BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.448
(911 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD430958.1|CD430958 ETH1_6_C07.b1_A002 Ethylene-treated ... 848 0.0
gb|CF483791.1|CF483791 POL1_24_E09.g1_A002 Pollen Sorghum b... 841 0.0
gb|CD431094.1|CD431094 ETH1_6_C07.g1_A002 Ethylene-treated ... 829 0.0
gb|CN133859.1|CN133859 OX1_18_F06.g1_A002 Oxidatively-stres... 827 0.0
gb|CX606886.1|CX606886 ANR1_5_B06.g1_A002 Anaerobic roots S... 819 0.0
gb|CF483714.1|CF483714 POL1_24_E09.b1_A002 Pollen Sorghum b... 815 0.0
gb|CX606795.1|CX606795 ANR1_5_B06.b1_A002 Anaerobic roots S... 803 0.0
gb|CN133776.1|CN133776 OX1_18_F06.b1_A002 Oxidatively-stres... 793 0.0
gb|CN148682.1|CN148682 WOUND1_58_D02.b1_A002 Wounded leaves... 771 0.0
gb|CF489005.1|CF489005 POL1_53_C12.g1_A002 Pollen Sorghum b... 763 0.0
gb|CF757496.1|CF757496 DSAF1_18_F09.g1_A011 Drought-stresse... 753 0.0
gb|BQ656110.1|BQ656110 pRC1098 Sorghum halepense rhizome cD... 741 0.0
gb|BE593970.1|BE593970 WS1_104_F03.g1_A002 Water-stressed 1... 729 0.0
gb|BE593990.1|BE593990 WS1_104_H03.g1_A002 Water-stressed 1... 726 0.0
gb|CD210076.1|CD210076 HS1_56_B01.g1_A012 Heat-shocked seed... 688 0.0
gb|BF480867.1|BF480867 FM1_14_C09.g1_A003 Floral-Induced Me... 648 0.0
gb|CD209978.1|CD209978 HS1_56_B01.b1_A012 Heat-shocked seed... 626 e-178
gb|BF480818.1|BF480818 FM1_14_C09.b1_A003 Floral-Induced Me... 615 e-174
gb|BF481836.1|BF481836 FM1_22_A06.g1_A003 Floral-Induced Me... 585 e-165
gb|CF481944.1|CF481944 POL1_75_G03.b1_A002 Pollen Sorghum b... 581 e-164
gb|BF481993.1|BF481993 FM1_22_A06.b1_A003 Floral-Induced Me... 569 e-160
gb|CW141478.1|CW141478 104_532_11136334_116_34935_089 Sorgh... 525 e-147
gb|CW476758.1|CW476758 fsbb001f233m02k0 Sorghum methylation... 525 e-147
gb|AW565437.1|AW565437 LG1_344_G07.g1_A002 Light Grown 1 (L... 517 e-145
gb|AW563755.1|AW563755 LG1_248_G12.g1_A002 Light Grown 1 (L... 511 e-143
gb|AW672010.1|AW672010 LG1_354_E09.b1_A002 Light Grown 1 (L... 511 e-143
gb|BE592601.1|BE592601 WS1_95_F01.b1_A002 Water-stressed 1 ... 511 e-143
gb|CF757003.1|CF757003 DSAF1_12_D10.g1_A011 Drought-stresse... 511 e-143
gb|CX606679.1|CX606679 ANR1_4_H06.b1_A002 Anaerobic roots S... 511 e-143
gb|CX606773.1|CX606773 ANR1_4_H06.g1_A002 Anaerobic roots S... 511 e-143
gb|DN552653.1|DN552653 pSHR-RT-MR-H1_A12_C142 pSHR Sorghum ... 504 e-141
gb|BE593837.1|BE593837 WS1_103_A01.g1_A002 Water-stressed 1... 496 e-138
gb|CW476757.1|CW476757 fsbb001f233m02f0 Sorghum methylation... 486 e-135
gb|BG356692.1|BG356692 OV2_26_G03.g1_A002 Ovary 2 (OV2) Sor... 470 e-130
gb|BE592729.1|BE592729 WS1_95_F01.g1_A002 Water-stressed 1 ... 448 e-124
gb|CF761682.1|CF761682 DSAF1_79_F02.b1_A011 Drought-stresse... 448 e-124
gb|BG159450.1|BG159450 OV2_8_C05.g1_A002 Ovary 2 (OV2) Sorg... 440 e-121
gb|BG464987.1|BG464987 EM1_34_G02.b1_A002 Embryo 1 (EM1) So... 438 e-121
gb|CF759036.1|CF759036 DSAF1_40_B08.b1_A011 Drought-stresse... 392 e-107
gb|AW285360.1|AW285360 LG1_244_D04.g1_A002 Light Grown 1 (L... 385 e-105
gb|CF772381.1|CF772381 DSBF1_34_C10.g1_A010 Drought-stresse... 385 e-105
gb|BG053794.1|BG053794 RHIZ2_9_H03.b1_A003 Rhizome2 (RHIZ2)... 357 1e-096
gb|BE594152.1|BE594152 WS1_103_A01.b1_A002 Water-stressed 1... 355 5e-096
gb|BQ656042.1|BQ656042 pRC0344 Sorghum halepense rhizome cD... 333 2e-089
gb|CF772635.1|CF772635 DSBF1_37_E06.g1_A010 Drought-stresse... 283 1e-074
gb|AI724510.1|AI724510 RHIZ1_37_B06.y1_A001 Rhizome1 (RHIZ1... 270 2e-070
gb|AW565980.1|AW565980 LG1_354_E09.g1_A002 Light Grown 1 (L... 270 2e-070
gb|BG053588.1|BG053588 RHIZ2_11_B10.g1_A003 Rhizome2 (RHIZ2... 252 5e-065
gb|CL197633.1|CL197633 104_424_10943868_116_32338_036 Sorgh... 244 1e-062
gb|CW246230.1|CW246230 104_707_11221254_148_35087_029 Sorgh... 244 1e-062
gb|CW285308.1|CW285308 104_762_11410262_116_35504_055 Sorgh... 236 3e-060
gb|CW246228.1|CW246228 104_707_11221254_116_35083_029 Sorgh... 228 7e-058
gb|BG053886.1|BG053886 RHIZ2_11_B10.b1_A003 Rhizome2 (RHIZ2... 161 1e-037
gb|CW029921.1|CW029921 104_257_10499952_114_30401 Sorghum m... 159 5e-037
gb|CW107572.1|CW107572 104_477_11096667_148_34472_002 Sorgh... 159 5e-037
gb|CW169777.1|CW169777 104_579_11154850_116_36506_033 Sorgh... 159 5e-037
gb|CW169899.1|CW169899 104_580_11154914_116_36512_013 Sorgh... 159 5e-037
gb|CW214124.1|CW214124 104_646_11193850_116_37049_047 Sorgh... 159 5e-037
gb|CW230230.1|CW230230 104_671_11207738_148_37266_001 Sorgh... 159 5e-037
gb|CW468548.1|CW468548 fsbb001f220m18f0 Sorghum methylation... 159 5e-037
gb|CW496453.1|CW496453 fsbb001f288l12f0 Sorghum methylation... 159 5e-037
gb|BZ781493.1|BZ781493 ii30a02.g1 WGS-SbicolorF (DH5a methy... 153 3e-035
gb|CL173970.1|CL173970 104_377_10891239_148_31792_375 Sorgh... 153 3e-035
gb|CW089548.1|CW089548 104_435_10948774_114_32612_095 Sorgh... 153 3e-035
gb|CW154611.1|CW154611 104_556_11145692_116_36354_068 Sorgh... 153 3e-035
gb|CW154612.1|CW154612 104_556_11145692_148_36353_068 Sorgh... 153 3e-035
gb|CW244794.1|CW244794 104_705_11220802_148_37591_033 Sorgh... 153 3e-035
gb|CW286289.1|CW286289 104_763_11410798_116_35512_081 Sorgh... 153 3e-035
gb|CD230975.1|CD230975 SS1_7_B05.b1_A012 Salt-stressed seed... 145 8e-033
gb|CW186439.1|CW186439 104_604_11166568_148_36711_058 Sorgh... 137 2e-030
gb|CW214125.1|CW214125 104_646_11193850_148_37053_047 Sorgh... 113 3e-023
gb|CL183381.1|CL183381 104_395_10898134_114_31917_358 Sorgh... 109 5e-022
gb|CL173969.1|CL173969 104_377_10891239_116_31793_375 Sorgh... 96 7e-018
gb|CW089549.1|CW089549 104_435_10948774_116_32613_095 Sorgh... 96 7e-018
gb|CW244793.1|CW244793 104_705_11220802_116_37592_033 Sorgh... 96 7e-018
gb|CL166028.1|CL166028 104_361_10809074_116_31821_290 Sorgh... 94 3e-017
gb|CW286290.1|CW286290 104_763_11410798_148_35645_081 Sorgh... 90 4e-016
gb|CL183382.1|CL183382 104_395_10898134_116_31918_358 Sorgh... 88 2e-015
gb|CW140199.1|CW140199 104_530_11135655_148_34918_054 Sorgh... 88 2e-015
gb|BE594316.1|BE594316 WS1_104_H03.b1_A002 Water-stressed 1... 86 7e-015
gb|CW395806.1|CW395806 fsbb001f083p22f0 Sorghum methylation... 80 4e-013
gb|CW032064.1|CW032064 104_260_10501160_114_30365 Sorghum m... 72 1e-010
gb|CW160978.1|CW160978 104_567_11150166_148_36508_019 Sorgh... 72 1e-010
gb|BE596516.1|BE596516 PI1_57_B11.b1_A002 Pathogen induced ... 72 1e-010
gb|CD223548.1|CD223548 CCC1_28_E04.g1_A007 Callus culture/c... 72 1e-010
gb|CD225779.1|CD225779 CCC1_41_D01.g1_A007 Callus culture/c... 72 1e-010
gb|CF488931.1|CF488931 POL1_53_C12.b1_A002 Pollen Sorghum b... 66 6e-009
gb|CD462876.1|CD462876 ETH1_40_D03.g2_A002 Ethylene-treated... 56 6e-006
gb|CL160730.1|CL160730 104_351_10805192_116_31825_248 Sorgh... 50 4e-004
gb|CN148759.1|CN148759 WOUND1_58_D02.g1_A002 Wounded leaves... 48 0.001
gb|CL160729.1|CL160729 104_351_10805192_114_31824_248 Sorgh... 46 0.006
gb|CL171959.1|CL171959 104_374_10889805_116_31775_093 Sorgh... 46 0.006
gb|CL182264.1|CL182264 104_393_10897310_116_31922_302 Sorgh... 46 0.006
gb|CW032065.1|CW032065 104_260_10501160_115_30366 Sorghum m... 46 0.006
gb|CW190026.1|CW190026 104_611_11174277_148_36746_087 Sorgh... 46 0.006
gb|CL179060.1|CL179060 104_387_10895026_116_31906_322 Sorgh... 40 0.35
gb|CW224367.1|CW224367 104_660_11203408_148_37445_054 Sorgh... 40 0.35
gb|CW366418.1|CW366418 fsbb001f039g16f0 Sorghum methylation... 40 0.35
>gb|CD430958.1|CD430958 ETH1_6_C07.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_6_C07_A002 3', mRNA sequence
Length = 662
Score = 848 bits (428), Expect = 0.0
Identities = 592/644 (91%), Gaps = 7/644 (1%)
Strand = Plus / Minus
Query: 189 taactcaaaaacttccaacaaaacagcataattgtgcaatgcttagctttgaattcttga 248
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 643 taactcacatacttccaacaaaacagcataattgtgcaatgcttagctttgaattctagg 584
Query: 249 gctggaatggaacaaaacaaaatatcttgggcatttaacttgttcaaaacaagtagaaaa 308
||||||| || |||||||| ||||||| || |||||||||||||||||||||||||
Sbjct: 583 gctggaa-----cagaacaaaatgtcttgggtatgtaacttgttcaaaacaagtagaaaa 529
Query: 309 gctgaacgaacattgccaactga-ctcttgggagactacagagccgggtaacagctcatt 367
|||||| ||||| ||||| |||| | ||||||| |||||||| | |||||||| ||||||
Sbjct: 528 gctgaaagaacaatgcca-ctgaacccttgggacactacagatctgggtaacaactcatt 470
Query: 368 tcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgaccg 427
|||| || ||||||||||| |||||||||||||||||||||||||| || |||||||| |
Sbjct: 469 tcagggggataaaccgcgacgagtgggtggcaccgataccgggcctaccgtgcttgactg 410
Query: 428 gcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctcaa 487
|||| ||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||
Sbjct: 409 gcttgtaggagatggagaactctgcaagatagtggccaatcatctcaggcttgatctcaa 350
Query: 488 cctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggacaa 547
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 349 cctggttgaaggtcttgccattgtagacaccaacaatgcttccaatcatctcagggacaa 290
Query: 548 tgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcct 607
|||||||||| |||||||| ||||| ||||||||||| ||||||||||| ||||||||||
Sbjct: 289 tgatcatgttgcggagatgggtcttcactggctctggcttctcaccagctggagcatcct 230
Query: 608 ttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgga 667
|||||||||||||||||||||||||||| ||||| || |||||||||| |||||||||||
Sbjct: 229 ttttcgccttgcgcagcttcttgatgagcgccatcggtttcctcttcaaacccctctgga 170
Query: 668 accttctcctggcgcgcgcggggaagagctggacgaggtcgtccgtggacatgtcgagaa 727
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 169 accttctcctggcgcgcgcggggaagagctggacgaggtcgtcggtggacatgtcgagca 110
Query: 728 gcgcatctaggtcgacgccgcggtagctgtacttgcggaacgtcctcttcttgggagcgc 787
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 gcgcatcaaggtcgacgccacggtagctgtacttgcggaacgtcctcttcttgggagcgc 50
Query: 788 cggcggcaacctccggttcgacatcgacgtccgccatgattgaa 831
||||||| ||||| || || |||||||||||||||||| |||||
Sbjct: 49 cggcggcgacctcaggctccacatcgacgtccgccatggttgaa 6
>gb|CF483791.1|CF483791 POL1_24_E09.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_24_E09_A002 5', mRNA sequence
Length = 700
Score = 841 bits (424), Expect = 0.0
Identities = 604/660 (91%), Gaps = 8/660 (1%)
Strand = Plus / Minus
Query: 205 aacaaaacagcataattgtgcaatgcttagctttgaattcttgagctggaatggaacaaa 264
||||||||||||||||||||||||||||||||||||||||| | ||||||| || |
Sbjct: 700 aacaaaacagcataattgtgcaatgcttagctttgaattctagggctggaa-----caga 646
Query: 265 acaaaatatcttgggcatttaacttgttcaaaacaagtagaaaagctgaacgaacattgc 324
||||||| ||||||| || ||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 645 acaaaatgtcttgggtatgtaacttgttcaaaacaagtagaaaagctgaaagaacaatgc 586
Query: 325 caactga-ctcttgggagactacagagccgggtaacagctcatttcagaggaataaaccg 383
|| |||| | ||||||| |||||||| | |||||||| ||||||||||||| ||||||||
Sbjct: 585 ca-ctgaacccttgggacactacagatctgggtaacaactcatttcagagggataaaccg 527
Query: 384 cgaggagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatgga 443
||| |||||||||||||||||||||||||| || |||||||| ||||| |||||||||||
Sbjct: 526 cgacgagtgggtggcaccgataccgggcctaccgtgcttgactggcttgtaggagatgga 467
Query: 444 gaactcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtctt 503
|||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gaactctgcaagatagtggccaatcatctcaggcttgatctcaacctggttgaaggtctt 407
Query: 504 gccgttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgttacggag 563
||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 406 gccattgtagacaccaacaatgcttccaatcatctcagggacaatgatcatgttgcggag 347
Query: 564 atgtgtcttgactggctctggtttctcaccagcaggagcatcctttttcgccttgcgcag 623
||| ||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 346 atgggtcttcactggctctggcttctcaccagctggagcatcctttttcgccttgcgcag 287
Query: 624 cttcttgatgagtgccatgggcttcctcttcagacccctctggaaccttctcctggcgcg 683
|||||||||||| ||||| || |||||||||| |||||||||||||||||||||||||||
Sbjct: 286 cttcttgatgagcgccatcggtttcctcttcaaacccctctggaaccttctcctggcgcg 227
Query: 684 cgcggggaagagctggacgaggtcgtccgtggacatgtcgagaagcgcatctaggtcgac 743
||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 226 cgcggggaagagctggacgaggtcgtcggtggacatgtcgagcagcgcatcgaggtcgac 167
Query: 744 gccgcggtagctgtacttgcggaacgtcctcttcttgggagcgccggcggcaacctccgg 803
||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 166 gccacggtagctgtacttgcggaacgtcctcttcttgggagcgccggcggcgacctcagg 107
Query: 804 ttcgacatcgacgtccgccatgattgaaagttgaaggtgatcgatgaggtcgcggtacgc 863
|| ||| |||||||||||||| ||| ||||||||| || ||| |||||||||| ||||
Sbjct: 106 ctccacaccgacgtccgccatggttg-aagttgaagctggtcggcgaggtcgcgggacgc 48
>gb|CD431094.1|CD431094 ETH1_6_C07.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_6_C07_A002 5', mRNA sequence
Length = 724
Score = 829 bits (418), Expect = 0.0
Identities = 604/662 (91%), Gaps = 8/662 (1%)
Strand = Plus / Minus
Query: 203 ccaacaaaacagcataattgtgcaatgcttagctttgaattcttgagctggaatggaaca 262
||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||
Sbjct: 724 ccaacaaaacagcataattgtgcaatgcttagctttgaattctagggctggaa-----ca 670
Query: 263 aaacaaaatatcttgggcatttaacttgttcaaaacaagtagaaaagctgaacgaacatt 322
|||||||| ||| ||| || ||||||||||||||||||||||||||||||| || || |
Sbjct: 669 gaacaaaatgtctggggtatgtaacttgttcaaaacaagtagaaaagctgaaagaccaat 610
Query: 323 gccaactga-ctcttgggagactacagagccgggtaacagctcatttcagaggaataaac 381
|||| |||| | ||||||| |||||||| | |||||||| |||||||||| || ||||||
Sbjct: 609 gcca-ctgaacccttgggacactacagatctgggtaacaactcatttcagggggataaac 551
Query: 382 cgcgaggagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatg 441
||||| |||||||||||||||||||||||||| || |||||||| ||||| |||||||||
Sbjct: 550 cgcgacgagtgggtggcaccgataccgggcctaccgtgcttgactggcttgtaggagatg 491
Query: 442 gagaactcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtc 501
|||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 490 gagaactctgcaagatagtggccaatcatctcaggcttgatctcaacctggttgaaggtc 431
Query: 502 ttgccgttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgttacgg 561
||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 430 ttgccattgtagacaccaacaatgcttccaatcatctcagggacaatgatcatgttgcgg 371
Query: 562 agatgtgtcttgactggctctggtttctcaccagcaggagcatcctttttcgccttgcgc 621
||||| ||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 370 agatgggtcttcactggctctggcttctcaccagctggagcatcctttttcgccttgcgc 311
Query: 622 agcttcttgatgagtgccatgggcttcctcttcagacccctctggaaccttctcctggcg 681
|||||||||||||| ||||| || |||||||||| |||||||||||||||||||||||||
Sbjct: 310 agcttcttgatgagcgccatcggtttcctcttcaaacccctctggaaccttctcctggcg 251
Query: 682 cgcgcggggaagagctggacgaggtcgtccgtggacatgtcgagaagcgcatctaggtcg 741
||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 250 cgcgcggggaagagctggacgaggtcgtcggtggacatgtcgagcagcgcatcaaggtcg 191
Query: 742 acgccgcggtagctgtacttgcggaacgtcctcttcttgggagcgccggcggcaacctcc 801
||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 190 acgccacggtagctgtacttgcggaacgtcctcttcttgggagcgccggcggcgacctca 131
Query: 802 ggttcgacatcgacgtccgccatgattgaaagttgaaggtgatcgatgaggtcgcggtac 861
|| || |||||||||||||||||| ||| ||||||||| || ||| |||||||||| ||
Sbjct: 130 ggctccacatcgacgtccgccatggttg-aagttgaagctggtcggcgaggtcgcgggac 72
Query: 862 gc 863
||
Sbjct: 71 gc 70
>gb|CN133859.1|CN133859 OX1_18_F06.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_18_F06_A002 5', mRNA sequence
Length = 749
Score = 827 bits (417), Expect = 0.0
Identities = 607/665 (91%), Gaps = 9/665 (1%)
Strand = Plus / Minus
Query: 201 ttccaacaaaac-agcataattgtgcaatgcttagctttgaattcttgagctggaatgga 259
|||||||||||| ||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 736 ttccaacaaaaccagcataattgtgcaatgcttagctttgaattctagggctggaa---- 681
Query: 260 acaaaacaaaatatcttgggcatttaacttgttcaaaacaagtagaaaagctgaacgaac 319
|| |||||||| ||||||| || ||||||||||||||||||||||||||||||| ||||
Sbjct: 680 -cagaacaaaatgtcttgggtatgtaacttgttcaaaacaagtagaaaagctgaaagaac 622
Query: 320 attgccaactga-ctcttgggagactacagagccgggtaacagctcatttcagaggaata 378
| ||||| |||| | ||||||| |||||||| | |||||||| ||||||||||||| |||
Sbjct: 621 aatgcca-ctgaacccttgggacactacagatctgggtaacaactcatttcagagggata 563
Query: 379 aaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggag 438
|||| ||| |||||||||||||||||||||||||| || |||||||| ||||| ||||||
Sbjct: 562 aaccacgacgagtgggtggcaccgataccgggcctaccgtgcttgactggcttgtaggag 503
Query: 439 atggagaactcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaag 498
||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 502 atggagaactctgcaagatagtggccaatcatctcaggcttgatctcaacctggttgaag 443
Query: 499 gtcttgccgttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtta 558
|||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gtcttgccattgtagacaccgacaatgcttccaatcatctcagggacaatgatcatgttg 383
Query: 559 cggagatgtgtcttgactggctctggtttctcaccagcaggagcatcctttttcgccttg 618
|||||||| ||||| ||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 382 cggagatgggtcttcactggctctggcttctcaccagctggagcatcctttttcgccttg 323
Query: 619 cgcagcttcttgatgagtgccatgggcttcctcttcagacccctctggaaccttctcctg 678
||||||||||||||||| ||||| || |||||||||| ||||||||||||||||||||||
Sbjct: 322 cgcagcttcttgatgagcgccatcggtttcctcttcaaacccctctggaaccttctcctg 263
Query: 679 gcgcgcgcggggaagagctggacgaggtcgtccgtggacatgtcgagaagcgcatctagg 738
|||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||
Sbjct: 262 gcgcgcgcggggaagagctggacgaggtcgtcggtggacatgtcgagcagcgcatcgagg 203
Query: 739 tcgacgccgcggtagctgtacttgcggaacgtcctcttcttgggagcgccggcggcaacc 798
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 202 tcgacgccacggtagctgtacttgcggaacgtcctcttcttgggagcgccggcggcgacc 143
Query: 799 tccggttcgacatcgacgtccgccatgattgaaagttgaaggtgatcgatgaggtcgcgg 858
|| || || |||||||||||||||||| ||| ||||||||| || ||| ||||||||||
Sbjct: 142 tcaggctccacatcgacgtccgccatggttg-aagttgaagctggtcggcgaggtcgcgg 84
Query: 859 tacgc 863
||||
Sbjct: 83 gacgc 79
>gb|CX606886.1|CX606886 ANR1_5_B06.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_5_B06_A002 5', mRNA sequence
Length = 703
Score = 819 bits (413), Expect = 0.0
Identities = 590/645 (91%), Gaps = 8/645 (1%)
Strand = Plus / Minus
Query: 220 ttgtgcaatgcttagctttgaattcttgagctggaatggaacaaaacaaaatatcttggg 279
|||||||||||||||||||||||||| | ||||||| || |||||||| |||||||
Sbjct: 687 ttgtgcaatgcttagctttgaattctagggctggaa-----cagaacaaaatgtcttggg 633
Query: 280 catttaacttgttcaaaacaagtagaaaagctgaacgaacattgccaactga-ctcttgg 338
|| ||||||||||||||||||||||||||||||| ||||| ||||| |||| | |||||
Sbjct: 632 tatgtaacttgttcaaaacaagtagaaaagctgaaagaacaatgcca-ctgaacccttgg 574
Query: 339 gagactacagagccgggtaacagctcatttcagaggaataaaccgcgaggagtgggtggc 398
|| |||||||| | |||||||| ||||||||||||| ||||||||||| |||||||||||
Sbjct: 573 gacactacagatctgggtaacaactcatttcagagggataaaccgcgacgagtgggtggc 514
Query: 399 accgataccgggcctgccatgcttgaccggcttataggagatggagaactcagcaaggta 458
||||||||||||||| || |||||||| ||||| ||||||||||||||||| ||||| ||
Sbjct: 513 accgataccgggcctaccgtgcttgactggcttgtaggagatggagaactctgcaagata 454
Query: 459 gtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccgttgtagacccc 518
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 453 gtggccaatcatctcaggcttgatctcaacctggttgaaggtcttgccattgtagacacc 394
Query: 519 aacaatgcttccaatcatctcagggacaatgatcatgttacggagatgtgtcttgactgg 578
||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||
Sbjct: 393 aacaatgcttccaatcatctcagggacaatgatcatgttgcggagatgggtcttcactgg 334
Query: 579 ctctggtttctcaccagcaggagcatcctttttcgccttgcgcagcttcttgatgagtgc 638
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 333 ctctggcttctcaccagctggagcatcctttttcgccttgcgcagcttcttgatgagcgc 274
Query: 639 catgggcttcctcttcagacccctctggaaccttctcctggcgcgcgcggggaagagctg 698
||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 catcggtttcctcttcaaacccctctggaaccttctcctggcgcgcgcggggaagagctg 214
Query: 699 gacgaggtcgtccgtggacatgtcgagaagcgcatctaggtcgacgccgcggtagctgta 758
|||||||||||| |||||||||||||| |||||||| ||||||||||| |||||||||||
Sbjct: 213 gacgaggtcgtcggtggacatgtcgagcagcgcatcgaggtcgacgccacggtagctgta 154
Query: 759 cttgcggaacgtcctcttcttgggagcgccggcggcaacctccggttcgacatcgacgtc 818
|||||||||||||||||||||||||||||||||||| ||||| || || |||||||||||
Sbjct: 153 cttgcggaacgtcctcttcttgggagcgccggcggcgacctcaggctccacatcgacgtc 94
Query: 819 cgccatgattgaaagttgaaggtgatcgatgaggtcgcggtacgc 863
||||||| ||| ||||||||| || ||| |||||||||| ||||
Sbjct: 93 cgccatggttg-aagttgaagctggtcggcgaggtcgcgggacgc 50
>gb|CF483714.1|CF483714 POL1_24_E09.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_24_E09_A002 3', mRNA sequence
Length = 589
Score = 815 bits (411), Expect = 0.0
Identities = 551/595 (92%), Gaps = 7/595 (1%)
Strand = Plus / Minus
Query: 200 cttccaacaaaacagcataattgtgcaatgcttagctttgaattcttgagctggaatgga 259
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 589 cttccaacaaaacagcataattgtgcaatgcttagctttgaattctagggctggaa---- 534
Query: 260 acaaaacaaaatatcttgggcatttaacttgttcaaaacaagtagaaaagctgaacgaac 319
|| |||||||| ||||||| || ||||||||||||||||||||||||||||||| ||||
Sbjct: 533 -cagaacaaaatgtcttgggtatgtaacttgttcaaaacaagtagaaaagctgaaagaac 475
Query: 320 attgccaactga-ctcttgggagactacagagccgggtaacagctcatttcagaggaata 378
| ||||| |||| | ||||||| |||||||| | |||||||| ||||||||||||| |||
Sbjct: 474 aatgcca-ctgaacccttgggacactacagatctgggtaacaactcatttcagagggata 416
Query: 379 aaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggag 438
|||||||| |||||||||||||||||||||||||| || |||||||| ||||| ||||||
Sbjct: 415 aaccgcgacgagtgggtggcaccgataccgggcctaccgtgcttgactggcttgtaggag 356
Query: 439 atggagaactcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaag 498
||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 355 atggagaactctgcaagatagtggccaatcatctcaggcttgatctcaacctggttgaag 296
Query: 499 gtcttgccgttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgtta 558
|||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gtcttgccattgtagacaccaacaatgcttccaatcatctcagggacaatgatcatgttg 236
Query: 559 cggagatgtgtcttgactggctctggtttctcaccagcaggagcatcctttttcgccttg 618
|||||||| ||||| ||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 235 cggagatgggtcttcactggctctggcttctcaccagctggagcatcctttttcgccttg 176
Query: 619 cgcagcttcttgatgagtgccatgggcttcctcttcagacccctctggaaccttctcctg 678
||||||||||||||||| ||||| || |||||||||| ||||||||||||||||||||||
Sbjct: 175 cgcagcttcttgatgagcgccatcggtttcctcttcaaacccctctggaaccttctcctg 116
Query: 679 gcgcgcgcggggaagagctggacgaggtcgtccgtggacatgtcgagaagcgcatctagg 738
|||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||
Sbjct: 115 gcgcgcgcggggaagagctggacgaggtcgtcggtggacatgtcgagcagcgcatcgagg 56
Query: 739 tcgacgccgcggtagctgtacttgcggaacgtcctcttcttgggagcgccggcgg 793
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 tcgacgccacggtagctgtacttgcggaacgtcctcttcttgggagcgccggcgg 1
>gb|CX606795.1|CX606795 ANR1_5_B06.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_5_B06_A002 3', mRNA sequence
Length = 662
Score = 803 bits (405), Expect = 0.0
Identities = 585/641 (91%), Gaps = 8/641 (1%)
Strand = Plus / Minus
Query: 224 gcaatgcttagctttgaattcttgagctggaatggaacaaaacaaaatatcttgggcatt 283
|||||||||||||||||||||| | ||||||| || |||||||| ||||||| ||
Sbjct: 662 gcaatgcttagctttgaattctagggctggaa-----cagaacaaaatgtcttgggtatg 608
Query: 284 taacttgttcaaaacaagtagaaaagctgaacgaacattgccaactga-ctcttgggaga 342
||||||||||||||||||||||||||||||| ||||| ||||| |||| | ||||||| |
Sbjct: 607 taacttgttcaaaacaagtagaaaagctgaaagaacaatgcca-ctgaacccttgggaca 549
Query: 343 ctacagagccgggtaacagctcatttcagaggaataaaccgcgaggagtgggtggcaccg 402
||||||| | |||||||| ||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 548 ctacagatctgggtaacaactcatttcagagggataaaccgcgacgagtgggtggcaccg 489
Query: 403 ataccgggcctgccatgcttgaccggcttataggagatggagaactcagcaaggtagtgg 462
||||||||||| || |||||||| ||||| ||||||||||||||||| ||||| ||||||
Sbjct: 488 ataccgggcctaccgtgcttgactggcttgtaggagatggagaactctgcaagatagtgg 429
Query: 463 ccgatcatctcaggcttgatctcaacctggttgaaggtcttgccgttgtagaccccaaca 522
|| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 428 ccaatcatctcaggcttgatctcaacctggttgaaggtcttgccattgtagacaccaaca 369
Query: 523 atgcttccaatcatctcagggacaatgatcatgttacggagatgtgtcttgactggctct 582
||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||
Sbjct: 368 atgcttccaatcatctcagggacaatgatcatgttgcggagatgggtcttcactggctct 309
Query: 583 ggtttctcaccagcaggagcatcctttttcgccttgcgcagcttcttgatgagtgccatg 642
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 308 ggcttctcaccagctggagcatcctttttcgccttgcgcagcttcttgatgagcgccatc 249
Query: 643 ggcttcctcttcagacccctctggaaccttctcctggcgcgcgcggggaagagctggacg 702
|| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 248 ggtttcctcttcaaacccctctggaaccttctcctggcgcgcgcggggaagaactggacg 189
Query: 703 aggtcgtccgtggacatgtcgagaagcgcatctaggtcgacgccgcggtagctgtacttg 762
|||||||| |||||||||||||| |||||||| ||||||||||| |||||||||||||||
Sbjct: 188 aggtcgtcggtggacatgtcgagcagcgcatcgaggtcgacgccacggtagctgtacttg 129
Query: 763 cggaacgtcctcttcttgggagcgccggcggcaacctccggttcgacatcgacgtccgcc 822
|||||||||||||||||||||||||||||||| ||||| || || |||||||||||||||
Sbjct: 128 cggaacgtcctcttcttgggagcgccggcggcgacctcaggctccacatcgacgtccgcc 69
Query: 823 atgattgaaagttgaaggtgatcgatgaggtcgcggtacgc 863
||| ||| ||||||||| || ||| |||||||||| ||||
Sbjct: 68 atggttg-aagttgaagctggtcggcgaggtcgcgggacgc 29
>gb|CN133776.1|CN133776 OX1_18_F06.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_18_F06_A002 3', mRNA sequence
Length = 603
Score = 793 bits (400), Expect = 0.0
Identities = 549/596 (92%), Gaps = 7/596 (1%)
Strand = Plus / Minus
Query: 206 acaaaacagcataattgtgcaatgcttagctttgaattcttgagctggaatggaacaaaa 265
|||||||||||||||||||||||||||||||||||||||| | ||||||| || ||
Sbjct: 601 acaaaacagcataattgtgcaatgcttagctttgaattctagggctggaa-----cagaa 547
Query: 266 caaaatatcttgggcatttaacttgttcaaaacaagtagaaaagctgaacgaacattgcc 325
|||||| ||||||| || ||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 546 caaaatgtcttgggtatgtaacttgttcaaaacaagtagaaaagctgaaagaacaatgcc 487
Query: 326 aactga-ctcttgggagactacagagccgggtaacagctcatttcagaggaataaaccgc 384
| |||| | ||||||| |||||||| | |||||||| ||||||||||||| ||||||| |
Sbjct: 486 a-ctgaacccttgggacactacagatctgggtaacaactcatttcagagggataaaccac 428
Query: 385 gaggagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggag 444
|| |||||||||||||||||||||||||| || |||||||| ||||| ||||||||||||
Sbjct: 427 gacgagtgggtggcaccgataccgggcctaccgtgcttgactggcttgtaggagatggag 368
Query: 445 aactcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttg 504
||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 367 aactctgcaagatagtggccaatcatctcaggcttgatctcaacctggttgaaggtcttg 308
Query: 505 ccgttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgttacggaga 564
|| |||||||| || |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 307 ccattgtagacaccgacaatgcttccaatcatctcagggacaatgatcatgttgcggaga 248
Query: 565 tgtgtcttgactggctctggtttctcaccagcaggagcatcctttttcgccttgcgcagc 624
|| ||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 247 tgggtcttcactggctctggcttctcaccagctggagcatcctttttcgccttgcgcagc 188
Query: 625 ttcttgatgagtgccatgggcttcctcttcagacccctctggaaccttctcctggcgcgc 684
||||||||||| ||||| || |||||||||| ||||||||||||||||||||||||||||
Sbjct: 187 ttcttgatgagcgccatcggtttcctcttcaaacccctctggaaccttctcctggcgcgc 128
Query: 685 gcggggaagagctggacgaggtcgtccgtggacatgtcgagaagcgcatctaggtcgacg 744
|||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||
Sbjct: 127 gcggggaagagctggacgaggtcgtcggtggacatgtcgagcagcgcatcgaggtcgacg 68
Query: 745 ccgcggtagctgtacttgcggaacgtcctcttcttgggagcgccggcggcaacctc 800
|| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 67 ccacggtagctgtacttgcggaacgtcctcttcttgggagcgccggcggcgacctc 12
>gb|CN148682.1|CN148682 WOUND1_58_D02.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_58_D02_A002 3', mRNA sequence
Length = 735
Score = 771 bits (389), Expect = 0.0
Identities = 533/581 (91%), Gaps = 5/581 (0%)
Strand = Plus / Minus
Query: 189 taactcaaaaacttccaacaaaacagcataattgtgcaatgcttagctttgaattcttga 248
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 726 taactcacatacttccaacaaaacagcataattgtgcaatgcttagctttgaattctagg 667
Query: 249 gctggaatggaacaaaacaaaatatcttgggcatttaacttgttcaaaacaagtagaaaa 308
||||||| || |||||||| ||||||| || |||||||||||||||||||||||||
Sbjct: 666 gctggaa-----cagaacaaaatgtcttgggtatgtaacttgttcaaaacaagtagaaaa 612
Query: 309 gctgaacgaacattgccaactgactcttgggagactacagagccgggtaacagctcattt 368
|||||| ||||| ||||| ||| ||||||| |||||||| | |||||||| |||||||
Sbjct: 611 gctgaaagaacaatgccactggacccttgggacactacagatctgggtaacaactcattt 552
Query: 369 cagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgaccgg 428
|||||| ||||||||||| |||||||||||||||||||||||||| || |||||||| ||
Sbjct: 551 cagagggataaaccgcgacgagtgggtggcaccgataccgggcctaccgtgcttgactgg 492
Query: 429 cttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctcaac 488
||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 491 cttgtaggagatggagaactctgcaaggtagtggccaatcatctcaggcttgatctcaac 432
Query: 489 ctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggacaat 548
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 431 ctggttgaaggtcttgccattgtagacaccaacaatgcttccaatcatctcagggacaat 372
Query: 549 gatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcctt 608
||||||||| |||||||| ||||| ||||||||||| ||||||||||| |||||||||||
Sbjct: 371 gatcatgttgcggagatgggtcttcactggctctggcttctcaccagctggagcatcctt 312
Query: 609 tttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctggaa 668
||||||||||||||||||||||||||| ||||| || |||||||||| ||||||||||||
Sbjct: 311 tttcgccttgcgcagcttcttgatgagcgccatcggtttcctcttcaaacccctctggaa 252
Query: 669 ccttctcctggcgcgcgcggggaagagctggacgaggtcgtccgtggacatgtcgagaag 728
|||||||||||||||||||||||| |||||||||||||| || |||||||||||||| ||
Sbjct: 251 ccttctcctggcgcgcgcggggaaaagctggacgaggtcctcggtggacatgtcgagcag 192
Query: 729 cgcatctaggtcgacgccgcggtagctgtacttgcggaacg 769
|||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 191 cgcatcgaggtcgacgccacggtagctgtacttgcggaacg 151
>gb|CF489005.1|CF489005 POL1_53_C12.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_53_C12_A002 5', mRNA sequence
Length = 635
Score = 763 bits (385), Expect = 0.0
Identities = 532/577 (92%), Gaps = 3/577 (0%)
Strand = Plus / Plus
Query: 256 tggaacaaaacaaaatatcttgggcatttaacttgttcaaaacaagtagaaaagctgaac 315
||||||| |||||||| ||||||| || |||||||||||||||||||||||||||||||
Sbjct: 16 tggaacagaacaaaatgtcttgggtatgtaacttgttcaaaacaagtagaaaagctgaaa 75
Query: 316 gaacattgccaactga-ctcttgggagactacagagccgggtaacagctcatttcagagg 374
||||| ||||| |||| | ||||||| |||||||| | |||||||| |||||||||||||
Sbjct: 76 gaacaatgcca-ctgaacccttgggacactacagatctgggtaacaactcatttcagagg 134
Query: 375 aataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgaccggcttata 434
||||||||||| |||||||||||||||||||||||||| || |||||||| ||||| ||
Sbjct: 135 gataaaccgcgacgagtgggtggcaccgataccgggcctaccgtgcttgactggcttgta 194
Query: 435 ggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctcaacctggtt 494
||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 195 ggagatggagaactctgcaagatagtggccaatcatctcaggcttgatctcaacctggtt 254
Query: 495 gaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggacaatgatcat 554
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 255 gaaggtcttgccattgtagacaccaacaatgcttccaatcatctcagggacaatgatg-t 313
Query: 555 gttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcctttttcgc 614
||| |||||||| ||||| ||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 314 gttgcggagatgggtcttcactggctctggcttctcaccagctggagcatcctttttcgc 373
Query: 615 cttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctggaaccttct 674
||||||||||||||||||||| ||||| || |||| ||||| ||||||||||||||||||
Sbjct: 374 cttgcgcagcttcttgatgagcgccatcggtttccccttcaaacccctctggaaccttct 433
Query: 675 cctggcgcgcgcggggaagagctggacgaggtcgtccgtggacatgtcgagaagcgcatc 734
|||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 434 cctggcgcgcgcggggaagagctggacgaggtcgtcggtggacatgtcgagcagcgcatc 493
Query: 735 taggtcgacgccgcggtagctgtacttgcggaacgtcctcttcttgggagcgccggcggc 794
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 gaggtcgacgccacggtagctgtacttgcggaacgtcctcttcttgggagcgccggcggc 553
Query: 795 aacctccggttcgacatcgacgtccgccatgattgaa 831
||||| || || |||||||||||||||||| |||||
Sbjct: 554 gacctcaggctccacatcgacgtccgccatggttgaa 590
>gb|CF757496.1|CF757496 DSAF1_18_F09.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_18_F09_A011 3', mRNA sequence
Length = 572
Score = 753 bits (380), Expect = 0.0
Identities = 511/551 (92%), Gaps = 4/551 (0%)
Strand = Plus / Minus
Query: 284 taacttgttcaaaacaagtagaaaagctgaacgaacattgccaactg--actcttgggag 341
||||||||||||||||||||||||||||||| ||||| ||||| ||| || |||||||
Sbjct: 565 taacttgttcaaaacaagtagaaaagctgaaagaacaatgcca-ctgtaacccttgggac 507
Query: 342 actacagagcc-gggtaacagctcatttcagaggaataaaccgcgaggagtgggtggcac 400
|||||||| | |||||||| ||||||||||||| ||||||||||| |||||||||||||
Sbjct: 506 actacagatactgggtaacaactcatttcagagggataaaccgcgacgagtgggtggcac 447
Query: 401 cgataccgggcctgccatgcttgaccggcttataggagatggagaactcagcaaggtagt 460
||||||||||||| || |||||||| ||||| ||||||||||||||||| ||||| ||||
Sbjct: 446 cgataccgggcctaccgtgcttgactggcttgtaggagatggagaactctgcaagatagt 387
Query: 461 ggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccgttgtagaccccaa 520
|||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 386 ggccaatcatctcaggcttgatctcaacctggttgaaggtcttgccattgtagacaccaa 327
Query: 521 caatgcttccaatcatctcagggacaatgatcatgttacggagatgtgtcttgactggct 580
||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||
Sbjct: 326 caatgcttccaatcatctcagggacaatgatcatgttgcggagatgggtcttcactggct 267
Query: 581 ctggtttctcaccagcaggagcatcctttttcgccttgcgcagcttcttgatgagtgcca 640
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 266 ctggcttctcaccagctggagcatcctttttcgccttgcgcagcttcttgatgagcgcca 207
Query: 641 tgggcttcctcttcagacccctctggaaccttctcctggcgcgcgcggggaagagctgga 700
| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 tcggtttcctcttcaaacccctctggaaccttctcctggcgcgcgcggggaagagctgga 147
Query: 701 cgaggtcgtccgtggacatgtcgagaagcgcatctaggtcgacgccgcggtagctgtact 760
|||||||||| |||||||||||||| |||||||| ||||||||||| |||||||||||||
Sbjct: 146 cgaggtcgtcggtggacatgtcgagcagcgcatcgaggtcgacgccacggtagctgtact 87
Query: 761 tgcggaacgtcctcttcttgggagcgccggcggcaacctccggttcgacatcgacgtccg 820
|||||||||||||||||||||||||||||||||| ||||| || || |||||||||||||
Sbjct: 86 tgcggaacgtcctcttcttgggagcgccggcggcgacctcaggctccacatcgacgtccg 27
Query: 821 ccatgattgaa 831
||||| |||||
Sbjct: 26 ccatggttgaa 16
>gb|BQ656110.1|BQ656110 pRC1098 Sorghum halepense rhizome cDNA library Sorghum halepense
cDNA clone pRC1098, mRNA sequence
Length = 607
Score = 741 bits (374), Expect = 0.0
Identities = 548/602 (91%), Gaps = 8/602 (1%)
Strand = Plus / Minus
Query: 189 taactcaaaaacttccaacaaaacagcataa-ttgtgcaatgcttagctttgaattcttg 247
||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 601 taactcacatacttccaacaaaacagcataaattgtgcaatgcttagctttgaattctag 542
Query: 248 agctggaatggaacaaaacaaaatatcttgggcatttaacttgttcaaaacaagtagaaa 307
||||||| || |||||||| ||||||| || ||||||||||||||||||||| ||
Sbjct: 541 ggctggaa-----cagaacaaaatgtcttgggtatataacttgttcaaaacaagtagcaa 487
Query: 308 agctgaacgaacattgccaactga-ctcttgggagactacagagccgggtaacagctcat 366
||||||| | ||| ||||| |||| | ||||||| |||||||| | |||||||| |||||
Sbjct: 486 agctgaaaggacaatgcca-ctgaacccttgggacactacagatctgggtaacaactcat 428
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||| ||||||||||| |||||||||||||| ||||||||||| || |||||||||
Sbjct: 427 ttcagagggataaaccgcgacgagtgggtggcaccaataccgggcctaccgtgcttgacc 368
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
||||| ||||||||||||||||| ||||| |||||||| |||||||||||||||||||||
Sbjct: 367 ggcttgtaggagatggagaactctgcaagatagtggccaatcatctcaggcttgatctca 308
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
|||||||||||||||||||| |||||||| || || ||||||||||||||||||||||||
Sbjct: 307 acctggttgaaggtcttgccattgtagacaccgacgatgcttccaatcatctcagggaca 248
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
||||||||||| || ||||| ||||| ||||||||||| ||||||||||| ||||||||
Sbjct: 247 atgatcatgttgcgaagatgggtcttcactggctctggcttctcaccagctggagcatct 188
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||
Sbjct: 187 tttttcgccttgcgcagcttcttgatgagggccatcggcttcctcttcaaacccctctgg 128
Query: 667 aaccttctcctggcgcgcgcggggaagagctggacgaggtcgtccgtggacatgtcgaga 726
|||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||
Sbjct: 127 aaccttctcctggcgcgcgcggggaagagctgaacaaggtcgtcggtggacatgtcgagc 68
Query: 727 agcgcatctaggtcgacgccgcggtagctgtacttgcggaacgtcctcttcttgggagcg 786
|||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 67 agcgcatcgaggtcgacgccacggtagctgtacttgcggaacgtcctcttcttgggagcg 8
Query: 787 cc 788
||
Sbjct: 7 cc 6
>gb|BE593970.1|BE593970 WS1_104_F03.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 545
Score = 729 bits (368), Expect = 0.0
Identities = 486/524 (92%), Gaps = 1/524 (0%)
Strand = Plus / Minus
Query: 334 cttgggagactacagagccgggtaacagctcatttcagaggaataaaccgcgaggagtgg 393
||||||| |||||||| | |||||||| ||||||||||||| ||||||||||| ||||||
Sbjct: 523 cttgggacactacagatctgggtaacaactcatttcagagggataaaccgcgacgagtgg 464
Query: 394 gtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaactcagca 453
|||||||||||||||||||| || |||||||| ||||| ||||||||||||||||| |||
Sbjct: 463 gtggcaccgataccgggcctaccgtgcttgactggcttgtaggagatggagaactctgca 404
Query: 454 aggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccgttgtag 513
|| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 403 agatagtggccaatcatctcaggcttgatctcaacctggttgaaggtcttgccattgtag 344
Query: 514 accccaacaatgcttccaatcatctcagggacaatgatcatgttacggagatgtgtcttg 573
|| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 343 acaccaacaatgcttccaatcatctcagggacaatgatcatgttgcggagatgggtcttc 284
Query: 574 actggctctggtttctcaccagcaggagcatcctttttcgccttgcgcagcttcttgatg 633
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 283 actggctctggcttctcaccagctggagcatcctttttcgccttgcgcagcttcttgatg 224
Query: 634 agtgccatgggcttcctcttcagacccctctggaaccttctcctggcgcgcgcggggaag 693
|| ||||| || |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 223 agcgccatcggtttcctcttcaaacccctctggaaccttctcctggcgcgcgcggggaag 164
Query: 694 agctggacgaggtcgtccgtggacatgtcgagaagcgcatctaggtcgacgccgcggtag 753
||||||||||||||||| |||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 163 agctggacgaggtcgtcggtggacatgtcgagcagcgcatcgaggtcgacgccacggtag 104
Query: 754 ctgtacttgcggaacgtcctcttcttgggagcgccggcggcaacctccggttcgacatcg 813
||||||||||||||||||||||||||||||||||||||||| ||||| || || ||||||
Sbjct: 103 ctgtacttgcggaacgtcctcttcttgggagcgccggcggcgacctcaggctccacatcg 44
Query: 814 acgtccgccatgattgaaagttgaaggtgatcgatgaggtcgcg 857
|||||||||||| ||| ||||||||| || ||| |||||||||
Sbjct: 43 acgtccgccatggttg-aagttgaagctggtcggcgaggtcgcg 1
>gb|BE593990.1|BE593990 WS1_104_H03.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 520
Score = 726 bits (366), Expect = 0.0
Identities = 465/498 (93%)
Strand = Plus / Minus
Query: 334 cttgggagactacagagccgggtaacagctcatttcagaggaataaaccgcgaggagtgg 393
||||||| |||||||| | |||||||| ||||||||||||| ||||||||||| ||||||
Sbjct: 501 cttgggacactacagatctgggtaacaactcatttcagagggataaaccgcgacgagtgg 442
Query: 394 gtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaactcagca 453
|||||||||||||||||||| || |||||||| ||||| ||||||||||||||||| |||
Sbjct: 441 gtggcaccgataccgggcctaccgtgcttgactggcttgtaggagatggagaactctgca 382
Query: 454 aggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccgttgtag 513
|| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 agatagtggccaatcatctcaggcttgatctcaacctggttgaaggtcttgccattgtag 322
Query: 514 accccaacaatgcttccaatcatctcagggacaatgatcatgttacggagatgtgtcttg 573
|| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 321 acaccaacaatgcttccaatcatctcagggacaatgatcatgttgcggagatgggtcttc 262
Query: 574 actggctctggtttctcaccagcaggagcatcctttttcgccttgcgcagcttcttgatg 633
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 actggctctggcttctcaccagctggagcatcctttttcgccttgcgcagcttcttgatg 202
Query: 634 agtgccatgggcttcctcttcagacccctctggaaccttctcctggcgcgcgcggggaag 693
|| ||||| || |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcgccatcggtttcctcttcaaacccctctggaaccttctcctggcgcgcgcggggaag 142
Query: 694 agctggacgaggtcgtccgtggacatgtcgagaagcgcatctaggtcgacgccgcggtag 753
||||||||||||||||| |||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 141 agctggacgaggtcgtcggtggacatgtcgagcagcgcatcgaggtcgacgccacggtag 82
Query: 754 ctgtacttgcggaacgtcctcttcttgggagcgccggcggcaacctccggttcgacatcg 813
||||||||||||||||||||||||||||||||||||||||| ||||| || || ||||||
Sbjct: 81 ctgtacttgcggaacgtcctcttcttgggagcgccggcggcgacctcaggctccacatcg 22
Query: 814 acgtccgccatgattgaa 831
|||||||||||| |||||
Sbjct: 21 acgtccgccatggttgaa 4
>gb|CD210076.1|CD210076 HS1_56_B01.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_56_B01_A012 5', mRNA sequence
Length = 543
Score = 688 bits (347), Expect = 0.0
Identities = 484/527 (91%), Gaps = 2/527 (0%)
Strand = Plus / Minus
Query: 371 gaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgaccggct 430
|||| ||||||||||| |||||||||||||||||||||||||| || |||||||| ||||
Sbjct: 543 gagggataaaccgcgacgagtgggtggcaccgataccgggcctaccgtgcttgactggct 484
Query: 431 tataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctcaacct 490
| ||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||
Sbjct: 483 tgtaggagatggagaactctgcaagatagtggccaatcatctcaggcttgatctcaacct 424
Query: 491 ggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggacaatga 550
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 423 ggttgaaggtcttgccattgtagacaccaacaatgcttccaatcatctcagggacaatga 364
Query: 551 tcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcctttt 610
||||||| |||||||| ||||| ||||||||||| ||||||||||| |||||||||||||
Sbjct: 363 tcatgttgcggagatgggtcttcactggctctggcttctcaccagctggagcatcctttt 304
Query: 611 tcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctggaacc 670
||||||||||||||||||||||||| ||||| || |||||||||| ||||||||||||||
Sbjct: 303 tcgccttgcgcagcttcttgatgagcgccatcggtttcctcttcaaacccctctggaacc 244
Query: 671 ttctcctggcgcgcgcggggaagagctggacgaggtcgtccgtggacatgtcgagaagcg 730
|||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 243 ttctcctggcgcgcgcggggaagagctggacgaggtcgtcggtggacatgtcgagcagcg 184
Query: 731 catctaggtcgacgccgcggtagctgtacttgcggaacgtcctcttcttgggagcgccgg 790
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 catcgaggtcgacgccacggtagctgtacttgcggaacgtcctcttcttgggagcgccgg 124
Query: 791 cggcaacctccggttcgacatcgacgtccg-ccatgattgaaagttgaaggtgatcgatg 849
|||| ||||| || || ||||||||||||| ||||| ||| ||||||||| || ||| |
Sbjct: 123 cggcgacctcaggctccacatcgacgtccgtccatggttg-aagttgaagctggtcggcg 65
Query: 850 aggtcgcggtacgctgtggcggagggcgatgcgctgaggcggagcgg 896
||||||||| | || | ||||| |||||| |||| ||||||| ||||
Sbjct: 64 aggtcgcgggaagcggcggcggcgggcgaggcgcggaggcggcgcgg 18
>gb|BF480867.1|BF480867 FM1_14_C09.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 583
Score = 648 bits (327), Expect = 0.0
Identities = 506/559 (90%), Gaps = 10/559 (1%)
Strand = Plus / Minus
Query: 177 cttagatatgat-taactcaaaaacttccaacaaaacagcataa-ttgtgcaatgcttag 234
|||||||| ||| ||||||| | ||||||||||||||||||||| |||||||||||||||
Sbjct: 552 cttagatacgatataactcacatacttccaacaaaacagcataaattgtgcaatgcttag 493
Query: 235 ctttgaattcttgagctggaatggaacaaaacaaaatatcttgggcatttaacttgttca 294
||||||||||| | ||||||| || |||||||| ||||||| || |||||||||||
Sbjct: 492 ctttgaattctagggctggaa-----cagaacaaaatgtcttgggtatataacttgttca 438
Query: 295 aaacaagtagaaaagctgaacgaacattgccaactga-ctcttgggagactacagagccg 353
|||||||||| ||||||||| | ||| ||||| |||| | ||||||| |||||||| | |
Sbjct: 437 aaacaagtagcaaagctgaaaggacaatgcca-ctgaacccttgggacactacagatctg 379
Query: 354 ggtaacagctcatttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcct 413
||||||| ||||||||||||| ||||||||||| |||||||||||||| |||||||||||
Sbjct: 378 ggtaacaactcatttcagagggataaaccgcgacgagtgggtggcaccaataccgggcct 319
Query: 414 gccatgcttgaccggcttataggagatggagaactcagcaaggtagtggccgatcatctc 473
|| |||||||||||||| ||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 318 accgtgcttgaccggcttgtaggagatggagaactctgcaagatagtggccaatcatctc 259
Query: 474 aggcttgatctcaacctggttgaaggtcttgccgttgtagaccccaacaatgcttccaat 533
||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||
Sbjct: 258 aggcttgatctcaacctggttgaaggtcttgccattgtagacaccgacaatgcttccaat 199
Query: 534 catctcagggacaatgatcatgttacggagatgtgtcttgactggctctggtttctcacc 593
|||||||||||||||||||||||| || ||||| ||||| ||||||||||| ||||||||
Sbjct: 198 catctcagggacaatgatcatgttgcgaagatgggtcttcactggctctggcttctcacc 139
Query: 594 agcaggagcatcctttttcgccttgcgcagcttcttgatgagtgccatgggcttcctctt 653
||| |||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 138 agctggagcatcttttttcgccttgcgcagcttcttgatgagggccatcggcttcctctt 79
Query: 654 cagacccctctggaaccttctcctggcgcgcgcggggaagagctggacgaggtcgtccgt 713
| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 78 -aaacccctctggaaccttctcctggcgcgcgcggggaagagctggacaaggtcgtcggt 20
Query: 714 ggacatgtcgagaagcgca 732
|||||||||||| ||||||
Sbjct: 19 ggacatgtcgagcagcgca 1
>gb|CD209978.1|CD209978 HS1_56_B01.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_56_B01_A012 3', mRNA sequence
Length = 503
Score = 626 bits (316), Expect = e-178
Identities = 453/496 (91%), Gaps = 7/496 (1%)
Strand = Plus / Minus
Query: 189 taactcaaaaacttccaacaaaacagcataattgtgcaatgcttagctttgaattcttga 248
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 490 taactcacatacttccaacaaaacagcataattgtgcaatgcttagctttgaattctagg 431
Query: 249 gctggaatggaacaaaacaaaatatcttgggcatttaacttgttcaaaacaagtagaaaa 308
||||||| || |||||||| ||||||| || ||||||||||||||||||||| |||
Sbjct: 430 gctggaa-----cagaacaaaatgtcttgggtatgtaacttgttcaaaacaagtagcaaa 376
Query: 309 gctgaacgaacattgccaactga-ctcttgggagactacagagccgggtaacagctcatt 367
|||||| ||||| ||||| |||| | ||||||| |||||||| | |||||||| ||||||
Sbjct: 375 gctgaaagaacaatgcca-ctgaacccttgggacactacagatctgggtaacaactcatt 317
Query: 368 tcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgaccg 427
||||||| ||||||||||| |||||||||||||||||||||||||| || |||||||| |
Sbjct: 316 tcagagggataaaccgcgacgagtgggtggcaccgataccgggcctaccgtgcttgactg 257
Query: 428 gcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctcaa 487
|||| ||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||
Sbjct: 256 gcttgtaggagatggagaactctgcaagatagtggccaatcatctcaggcttgatctcaa 197
Query: 488 cctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggacaa 547
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 196 cctggttgaaggtcttgccattgtagacaccaacaatgcttccaatcatctcagggacaa 137
Query: 548 tgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcct 607
|||||||||| |||||||| ||||| ||||||||||| ||||||||||| ||||||||||
Sbjct: 136 tgatcatgttgcggagatgggtcttcactggctctggcttctcaccagctggagcatcct 77
Query: 608 ttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgga 667
|||||||||||||||||||||||||||| ||||| || |||||||||| |||||||||||
Sbjct: 76 ttttcgccttgcgcagcttcttgatgagcgccatcggtttcctcttcaaacccctctgga 17
Query: 668 accttctcctggcgcg 683
||||||||||||||||
Sbjct: 16 accttctcctggcgcg 1
>gb|BF480818.1|BF480818 FM1_14_C09.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 484
Score = 615 bits (310), Expect = e-174
Identities = 434/474 (91%), Gaps = 1/474 (0%)
Strand = Plus / Minus
Query: 423 gaccggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgat 482
||||||||| ||||||||||||||||| ||||| |||||||| |||||||||||||||||
Sbjct: 484 gaccggcttgtaggagatggagaactctgcaagatagtggccaatcatctcaggcttgat 425
Query: 483 ctcaacctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagg 542
|||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||
Sbjct: 424 ctcaacctggttgaaggtcttgccattgtagacaccgacaatgcttccaatcatctcagg 365
Query: 543 gacaatgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagc 602
||||||||||||||| || ||||| ||||| ||||||||||| ||||||||||| |||||
Sbjct: 364 gacaatgatcatgttgcgaagatgggtcttcactggctctggcttctcaccagctggagc 305
Query: 603 atcctttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccct 662
||| ||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||
Sbjct: 304 atcttttttcgccttgcgcagcttcttgatgagggccatcggcttcctcttcaaacccct 245
Query: 663 ctggaaccttctcctggcgcgcgcggggaagagctggacgaggtcgtccgtggacatgtc 722
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 244 ctggaaccttctcctggcgcgcgcggggaagagctggacaaggtcgtcggtggacatgtc 185
Query: 723 gagaagcgcatctaggtcgacgccgcggtagctgtacttgcggaacgtcctcttcttggg 782
||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 gagcagcgcatcgaggtcgacgccgcggtagctgtacttgcggaacgtcctcttcttggg 125
Query: 783 agcgccggcggcaacctccggttcgacatcgacgtccgccatgattgaaagttgaaggtg 842
|||||||||||| ||||| || || |||||||||||||||||| || ||| ||||| ||
Sbjct: 124 agcgccggcggcgacctcaggctccacatcgacgtccgccatggatg-aagctgaagctg 66
Query: 843 atcgatgaggtcgcggtacgctgtggcggagggcgatgcgctgaggcggagcgg 896
||| ||||||||| |||| | ||||| ||||||||||| ||||||| ||||
Sbjct: 65 gtcgtcaaggtcgcgggacgcggcggcggcgggcgatgcgcggaggcggcgcgg 12
>gb|BF481836.1|BF481836 FM1_22_A06.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 538
Score = 585 bits (295), Expect = e-165
Identities = 458/507 (90%), Gaps = 9/507 (1%)
Strand = Plus / Minus
Query: 177 cttagatatgat-taactcaaaaacttccaacaaaacagcataa-ttgtgcaatgcttag 234
|||||||| ||| ||||||| | ||||||||||||||||||||| |||||||||||||||
Sbjct: 501 cttagatacgatataactcacatacttccaacaaaacagcataaattgtgcaatgcttag 442
Query: 235 ctttgaattcttgagctggaatggaacaaaacaaaatatcttgggcatttaacttgttca 294
||||||||||| | ||||||| || |||||||| ||||||| || |||||||||||
Sbjct: 441 ctttgaattctagggctggaa-----cagaacaaaatgtcttgggtatataacttgttca 387
Query: 295 aaacaagtagaaaagctgaacgaacattgccaactga-ctcttgggagactacagagccg 353
|||||||||| ||||||||| | ||| ||||| |||| | ||||||| |||||||| | |
Sbjct: 386 aaacaagtagcaaagctgaaaggacaatgcca-ctgaacccttgggacactacagatctg 328
Query: 354 ggtaacagctcatttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcct 413
||||||| ||||||||||||| ||||||||||| |||||||||||||| |||||||||||
Sbjct: 327 ggtaacaactcatttcagagggataaaccgcgacgagtgggtggcaccaataccgggcct 268
Query: 414 gccatgcttgaccggcttataggagatggagaactcagcaaggtagtggccgatcatctc 473
|| |||||||||||||| ||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 267 accgtgcttgaccggcttgtaggagatggagaactctgcaagatagtggccaatcatctc 208
Query: 474 aggcttgatctcaacctggttgaaggtcttgccgttgtagaccccaacaatgcttccaat 533
||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||
Sbjct: 207 aggcttgatctcaacctggttgaaggtcttgccattgtagacaccgacaatgcttccaat 148
Query: 534 catctcagggacaatgatcatgttacggagatgtgtcttgactggctctggtttctcacc 593
|||||||||||||||||||||||| || ||||| ||||| ||||||||||| ||||||||
Sbjct: 147 catctcagggacaatgatcatgttgcgaagatgggtcttcactggctctggcttctcacc 88
Query: 594 agcaggagcatcctttttcgccttgcgcagcttcttgatgagtgccatgggcttcctctt 653
||| |||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 87 agctggagcatcttttttcgccttgcgcagcttcttgatgagggccatcggcttcctctt 28
Query: 654 cagacccctctggaaccttctcctggc 680
|| ||||||||||||||||||||||||
Sbjct: 27 caaacccctctggaaccttctcctggc 1
>gb|CF481944.1|CF481944 POL1_75_G03.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_75_G03_A002 3', mRNA sequence
Length = 465
Score = 581 bits (293), Expect = e-164
Identities = 427/469 (91%), Gaps = 7/469 (1%)
Strand = Plus / Minus
Query: 224 gcaatgcttagctttgaattcttgagctggaatggaacaaaacaaaatatcttgggcatt 283
|||||||||||||||||||||| | ||||||| || |||||||| ||||||| ||
Sbjct: 463 gcaatgcttagctttgaattctagggctggaa-----cagaacaaaatgtcttgggtatg 409
Query: 284 taacttgttcaaaacaagtagaaaagctgaacgaacattgccaactga-ctcttgggaga 342
||||||||||||||||||||||||||||||| ||||| ||||| |||| | ||||||| |
Sbjct: 408 taacttgttcaaaacaagtagaaaagctgaaagaacaatgcca-ctgaacccttgggaca 350
Query: 343 ctacagagccgggtaacagctcatttcagaggaataaaccgcgaggagtgggtggcaccg 402
||||||| | |||||||| ||||||||||| | ||||||||||| |||||||||||||||
Sbjct: 349 ctacagatctgggtaacaactcatttcagaaggataaaccgcgacgagtgggtggcaccg 290
Query: 403 ataccgggcctgccatgcttgaccggcttataggagatggagaactcagcaaggtagtgg 462
||||||||||| || |||||||| ||||| || |||||||||||||| ||||| ||||||
Sbjct: 289 ataccgggcctaccgtgcttgactggcttgtaagagatggagaactctgcaagatagtgg 230
Query: 463 ccgatcatctcaggcttgatctcaacctggttgaaggtcttgccgttgtagaccccaaca 522
|| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 229 ccaatcatctcaggcttgatctcaacctggttgaaggtcttgccattgtagacaccaaca 170
Query: 523 atgcttccaatcatctcagggacaatgatcatgttacggagatgtgtcttgactggctct 582
||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||
Sbjct: 169 atgcttccaatcatctcagggacaatgatcatgttgcggagatgggtcttcactggctct 110
Query: 583 ggtttctcaccagcaggagcatcctttttcgccttgcgcagcttcttgatgagtgccatg 642
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 109 ggcttctcaccagctggagcatcctttttcgccttgcgcagcttcttgatgagcgccatc 50
Query: 643 ggcttcctcttcagacccctctggaaccttctcctggcgcgcgcgggga 691
|| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 49 ggtttcctcttcaaacccctctggaaccttctcctggcgcgcgcgggga 1
>gb|BF481993.1|BF481993 FM1_22_A06.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 449
Score = 569 bits (287), Expect = e-160
Identities = 402/439 (91%), Gaps = 1/439 (0%)
Strand = Plus / Minus
Query: 458 agtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccgttgtagaccc 517
||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 449 agtggccaatcatctcaggcttgatctcaacctggttgaaggtcttgccattgtagacac 390
Query: 518 caacaatgcttccaatcatctcagggacaatgatcatgttacggagatgtgtcttgactg 577
| |||||||||||||||||||||||||||||||||||||| || ||||| ||||| ||||
Sbjct: 389 cgacaatgcttccaatcatctcagggacaatgatcatgttgcgaagatgggtcttcactg 330
Query: 578 gctctggtttctcaccagcaggagcatcctttttcgccttgcgcagcttcttgatgagtg 637
||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||| |
Sbjct: 329 gctctggcttctcaccagctggagcatcttttttcgccttgcgcagcttcttgatgaggg 270
Query: 638 ccatgggcttcctcttcagacccctctggaaccttctcctggcgcgcgcggggaagagct 697
|||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ccatcggcttcctcttcaaacccctctggaaccttctcctggcgcgcgcggggaagagct 210
Query: 698 ggacgaggtcgtccgtggacatgtcgagaagcgcatctaggtcgacgccgcggtagctgt 757
|||| |||||||| |||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 209 ggacaaggtcgtcggtggacatgtcgagcagcgcatcgaggtcgacgccgcggtagctgt 150
Query: 758 acttgcggaacgtcctcttcttgggagcgccggcggcaacctccggttcgacatcgacgt 817
||||||||||||||||||||||||||||||||||||| ||||| || || ||||||||||
Sbjct: 149 acttgcggaacgtcctcttcttgggagcgccggcggcgacctcaggctccacatcgacgt 90
Query: 818 ccgccatgattgaaagttgaaggtgatcgatgaggtcgcggtacgctgtggcggagggcg 877
|||||||| || ||| ||||| || ||| ||||||||| |||| | ||||| |||||
Sbjct: 89 ccgccatggatg-aagctgaagctggtcgtcaaggtcgcgggacgcggcggcggcgggcg 31
Query: 878 atgcgctgaggcggagcgg 896
|||||| ||||||| ||||
Sbjct: 30 atgcgcggaggcggcgcgg 12
>gb|CW141478.1|CW141478 104_532_11136334_116_34935_089 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11136334, DNA
sequence
Length = 665
Score = 525 bits (265), Expect = e-147
Identities = 387/425 (91%), Gaps = 7/425 (1%)
Strand = Plus / Minus
Query: 189 taactcaaaaacttccaacaaaacagcataattgtgcaatgcttagctttgaattcttga 248
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 458 taactcacatacttccaacaaaacagcataattgtgcaatgcttagctttgaattctagg 399
Query: 249 gctggaatggaacaaaacaaaatatcttgggcatttaacttgttcaaaacaagtagaaaa 308
||||||| || |||||||| ||||||| || |||||||||||||||||||||||||
Sbjct: 398 gctggaa-----cagaacaaaatgtcttgggtatgtaacttgttcaaaacaagtagaaaa 344
Query: 309 gctgaacgaacattgccaactga-ctcttgggagactacagagccgggtaacagctcatt 367
|||||| ||||| ||||| |||| | ||||||| |||||||| | |||||||| ||||||
Sbjct: 343 gctgaaagaacaatgcca-ctgaacccttgggacactacagatctgggtaacaactcatt 285
Query: 368 tcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgaccg 427
||||||| ||||||||||| |||||||||||||||||||||||||| || |||||||| |
Sbjct: 284 tcagagggataaaccgcgacgagtgggtggcaccgataccgggcctaccgtgcttgactg 225
Query: 428 gcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctcaa 487
|||| ||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||
Sbjct: 224 gcttgtaggagatggagaactctgcaagatagtggccaatcatctcaggcttgatctcaa 165
Query: 488 cctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggacaa 547
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 164 cctggttgaaggtcttgccattgtagacaccaacaatgcttccaatcatctcagggacaa 105
Query: 548 tgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcct 607
|||||||||| |||||||| ||||| ||||||||||| ||||||||||| ||||||||||
Sbjct: 104 tgatcatgttgcggagatgggtcttcactggctctggcttctcaccagctggagcatcct 45
Query: 608 ttttc 612
|||||
Sbjct: 44 ttttc 40
>gb|CW476758.1|CW476758 fsbb001f233m02k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f233m02, DNA
sequence
Length = 649
Score = 525 bits (265), Expect = e-147
Identities = 387/425 (91%), Gaps = 7/425 (1%)
Strand = Plus / Minus
Query: 189 taactcaaaaacttccaacaaaacagcataattgtgcaatgcttagctttgaattcttga 248
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 509 taactcacatacttccaacaaaacagcataattgtgcaatgcttagctttgaattctagg 450
Query: 249 gctggaatggaacaaaacaaaatatcttgggcatttaacttgttcaaaacaagtagaaaa 308
||||||| || |||||||| ||||||| || |||||||||||||||||||||||||
Sbjct: 449 gctggaa-----cagaacaaaatgtcttgggtatgtaacttgttcaaaacaagtagaaaa 395
Query: 309 gctgaacgaacattgccaactga-ctcttgggagactacagagccgggtaacagctcatt 367
|||||| ||||| ||||| |||| | ||||||| |||||||| | |||||||| ||||||
Sbjct: 394 gctgaaagaacaatgcca-ctgaacccttgggacactacagatctgggtaacaactcatt 336
Query: 368 tcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgaccg 427
||||||| ||||||||||| |||||||||||||||||||||||||| || |||||||| |
Sbjct: 335 tcagagggataaaccgcgacgagtgggtggcaccgataccgggcctaccgtgcttgactg 276
Query: 428 gcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctcaa 487
|||| ||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||
Sbjct: 275 gcttgtaggagatggagaactctgcaagatagtggccaatcatctcaggcttgatctcaa 216
Query: 488 cctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggacaa 547
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 215 cctggttgaaggtcttgccattgtagacaccaacaatgcttccaatcatctcagggacaa 156
Query: 548 tgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcct 607
|||||||||| |||||||| ||||| ||||||||||| ||||||||||| ||||||||||
Sbjct: 155 tgatcatgttgcggagatgggtcttcactggctctggcttctcaccagctggagcatcct 96
Query: 608 ttttc 612
|||||
Sbjct: 95 ttttc 91
>gb|AW565437.1|AW565437 LG1_344_G07.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 560
Score = 517 bits (261), Expect = e-145
Identities = 386/425 (90%), Gaps = 7/425 (1%)
Strand = Plus / Minus
Query: 189 taactcaaaaacttccaacaaaacagcataattgtgcaatgcttagctttgaattcttga 248
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 524 taactcacatacttccaacaaaacagcataattgtgcaatgcttagctttgaattctagg 465
Query: 249 gctggaatggaacaaaacaaaatatcttgggcatttaacttgttcaaaacaagtagaaaa 308
||||||| || |||||||| ||||||| || |||||||||||||||||||||||||
Sbjct: 464 gctggaa-----cagaacaaaatgtcttgggtatgtaacttgttcaaaacaagtagaaaa 410
Query: 309 gctgaacgaacattgccaactga-ctcttgggagactacagagccgggtaacagctcatt 367
|||||| ||||| ||||| |||| | ||||||| |||||||| | |||||||| ||||||
Sbjct: 409 gctgaaagaacaatgcca-ctgaacccttgggacactacagatctgggtaacaactcatt 351
Query: 368 tcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgaccg 427
||||||| ||||||||||| |||||||||||||||||||||||||| || |||||||| |
Sbjct: 350 tcagagggataaaccgcgacgagtgggtggcaccgataccgggcctaccgtgcttgactg 291
Query: 428 gcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctcaa 487
|||| ||||| ||||||||||| ||||| |||||||| ||||||||||||||||||||||
Sbjct: 290 gcttgtaggaaatggagaactctgcaagatagtggccaatcatctcaggcttgatctcaa 231
Query: 488 cctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggacaa 547
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 230 cctggttgaaggtcttgccattgtagacaccaacaatgcttccaatcatctcagggacaa 171
Query: 548 tgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcct 607
|||||||||| |||||||| ||||| ||||||||||| ||||||||||| ||||||||||
Sbjct: 170 tgatcatgttgcggagatgggtcttcactggctctggcttctcaccagctggagcatcct 111
Query: 608 ttttc 612
|||||
Sbjct: 110 ttttc 106
>gb|AW563755.1|AW563755 LG1_248_G12.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 588
Score = 511 bits (258), Expect = e-143
Identities = 378/418 (90%)
Strand = Plus / Minus
Query: 362 ctcatttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgct 421
|||| ||||||||||| |||||||| |||||||| ||||||||||||||||| || ||||
Sbjct: 419 ctcacttcagaggaatgaaccgcgaagagtgggtagcaccgataccgggcctaccgtgct 360
Query: 422 tgaccggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttga 481
|||| ||||| || |||||||||||||| || ||||||||||| |||||||| |||||||
Sbjct: 359 tgacaggcttgtacgagatggagaactctgcgaggtagtggccaatcatctccggcttga 300
Query: 482 tctcaacctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcag 541
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 299 tctcaacctggttgaaggtcttgccgttgtagacaccaacaatgctcccaatcatctcag 240
Query: 542 ggacaatgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggag 601
| |||||||||||||| ||||| || ||||| || ||||| || |||||||| || || |
Sbjct: 239 gcacaatgatcatgttgcggaggtgggtcttcacaggctcaggcttctcaccggcggggg 180
Query: 602 catcctttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccc 661
| ||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 179 cgtcctttttcgctttgcggagcttcttgatgagcgccatgggcttcctcttcagacccc 120
Query: 662 tctggaaccttctcctggcgcgcgcggggaagagctggacgaggtcgtccgtggacatgt 721
|||||||||| | || |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 119 tctggaacctccgccgtgcgcgcgcggggaagagctggacgaggtcgtcggtggacatgt 60
Query: 722 cgagaagcgcatctaggtcgacgccgcggtagctgtacttgcggaacgtcctcttctt 779
|||| ||||| || ||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 59 cgaggagcgcgtcgaggtccacgccgcggtagctgtacttgcggaacgtccttttctt 2
>gb|AW672010.1|AW672010 LG1_354_E09.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 531
Score = 511 bits (258), Expect = e-143
Identities = 378/418 (90%)
Strand = Plus / Minus
Query: 362 ctcatttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgct 421
|||| ||||||||||| |||||||| |||||||| ||||||||||||||||| || ||||
Sbjct: 529 ctcacttcagaggaatgaaccgcgaagagtgggtagcaccgataccgggcctaccgtgct 470
Query: 422 tgaccggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttga 481
|||| ||||| || |||||||||||||| || ||||||||||| |||||||| |||||||
Sbjct: 469 tgacaggcttgtacgagatggagaactctgcgaggtagtggccaatcatctccggcttga 410
Query: 482 tctcaacctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcag 541
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 409 tctcaacctggttgaaggtcttgccgttgtagacaccaacaatgctcccaatcatctcag 350
Query: 542 ggacaatgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggag 601
| |||||||||||||| ||||| || ||||| || ||||| || |||||||| || || |
Sbjct: 349 gcacaatgatcatgttgcggaggtgggtcttcacaggctcaggcttctcaccggcggggg 290
Query: 602 catcctttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccc 661
| ||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 289 cgtcctttttcgctttgcggagcttcttgatgagcgccatgggcttcctcttcagacccc 230
Query: 662 tctggaaccttctcctggcgcgcgcggggaagagctggacgaggtcgtccgtggacatgt 721
|||||||||| | || |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 229 tctggaacctccgccgtgcgcgcgcggggaagagctggacgaggtcgtcggtggacatgt 170
Query: 722 cgagaagcgcatctaggtcgacgccgcggtagctgtacttgcggaacgtcctcttctt 779
|||| ||||| || ||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 169 cgaggagcgcgtcgaggtccacgccgcggtagctgtacttgcggaacgtccttttctt 112
>gb|BE592601.1|BE592601 WS1_95_F01.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 574
Score = 511 bits (258), Expect = e-143
Identities = 378/418 (90%)
Strand = Plus / Minus
Query: 362 ctcatttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgct 421
|||| ||||||||||| |||||||| |||||||| ||||||||||||||||| || ||||
Sbjct: 541 ctcacttcagaggaatgaaccgcgaagagtgggtagcaccgataccgggcctaccgtgct 482
Query: 422 tgaccggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttga 481
|||| ||||| || |||||||||||||| || ||||||||||| |||||||| |||||||
Sbjct: 481 tgacaggcttgtacgagatggagaactctgcgaggtagtggccaatcatctccggcttga 422
Query: 482 tctcaacctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcag 541
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 421 tctcaacctggttgaaggtcttgccgttgtagacaccaacaatgctcccaatcatctcag 362
Query: 542 ggacaatgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggag 601
| |||||||||||||| ||||| || ||||| || ||||| || |||||||| || || |
Sbjct: 361 gcacaatgatcatgttgcggaggtgggtcttcacaggctcaggcttctcaccggcggggg 302
Query: 602 catcctttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccc 661
| ||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 301 cgtcctttttcgctttgcggagcttcttgatgagcgccatgggcttcctcttcagacccc 242
Query: 662 tctggaaccttctcctggcgcgcgcggggaagagctggacgaggtcgtccgtggacatgt 721
|||||||||| | || |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 241 tctggaacctccgccgtgcgcgcgcggggaagagctggacgaggtcgtcggtggacatgt 182
Query: 722 cgagaagcgcatctaggtcgacgccgcggtagctgtacttgcggaacgtcctcttctt 779
|||| ||||| || ||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 181 cgaggagcgcgtcgaggtccacgccgcggtagctgtacttgcggaacgtccttttctt 124
>gb|CF757003.1|CF757003 DSAF1_12_D10.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_12_D10_A011 3', mRNA sequence
Length = 592
Score = 511 bits (258), Expect = e-143
Identities = 378/418 (90%)
Strand = Plus / Minus
Query: 362 ctcatttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgct 421
|||| ||||||||||| |||||||| |||||||| ||||||||||||||||| || ||||
Sbjct: 439 ctcacttcagaggaatgaaccgcgaagagtgggtagcaccgataccgggcctaccgtgct 380
Query: 422 tgaccggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttga 481
|||| ||||| || |||||||||||||| || ||||||||||| |||||||| |||||||
Sbjct: 379 tgacaggcttgtacgagatggagaactctgcgaggtagtggccaatcatctccggcttga 320
Query: 482 tctcaacctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcag 541
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 319 tctcaacctggttgaaggtcttgccgttgtagacaccaacaatgctcccaatcatctcag 260
Query: 542 ggacaatgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggag 601
| |||||||||||||| ||||| || ||||| || ||||| || |||||||| || || |
Sbjct: 259 gcacaatgatcatgttgcggaggtgggtcttcacaggctcaggcttctcaccggcggggg 200
Query: 602 catcctttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccc 661
| ||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 199 cgtcctttttcgctttgcggagcttcttgatgagcgccatgggcttcctcttcagacccc 140
Query: 662 tctggaaccttctcctggcgcgcgcggggaagagctggacgaggtcgtccgtggacatgt 721
|||||||||| | || |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 139 tctggaacctccgccgtgcgcgcgcggggaagagctggacgaggtcgtcggtggacatgt 80
Query: 722 cgagaagcgcatctaggtcgacgccgcggtagctgtacttgcggaacgtcctcttctt 779
|||| ||||| || ||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 79 cgaggagcgcgtcgaggtccacgccgcggtagctgtacttgcggaacgtccttttctt 22
>gb|CX606679.1|CX606679 ANR1_4_H06.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_4_H06_A002 3', mRNA sequence
Length = 690
Score = 511 bits (258), Expect = e-143
Identities = 378/418 (90%)
Strand = Plus / Minus
Query: 362 ctcatttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgct 421
|||| ||||||||||| |||||||| |||||||| ||||||||||||||||| || ||||
Sbjct: 542 ctcacttcagaggaatgaaccgcgaagagtgggtagcaccgataccgggcctaccgtgct 483
Query: 422 tgaccggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttga 481
|||| ||||| || |||||||||||||| || ||||||||||| |||||||| |||||||
Sbjct: 482 tgacaggcttgtacgagatggagaactctgcgaggtagtggccaatcatctccggcttga 423
Query: 482 tctcaacctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcag 541
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 422 tctcaacctggttgaaggtcttgccgttgtagacaccaacaatgctcccaatcatctcag 363
Query: 542 ggacaatgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggag 601
| |||||||||||||| ||||| || ||||| || ||||| || |||||||| || || |
Sbjct: 362 gcacaatgatcatgttgcggaggtgggtcttcacaggctcaggcttctcaccggcggggg 303
Query: 602 catcctttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccc 661
| ||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 302 cgtcctttttcgctttgcggagcttcttgatgagcgccatgggcttcctcttcagacccc 243
Query: 662 tctggaaccttctcctggcgcgcgcggggaagagctggacgaggtcgtccgtggacatgt 721
|||||||||| | || |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 242 tctggaacctccgccgtgcgcgcgcggggaagagctggacgaggtcgtcggtggacatgt 183
Query: 722 cgagaagcgcatctaggtcgacgccgcggtagctgtacttgcggaacgtcctcttctt 779
|||| ||||| || ||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 182 cgaggagcgcgtcgaggtccacgccgcggtagctgtacttgcggaacgtccttttctt 125
>gb|CX606773.1|CX606773 ANR1_4_H06.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_4_H06_A002 5', mRNA sequence
Length = 716
Score = 511 bits (258), Expect = e-143
Identities = 378/418 (90%)
Strand = Plus / Minus
Query: 362 ctcatttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgct 421
|||| ||||||||||| |||||||| |||||||| ||||||||||||||||| || ||||
Sbjct: 545 ctcacttcagaggaatgaaccgcgaagagtgggtagcaccgataccgggcctaccgtgct 486
Query: 422 tgaccggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttga 481
|||| ||||| || |||||||||||||| || ||||||||||| |||||||| |||||||
Sbjct: 485 tgacaggcttgtacgagatggagaactctgcgaggtagtggccaatcatctccggcttga 426
Query: 482 tctcaacctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcag 541
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 425 tctcaacctggttgaaggtcttgccgttgtagacaccaacaatgctcccaatcatctcag 366
Query: 542 ggacaatgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggag 601
| |||||||||||||| ||||| || ||||| || ||||| || |||||||| || || |
Sbjct: 365 gcacaatgatcatgttgcggaggtgggtcttcacaggctcaggcttctcaccggcggggg 306
Query: 602 catcctttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccc 661
| ||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 305 cgtcctttttcgctttgcggagcttcttgatgagcgccatgggcttcctcttcagacccc 246
Query: 662 tctggaaccttctcctggcgcgcgcggggaagagctggacgaggtcgtccgtggacatgt 721
|||||||||| | || |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 245 tctggaacctccgccgtgcgcgcgcggggaagagctggacgaggtcgtcggtggacatgt 186
Query: 722 cgagaagcgcatctaggtcgacgccgcggtagctgtacttgcggaacgtcctcttctt 779
|||| ||||| || ||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 185 cgaggagcgcgtcgaggtccacgccgcggtagctgtacttgcggaacgtccttttctt 128
>gb|DN552653.1|DN552653 pSHR-RT-MR-H1_A12_C142 pSHR Sorghum halepense cDNA, mRNA sequence
Length = 464
Score = 504 bits (254), Expect = e-141
Identities = 379/418 (90%), Gaps = 7/418 (1%)
Strand = Plus / Plus
Query: 189 taactcaaaaacttccaacaaaacagcataattgtgcaatgcttagctttgaattcttga 248
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 53 taactcacatacttccaacaaaacagcataattgtgcaatgcttagctttgaattctagg 112
Query: 249 gctggaatggaacaaaacaaaatatcttgggcatttaacttgttcaaaacaagtagaaaa 308
||||||| || |||||||| ||||||| || ||||||||||||||||||||| |||
Sbjct: 113 gctggaa-----cagaacaaaatgtcttgggtatgtaacttgttcaaaacaagtagcaaa 167
Query: 309 gctgaacgaacattgccaactga-ctcttgggagactacagagccgggtaacagctcatt 367
|||||| ||||| ||||| |||| | ||||||| |||||||| | |||||||| ||||||
Sbjct: 168 gctgaaagaacaatgcca-ctgaacccttgggacactacagatctgggtaacaactcatt 226
Query: 368 tcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgaccg 427
||||||| ||||||||||| |||||||||||||||||||||||||| || |||||||| |
Sbjct: 227 tcagagggataaaccgcgacgagtgggtggcaccgataccgggcctaccgtgcttgactg 286
Query: 428 gcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctcaa 487
|||| ||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||
Sbjct: 287 gcttgtaggagatggagaactctgcaagatagtggccaatcatctcaggcttgatctcaa 346
Query: 488 cctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggacaa 547
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 347 cctggttgaaggtcttgccattgtagacaccaacaatgcttccaatcatctcagggacaa 406
Query: 548 tgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatc 605
|||||||||| |||||||| ||||| ||||||||||| ||||||||||| ||||||||
Sbjct: 407 tgatcatgttgcggagatgggtcttcactggctctggcttctcaccagctggagcatc 464
>gb|BE593837.1|BE593837 WS1_103_A01.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 500
Score = 496 bits (250), Expect = e-138
Identities = 377/418 (90%), Gaps = 1/418 (0%)
Strand = Plus / Minus
Query: 362 ctcatttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgct 421
|||| ||||||||||| |||||||| || ||||| ||||||||||||||||| || ||||
Sbjct: 422 ctcacttcagaggaatgaaccgcgaaga-tgggtagcaccgataccgggcctaccgtgct 364
Query: 422 tgaccggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttga 481
|||| ||||| || |||||||||||||| || ||||||||||| |||||||| |||||||
Sbjct: 363 tgacaggcttgtacgagatggagaactctgcgaggtagtggccaatcatctccggcttga 304
Query: 482 tctcaacctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcag 541
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 303 tctcaacctggttgaaggtcttgccgttgtagacaccaacaatgctcccaatcatctcag 244
Query: 542 ggacaatgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggag 601
| |||||||||||||| ||||| || ||||| || ||||| || |||||||| || || |
Sbjct: 243 gcacaatgatcatgttgcggaggtgggtcttcacaggctcaggcttctcaccggcggggg 184
Query: 602 catcctttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccc 661
| ||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 183 cgtcctttttcgctttgcggagcttcttgatgagcgccatgggcttcctcttcagacccc 124
Query: 662 tctggaaccttctcctggcgcgcgcggggaagagctggacgaggtcgtccgtggacatgt 721
|||||||||| | || |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 123 tctggaacctccgccgtgcgcgcgcggggaagagctggacgaggtcgtcggtggacatgt 64
Query: 722 cgagaagcgcatctaggtcgacgccgcggtagctgtacttgcggaacgtcctcttctt 779
|||| ||||| || ||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 63 cgaggagcgcgtcgaggtccacgccgcggtagctgtacttgcggaacgtccttttctt 6
>gb|CW476757.1|CW476757 fsbb001f233m02f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f233m02, DNA
sequence
Length = 673
Score = 486 bits (245), Expect = e-135
Identities = 366/404 (90%), Gaps = 7/404 (1%)
Strand = Plus / Plus
Query: 189 taactcaaaaacttccaacaaaacagcataattgtgcaatgcttagctttgaattcttga 248
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 276 taactcacatacttccaacaaaacagcataattgtgcaatgcttagctttgaattctagg 335
Query: 249 gctggaatggaacaaaacaaaatatcttgggcatttaacttgttcaaaacaagtagaaaa 308
||||||| || |||||||| ||||||| || |||||||||||||||||||||||||
Sbjct: 336 gctggaa-----cagaacaaaatgtcttgggtatgtaacttgttcaaaacaagtagaaaa 390
Query: 309 gctgaacgaacattgccaactga-ctcttgggagactacagagccgggtaacagctcatt 367
|||||| ||||| ||||| |||| | ||||||| |||||||| | |||||||| ||||||
Sbjct: 391 gctgaaagaacaatgcca-ctgaacccttgggacactacagatctgggtaacaactcatt 449
Query: 368 tcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgaccg 427
||||||| ||||||||||| |||||||||||||||||||||||||| || |||||||| |
Sbjct: 450 tcagagggataaaccgcgacgagtgggtggcaccgataccgggcctaccgtgcttgactg 509
Query: 428 gcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctcaa 487
|||| ||||||||||||||||| ||||| |||||||| ||||||||| ||||||||||||
Sbjct: 510 gcttgtaggagatggagaactctgcaagatagtggccaatcatctcangcttgatctcaa 569
Query: 488 cctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggacaa 547
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 570 cctggttgaaggtcttgccattgtagacaccaacaatgcttccaatcatctcagggacaa 629
Query: 548 tgatcatgttacggagatgtgtcttgactggctctggtttctca 591
|||||||||| |||||||| ||||| ||||||||||| ||||||
Sbjct: 630 tgatcatgttgcggagatgggtcttcactggctctggcttctca 673
>gb|BG356692.1|BG356692 OV2_26_G03.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 356
Score = 470 bits (237), Expect = e-130
Identities = 312/337 (92%)
Strand = Plus / Minus
Query: 334 cttgggagactacagagccgggtaacagctcatttcagaggaataaaccgcgaggagtgg 393
||||||| |||||||| | |||||||| ||||||||||||| ||||||||||| ||||||
Sbjct: 337 cttgggacactacagatctgggtaacaactcatttcagagggataaaccgcgacgagtgg 278
Query: 394 gtggcaccgataccgggcctgccatgcttgaccggcttataggagatggagaactcagca 453
|||||||||||||||||||| || |||||||| ||||| ||||||||||||||||| |||
Sbjct: 277 gtggcaccgataccgggcctaccgtgcttgactggcttgtaggagatggagaactctgca 218
Query: 454 aggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttgccgttgtag 513
|| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 217 agatagtggccaatcatctcaggcttgatctcaacctggttgaaggtcttgccattgtag 158
Query: 514 accccaacaatgcttccaatcatctcagggacaatgatcatgttacggagatgtgtcttg 573
|| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 157 acaccaacaatgcttccaatcatctcagggacaatgatcatgttgcggagatgggtcttc 98
Query: 574 actggctctggtttctcaccagcaggagcatcctttttcgccttgcgcagcttcttgatg 633
||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 97 actggctctggcttctcaccagctggagcaccctttttcgccttgcgcagcttcttgatg 38
Query: 634 agtgccatgggcttcctcttcagacccctctggaacc 670
|| ||||| || |||||||||| ||||||||||||||
Sbjct: 37 agcgccatcggtttcctcttcaaacccctctggaacc 1
>gb|BE592729.1|BE592729 WS1_95_F01.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 503
Score = 448 bits (226), Expect = e-124
Identities = 334/370 (90%)
Strand = Plus / Minus
Query: 362 ctcatttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgct 421
|||| ||||||||||| |||||||| |||||||| ||||||||||||||||| || ||||
Sbjct: 382 ctcacttcagaggaatgaaccgcgaagagtgggtagcaccgataccgggcctaccgtgct 323
Query: 422 tgaccggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttga 481
|||| ||||| || |||||||||||||| || ||||||||||| |||||||| |||||||
Sbjct: 322 tgacaggcttgtacgagatggagaactctgcgaggtagtggccaatcatctccggcttga 263
Query: 482 tctcaacctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcag 541
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 262 tctcaacctggttgaaggtcttgccgttgtagacaccaacaatgctcccaatcatctcag 203
Query: 542 ggacaatgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggag 601
| |||||||||||||| ||||| || ||||| || ||||| || |||||||| || || |
Sbjct: 202 gcacaatgatcatgttgcggaggtgggtcttcacaggctcaggcttctcaccggcggggg 143
Query: 602 catcctttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccc 661
| ||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 142 cgtcctttttcgctttgcggagcttcttgatgagcgccatgggcttcctcttcagacccc 83
Query: 662 tctggaaccttctcctggcgcgcgcggggaagagctggacgaggtcgtccgtggacatgt 721
|||||||||| | || |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 82 tctggaacctccgccgtgcgcgcgcggggaagagctggacgaggtcgtcggtggacatgt 23
Query: 722 cgagaagcgc 731
|||| |||||
Sbjct: 22 cgaggagcgc 13
>gb|CF761682.1|CF761682 DSAF1_79_F02.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_79_F02_A011 5', mRNA sequence
Length = 387
Score = 448 bits (226), Expect = e-124
Identities = 328/362 (90%)
Strand = Plus / Minus
Query: 418 tgcttgaccggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggc 477
|||||||| ||||| || |||||||||||||| || ||||||||||| |||||||| |||
Sbjct: 383 tgcttgacaggcttgtacgagatggagaactctgcgaggtagtggccaatcatctccggc 324
Query: 478 ttgatctcaacctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatc 537
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 323 ttgatctcaacctggttgaaggtcttgccgttgtagacaccaacaatgctcccaatcatc 264
Query: 538 tcagggacaatgatcatgttacggagatgtgtcttgactggctctggtttctcaccagca 597
||||| |||||||||||||| ||||| || ||||| || ||||| || |||||||| ||
Sbjct: 263 tcaggcacaatgatcatgttgcggaggtgggtcttcacaggctcaggcttctcaccggcg 204
Query: 598 ggagcatcctttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcaga 657
|| || ||||||||||| ||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 203 ggggcgtcctttttcgctttgcggagcttcttgatgagcgccatgggcttcctcttcaga 144
Query: 658 cccctctggaaccttctcctggcgcgcgcggggaagagctggacgaggtcgtccgtggac 717
|||||||||||||| | || |||||||||||||||||||||||||||||||| ||||||
Sbjct: 143 cccctctggaacctccgccgtgcgcgcgcggggaagagctggacgaggtcgtcggtggac 84
Query: 718 atgtcgagaagcgcatctaggtcgacgccgcggtagctgtacttgcggaacgtcctcttc 777
|||||||| ||||| || ||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 83 atgtcgaggagcgcgtcgaggtccacgccgcggtagctgtacttgcggaacgtccttttc 24
Query: 778 tt 779
||
Sbjct: 23 tt 22
>gb|BG159450.1|BG159450 OV2_8_C05.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 469
Score = 440 bits (222), Expect = e-121
Identities = 327/362 (90%)
Strand = Plus / Minus
Query: 362 ctcatttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgct 421
|||| ||||||||||| |||||||| |||||||| ||||||||||||||||| || ||||
Sbjct: 362 ctcacttcagaggaatgaaccgcgaagagtgggtagcaccgataccgggcctaccgtgct 303
Query: 422 tgaccggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttga 481
|||| ||||| || |||||||||||||| || ||||||||||| |||||||| |||||||
Sbjct: 302 tgacaggcttgtacgagatggagaactctgcgaggtagtggccaatcatctccggcttga 243
Query: 482 tctcaacctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcag 541
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 242 tctcaacctggttgaaggtcttgccgttgtagacaccaacaatgctcccaatcatctcag 183
Query: 542 ggacaatgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggag 601
| |||||||||||||| ||||| || ||||| || ||||| || |||||||| || || |
Sbjct: 182 gcacaatgatcatgttgcggaggtgggtcttcacaggctcaggcttctcaccggcggggg 123
Query: 602 catcctttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccc 661
| ||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 122 cgtcctttttcgctttgcggagcttcttgatgagcgccatgggcttcctcttcagacccc 63
Query: 662 tctggaaccttctcctggcgcgcgcggggaagagctggacgaggtcgtccgtggacatgt 721
|||||||||| | || |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 62 tctggaacctccgccgtgcgcgcgcggggaagagctggacgaggtcgtcggtggacatgt 3
Query: 722 cg 723
||
Sbjct: 2 cg 1
>gb|BG464987.1|BG464987 EM1_34_G02.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 319
Score = 438 bits (221), Expect = e-121
Identities = 288/308 (93%), Gaps = 2/308 (0%)
Strand = Plus / Minus
Query: 517 ccaacaatgcttccaatcatctcagggacaatgatcatgttacggagatgtgtcttgact 576
||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||| |||
Sbjct: 316 ccaacaatgcttccaatcatctcagggacaatgatcangttgcggagatgggtcttcact 257
Query: 577 ggctctggtttctcaccagcaggagcatcctttttcgccttgcgcagcttcttgatgagt 636
|||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 256 ggctctggcttctcaccagctggagcatcctttttcgccttgcgcagcttcttgatgagc 197
Query: 637 gccatgggcttcctcttcagacccctctggaaccttctcctggcgcgcgcggggaagagc 696
||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 gccatcggtttcctcttcaaacccctctggaaccttctcctggcgcgcgcggggaagagc 137
Query: 697 tggacgaggtcgtccgtggacatgtcgagaagcgcatctaggtcgacgccgcggtagctg 756
|||||||||||||| |||||||||||||| |||||||| ||||||||||| |||||||||
Sbjct: 136 tggacgaggtcgtcggtggacatgtcgagcagcgcatcgaggtcgacgccacggtagctg 77
Query: 757 tacttgcggaacgt-cctcttcttgggagcgccggcggcaacctccggttcgacatcgac 815
| |||||||||||| |||||||||||||||||||||||| ||||| || || ||||||||
Sbjct: 76 t-cttgcggaacgtccctcttcttgggagcgccggcggcgacctcaggctccacatcgac 18
Query: 816 gtccgcca 823
||||||||
Sbjct: 17 gtccgcca 10
>gb|CF759036.1|CF759036 DSAF1_40_B08.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_40_B08_A011 5', mRNA sequence
Length = 512
Score = 392 bits (198), Expect = e-107
Identities = 300/334 (89%)
Strand = Plus / Minus
Query: 362 ctcatttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgct 421
|||| ||||||||||| |||||||| |||||||| ||||||||||||||||| || ||||
Sbjct: 334 ctcacttcagaggaatgaaccgcgaagagtgggtagcaccgataccgggcctaccgtgct 275
Query: 422 tgaccggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttga 481
|||| ||||| || |||||||||||||| || ||||||||||| |||||||| |||||||
Sbjct: 274 tgacaggcttgtacgagatggagaactctgcgaggtagtggccaatcatctccggcttga 215
Query: 482 tctcaacctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcag 541
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 214 tctcaacctggttgaaggtcttgccgttgtagacaccaacaatgctcccaatcatctcag 155
Query: 542 ggacaatgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggag 601
| |||||||||||||| ||||| || ||||| || ||||| || |||||||| || || |
Sbjct: 154 gcacaatgatcatgttgcggaggtgggtcttcacaggctcaggcttctcaccggcggggg 95
Query: 602 catcctttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccc 661
| ||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 94 cgtcctttttcgctttgcggagcttcttgatgagcgccatgggcttcctcttcagacccc 35
Query: 662 tctggaaccttctcctggcgcgcgcggggaagag 695
|||||||||| | || |||||||||||||||||
Sbjct: 34 tctggaacctccgccgtgcgcgcgcggggaagag 1
>gb|AW285360.1|AW285360 LG1_244_D04.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 499
Score = 385 bits (194), Expect = e-105
Identities = 296/330 (89%)
Strand = Plus / Minus
Query: 362 ctcatttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgct 421
|||| ||||||||||| |||||||| |||||||| ||||||||||||||||| || ||||
Sbjct: 330 ctcacttcagaggaatgaaccgcgaagagtgggtagcaccgataccgggcctaccgtgct 271
Query: 422 tgaccggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttga 481
|||| ||||| || |||||||||||||| || ||||||||||| |||||||| |||||||
Sbjct: 270 tgacaggcttgtacgagatggagaactctgcgaggtagtggccaatcatctccggcttga 211
Query: 482 tctcaacctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcag 541
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 210 tctcaacctggttgaaggtcttgccgttgtagacaccaacaatgctcccaatcatctcag 151
Query: 542 ggacaatgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggag 601
| |||||||||||||| ||||| || ||||| || ||||| || |||||||| || || |
Sbjct: 150 gcacaatgatcatgttgcggaggtgggtcttcacaggctcaggcttctcaccggcggggg 91
Query: 602 catcctttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccc 661
| ||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 90 cgtcctttttcgctttgcggagcttcttgatgagcgccatgggcttcctcttcagacccc 31
Query: 662 tctggaaccttctcctggcgcgcgcgggga 691
|||||||||| | || |||||||||||||
Sbjct: 30 tctggaacctccgccgtgcgcgcgcgggga 1
>gb|CF772381.1|CF772381 DSBF1_34_C10.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_34_C10_A010 3', mRNA sequence
Length = 508
Score = 385 bits (194), Expect = e-105
Identities = 296/330 (89%)
Strand = Plus / Minus
Query: 362 ctcatttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgct 421
|||| ||||||||||| |||||||| |||||||| ||||||||||||||||| || ||||
Sbjct: 330 ctcacttcagaggaatgaaccgcgaagagtgggtagcaccgataccgggcctaccgtgct 271
Query: 422 tgaccggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttga 481
|||| ||||| || |||||||||||||| || ||||||||||| |||||||| |||||||
Sbjct: 270 tgacaggcttgtacgagatggagaactctgcgaggtagtggccaatcatctccggcttga 211
Query: 482 tctcaacctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcag 541
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 210 tctcaacctggttgaaggtcttgccgttgtagacaccaacaatgctcccaatcatctcag 151
Query: 542 ggacaatgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggag 601
| |||||||||||||| ||||| || ||||| || ||||| || |||||||| || || |
Sbjct: 150 gcacaatgatcatgttgcggaggtgggtcttcacaggctcaggcttctcaccggcggggg 91
Query: 602 catcctttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccc 661
| ||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 90 cgtcctttttcgctttgcggagcttcttgatgagcgccatgggcttcctcttcagacccc 31
Query: 662 tctggaaccttctcctggcgcgcgcgggga 691
|||||||||| | || |||||||||||||
Sbjct: 30 tctggaacctccgccgtgcgcgcgcgggga 1
>gb|BG053794.1|BG053794 RHIZ2_9_H03.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 405
Score = 357 bits (180), Expect = 1e-096
Identities = 255/280 (91%)
Strand = Plus / Minus
Query: 500 tcttgccgttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgttac 559
|||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||| |
Sbjct: 405 tcttgccgttgtagacaccaacaatgctcccaatcatctcaggcacaatgatcatgttgc 346
Query: 560 ggagatgtgtcttgactggctctggtttctcaccagcaggagcatcctttttcgccttgc 619
|||| || ||||| || ||||| || ||||||||||| || || ||||||||||| ||||
Sbjct: 345 ggaggtgggtcttcacaggctcaggcttctcaccagcgggtgcgtcctttttcgctttgc 286
Query: 620 gcagcttcttgatgagtgccatgggcttcctcttcagacccctctggaaccttctcctgg 679
| |||||||||||||| ||||||||||||||||||||||||||||||||||| | || |
Sbjct: 285 ggagcttcttgatgagcgccatgggcttcctcttcagacccctctggaacctccgccgtg 226
Query: 680 cgcgcgcggggaagagctggacgaggtcgtccgtggacatgtcgagaagcgcatctaggt 739
||||||||||||||||||||||||||||||| |||||||||||||| ||||| || ||||
Sbjct: 225 cgcgcgcggggaagagctggacgaggtcgtcggtggacatgtcgaggagcgcgtcgaggt 166
Query: 740 cgacgccgcggtagctgtacttgcggaacgtcctcttctt 779
| ||||||||||||||||||||||||||||||||||||||
Sbjct: 165 ccacgccgcggtagctgtacttgcggaacgtcctcttctt 126
>gb|BE594152.1|BE594152 WS1_103_A01.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 400
Score = 355 bits (179), Expect = 5e-096
Identities = 260/287 (90%)
Strand = Plus / Minus
Query: 493 ttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggacaatgatc 552
||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 400 ttgaaggtcttgccgttgtagacaccaacaatgctcccaatcatctcaggcacaatgatc 341
Query: 553 atgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcctttttc 612
||||| ||||| || ||||| || ||||| || |||||||| || || || |||||||||
Sbjct: 340 atgttgcggaggtgggtcttcacaggctcaggcttctcaccggcgggggcgtcctttttc 281
Query: 613 gccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctggaacctt 672
|| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 280 gctttgcggagcttcttgatgagcgccatgggcttcctcttcagacccctctggaacctc 221
Query: 673 ctcctggcgcgcgcggggaagagctggacgaggtcgtccgtggacatgtcgagaagcgca 732
| || |||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 220 cgccgtgcgcgcgcggggaagagctggacgaggtcgtcggtggacatgtcgaggagcgcg 161
Query: 733 tctaggtcgacgccgcggtagctgtacttgcggaacgtcctcttctt 779
|| ||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 160 tcgaggtccacgccgcggtagctgtacttgcggaacgtccttttctt 114
>gb|BQ656042.1|BQ656042 pRC0344 Sorghum halepense rhizome cDNA library Sorghum halepense
cDNA clone pRC0344, mRNA sequence
Length = 578
Score = 333 bits (168), Expect = 2e-089
Identities = 315/364 (86%)
Strand = Plus / Minus
Query: 385 gaggagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggag 444
||||| ||||| ||||||||||||||||| || |||||||| ||||| || |||||||
Sbjct: 364 gaggaatgggtagcaccgataccgggccttccgtgcttgacgggcttgtaactgatggag 305
Query: 445 aactcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttg 504
|| |||||||||||||| || |||||||||||||||||||||||||| ||||| || ||
Sbjct: 304 aattcagcaaggtagtgcccaatcatctcaggcttgatctcaacctgattgaatgttttc 245
Query: 505 ccgttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgttacggaga 564
|| ||||| || |||| | ||| || |||||||| || |||||||||||||| || |||
Sbjct: 244 ccattgtacactccaattacgctacctatcatctctggcacaatgatcatgttgcgcaga 185
Query: 565 tgtgtcttgactggctctggtttctcaccagcaggagcatcctttttcgccttgcgcagc 624
|| ||| |||| || || || |||||||||||||| || |||||||||||| | ||||||
Sbjct: 184 tgagtcctgacaggttcgggcttctcaccagcaggtgcctcctttttcgccgtccgcagc 125
Query: 625 ttcttgatgagtgccatgggcttcctcttcagacccctctggaaccttctcctggcgcgc 684
|||||||||| ||||| |||||||||||||||||||||||||||||||| | ||||||
Sbjct: 124 ctcttgatgagagccatcggcttcctcttcagacccctctggaaccttctgcgggcgcgg 65
Query: 685 gcggggaagagctggacgaggtcgtccgtggacatgtcgagaagcgcatctaggtcgacg 744
|||||||||||||||||||||||||| |||||||||||||| ||||| || ||||| |||
Sbjct: 64 gcggggaagagctggacgaggtcgtcggtggacatgtcgaggagcgcgtcgaggtccacg 5
Query: 745 ccgc 748
||||
Sbjct: 4 ccgc 1
>gb|CF772635.1|CF772635 DSBF1_37_E06.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_37_E06_A010 3', mRNA sequence
Length = 527
Score = 283 bits (143), Expect = 1e-074
Identities = 266/307 (86%)
Strand = Plus / Minus
Query: 385 gaggagtgggtggcaccgataccgggcctgccatgcttgaccggcttataggagatggag 444
||||| ||||| ||||||||||||||||| || |||||||| ||||| || |||||||
Sbjct: 307 gaggaatgggtagcaccgataccgggccttccgtgcttgacgggcttgtaactgatggag 248
Query: 445 aactcagcaaggtagtggccgatcatctcaggcttgatctcaacctggttgaaggtcttg 504
|| |||||||||||||| || |||||||||||||||||||||||||||||||| || ||
Sbjct: 247 aattcagcaaggtagtgcccaatcatctcaggcttgatctcaacctggttgaatgttttc 188
Query: 505 ccgttgtagaccccaacaatgcttccaatcatctcagggacaatgatcatgttacggaga 564
|| ||||| || |||| | ||| || |||||||| || |||||||||||||| || |||
Sbjct: 187 ccattgtacactccaattacgctacctatcatctctggcacaatgatcatgttgcgcaga 128
Query: 565 tgtgtcttgactggctctggtttctcaccagcaggagcatcctttttcgccttgcgcagc 624
|| ||| |||| ||||| || |||||||||||||| || |||||||||||| ||||||||
Sbjct: 127 tgagtcctgacaggctcgggcttctcaccagcaggtgcctcctttttcgccgtgcgcagc 68
Query: 625 ttcttgatgagtgccatgggcttcctcttcagacccctctggaaccttctcctggcgcgc 684
|||||||||| ||||| |||||||||||||||||||||||||||||||| | ||||||
Sbjct: 67 ctcttgatgagagccatcggcttcctcttcagacccctctggaaccttctgcgggcgcgg 8
Query: 685 gcgggga 691
|||||||
Sbjct: 7 gcgggga 1
>gb|AI724510.1|AI724510 RHIZ1_37_B06.y1_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 420
Score = 270 bits (136), Expect = 2e-070
Identities = 208/232 (89%)
Strand = Plus / Minus
Query: 362 ctcatttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgct 421
|||| ||||||||||| |||||||| |||||||| ||||||||||||||||| || ||||
Sbjct: 232 ctcacttcagaggaatgaaccgcgaagagtgggtagcaccgataccgggcctaccgtgct 173
Query: 422 tgaccggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttga 481
|||| ||||| || |||||||||||||| || ||||||||||| |||||||| |||||||
Sbjct: 172 tgactggcttgtacgagatggagaactctgcgaggtagtggccaatcatctctggcttga 113
Query: 482 tctcaacctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcag 541
|||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||
Sbjct: 112 tctcaacctggttgaaggtcttgccgttgtagacaccgacaatgctcccaatcatctcag 53
Query: 542 ggacaatgatcatgttacggagatgtgtcttgactggctctggtttctcacc 593
| |||||||||||||| ||||| || ||||| || ||||| || ||||||||
Sbjct: 52 gcacaatgatcatgttgcggaggtgggtcttcacaggctcaggcttctcacc 1
>gb|AW565980.1|AW565980 LG1_354_E09.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 402
Score = 270 bits (136), Expect = 2e-070
Identities = 199/220 (90%)
Strand = Plus / Minus
Query: 362 ctcatttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgct 421
|||| ||||||||||| |||||||| |||||||| ||||||||||||||||| || ||||
Sbjct: 224 ctcacttcagaggaatgaaccgcgaagagtgggtagcaccgataccgggcctaccgtgct 165
Query: 422 tgaccggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttga 481
|||| ||||| || |||||||||||||| || ||||||||||| |||||||| |||||||
Sbjct: 164 tgacaggcttgtacgagatggagaactctgcgaggtagtggccaatcatctccggcttga 105
Query: 482 tctcaacctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcag 541
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 104 tctcaacctggttgaaggtcttgccgttgtagacaccaacaatgctcccaatcatctcag 45
Query: 542 ggacaatgatcatgttacggagatgtgtcttgactggctc 581
| |||||||||||||| ||||| || ||||| || |||||
Sbjct: 44 gcacaatgatcatgttgcggaggtgggtcttcacaggctc 5
>gb|BG053588.1|BG053588 RHIZ2_11_B10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 389
Score = 252 bits (127), Expect = 5e-065
Identities = 190/211 (90%)
Strand = Plus / Minus
Query: 362 ctcatttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgct 421
|||| ||||||||||| |||||||| |||||||| ||||||||||||||||| || ||||
Sbjct: 211 ctcacttcagaggaatgaaccgcgaagagtgggtagcaccgataccgggcctaccgtgct 152
Query: 422 tgaccggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttga 481
|||| ||||| || || ||||||||||| || ||||||||||| |||||||| |||||||
Sbjct: 151 tgacaggcttgtacgaaatggagaactctgcgaggtagtggccaatcatctccggcttga 92
Query: 482 tctcaacctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcag 541
||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||
Sbjct: 91 tctcaacctggttgaaggtcttgccgttgtaaacaccaacaatgctcccaatcatctcag 32
Query: 542 ggacaatgatcatgttacggagatgtgtctt 572
| |||||||||||||| ||||| || |||||
Sbjct: 31 gcacaatgatcatgttgcggaggtgggtctt 1
>gb|CL197633.1|CL197633 104_424_10943868_116_32338_036 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10943868, DNA
sequence
Length = 642
Score = 244 bits (123), Expect = 1e-062
Identities = 147/155 (94%)
Strand = Plus / Plus
Query: 668 accttctcctggcgcgcgcggggaagagctggacgaggtcgtccgtggacatgtcgagaa 727
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 371 accttctcctggcgcgcgcggggaagagctggacgaggtcgtcggtggacatgtcgagca 430
Query: 728 gcgcatctaggtcgacgccgcggtagctgtacttgcggaacgtcctcttcttgggagcgc 787
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gcgcatcgaggtcgacgccacggtagctgtacttgcggaacgtcctcttcttgggagcgc 490
Query: 788 cggcggcaacctccggttcgacatcgacgtccgcc 822
||||||| ||||| || || |||||||||||||||
Sbjct: 491 cggcggcgacctcaggctccacatcgacgtccgcc 525
Score = 87.7 bits (44), Expect = 2e-015
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 612 cgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctggaacct 671
|||||||||||||||||||||||| ||||| || |||||||||| |||||||||||||||
Sbjct: 235 cgccttgcgcagcttcttgatgagcgccatcggtttcctcttcaaacccctctggaacct 294
>gb|CW246230.1|CW246230 104_707_11221254_148_35087_029 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11221254, DNA
sequence
Length = 763
Score = 244 bits (123), Expect = 1e-062
Identities = 147/155 (94%)
Strand = Plus / Plus
Query: 668 accttctcctggcgcgcgcggggaagagctggacgaggtcgtccgtggacatgtcgagaa 727
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 308 accttctcctggcgcgcgcggggaagagctggacgaggtcgtcggtggacatgtcgagca 367
Query: 728 gcgcatctaggtcgacgccgcggtagctgtacttgcggaacgtcctcttcttgggagcgc 787
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 gcgcatcgaggtcgacgccacggtagctgtacttgcggaacgtcctcttcttgggagcgc 427
Query: 788 cggcggcaacctccggttcgacatcgacgtccgcc 822
||||||| ||||| || || |||||||||||||||
Sbjct: 428 cggcggcgacctcaggctccacatcgacgtccgcc 462
Score = 87.7 bits (44), Expect = 2e-015
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 612 cgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctggaacct 671
|||||||||||||||||||||||| ||||| || |||||||||| |||||||||||||||
Sbjct: 172 cgccttgcgcagcttcttgatgagcgccatcggtttcctcttcaaacccctctggaacct 231
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 268,867
Number of Sequences: 832831
Number of extensions: 268867
Number of successful extensions: 79392
Number of sequences better than 0.5: 98
Number of HSP's better than 0.5 without gapping: 98
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79157
Number of HSP's gapped (non-prelim): 158
length of query: 911
length of database: 491,359,669
effective HSP length: 20
effective length of query: 891
effective length of database: 474,703,049
effective search space: 422960416659
effective search space used: 422960416659
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)