggcaggaagaagggcaagaagagcgtggag 1196
|| | ||||||||||||||||||||||| ||| | |||||||| |||||| |||||||
Sbjct: 93 gccggcaaggagggcggcgagggcaagaaggggaagaagaaggcgaagaagtccgtggag 152
Query: 1197 acctacaagatctacatcttcaaggtgctgaagcaggtgcacccggacattggcatctcc 1256
||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 153 acctacaagatctacatcttcaaggtgctcaagcaggtgcacccggacatcggcatctcg 212
Query: 1257 tccaaggccatgtcgatcatgaactccttcattaacgatatcttcgagaagctcgctgct 1316
|||||||||||||| ||||||||||||||||| ||||| |||||||||||||| || ||
Sbjct: 213 tccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagcttgcggcc 272
Query: 1317 gaggccgccaagctcgcgcgctataacaagaagcctaccatcacctcccgtgagatccag 1376
||| |||||||||| |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 273 gagtccgccaagctggcgcgctacaacaagaagcccaccatcacctcccgcgagatccag 332
Query: 1377 acctccgtgcgcctcgtccttcccggggagctcgccaagcacgccgtctccgagggcacc 1436
||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 333 acctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgtctccgagggcacc 392
Query: 1437 aaggccgtcaccaagttcacctc 1459
||||| |||||||||||||||||
Sbjct: 393 aaggctgtcaccaagttcacctc 415
>gb|BG410872.1|BG410872 EM1_27_A01.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 537
Score = 490 bits (247), Expect = e-136
Identities = 349/383 (91%)
Strand = Plus / Plus
Query: 1077 gagaaggcgcccgccgggaagaagccgaaggcggagaagcgggtccccgctggcaagtcc 1136
|||||||| || || ||||||||||| ||||| ||||||||| ||||||| |||||||||
Sbjct: 5 gagaaggccccggcggggaagaagcccaaggccgagaagcggctccccgcgggcaagtcc 64
Query: 1137 gctgccaaggagggcggcgagggcaagaggggcaggaagaagggcaagaagagcgtggag 1196
|| | ||||||||||||||||||||||| ||| | |||||||| |||||| |||||||
Sbjct: 65 gccggcaaggagggcggcgagggcaagaaggggaagaagaaggcgaagaagtccgtggag 124
Query: 1197 acctacaagatctacatcttcaaggtgctgaagcaggtgcacccggacattggcatctcc 1256
||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 125 acctacaagatctacatcttcaaggtgctcaagcaggtgcacccggacatcggcatctcg 184
Query: 1257 tccaaggccatgtcgatcatgaactccttcattaacgatatcttcgagaagctcgctgct 1316
|||||||||||||| ||||||||||||||||| ||||| |||||||||||||| || ||
Sbjct: 185 tccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagcttgcggcc 244
Query: 1317 gaggccgccaagctcgcgcgctataacaagaagcctaccatcacctcccgtgagatccag 1376
||| |||||||||| |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 245 gagtccgccaagctggcgcgctacaacaagaagcccaccatcacctcccgcgagatccag 304
Query: 1377 acctccgtgcgcctcgtccttcccggggagctcgccaagcacgccgtctccgagggcacc 1436
||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 305 acctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgtctccgagggcacc 364
Query: 1437 aaggccgtcaccaagttcacctc 1459
||||| |||||||||||||||||
Sbjct: 365 aaggctgtcaccaagttcacctc 387
>gb|BG488106.1|BG488106 RHIZ2_63_D10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 514
Score = 490 bits (247), Expect = e-136
Identities = 354/389 (91%), Gaps = 3/389 (0%)
Strand = Plus / Plus
Query: 1072 cggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgggtccccgctggca 1131
|||| |||||||| ||||| ||||||||||| |||||||||||||| |||| || ||||
Sbjct: 19 cggcggagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccggcgggca 78
Query: 1132 agtccgctgccaaggagggcggcgagggcaagaggggcaggaagaagggcaagaagagcg 1191
||||||| |||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 79 agtccgccagcaaggagggcggcgag---aagaggggtcggaagaagggcaagaagagcg 135
Query: 1192 tggagacctacaagatctacatcttcaaggtgctgaagcaggtgcacccggacattggca 1251
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 136 tggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcggta 195
Query: 1252 tctcctccaaggccatgtcgatcatgaactccttcattaacgatatcttcgagaagctcg 1311
||||||||||||||||||| ||||||||||||||||| || || ||||||||||||||||
Sbjct: 196 tctcctccaaggccatgtccatcatgaactccttcatcaatgacatcttcgagaagctcg 255
Query: 1312 ctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcacctcccgtgaga 1371
| | ||||||||||||||||| ||||| ||||||||||| |||||||| || || ||||
Sbjct: 256 ccggcgaggccgccaagctcgcccgctacaacaagaagcccaccatcacttctcgggaga 315
Query: 1372 tccagacctccgtgcgcctcgtccttcccggggagctcgccaagcacgccgtctccgagg 1431
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 316 tccagacctccgtccgcctcgtcctccccggggagctcgccaagcacgccgtctctgagg 375
Query: 1432 gcaccaaggccgtcaccaagttcacctcg 1460
|||||||||||||||||||||||||||||
Sbjct: 376 gcaccaaggccgtcaccaagttcacctcg 404
>gb|AW745446.1|AW745446 WS1_34_A02.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 500
Score = 488 bits (246), Expect = e-135
Identities = 380/426 (89%), Gaps = 9/426 (2%)
Strand = Plus / Plus
Query: 1012 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccg 1071
||||||| |||||||| ||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 73 cgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccg 132
Query: 1072 cggccgagaaggcg---------cccgccgggaagaagccgaaggcggagaagcgggtcc 1122
|| ||||||||||| || || ||||||||||| ||||| ||||||||| |||
Sbjct: 133 cgaccgagaaggcggagaaggccccggcggggaagaagcccaaggccgagaagcggctcc 192
Query: 1123 ccgctggcaagtccgctgccaaggagggcggcgagggcaagaggggcaggaagaagggca 1182
|||| ||||||||||| | ||||||||||||||||||||||| ||| | |||||||| |
Sbjct: 193 ccgcgggcaagtccgccggcaaggagggcggcgagggcaagaaggggaagaagaaggcga 252
Query: 1183 agaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcacccgg 1242
||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 253 agaagtccgtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcacccgg 312
Query: 1243 acattggcatctcctccaaggccatgtcgatcatgaactccttcattaacgatatcttcg 1302
|||| |||||||| |||||||||||||| ||||||||||||||||| ||||| |||||||
Sbjct: 313 acatcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcg 372
Query: 1303 agaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcacct 1362
||||||| || || ||| |||||||||| |||||||| ||||||||||| ||||||||||
Sbjct: 373 agaagcttgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacct 432
Query: 1363 cccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcgccaagcacgccg 1422
|||| |||||||||||||| |||||||||||||| ||||| |||||||||||||||||||
Sbjct: 433 cccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccg 492
Query: 1423 tctccg 1428
||||||
Sbjct: 493 tctccg 498
>gb|AW564395.1|AW564395 LG1_292_F12.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 568
Score = 480 bits (242), Expect = e-133
Identities = 396/446 (88%), Gaps = 6/446 (1%)
Strand = Plus / Plus
Query: 1012 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccg 1071
|||||||||||||||||||||||||||| |||| |||||||||||| | |||||| |
Sbjct: 75 cgatggcgcccaaggccgagaagaagccagcggagaagaagccggccgccgaggagaagg 134
Query: 1072 cggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgggtccccgctggca 1131
||| ||||||||||||| || |||||||| ||||| |||||||| | ||||| ||
Sbjct: 135 cgg---agaaggcgcccgcaggaaagaagcccaaggccgagaagcgcctgcccgcctcca 191
Query: 1132 agtccgctgccaaggagggcggcgagggcaagaggggcaggaagaagggcaagaagagcg 1191
||||| | | ||||||||||||||| |||| ||| | |||||||| |||||||||||
Sbjct: 192 agtcctccggtaaggagggcggcgag---aagaaggggaagaagaaggccaagaagagcg 248
Query: 1192 tggagacctacaagatctacatcttcaaggtgctgaagcaggtgcacccggacattggca 1251
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 249 tggagacctacaaaatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggca 308
Query: 1252 tctcctccaaggccatgtcgatcatgaactccttcattaacgatatcttcgagaagctcg 1311
||||||||||||||||||| ||||||||||||||||| || || ||||||||||||||||
Sbjct: 309 tctcctccaaggccatgtccatcatgaactccttcatcaatgacatcttcgagaagctcg 368
Query: 1312 ctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcacctcccgtgaga 1371
| | |||||||||||||||||||| || ||||||||||| |||||||||||||| ||||
Sbjct: 369 ccggcgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgcgaga 428
Query: 1372 tccagacctccgtgcgcctcgtccttcccggggagctcgccaagcacgccgtctccgagg 1431
|||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 429 tccaaacctccgtgcgcctcgtcctccccggagagctcgccaagcacgccgtctccgagg 488
Query: 1432 gcaccaaggccgtcaccaagttcacc 1457
| ||||||||||||||||||||||||
Sbjct: 489 gaaccaaggccgtcaccaagttcacc 514
>gb|BE593143.1|BE593143 WS1_98_A10.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 596
Score = 480 bits (242), Expect = e-133
Identities = 396/446 (88%), Gaps = 6/446 (1%)
Strand = Plus / Plus
Query: 1012 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccg 1071
|||||||||||||||||||||||||||| |||| |||||||||||| | |||||| |
Sbjct: 21 cgatggcgcccaaggccgagaagaagccagcggagaagaagccggccgccgaggagaagg 80
Query: 1072 cggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgggtccccgctggca 1131
||| ||||||||||||| || |||||||| ||||| |||||||| | ||||| ||
Sbjct: 81 cgg---agaaggcgcccgcaggaaagaagcccaaggccgagaagcgcctgcccgcctcca 137
Query: 1132 agtccgctgccaaggagggcggcgagggcaagaggggcaggaagaagggcaagaagagcg 1191
||||| | | ||||||||||||||| |||| ||| | |||||||| |||||||||||
Sbjct: 138 agtcctccggtaaggagggcggcgag---aagaaggggaagaagaaggccaagaagagcg 194
Query: 1192 tggagacctacaagatctacatcttcaaggtgctgaagcaggtgcacccggacattggca 1251
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 195 tggagacctacaaaatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggca 254
Query: 1252 tctcctccaaggccatgtcgatcatgaactccttcattaacgatatcttcgagaagctcg 1311
||||||||||||||||||| ||||||||||||||||| || || ||||||||||||||||
Sbjct: 255 tctcctccaaggccatgtccatcatgaactccttcatcaatgacatcttcgagaagctcg 314
Query: 1312 ctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcacctcccgtgaga 1371
| | |||||||||||||||||||| || ||||||||||| |||||||||||||| ||||
Sbjct: 315 ccggcgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgcgaga 374
Query: 1372 tccagacctccgtgcgcctcgtccttcccggggagctcgccaagcacgccgtctccgagg 1431
|||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 375 tccaaacctccgtgcgcctcgtcctccccggagagctcgccaagcacgccgtctccgagg 434
Query: 1432 gcaccaaggccgtcaccaagttcacc 1457
| ||||||||||||||||||||||||
Sbjct: 435 gaaccaaggccgtcaccaagttcacc 460
>gb|CD431873.1|CD431873 ETH1_11_A02.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_11_A02_A002 5', mRNA sequence
Length = 667
Score = 480 bits (242), Expect = e-133
Identities = 396/446 (88%), Gaps = 6/446 (1%)
Strand = Plus / Plus
Query: 1012 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccg 1071
|||||||||||||||||||||||||||| |||| |||||||||||| | |||||| |
Sbjct: 99 cgatggcgcccaaggccgagaagaagccagcggagaagaagccggccgccgaggagaagg 158
Query: 1072 cggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgggtccccgctggca 1131
||| ||||||||||||| || |||||||| ||||| |||||||| | ||||| ||
Sbjct: 159 cgg---agaaggcgcccgcaggaaagaagcccaaggccgagaagcgcctgcccgcctcca 215
Query: 1132 agtccgctgccaaggagggcggcgagggcaagaggggcaggaagaagggcaagaagagcg 1191
||||| | | ||||||||||||||| |||| ||| | |||||||| |||||||||||
Sbjct: 216 agtcctccggtaaggagggcggcgag---aagaaggggaagaagaaggccaagaagagcg 272
Query: 1192 tggagacctacaagatctacatcttcaaggtgctgaagcaggtgcacccggacattggca 1251
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 273 tggagacctacaaaatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggca 332
Query: 1252 tctcctccaaggccatgtcgatcatgaactccttcattaacgatatcttcgagaagctcg 1311
||||||||||||||||||| ||||||||||||||||| || || ||||||||||||||||
Sbjct: 333 tctcctccaaggccatgtccatcatgaactccttcatcaatgacatcttcgagaagctcg 392
Query: 1312 ctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcacctcccgtgaga 1371
| | |||||||||||||||||||| || ||||||||||| |||||||||||||| ||||
Sbjct: 393 ccggcgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgcgaga 452
Query: 1372 tccagacctccgtgcgcctcgtccttcccggggagctcgccaagcacgccgtctccgagg 1431
|||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 453 tccaaacctccgtgcgcctcgtcctccccggagagctcgccaagcacgccgtctccgagg 512
Query: 1432 gcaccaaggccgtcaccaagttcacc 1457
| ||||||||||||||||||||||||
Sbjct: 513 gaaccaaggccgtcaccaagttcacc 538
>gb|CN150853.1|CN150853 WOUND1_71_G11.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_71_G11_A002 5', mRNA sequence
Length = 765
Score = 480 bits (242), Expect = e-133
Identities = 396/446 (88%), Gaps = 6/446 (1%)
Strand = Plus / Plus
Query: 1012 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccg 1071
|||||||||||||||||||||||||||| |||| |||||||||||| | |||||| |
Sbjct: 81 cgatggcgcccaaggccgagaagaagccagcggagaagaagccggccgccgaggagaagg 140
Query: 1072 cggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgggtccccgctggca 1131
||| ||||||||||||| || |||||||| ||||| |||||||| | ||||| ||
Sbjct: 141 cgg---agaaggcgcccgctggaaagaagcccaaggccgagaagcgcctgcccgcctcca 197
Query: 1132 agtccgctgccaaggagggcggcgagggcaagaggggcaggaagaagggcaagaagagcg 1191
||||| | | ||||||||||||||| |||| ||| | |||||||| |||||||||||
Sbjct: 198 agtcctccggtaaggagggcggcgag---aagaaggggaagaagaaggccaagaagagcg 254
Query: 1192 tggagacctacaagatctacatcttcaaggtgctgaagcaggtgcacccggacattggca 1251
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 255 tggagacctacaaaatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggca 314
Query: 1252 tctcctccaaggccatgtcgatcatgaactccttcattaacgatatcttcgagaagctcg 1311
||||||||||||||||||| ||||||||||||||||| || || ||||||||||||||||
Sbjct: 315 tctcctccaaggccatgtccatcatgaactccttcatcaatgacatcttcgagaagctcg 374
Query: 1312 ctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcacctcccgtgaga 1371
| | |||||||||||||||||||| || ||||||||||| |||||||||||||| ||||
Sbjct: 375 ccggcgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgcgaga 434
Query: 1372 tccagacctccgtgcgcctcgtccttcccggggagctcgccaagcacgccgtctccgagg 1431
|||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 435 tccaaacctccgtgcgcctcgtcctccccggagagctcgccaagcacgccgtctccgagg 494
Query: 1432 gcaccaaggccgtcaccaagttcacc 1457
| ||||||||||||||||||||||||
Sbjct: 495 gaaccaaggccgtcaccaagttcacc 520
>gb|BE599532.1|BE599532 PI1_88_F07.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 491
Score = 478 bits (241), Expect = e-133
Identities = 375/419 (89%), Gaps = 3/419 (0%)
Strand = Plus / Plus
Query: 1009 catcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagc 1068
|||| |||||||||||||| ||||||||||| |||||||||||||| |||||||||||||
Sbjct: 76 catccatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagc 135
Query: 1069 ccgcggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgggtccccgctg 1128
||||||||||||||||||| || ||||||||||| |||||||||||||| |||| || |
Sbjct: 136 ccgcggccgagaaggcgccggcggggaagaagcccaaggcggagaagcgcctcccggcgg 195
Query: 1129 gcaagtccgctgccaaggagggcggcgagggcaagaggggcaggaagaagggcaagaaga 1188
||||||| || | ||||||||| ||||| ||||| ||||| |||||||| ||||||
Sbjct: 196 gcaagtcggccggcaaggaggggggcga---caagaagggcaagaagaaggctaagaagt 252
Query: 1189 gcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcacccggacattg 1248
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |
Sbjct: 253 cggtggagacctacaagatctacatcttcaaggtgctgaagcaggtccaccccgacaccg 312
Query: 1249 gcatctcctccaaggccatgtcgatcatgaactccttcattaacgatatcttcgagaagc 1308
|||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||
Sbjct: 313 gcatctcctccaaggccatgtccatcatgaattccttcatcaacgatatcttcgagaagc 372
Query: 1309 tcgctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcacctcccgtg 1368
|||| | || |||||||||||||||||||| ||||| ||||| |||||||||||| | |
Sbjct: 373 tcgccggcgaagccgccaagctcgcgcgctacaacaaaaagcccaccatcacctccaggg 432
Query: 1369 agatccagacctccgtgcgcctcgtccttcccggggagctcgccaagcacgccgtctcc 1427
|||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 433 agatccagacctccgtccgcctcgtcctccccggcgagctcgccaagcacgccgtctcc 491
>gb|CN126047.1|CN126047 RHOH1_14_H01.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_14_H01_A002 5', mRNA sequence
Length = 770
Score = 472 bits (238), Expect = e-131
Identities = 395/446 (88%), Gaps = 6/446 (1%)
Strand = Plus / Plus
Query: 1012 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccg 1071
|||||||||||||||||||||||||||| |||| |||||||||||| | |||||| |
Sbjct: 81 cgatggcgcccaaggccgagaagaagccagcggagaagaagccggccgccgaggagaagg 140
Query: 1072 cggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgggtccccgctggca 1131
||| ||||||||||||| || |||||||| ||||| |||||||| | ||||| ||
Sbjct: 141 cgg---agaaggcgcccgcaggaaagaagcccaaggccgagaagcgcctgcccgcctcca 197
Query: 1132 agtccgctgccaaggagggcggcgagggcaagaggggcaggaagaagggcaagaagagcg 1191
||||| | | ||||||||||||||| |||| ||| | |||||||| |||||||||||
Sbjct: 198 agtcctccggtaaggagggcggcgag---aagaaggggaagaagaaggccaagaagagcg 254
Query: 1192 tggagacctacaagatctacatcttcaaggtgctgaagcaggtgcacccggacattggca 1251
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 255 tggagacctacaaaatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggca 314
Query: 1252 tctcctccaaggccatgtcgatcatgaactccttcattaacgatatcttcgagaagctcg 1311
||||||||||||||||||| ||||||||||||||||| || | ||||||||||||||||
Sbjct: 315 tctcctccaaggccatgtccatcatgaactccttcatcaatggcatcttcgagaagctcg 374
Query: 1312 ctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcacctcccgtgaga 1371
| | |||||||||||||||||||| || ||||||||||| |||||||||||||| ||||
Sbjct: 375 ccggcgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgcgaga 434
Query: 1372 tccagacctccgtgcgcctcgtccttcccggggagctcgccaagcacgccgtctccgagg 1431
|||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 435 tccaaacctccgtgcgcctcgtcctccccggagagctcgccaagcacgccgtctccgagg 494
Query: 1432 gcaccaaggccgtcaccaagttcacc 1457
| ||||||||||||||||||||||||
Sbjct: 495 gaaccaaggccgtcaccaagttcacc 520
>gb|CX608442.1|CX608442 ANR1_38_D08.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_38_D08_A002 5', mRNA sequence
Length = 635
Score = 472 bits (238), Expect = e-131
Identities = 395/446 (88%), Gaps = 6/446 (1%)
Strand = Plus / Plus
Query: 1012 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccg 1071
|||||||||||||||||||||||||||| |||| |||||||||||| | |||||| |
Sbjct: 73 cgatggcgcccaaggccgagaagaagccagcggagaagaagccggccgccgaggagaagg 132
Query: 1072 cggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgggtccccgctggca 1131
||| ||||||||||||| || |||||||| ||||| |||||||| | ||||| ||
Sbjct: 133 cgg---agaaggcgcccgcaggaaagaagcccaaggccgagaagcgcctgcccgcctcca 189
Query: 1132 agtccgctgccaaggagggcggcgagggcaagaggggcaggaagaagggcaagaagagcg 1191
||||| | | ||||||||||||||| |||| ||| | |||||||| |||||||||||
Sbjct: 190 agtcctccggtaaggagggcggcgag---aagaaggggaagaagaaggccaagaagagcg 246
Query: 1192 tggagacctacaagatctacatcttcaaggtgctgaagcaggtgcacccggacattggca 1251
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 247 tggagacctacaaaatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggca 306
Query: 1252 tctcctccaaggccatgtcgatcatgaactccttcattaacgatatcttcgagaagctcg 1311
||||||||||||||||||| |||||| |||||||||| || || ||||||||||||||||
Sbjct: 307 tctcctccaaggccatgtccatcatggactccttcatcaatgacatcttcgagaagctcg 366
Query: 1312 ctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcacctcccgtgaga 1371
| | |||||||||||||||||||| || ||||||||||| |||||||||||||| ||||
Sbjct: 367 ccggcgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgcgaga 426
Query: 1372 tccagacctccgtgcgcctcgtccttcccggggagctcgccaagcacgccgtctccgagg 1431
|||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 427 tccaaacctccgtgcgcctcgtcctccccggagagctcgccaagcacgccgtctccgagg 486
Query: 1432 gcaccaaggccgtcaccaagttcacc 1457
| ||||||||||||||||||||||||
Sbjct: 487 gaaccaaggccgtcaccaagttcacc 512
>gb|CW297850.1|CW297850 104_780_11462260_116_35647_012 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11462260, DNA
sequence
Length = 662
Score = 466 bits (235), Expect = e-129
Identities = 329/359 (91%), Gaps = 6/359 (1%)
Strand = Plus / Plus
Query: 1104 aaggcggagaagcgggtccccgctggcaagtc---cgctgccaaggagggcggcgagggc 1160
||||||||||||||| |||| || |||||||| ||| | ||||||||||||||||
Sbjct: 5 aaggcggagaagcggctcccggcgggcaagtcgtccgccggcaaggagggcggcgag--- 61
Query: 1161 aagaggggcaggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaag 1220
|||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aagaaggggaggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaag 121
Query: 1221 gtgctgaagcaggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaac 1280
|| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 122 gtcctgaagcaggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaac 181
Query: 1281 tccttcattaacgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctat 1340
|||||||| ||||| |||||||||||||| || || ||| ||||||||||||| |||||
Sbjct: 182 tccttcatcaacgacatcttcgagaagctggccgcggagtccgccaagctcgcccgctac 241
Query: 1341 aacaagaagcctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttccc 1400
||||||||||| ||||| |||||||| ||||||||||||||||| ||||||||||| |||
Sbjct: 242 aacaagaagcccaccattacctcccgcgagatccagacctccgtccgcctcgtcctcccc 301
Query: 1401 ggggagctcgccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctc 1459
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 302 ggggagctcgccaagcacgccgtctccgagggtaccaaggccgtcaccaagttcacctc 360
>gb|BG102543.1|BG102543 RHIZ2_34_D04.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 495
Score = 466 bits (235), Expect = e-129
Identities = 338/371 (91%), Gaps = 6/371 (1%)
Strand = Plus / Plus
Query: 1092 gggaagaagccgaaggcggagaagcgggtccccgctggcaagtc---cgctgccaaggag 1148
||||||||||| ||||||||||||||| |||| || |||||||| || | |||||||
Sbjct: 2 gggaagaagcccaaggcggagaagcggctcccggcgggcaagtcgtccgtcggcaaggag 61
Query: 1149 ggcggcgagggcaagaggggcaggaagaagggcaagaagagcgtggagacctacaagatc 1208
||||||||| |||| ||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 62 ggcggcgag---aagaaggggaggaagaaggggaagaagagcgtggagacctacaagatc 118
Query: 1209 tacatcttcaaggtgctgaagcaggtgcacccggacattggcatctcctccaaggccatg 1268
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 119 tacatcttcaaggtcctgaagcaggtgcacccggacatcggcatctcctccaaggccatg 178
Query: 1269 tcgatcatgaactccttcattaacgatatcttcgagaagctcgctgctgaggccgccaag 1328
|| ||||||||||||||||| ||||| |||||||||||||| || || ||| ||||||||
Sbjct: 179 tccatcatgaactccttcatcaacgacatcttcgagaagctggccgcggagtccgccaag 238
Query: 1329 ctcgcgcgctataacaagaagcctaccatcacctcccgtgagatccagacctccgtgcgc 1388
||||| ||||| ||||||||||| ||||| |||||||| ||||||||||||||||| |||
Sbjct: 239 ctcgcccgctacaacaagaagcccaccattacctcccgcgagatccagacctccgtccgc 298
Query: 1389 ctcgtccttcccggggagctcgccaagcacgccgtctccgagggcaccaaggccgtcacc 1448
|||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 299 ctcgtcctccccggggagctcgccaagcacgccgtctccgagggtaccaaggccgtcacc 358
Query: 1449 aagttcacctc 1459
|||||||||||
Sbjct: 359 aagttcacctc 369
>gb|AI724175.1|AI724175 RHIZ1_8_A04.y2_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 509
Score = 446 bits (225), Expect = e-123
Identities = 347/387 (89%), Gaps = 3/387 (0%)
Strand = Plus / Plus
Query: 1073 ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgggtccccgctggcaa 1132
|||||||||||| || || ||||||||||| |||||||||||||| |||| || |||||
Sbjct: 1 ggccgagaaggccccggcggggaagaagcccaaggcggagaagcgcctcccggcgggcaa 60
Query: 1133 gtccgctgccaaggagggcggcgagggcaagaggggcaggaagaagggcaagaagagcgt 1192
||| || | ||||||||||||||| ||||| ||||| |||||||| ||||||| ||
Sbjct: 61 gtcggccggcaaggagggcggcga---caagaagggcaagaagaaggccaagaagtcggt 117
Query: 1193 ggagacctacaagatctacatcttcaaggtgctgaagcaggtgcacccggacattggcat 1252
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 118 ggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcat 177
Query: 1253 ctcctccaaggccatgtcgatcatgaactccttcattaacgatatcttcgagaagctcgc 1312
|||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 178 ctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctcgc 237
Query: 1313 tgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcacctcccgtgagat 1372
| ||||||||||||||||| ||||| ||||||||||| |||||||||||| | |||||
Sbjct: 238 cggcgaggccgccaagctcgcccgctacaacaagaagcccaccatcacctccagggagat 297
Query: 1373 ccagacctccgtgcgcctcgtccttcccggggagctcgccaagcacgccgtctccgaggg 1432
|||||| || |||||||||||||| || || |||||||||||||||||||| ||||||||
Sbjct: 298 ccagacgtcggtgcgcctcgtcctcccaggcgagctcgccaagcacgccgtgtccgaggg 357
Query: 1433 caccaaggccgtcaccaagttcacctc 1459
|||||||||||| ||||||||||||||
Sbjct: 358 caccaaggccgttaccaagttcacctc 384
>gb|BG052252.1|BG052252 RHIZ2_12_B05.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 464
Score = 444 bits (224), Expect = e-122
Identities = 295/318 (92%), Gaps = 3/318 (0%)
Strand = Plus / Plus
Query: 1142 caaggagggcggcgagggcaagaggggcaggaagaagggcaagaagagcgtggagaccta 1201
|||||||||||||||| |||| ||| ||||||||||| ||||||||||||||||||||
Sbjct: 39 caaggagggcggcgag---aagaaggggaggaagaaggggaagaagagcgtggagaccta 95
Query: 1202 caagatctacatcttcaaggtgctgaagcaggtgcacccggacattggcatctcctccaa 1261
||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 96 caagatctacatcttcaaggtcctgaagcaggtgcacccggacatcggcatctcctccaa 155
Query: 1262 ggccatgtcgatcatgaactccttcattaacgatatcttcgagaagctcgctgctgaggc 1321
||||||||| ||||||||||||||||| ||||| |||||||||||||| || || ||| |
Sbjct: 156 ggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctggccgcggagtc 215
Query: 1322 cgccaagctcgcgcgctataacaagaagcctaccatcacctcccgtgagatccagacctc 1381
|||||||||||| ||||| ||||||||||| ||||| |||||||| ||||||||||||||
Sbjct: 216 cgccaagctcgcccgctacaacaagaagcccaccattacctcccgcgagatccagacctc 275
Query: 1382 cgtgcgcctcgtccttcccggggagctcgccaagcacgccgtctccgagggcaccaaggc 1441
||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 276 cgtccgcctcgtcctccccggggagctcgccaagcacgccgtctccgagggtaccaaggc 335
Query: 1442 cgtcaccaagttcacctc 1459
||||||||||||||||||
Sbjct: 336 cgtcaccaagttcacctc 353
>gb|CF431776.1|CF431776 NIT1_9_B03.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor cDNA
clone NIT1_9_B03_A002 3', mRNA sequence
Length = 474
Score = 440 bits (222), Expect = e-121
Identities = 267/282 (94%)
Strand = Plus / Plus
Query: 1201 acaagatctacatcttcaaggtgctgaagcaggtgcacccggacattggcatctcctcca 1260
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 acaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcggcatctcctcca 60
Query: 1261 aggccatgtcgatcatgaactccttcattaacgatatcttcgagaagctcgctgctgagg 1320
|||||||||| ||||||||||||||||| ||||| ||||||||||||||||| || ||||
Sbjct: 61 aggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctcgccgccgagg 120
Query: 1321 ccgccaagctcgcgcgctataacaagaagcctaccatcacctcccgtgagatccagacct 1380
|||||||||||||||| || ||||||||||| |||||||||||||| |||||||||||||
Sbjct: 121 ccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgcgagatccagacct 180
Query: 1381 ccgtgcgcctcgtccttcccggggagctcgccaagcacgccgtctccgagggcaccaagg 1440
|||| ||||||||||| |||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 181 ccgtccgcctcgtcctccccggggagctcgcgaagcacgccgtctctgagggcaccaagg 240
Query: 1441 ccgtcaccaagttcacctcggcctaggctgcgcggccgccgc 1482
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 241 ccgtcaccaagttcacctcgtcctaggctgcgcggccgccgc 282
Score = 44.1 bits (22), Expect = 0.045
Identities = 64/78 (82%)
Strand = Plus / Plus
Query: 1566 tctgtagcaactgtgttatctgataggaccgtaatggtgcttattcaacccagctatatg 1625
||||||| ||||| |||||||||| | |||||||||||| || |||||||||| ||
Sbjct: 373 tctgtagtaactgcgttatctgatgtaatcgtaatggtgctagtttaacccagctacctg 432
Query: 1626 tttctatgtgaatcatct 1643
||| | |||| |||||||
Sbjct: 433 tttatttgtggatcatct 450
>gb|CF489098.1|CF489098 POL1_54_H12.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_54_H12_A002 3', mRNA sequence
Length = 598
Score = 440 bits (222), Expect = e-121
Identities = 392/448 (87%), Gaps = 3/448 (0%)
Strand = Plus / Plus
Query: 397 acaccatcaacggccagaggttcccgctggagctgcacctggtccacaggagcgccgacg 456
|||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 1 acaccatcaacggccagaggttcccgctggagctccacctcgtccacaggagcgccgacg 60
Query: 457 gcgcgctggcggtcatcgggatcctctaccagctgggcgccccggactccttctactacc 516
|||| | || |||||||| |||||||||||||| |||||||| ||||| ||||||||||
Sbjct: 61 gcgccgtcgccgtcatcggcatcctctaccagctcggcgcccctgactctttctactacc 120
Query: 517 agctgaagcggcagctgggcgagatggcccaggaccggtgcgacttcgccgaggaggagg 576
|||||||| ||||||||| ||| ||||| ||||| |||| ||| | | ||||||||
Sbjct: 121 agctgaagaggcagctggtggaggtggccgaggacaagtgcaact---cggcggaggagg 177
Query: 577 agtcgcgggtggaggccggcctcatccacctgcgctcgctgcagaagcgcaccggcagct 636
|||||| |||||||| | || ||||||||||| ||||||||||||||||| || ||||
Sbjct: 178 agtcgcaggtggaggtggcgctgatccacctgcggtcgctgcagaagcgcacgggaagct 237
Query: 637 acttccgctacacgggctccctcaccgtgccgccatgcaccgagaacgtcgtctggagcg 696
||||||| |||||||| ||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 238 acttccggtacacggggtccctcaccgtgccgccctgcacagagaacgtcgtctggagcg 297
Query: 697 tcctcggcaaggtgcgccagatcagccaggaccagctgcagctgctcaaggcgccgctgc 756
| || || |||||| | ||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 298 tgctggggaaggtgaggcagatcagcaaggagcagctgcagctgctcaaggcgccgctgc 357
Query: 757 ccgggagcgacgcgcgccccacgcagccgctcaacggcaggaccgtccagttctacaacc 816
|||||| |||| |||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 358 ccgggaacgactaccgccccacgcagcccaccaacggcaggaaagtccagttctacaacc 417
Query: 817 cgcccaacagcaccatctccttccagat 844
|||| |||||||||||| ||||||||
Sbjct: 418 cgccaggcagcaccatctcattccagat 445
>gb|BE593453.1|BE593453 WS1_98_A10.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 487
Score = 434 bits (219), Expect = e-119
Identities = 370/419 (88%), Gaps = 6/419 (1%)
Strand = Plus / Plus
Query: 1012 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccg 1071
|||||||||||||||||||||||||||| |||| |||||||||||| | |||||| |
Sbjct: 75 cgatggcgcccaaggccgagaagaagccagcggagaagaagccggccgccgaggagaagg 134
Query: 1072 cggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgggtccccgctggca 1131
||| ||||||||||||| || |||||||| ||||| |||||||| | ||||| ||
Sbjct: 135 cgg---agaaggcgcccgcaggaaagaagcccaaggccgagaagcgcctgcccgcctcca 191
Query: 1132 agtccgctgccaaggagggcggcgagggcaagaggggcaggaagaagggcaagaagagcg 1191
||||| | | ||||||||||||||| |||| ||| | |||||||| |||||||||||
Sbjct: 192 agtcctccggtaaggagggcggcgag---aagaaggggaagaagaaggccaagaagagcg 248
Query: 1192 tggagacctacaagatctacatcttcaaggtgctgaagcaggtgcacccggacattggca 1251
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 249 tggagacctacaaaatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggca 308
Query: 1252 tctcctccaaggccatgtcgatcatgaactccttcattaacgatatcttcgagaagctcg 1311
||||||||||||||||||| ||||||||||||||||| || || ||||||||||||||||
Sbjct: 309 tctcctccaaggccatgtccatcatgaactccttcatcaatgacatcttcgagaagctcg 368
Query: 1312 ctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcacctcccgtgaga 1371
| | |||||||||||||||||||| || ||||||||||| |||||||||||||| ||||
Sbjct: 369 ccggcgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgcgaga 428
Query: 1372 tccagacctccgtgcgcctcgtccttcccggggagctcgccaagcacgccgtctccgag 1430
|||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 429 tccaaacctccgtgcgcctcgtcctccccggagagctcgccaagcacgccgtctccgag 487
>gb|CW306661.1|CW306661 104_792_11466961_148_35713_007 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11466961, DNA
sequence
Length = 711
Score = 432 bits (218), Expect = e-119
Identities = 269/286 (94%)
Strand = Plus / Plus
Query: 1175 gaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggt 1234
||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1 gaaggccaagaagagcgtggagacctacaagatctacatcttcaaggtgctcaagcaggt 60
Query: 1235 gcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcattaacga 1294
|||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 61 gcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacga 120
Query: 1295 tatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagcctac 1354
||||||||||||||||| || ||| ||||||||||||| ||||| ||||||||||| ||
Sbjct: 121 catcttcgagaagctcgccgccgagtccgccaagctcgcccgctacaacaagaagcccac 180
Query: 1355 catcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcgccaa 1414
|||||| ||||| ||||||||||| ||||| ||||||||||| |||||||||||||||||
Sbjct: 181 catcacgtcccgagagatccagacttccgtccgcctcgtcctccccggggagctcgccaa 240
Query: 1415 gcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcg 1460
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcg 286
>gb|BE355445.1|BE355445 DG1_114_A03.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 452
Score = 432 bits (218), Expect = e-119
Identities = 346/390 (88%), Gaps = 9/390 (2%)
Strand = Plus / Plus
Query: 1012 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccg 1071
||||||| |||||||| ||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 63 cgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccg 122
Query: 1072 cggccgagaaggcg---------cccgccgggaagaagccgaaggcggagaagcgggtcc 1122
|| ||||||||||| || || ||||||||||| ||||| ||||||||| |||
Sbjct: 123 cgaccgagaaggcggagaaggccccggcggggaagaagcccaaggccgagaagcggctcc 182
Query: 1123 ccgctggcaagtccgctgccaaggagggcggcgagggcaagaggggcaggaagaagggca 1182
|||| ||||||||||| | ||||||||||||||||||||||| ||| | |||||||| |
Sbjct: 183 ccgcgggcaagtccgccggcaaggagggcggcgagggcaagaaggggaagaagaaggcga 242
Query: 1183 agaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcacccgg 1242
||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 243 agaagtccgtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcacccgg 302
Query: 1243 acattggcatctcctccaaggccatgtcgatcatgaactccttcattaacgatatcttcg 1302
|||| |||||||| |||||||||||||| ||||||||||||||||| ||||| |||||||
Sbjct: 303 acatcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcg 362
Query: 1303 agaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcacct 1362
||||||| || || ||| |||||||||| |||||||| ||||||||||| ||||||||||
Sbjct: 363 agaagcttgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacct 422
Query: 1363 cccgtgagatccagacctccgtgcgcctcg 1392
|||| |||||||||||||| ||||||||||
Sbjct: 423 cccgcgagatccagacctcggtgcgcctcg 452
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 657,046
Number of Sequences: 832831
Number of extensions: 657046
Number of successful extensions: 211295
Number of sequences better than 0.5: 205
Number of HSP's better than 0.5 without gapping: 205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 210495
Number of HSP's gapped (non-prelim): 619
length of query: 1833
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1813
effective length of database: 474,703,049
effective search space: 860636627837
effective search space used: 860636627837
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)