BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.405
(1589 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CX607004.1|CX607004 ANR1_6_D08.b1_A002 Anaerobic roots S... 1066 0.0
gb|CX609876.1|CX609876 ANR1_15_F10.b1_A002 Anaerobic roots ... 1029 0.0
gb|CN130256.1|CN130256 RHOH1_40_F09.b1_A002 Acid- and alkal... 1027 0.0
gb|CF485874.1|CF485874 POL1_34_F04.b1_A002 Pollen Sorghum b... 1021 0.0
gb|BF588045.1|BF588045 FM1_37_A09.b1_A003 Floral-Induced Me... 844 0.0
gb|CF484164.1|CF484164 POL1_3_C06.g1_A002 Pollen Sorghum bi... 817 0.0
gb|AW679762.1|AW679762 WS1_31_H09.g1_A002 Water-stressed 1 ... 801 0.0
gb|BG649248.1|BG649248 EM1_79_C06.g1_A002 Embryo 1 (EM1) So... 787 0.0
gb|BF422088.1|BF422088 FM1_12_G04.g1_A003 Floral-Induced Me... 751 0.0
gb|AW285949.2|AW285949 LG1_255_C11.b1_A002 Light Grown 1 (L... 747 0.0
gb|CD226624.1|CD226624 CCC1_47_G03.b1_A007 Callus culture/c... 743 0.0
gb|BG355976.2|BG355976 EM1_18_H07.g1_A002 Embryo 1 (EM1) So... 741 0.0
gb|CF480057.1|CF480057 POL1_63_B03.g1_A002 Pollen Sorghum b... 737 0.0
gb|CD205454.1|CD205454 HS1_14_A05.b1_A012 Heat-shocked seed... 735 0.0
gb|BF587947.1|BF587947 FM1_34_H03.g1_A003 Floral-Induced Me... 733 0.0
gb|CF484090.1|CF484090 POL1_3_C06.b1_A002 Pollen Sorghum bi... 726 0.0
gb|CF761339.1|CF761339 DSAF1_74_A02.b1_A011 Drought-stresse... 726 0.0
gb|BF481075.1|BF481075 FM1_16_B02.b1_A003 Floral-Induced Me... 680 0.0
gb|BG049474.1|BG049474 OV1_20_D11.g1_A002 Ovary 1 (OV1) Sor... 676 0.0
gb|CF432814.1|CF432814 NIT1_19_B12.b1_A002 Nitrogen-deficie... 658 0.0
gb|CF483395.1|CF483395 POL1_22_A07.b1_A002 Pollen Sorghum b... 658 0.0
gb|BG240308.1|BG240308 OV1_20_D11.b1_A002 Ovary 1 (OV1) Sor... 585 e-165
gb|CF485244.1|CF485244 POL1_30_G09.b1_A002 Pollen Sorghum b... 581 e-164
gb|AW923529.1|AW923529 DG1_52_E01.g1_A002 Dark Grown 1 (DG1... 579 e-163
gb|CD228712.1|CD228712 CCC1_9_A11.b1_A007 Callus culture/ce... 563 e-158
gb|BF480940.1|BF480940 FM1_15_C06.g1_A003 Floral-Induced Me... 549 e-154
gb|CF757788.1|CF757788 DSAF1_22_C10.g1_A011 Drought-stresse... 533 e-149
gb|BG558916.1|BG558916 RHIZ2_52_C09.g1_A003 Rhizome2 (RHIZ2... 525 e-147
gb|CF428259.1|CF428259 PH1_14_C06.b1_A002 Phosphorous-defic... 521 e-146
gb|CF486158.1|CF486158 POL1_36_C07.b1_A002 Pollen Sorghum b... 519 e-145
gb|BF421745.1|BF421745 FM1_16_B02.g1_A003 Floral-Induced Me... 515 e-144
gb|BG558575.1|BG558575 RHIZ2_57_F03.g1_A003 Rhizome2 (RHIZ2... 504 e-140
gb|CF760939.1|CF760939 DSAF1_68_H04.b1_A011 Drought-stresse... 496 e-138
gb|CX609958.1|CX609958 ANR1_15_F10.g1_A002 Anaerobic roots ... 496 e-138
gb|CF479978.1|CF479978 POL1_63_B03.b1_A002 Pollen Sorghum b... 488 e-136
gb|CN130330.1|CN130330 RHOH1_40_F09.g1_A002 Acid- and alkal... 464 e-128
gb|CX607089.1|CX607089 ANR1_6_D08.g1_A002 Anaerobic roots S... 462 e-128
gb|CD228805.1|CD228805 CCC1_10_H10.b1_A007 Callus culture/c... 446 e-123
gb|CF772149.1|CF772149 DSBF1_30_A07.g1_A010 Drought-stresse... 391 e-106
gb|BG464793.1|BG464793 EM1_34_C06.g1_A002 Embryo 1 (EM1) So... 363 3e-098
gb|CL150917.1|CL150917 104_333_10778874_114_31359_042 Sorgh... 351 1e-094
gb|BG557140.1|BG557140 EM1_43_B01.g1_A002 Embryo 1 (EM1) So... 339 5e-091
gb|CX620023.1|CX620023 GABR1_49_H09.b1_A002 GA- or brassino... 329 5e-088
gb|CL151033.1|CL151033 104_333_10778955_114_31359_123 Sorgh... 315 7e-084
gb|CF428344.1|CF428344 PH1_14_C06.g1_A002 Phosphorous-defic... 291 1e-076
gb|CF761443.1|CF761443 DSAF1_75_C05.b1_A011 Drought-stresse... 289 4e-076
gb|AW286539.1|AW286539 LG1_334_B07.g1_A002 Light Grown 1 (L... 283 2e-074
gb|CL151034.1|CL151034 104_333_10778955_116_31360_123 Sorgh... 278 2e-072
gb|CL150918.1|CL150918 104_333_10778874_116_31360_042 Sorgh... 260 4e-067
gb|CN140907.1|CN140907 OX1_47_H11.g1_A002 Oxidatively-stres... 228 1e-057
gb|CF760313.1|CF760313 DSAF1_58_D01.b1_A011 Drought-stresse... 224 2e-056
gb|CD462841.1|CD462841 ETH1_40_C12.g2_A002 Ethylene-treated... 210 3e-052
gb|CN140003.1|CN140003 OX1_33_A06.g1_A002 Oxidatively-stres... 210 3e-052
gb|CN137652.1|CN137652 OX1_58_E05.g1_A002 Oxidatively-stres... 202 7e-050
gb|CD233971.1|CD233971 SS1_5_A05.g1_A012 Salt-stressed seed... 196 4e-048
gb|CN125984.1|CN125984 RHOH1_14_B06.g1_A002 Acid- and alkal... 196 4e-048
gb|BG488301.1|BG488301 RHIZ2_61_H08.b1_A003 Rhizome2 (RHIZ2... 194 2e-047
gb|CN124745.1|CN124745 RHOH1_6_D09.g1_A002 Acid- and alkali... 194 2e-047
gb|CN129658.1|CN129658 RHOH1_36_D10.g1_A002 Acid- and alkal... 194 2e-047
gb|BE601008.1|BE601008 PI1_95_G08.b1_A002 Pathogen induced ... 186 4e-045
gb|CN151446.1|CN151446 WOUND1_75_B06.g1_A002 Wounded leaves... 184 2e-044
gb|BG558789.1|BG558789 RHIZ2_56_F01.b1_A003 Rhizome2 (RHIZ2... 178 1e-042
gb|CD228909.1|CD228909 CCC1_10_H10.g1_A007 Callus culture/c... 178 1e-042
gb|BG947965.1|BG947965 IP1_7_F10.b1_A002 Immature pannicle ... 168 1e-039
gb|AW924717.1|AW924717 WS1_71_A04.b1_A002 Water-stressed 1 ... 167 4e-039
gb|BG159657.1|BG159657 OV2_7_D10.b1_A002 Ovary 2 (OV2) Sorg... 167 4e-039
gb|BG322709.1|BG322709 EM1_13_C11.b1_A002 Embryo 1 (EM1) So... 167 4e-039
gb|BM325055.1|BM325055 PIC1_39_B12.b1_A002 Pathogen-infecte... 167 4e-039
gb|BM326323.1|BM326323 PIC1_55_F01.b1_A002 Pathogen-infecte... 167 4e-039
gb|CN128178.1|CN128178 RHOH1_27_B12.g1_A002 Acid- and alkal... 167 4e-039
gb|CN140004.1|CN140004 OX1_33_A07.g1_A002 Oxidatively-stres... 167 4e-039
gb|CX606929.1|CX606929 ANR1_5_F02.g1_A002 Anaerobic roots S... 167 4e-039
gb|CX621522.1|CX621522 GABR1_58_C11.g1_A002 GA- or brassino... 167 4e-039
gb|CX622028.1|CX622028 GABR1_61_C12.g2_A002 GA- or brassino... 167 4e-039
gb|CN129301.1|CN129301 RHOH1_34_D08.g1_A002 Acid- and alkal... 163 6e-038
gb|CN138057.1|CN138057 OX1_61_A05.g1_A002 Oxidatively-stres... 163 6e-038
gb|CN139358.1|CN139358 OX1_21_C09.g1_A002 Oxidatively-stres... 163 6e-038
gb|CN140628.1|CN140628 OX1_45_C12.g1_A002 Oxidatively-stres... 163 6e-038
gb|CX617438.1|CX617438 GABR1_33_F04.g1_A002 GA- or brassino... 163 6e-038
gb|CX621691.1|CX621691 GABR1_59_D02.g1_A002 GA- or brassino... 163 6e-038
gb|BG411503.1|BG411503 EM1_59_F08.g1_A002 Embryo 1 (EM1) So... 161 2e-037
gb|CX614980.1|CX614980 GABR1_17_A09.g1_A002 GA- or brassino... 161 2e-037
gb|BF587369.1|BF587369 FM1_35_E07.b1_A003 Floral-Induced Me... 159 1e-036
gb|BG050311.1|BG050311 FM1_53_D06.b1_A003 Floral-Induced Me... 159 1e-036
gb|CX617424.1|CX617424 GABR1_33_D12.g1_A002 GA- or brassino... 159 1e-036
gb|CX621009.1|CX621009 GABR1_55_A05.g1_A002 GA- or brassino... 159 1e-036
gb|CD428100.1|CD428100 ETH1_32_G07.g1_A002 Ethylene-treated... 155 2e-035
gb|CF487295.1|CF487295 POL1_42_H10.g1_A002 Pollen Sorghum b... 155 2e-035
gb|CN126154.1|CN126154 RHOH1_15_A12.g1_A002 Acid- and alkal... 155 2e-035
gb|CF480064.1|CF480064 POL1_63_B11.g1_A002 Pollen Sorghum b... 153 6e-035
gb|CD428444.1|CD428444 ETH1_31_C11.g1_A002 Ethylene-treated... 149 9e-034
gb|CF430471.1|CF430471 PH1_28_A06.g1_A002 Phosphorous-defic... 149 9e-034
gb|CF433519.1|CF433519 NIT1_27_G05.g1_A002 Nitrogen-deficie... 149 9e-034
gb|DR831565.2|DR831565 MM75 Sorghum bicolor greenbug-respon... 149 9e-034
gb|CD228725.1|CD228725 CCC1_9_A11.g1_A007 Callus culture/ce... 147 4e-033
gb|CD432251.1|CD432251 ETH1_26_H06.g1_A002 Ethylene-treated... 147 4e-033
gb|BG556983.1|BG556983 EM1_41_B01.g1_A002 Embryo 1 (EM1) So... 141 2e-031
gb|AW285009.1|AW285009 LG1_297_B09.g1_A002 Light Grown 1 (L... 137 4e-030
gb|AW672173.1|AW672173 LG1_357_A11.g1_A002 Light Grown 1 (L... 137 4e-030
gb|BE598431.1|BE598431 PI1_82_F03.g1_A002 Pathogen induced ... 137 4e-030
gb|BM329801.1|BM329801 PIC1_43_E03.g1_A002 Pathogen-infecte... 137 4e-030
gb|CD230241.1|CD230241 SS1_42_C10.b1_A012 Salt-stressed see... 137 4e-030
gb|CN140827.1|CN140827 OX1_47_H11.b1_A002 Oxidatively-stres... 135 1e-029
gb|BF480858.1|BF480858 FM1_14_B11.g1_A003 Floral-Induced Me... 133 6e-029
gb|BF587799.1|BF587799 FM1_40_F10.g1_A003 Floral-Induced Me... 133 6e-029
gb|BF588005.1|BF588005 FM1_35_E07.g1_A003 Floral-Induced Me... 133 6e-029
gb|BF588353.1|BF588353 FM1_40_F10.b1_A003 Floral-Induced Me... 133 6e-029
gb|BG102584.1|BG102584 RHIZ2_34_G12.g1_A003 Rhizome2 (RHIZ2... 133 6e-029
gb|BG488001.1|BG488001 RHIZ2_61_H08.g1_A003 Rhizome2 (RHIZ2... 133 6e-029
gb|BG559829.1|BG559829 RHIZ2_74_B06.g1_A003 Rhizome2 (RHIZ2... 133 6e-029
gb|BQ656170.1|BQ656170 pRC1191 Sorghum halepense rhizome cD... 133 6e-029
gb|CD234065.1|CD234065 SS1_6_B11.b1_A012 Salt-stressed seed... 133 6e-029
gb|CN129567.1|CN129567 RHOH1_36_D10.b3_A002 Acid- and alkal... 133 6e-029
gb|BG158793.1|BG158793 RHIZ2_44_D06.b1_A003 Rhizome2 (RHIZ2... 129 9e-028
gb|BE363777.1|BE363777 WS1_71_A04.g2_A002 Water-stressed 1 ... 125 1e-026
gb|BE366758.1|BE366758 PI1_3_G04.g1_A002 Pathogen induced 1... 125 1e-026
gb|BE601268.1|BE601268 PI1_90_H10.g1_A002 Pathogen induced ... 125 1e-026
gb|BE601357.1|BE601357 PI1_91_H12.g1_A002 Pathogen induced ... 125 1e-026
gb|BF176979.1|BF176979 EM1_2_A12.g1_A002 Embryo 1 (EM1) Sor... 125 1e-026
gb|BF177022.1|BF177022 EM1_2_E12.g1_A002 Embryo 1 (EM1) Sor... 125 1e-026
gb|BF587072.1|BF587072 FM1_32_H07.g1_A003 Floral-Induced Me... 125 1e-026
gb|BF656870.1|BF656870 OV2_22_A07.g1_A002 Ovary 2 (OV2) Sor... 125 1e-026
gb|BG049508.1|BG049508 OV1_20_H06.g1_A002 Ovary 1 (OV1) Sor... 125 1e-026
gb|BG159403.1|BG159403 OV2_7_D10.g1_A002 Ovary 2 (OV2) Sorg... 125 1e-026
gb|BG322968.1|BG322968 EM1_13_C11.g1_A002 Embryo 1 (EM1) So... 125 1e-026
gb|BG323124.1|BG323124 EM1_15_B09.g1_A002 Embryo 1 (EM1) So... 125 1e-026
gb|BG323175.1|BG323175 EM1_15_G07.g1_A002 Embryo 1 (EM1) So... 125 1e-026
gb|BG355881.1|BG355881 EM1_17_G11.g1_A002 Embryo 1 (EM1) So... 125 1e-026
gb|BG356333.1|BG356333 EM1_21_C04.g1_A002 Embryo 1 (EM1) So... 125 1e-026
gb|BG356858.1|BG356858 OV2_10_H05.g1_A002 Ovary 2 (OV2) Sor... 125 1e-026
gb|BG410767.1|BG410767 EM1_25_E07.g1_A002 Embryo 1 (EM1) So... 125 1e-026
gb|BG411530.1|BG411530 EM1_57_C04.b1_A002 Embryo 1 (EM1) So... 125 1e-026
gb|BG463386.1|BG463386 EM1_48_H04.g1_A002 Embryo 1 (EM1) So... 125 1e-026
gb|BG556461.1|BG556461 EM1_37_D11.g1_A002 Embryo 1 (EM1) So... 125 1e-026
gb|BG557193.1|BG557193 EM1_43_G10.g1_A002 Embryo 1 (EM1) So... 125 1e-026
gb|BG557607.1|BG557607 EM1_53_H08.g1_A002 Embryo 1 (EM1) So... 125 1e-026
gb|BG557736.1|BG557736 EM1_56_C09.g1_A002 Embryo 1 (EM1) So... 125 1e-026
gb|BG557831.1|BG557831 EM1_53_H08.b1_A002 Embryo 1 (EM1) So... 125 1e-026
gb|BG649226.1|BG649226 EM1_78_G09.g1_A002 Embryo 1 (EM1) So... 125 1e-026
gb|BI211600.1|BI211600 IP1_59_E12.g1_A002 Immature pannicle... 125 1e-026
gb|BM318254.1|BM318254 PI1_80_C11.g9_A002 Pathogen induced ... 125 1e-026
gb|BM326695.1|BM326695 PIC1_1_D11.g1_A002 Pathogen-infected... 125 1e-026
gb|BM326820.1|BM326820 PIC1_3_C11.g1_A002 Pathogen-infected... 125 1e-026
gb|BM329039.1|BM329039 PIC1_32_F05.g1_A002 Pathogen-infecte... 125 1e-026
gb|BM329153.1|BM329153 PIC1_34_A08.g1_A002 Pathogen-infecte... 125 1e-026
gb|CD220081.1|CD220081 CCC1_65_D03.b1_A007 Callus culture/c... 125 1e-026
gb|CD223655.1|CD223655 CCC1_29_A07.b1_A007 Callus culture/c... 125 1e-026
gb|CD225414.1|CD225414 CCC1_3_D12.b1_A007 Callus culture/ce... 125 1e-026
gb|CD227250.1|CD227250 CCC1_50_C05.b1_A007 Callus culture/c... 125 1e-026
gb|CD227836.1|CD227836 CCC1_56_A12.b1_A007 Callus culture/c... 125 1e-026
gb|CD228713.1|CD228713 CCC1_9_E07.b1_A007 Callus culture/ce... 125 1e-026
gb|CD229133.1|CD229133 CCC1_13_F03.b1_A007 Callus culture/c... 125 1e-026
gb|CD427997.1|CD427997 ETH1_32_G07.b1_A002 Ethylene-treated... 125 1e-026
gb|CD428339.1|CD428339 ETH1_31_C11.b1_A002 Ethylene-treated... 125 1e-026
gb|CD429725.1|CD429725 ETH1_15_F09.b1_A002 Ethylene-treated... 125 1e-026
gb|CD429771.1|CD429771 ETH1_15_F09.g1_A002 Ethylene-treated... 125 1e-026
gb|CD432150.1|CD432150 ETH1_26_H06.b1_A002 Ethylene-treated... 125 1e-026
gb|CD462761.1|CD462761 ETH1_40_C12.b1_A002 Ethylene-treated... 125 1e-026
gb|CD463396.1|CD463396 ETH1_44_F07.b1_A002 Ethylene-treated... 125 1e-026
gb|CF430418.1|CF430418 PH1_28_A06.b1_A002 Phosphorous-defic... 125 1e-026
gb|CF482294.1|CF482294 POL1_6_C09.b1_A002 Pollen Sorghum bi... 125 1e-026
gb|CF483402.1|CF483402 POL1_22_B10.b1_A002 Pollen Sorghum b... 125 1e-026
gb|CF484565.1|CF484565 POL1_26_C09.b1_A002 Pollen Sorghum b... 125 1e-026
gb|CF484739.1|CF484739 POL1_27_E06.b1_A002 Pollen Sorghum b... 125 1e-026
gb|CN124659.1|CN124659 RHOH1_6_D09.b1_A002 Acid- and alkali... 125 1e-026
gb|CN126070.1|CN126070 RHOH1_15_A12.b1_A002 Acid- and alkal... 125 1e-026
gb|CN128105.1|CN128105 RHOH1_27_B12.b1_A002 Acid- and alkal... 125 1e-026
gb|CN129213.1|CN129213 RHOH1_34_D08.b3_A002 Acid- and alkal... 125 1e-026
gb|CN132778.1|CN132778 OX1_8_D11.b1_A002 Oxidatively-stress... 125 1e-026
gb|CN134367.1|CN134367 OX1_26_A06.b1_A002 Oxidatively-stres... 125 1e-026
gb|CN135158.1|CN135158 OX1_31_A07.b1_A002 Oxidatively-stres... 125 1e-026
gb|CN137970.1|CN137970 OX1_61_A05.b1_A002 Oxidatively-stres... 125 1e-026
gb|CN139919.1|CN139919 OX1_33_A06.b1_A002 Oxidatively-stres... 125 1e-026
gb|CN139920.1|CN139920 OX1_33_A07.b1_A002 Oxidatively-stres... 125 1e-026
gb|CN151363.1|CN151363 WOUND1_75_B06.b1_A002 Wounded leaves... 125 1e-026
gb|CN151847.1|CN151847 WOUND1_78_C04.b1_A002 Wounded leaves... 125 1e-026
gb|CX606837.1|CX606837 ANR1_5_F02.b1_A002 Anaerobic roots S... 125 1e-026
gb|CX608734.1|CX608734 ANR1_40_H10.b1_A002 Anaerobic roots ... 125 1e-026
gb|CX610883.1|CX610883 ANR1_21_H06.b1_A002 Anaerobic roots ... 125 1e-026
gb|CX614892.1|CX614892 GABR1_17_A09.b1_A002 GA- or brassino... 125 1e-026
gb|CX617340.1|CX617340 GABR1_33_D12.b1_A002 GA- or brassino... 125 1e-026
gb|CX617351.1|CX617351 GABR1_33_F04.b1_A002 GA- or brassino... 125 1e-026
gb|CX621437.1|CX621437 GABR1_58_C11.b1_A002 GA- or brassino... 125 1e-026
gb|CX621609.1|CX621609 GABR1_59_D02.b1_A002 GA- or brassino... 125 1e-026
gb|BF421280.1|BF421280 FM1_7_G03.g1_A003 Floral-Induced Mer... 121 2e-025
gb|BG050382.1|BG050382 FM1_53_D06.g1_A003 Floral-Induced Me... 121 2e-025
gb|BG558608.1|BG558608 RHIZ2_58_A10.g1_A003 Rhizome2 (RHIZ2... 121 2e-025
gb|BG559837.1|BG559837 RHIZ2_74_C02.g1_A003 Rhizome2 (RHIZ2... 121 2e-025
gb|CN134449.1|CN134449 OX1_26_A06.g1_A002 Oxidatively-stres... 121 2e-025
gb|CD220421.1|CD220421 CCC1_67_D08.b1_A007 Callus culture/c... 119 8e-025
gb|CD233950.1|CD233950 SS1_5_A05.b1_A012 Salt-stressed seed... 119 8e-025
gb|CF071999.1|CF071999 FE1_20_H01.b1_A002 Iron-deficient se... 119 8e-025
gb|BF587604.1|BF587604 FM1_38_E05.g1_A003 Floral-Induced Me... 117 3e-024
gb|CD221481.1|CD221481 CCC1_55_E03.b1_A007 Callus culture/c... 117 3e-024
gb|CD234631.1|CD234631 SS1_17_E12.b1_A012 Salt-stressed see... 117 3e-024
gb|CN132860.1|CN132860 OX1_8_D11.g1_A002 Oxidatively-stress... 117 3e-024
gb|CN142915.1|CN142915 WOUND1_13_C08.b1_A002 Wounded leaves... 117 3e-024
gb|BF587488.1|BF587488 FM1_37_A09.g1_A003 Floral-Induced Me... 115 1e-023
gb|BG241504.1|BG241504 RHIZ2_50_B05.g1_A003 Rhizome2 (RHIZ2... 115 1e-023
gb|BG411376.1|BG411376 EM1_57_C04.g1_A002 Embryo 1 (EM1) So... 115 1e-023
gb|BG556431.1|BG556431 EM1_37_A04.g1_A002 Embryo 1 (EM1) So... 115 1e-023
gb|BG557578.1|BG557578 EM1_53_D07.g1_A002 Embryo 1 (EM1) So... 115 1e-023
gb|BM326691.1|BM326691 PIC1_1_C11.g1_A002 Pathogen-infected... 115 1e-023
gb|BM326692.1|BM326692 PIC1_1_C12.g1_A002 Pathogen-infected... 115 1e-023
gb|BM326818.1|BM326818 PIC1_3_C09.g1_A002 Pathogen-infected... 115 1e-023
gb|BM326821.1|BM326821 PIC1_3_C12.g1_A002 Pathogen-infected... 115 1e-023
gb|CD432808.1|CD432808 ETH1_33_A04.b1_A002 Ethylene-treated... 115 1e-023
gb|CF433468.1|CF433468 NIT1_27_G05.b1_A002 Nitrogen-deficie... 115 1e-023
gb|CF480699.1|CF480699 POL1_67_H03.b1_A002 Pollen Sorghum b... 115 1e-023
gb|CW484627.1|CW484627 fsbb001f246n24f0 Sorghum methylation... 113 5e-023
gb|BG463627.1|BG463627 EM1_50_A03.g1_A002 Embryo 1 (EM1) So... 113 5e-023
gb|CD203865.1|CD203865 HS1_2_G02.b1_A012 Heat-shocked seedl... 113 5e-023
gb|CD207108.1|CD207108 HS1_27_C01.b1_A012 Heat-shocked seed... 113 5e-023
gb|CD233466.1|CD233466 SS1_2_A10.b1_A012 Salt-stressed seed... 113 5e-023
gb|CF072517.1|CF072517 FE1_3_F12.b1_A002 Iron-deficient see... 113 5e-023
gb|CF427382.1|CF427382 PH1_1_E05.b1_A002 Phosphorous-defici... 113 5e-023
gb|CF428271.1|CF428271 PH1_14_G09.b1_A002 Phosphorous-defic... 113 5e-023
gb|CF429576.1|CF429576 PH1_23_H02.b1_A002 Phosphorous-defic... 113 5e-023
gb|CF487205.1|CF487205 POL1_42_H10.b1_A002 Pollen Sorghum b... 113 5e-023
gb|BM328493.1|BM328493 PIC1_29_H05.g1_A002 Pathogen-infecte... 111 2e-022
gb|CF480788.1|CF480788 POL1_67_H03.g1_A002 Pollen Sorghum b... 111 2e-022
gb|BG948132.1|BG948132 IP1_9_G12.g1_A002 Immature pannicle ... 109 8e-022
gb|BM330718.1|BM330718 PIC1_55_F01.g1_A002 Pathogen-infecte... 109 8e-022
gb|CF483394.1|CF483394 POL1_22_A06.b1_A002 Pollen Sorghum b... 109 8e-022
gb|BF422079.1|BF422079 FM1_12_F06.g1_A003 Floral-Induced Me... 107 3e-021
gb|BM326817.1|BM326817 PIC1_3_C08.g1_A002 Pathogen-infected... 107 3e-021
gb|CD230128.1|CD230128 SS1_41_E06.b1_A012 Salt-stressed see... 107 3e-021
gb|CD230252.1|CD230252 SS1_42_D04.b1_A012 Salt-stressed see... 107 3e-021
gb|CD233310.1|CD233310 SS1_13_A12.b1_A012 Salt-stressed see... 107 3e-021
gb|CF485325.1|CF485325 POL1_30_G09.g1_A002 Pollen Sorghum b... 107 3e-021
gb|BZ340608.1|BZ340608 ic39h08.b1 WGS-SbicolorF (JM107 adap... 105 1e-020
gb|CN125896.1|CN125896 RHOH1_14_B06.b1_A002 Acid- and alkal... 103 5e-020
gb|BG463802.1|BG463802 EM1_51_B01.g1_A002 Embryo 1 (EM1) So... 101 2e-019
gb|BM326696.1|BM326696 PIC1_1_D12.g1_A002 Pathogen-infected... 101 2e-019
gb|CN139275.1|CN139275 OX1_21_C09.b1_A002 Oxidatively-stres... 101 2e-019
gb|CW366102.1|CW366102 fsbb001f038p02f0 Sorghum methylation... 98 3e-018
gb|CD233514.1|CD233514 SS1_2_F02.g1_A012 Salt-stressed seed... 98 3e-018
gb|CX616116.1|CX616116 GABR1_25_H11.g1_A002 GA- or brassino... 98 3e-018
gb|BG159380.1|BG159380 OV2_7_B03.g1_A002 Ovary 2 (OV2) Sorg... 96 1e-017
gb|BM331067.1|BM331067 PIC1_69_B11.g1_A002 Pathogen-infecte... 96 1e-017
gb|CD233403.1|CD233403 SS1_13_A12.g1_A012 Salt-stressed see... 96 1e-017
gb|BG412366.1|BG412366 OV2_33_B01.g1_A002 Ovary 2 (OV2) Sor... 94 5e-017
gb|CD223682.1|CD223682 CCC1_29_A07.g1_A007 Callus culture/c... 94 5e-017
gb|CN137573.1|CN137573 OX1_58_E05.b1_A002 Oxidatively-stres... 94 5e-017
gb|BG158723.1|BG158723 RHIZ2_44_D06.g1_A003 Rhizome2 (RHIZ2... 92 2e-016
gb|BF586364.1|BF586364 FM1_28_A02.g1_A003 Floral-Induced Me... 90 7e-016
gb|BG464744.1|BG464744 EM1_33_E04.g1_A002 Embryo 1 (EM1) So... 86 1e-014
gb|AW284540.1|AW284540 LG1_270_D06.g1_A002 Light Grown 1 (L... 84 5e-014
gb|BG465837.1|BG465837 RHIZ2_45_B09.g1_A003 Rhizome2 (RHIZ2... 84 5e-014
gb|CF482375.1|CF482375 POL1_6_C09.g1_A002 Pollen Sorghum bi... 84 5e-014
gb|CW305325.1|CW305325 104_790_11466255_116_35700_054 Sorgh... 82 2e-013
gb|BE592141.1|BE592141 WS1_89_A02.g1_A002 Water-stressed 1 ... 80 7e-013
gb|BG464859.1|BG464859 EM1_35_C08.g1_A002 Embryo 1 (EM1) So... 80 7e-013
gb|BG053530.1|BG053530 RHIZ2_10_D01.g1_A003 Rhizome2 (RHIZ2... 78 3e-012
gb|BG103665.1|BG103665 RHIZ2_39_D01.g1_A003 Rhizome2 (RHIZ2... 78 3e-012
gb|CD234720.1|CD234720 SS1_17_B03.g1_A012 Salt-stressed see... 78 3e-012
gb|CF431721.1|CF431721 NIT1_10_C05.b1_A002 Nitrogen-deficie... 78 3e-012
gb|CX616025.1|CX616025 GABR1_25_H11.b1_A002 GA- or brassino... 78 3e-012
gb|CX620931.1|CX620931 GABR1_55_A05.b1_A002 GA- or brassino... 78 3e-012
gb|BE367528.1|BE367528 PI1_8_E12.g1_A002 Pathogen induced 1... 76 1e-011
gb|CD233577.1|CD233577 SS1_2_A10.g1_A012 Salt-stressed seed... 74 4e-011
gb|CX621943.1|CX621943 GABR1_61_C12.b2_A002 GA- or brassino... 74 4e-011
gb|CF485948.1|CF485948 POL1_34_F04.g1_A002 Pollen Sorghum b... 72 2e-010
gb|BG159373.1|BG159373 OV2_7_A04.g1_A002 Ovary 2 (OV2) Sorg... 70 7e-010
gb|BG464752.1|BG464752 EM1_33_F04.g1_A002 Embryo 1 (EM1) So... 70 7e-010
gb|BI351465.1|BI351465 IP1_72_A09.g1_A002 Immature pannicle... 70 7e-010
gb|BM323978.1|BM323978 PIC1_29_H05.b1_A002 Pathogen-infecte... 70 7e-010
gb|CD230872.1|CD230872 SS1_20_G02.b1_A012 Salt-stressed see... 70 7e-010
gb|CD233491.1|CD233491 SS1_2_F02.b1_A012 Salt-stressed seed... 70 7e-010
gb|BM326748.1|BM326748 PIC1_2_C02.g1_A002 Pathogen-infected... 68 3e-009
gb|AW283600.1|AW283600 LG1_242_A05.g1_A002 Light Grown 1 (L... 66 1e-008
gb|CD226715.1|CD226715 CCC1_47_G03.g1_A007 Callus culture/c... 64 4e-008
gb|CD229215.1|CD229215 CCC1_13_F03.g1_A007 Callus culture/c... 64 4e-008
gb|CF481187.1|CF481187 POL1_70_B03.g1_A002 Pollen Sorghum b... 64 4e-008
gb|DR831436.2|DR831436 MM67 Sorghum bicolor greenbug-respon... 64 4e-008
gb|CD220528.1|CD220528 CCC1_67_D08.g1_A007 Callus culture/c... 62 2e-007
gb|CW215010.1|CW215010 104_647_11194316_148_37463_078 Sorgh... 60 7e-007
gb|CW348155.1|CW348155 fsbb001f008g09f0 Sorghum methylation... 60 7e-007
gb|CW352891.1|CW352891 fsbb001f015g07k0 Sorghum methylation... 60 7e-007
gb|CW483538.1|CW483538 fsbb001f245d19k0 Sorghum methylation... 60 7e-007
gb|CD227347.1|CD227347 CCC1_50_C05.g1_A007 Callus culture/c... 60 7e-007
gb|CD228727.1|CD228727 CCC1_9_E07.g1_A007 Callus culture/ce... 60 7e-007
gb|CD229570.1|CD229570 CCC1_16_C04.g1_A007 Callus culture/c... 60 7e-007
gb|CF484932.1|CF484932 POL1_28_A08.g1_A002 Pollen Sorghum b... 60 7e-007
gb|CN125317.1|CN125317 RHOH1_10_H03.b1_A002 Acid- and alkal... 60 7e-007
gb|CN127991.1|CN127991 RHOH1_26_G07.b1_A002 Acid- and alkal... 60 7e-007
gb|CN128243.1|CN128243 RHOH1_28_C09.b1_A002 Acid- and alkal... 60 7e-007
gb|CN130096.1|CN130096 RHOH1_39_F08.b1_A002 Acid- and alkal... 60 7e-007
gb|CN135231.1|CN135231 OX1_31_A07.g1_A002 Oxidatively-stres... 60 7e-007
gb|CX619281.1|CX619281 GABR1_44_C05.g1_A002 GA- or brassino... 60 7e-007
gb|BG649425.1|BG649425 EM1_79_C06.b1_A002 Embryo 1 (EM1) So... 58 3e-006
gb|BG464768.1|BG464768 EM1_33_H08.g1_A002 Embryo 1 (EM1) So... 56 1e-005
gb|BI211348.1|BI211348 IP1_59_E12.b1_A002 Immature pannicle... 56 1e-005
gb|BM324551.1|BM324551 PIC1_32_F05.b1_A002 Pathogen-infecte... 56 1e-005
gb|CD234160.1|CD234160 SS1_6_B11.g1_A012 Salt-stressed seed... 56 1e-005
gb|CW068746.1|CW068746 104_317_10525286_1_30096 Sorghum met... 54 4e-005
gb|CD432818.1|CD432818 ETH1_33_A04.g1_A002 Ethylene-treated... 54 4e-005
gb|BE600734.1|BE600734 PI1_91_H12.b1_A002 Pathogen induced ... 52 2e-004
gb|BG411082.1|BG411082 EM1_25_E07.b1_A002 Embryo 1 (EM1) So... 52 2e-004
gb|BG465486.1|BG465486 RHIZ2_45_B09.b1_A003 Rhizome2 (RHIZ2... 52 2e-004
gb|BI351532.1|BI351532 IP1_72_A09.b1_A002 Immature pannicle... 52 2e-004
gb|BM322205.1|BM322205 PIC1_1_D11.b1_A002 Pathogen-infected... 52 2e-004
gb|CB928445.1|CB928445 ABA1_15_G07.g1_A012 Abscisic acid-tr... 52 2e-004
gb|CD227769.1|CD227769 CCC1_53_H01.g1_A007 Callus culture/c... 52 2e-004
gb|CD463456.1|CD463456 ETH1_44_F07.g1_A002 Ethylene-treated... 52 2e-004
gb|CF483463.1|CF483463 POL1_22_A06.g1_A002 Pollen Sorghum b... 52 2e-004
gb|CF483472.1|CF483472 POL1_22_B10.g1_A002 Pollen Sorghum b... 52 2e-004
gb|CF483795.1|CF483795 POL1_24_F01.g1_A002 Pollen Sorghum b... 52 2e-004
gb|CW483537.1|CW483537 fsbb001f245d19f0 Sorghum methylation... 50 6e-004
gb|BG355553.1|BG355553 EM1_17_G11.b1_A002 Embryo 1 (EM1) So... 50 6e-004
gb|BG556613.1|BG556613 EM1_37_D11.b1_A002 Embryo 1 (EM1) So... 50 6e-004
gb|BM322333.1|BM322333 PIC1_3_C09.b1_A002 Pathogen-infected... 50 6e-004
gb|CD203891.1|CD203891 HS1_2_G02.g1_A012 Heat-shocked seedl... 50 6e-004
gb|CD204359.1|CD204359 HS1_7_G06.g1_A012 Heat-shocked seedl... 50 6e-004
gb|CD225524.1|CD225524 CCC1_3_D12.g1_A007 Callus culture/ce... 50 6e-004
gb|CD463502.1|CD463502 ETH1_44_C11.g1_A002 Ethylene-treated... 50 6e-004
gb|CF428358.1|CF428358 PH1_14_G09.g1_A002 Phosphorous-defic... 50 6e-004
gb|CF484639.1|CF484639 POL1_26_C09.g1_A002 Pollen Sorghum b... 50 6e-004
gb|CF484819.1|CF484819 POL1_27_E06.g1_A002 Pollen Sorghum b... 50 6e-004
gb|CN125405.1|CN125405 RHOH1_10_H03.g1_A002 Acid- and alkal... 50 6e-004
gb|BG464706.1|BG464706 EM1_33_A01.g1_A002 Embryo 1 (EM1) So... 48 0.003
gb|BI141236.1|BI141236 IP1_53_A05.g1_A002 Immature pannicle... 48 0.003
gb|BI351124.1|BI351124 IP1_70_B09.g1_A002 Immature pannicle... 48 0.003
gb|BF177124.1|BF177124 EM1_2_A12.b1_A002 Embryo 1 (EM1) Sor... 46 0.010
gb|BG158724.1|BG158724 RHIZ2_44_D07.g1_A003 Rhizome2 (RHIZ2... 46 0.010
gb|CD220176.1|CD220176 CCC1_65_D03.g1_A007 Callus culture/c... 46 0.010
gb|CF428523.1|CF428523 PH1_15_A11.g1_A002 Phosphorous-defic... 46 0.010
gb|CN131244.1|CN131244 RHOH1_46_F06.g1_A002 Acid- and alkal... 46 0.010
gb|CX615807.1|CX615807 GABR1_23_A06.g1_A002 GA- or brassino... 46 0.010
gb|BE600644.1|BE600644 PI1_90_H10.b1_A002 Pathogen induced ... 44 0.039
gb|BM326869.1|BM326869 PIC1_4_B04.g1_A002 Pathogen-infected... 44 0.039
gb|CD221456.1|CD221456 CCC1_54_D10.g1_A007 Callus culture/c... 44 0.039
gb|BE598765.1|BE598765 PI1_82_F03.b1_A002 Pathogen induced ... 42 0.16
gb|BM322202.1|BM322202 PIC1_1_C12.b1_A002 Pathogen-infected... 42 0.16
>gb|CX607004.1|CX607004 ANR1_6_D08.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_D08_A002 3', mRNA sequence
Length = 786
Score = 1067 bits (538), Expect = 0.0
Identities = 688/733 (93%), Gaps = 10/733 (1%)
Strand = Plus / Minus
Query: 206 atttctaacgtcacttatttccaatctctgacataaaaagaggtgcggtcacagccacgc 265
|||||||||||||||||||||||||||| ||| |||||| | ||||||||||||||| |
Sbjct: 728 atttctaacgtcacttatttccaatctccgacgcaaaaagggatgcggtcacagccacac 669
Query: 266 tacaaac---tcaccagcctctgcgagagcgaa-cttaaaat-ggtgtcgagggtccgta 320
||||||| |||||| ||||||||||||| || |||||||| |||||| ||||||| ||
Sbjct: 668 tacaaacaactcaccaacctctgcgagagctaaacttaaaattggtgtccagggtccata 609
Query: 321 cgtatgtttacttaaaggaggcacctaaaacatcatgtttgttgttcgtcgtcatcatca 380
|||||||| ||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct: 608 cgtatgtta--ttaaagg---cacctaaaacatcatgtttgttgttcgtcatcgtcatca 554
Query: 381 ttatacatccttagccaccaccagacccgtacttcttgccgaagacaaccacctggagct 440
| ||| |||||||||| ||||||||||| |||| |||||||||||| | |||||||||||
Sbjct: 553 taatatatccttagccgccaccagacccatactccttgccgaagacgatcacctggagct 494
Query: 441 tgtcgtacccagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcac 500
||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||
Sbjct: 493 tgtcgtacccagcaaggacaccagcaccagcaacagcacggaggatgtttgccccagcac 434
Query: 501 ccttgaagagggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagc 560
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 433 ccttgaagagggacttggtaccctcctttgcaacaatctgcttgaaagcatccaaggagc 374
Query: 561 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatgg 620
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 373 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtatcaatgg 314
Query: 621 ggtaggaggcaaggccagcaccaatggttataccccacccgagcaagaagctggctaaga 680
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 313 ggtaagaggcaaggccagcaccaatggttataccccagccgagcaagaagctggctaaga 254
Query: 681 agttatcctgcagggtaccaacaagaagcactggcttcagggagtcatacataccaaagt 740
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 agttgtcctgcagggtaccaacaagaagcactggcttcagggagtcatacataccaaagt 194
Query: 741 aaagacctcggtacacaatgatccccacacaagatatattgaatccacggtagaggccac 800
|||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |
Sbjct: 193 aaagacctcggtacacaatgattcccacacaagagatattgaatccacggtagaggccgc 134
Query: 801 gaataccatcactggcaagggtcttgcggtaaacatcaacgagtccattgaactgcctct 860
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 133 gaataccatcactggcaagggtcttgcggtaaacatcaacaagtccattgaactgcctct 74
Query: 861 caccacccttctttgcagccttggcatcattggccaaacgcgtacgggcgtagtccagag 920
|||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 73 caccacccttctttgcagccttggcatcattggccaaacgtgtacgagcgtagtccagag 14
Query: 921 aatagacaaagaa 933
|||||||||||||
Sbjct: 13 aatagacaaagaa 1
Score = 48.1 bits (24), Expect = 0.003
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 148 ataaaaaactgatgcagcaaaagcgtctaccc 179
|||||||||||||||||| ||| |||||||||
Sbjct: 776 ataaaaaactgatgcagccaaatcgtctaccc 745
>gb|CX609876.1|CX609876 ANR1_15_F10.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_15_F10_A002 3', mRNA sequence
Length = 805
Score = 1029 bits (519), Expect = 0.0
Identities = 663/706 (93%), Gaps = 10/706 (1%)
Strand = Plus / Minus
Query: 206 atttctaacgtcacttatttccaatctctgacataaaaagaggtgcggtcacagccacgc 265
|||||||||||||||||||||||||||| ||| |||||| | ||||||||||||||| |
Sbjct: 701 atttctaacgtcacttatttccaatctccgacgcaaaaagggatgcggtcacagccacac 642
Query: 266 tacaaac---tcaccagcctctgcgagagcgaa-cttaaaat-ggtgtcgagggtccgta 320
||||||| |||||| ||||||||||||| || |||||||| |||||| ||||||| ||
Sbjct: 641 tacaaacaactcaccaacctctgcgagagctaaacttaaaattggtgtccagggtccata 582
Query: 321 cgtatgtttacttaaaggaggcacctaaaacatcatgtttgttgttcgtcgtcatcatca 380
|||||||| ||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct: 581 cgtatgtta--ttaaagg---cacctaaaacatcatgtttgttgttcgtcatcgtcatca 527
Query: 381 ttatacatccttagccaccaccagacccgtacttcttgccgaagacaaccacctggagct 440
| ||| |||||||||| ||||||||||| ||||||||||||||||| | |||||||||||
Sbjct: 526 taatatatccttagccgccaccagacccatacttcttgccgaagacgatcacctggagct 467
Query: 441 tgtcgtacccagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcac 500
||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||
Sbjct: 466 tgtcgtacccagcaaggacaccagcaccagcaacagcacggaggatgtttgccccagcac 407
Query: 501 ccttgaagagggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagc 560
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 406 ccttgaagagggacttggtaccctcctttgcaacaatctgcttgaaagcatccaaggagc 347
Query: 561 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatgg 620
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 346 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtatcaatgg 287
Query: 621 ggtaggaggcaaggccagcaccaatggttataccccacccgagcaagaagctggctaaga 680
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 286 ggtaagaggcaaggccagcaccaatggttataccccagccgagcaagaagctggctaaga 227
Query: 681 agttatcctgcagggtaccaacaagaagcactggcttcagggagtcatacataccaaagt 740
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 agttgtcctgcagggtaccaacaagaagcactggcttcagggagtcatacataccaaagt 167
Query: 741 aaagacctcggtacacaatgatccccacacaagatatattgaatccacggtagaggccac 800
|||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |
Sbjct: 166 aaagacctcggtacacaatgattcccacacaagagatattgaatccacggtagaggccgc 107
Query: 801 gaataccatcactggcaagggtcttgcggtaaacatcaacgagtccattgaactgcctct 860
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 106 gaataccatcactggcaagggtcttgcggtaaacatcaacaagtccattgaactgcctct 47
Query: 861 caccacccttctttgcagccttggcatcattggccaaacgcgtacg 906
|||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 46 caccacccttctttgcagccttggcatcattggccaaacgtgtacg 1
Score = 93.7 bits (47), Expect = 5e-017
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 83 gattccgaaacctacatagataacattcgagcaaccctttgcacgcgcaaaacaaaata 141
|||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 805 gattccgaaaccaacatagataacattcgagcaaccctttgcatgcgcaaaaccaaata 747
>gb|CN130256.1|CN130256 RHOH1_40_F09.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_40_F09_A002 3', mRNA sequence
Length = 828
Score = 1027 bits (518), Expect = 0.0
Identities = 662/705 (93%), Gaps = 10/705 (1%)
Strand = Plus / Minus
Query: 206 atttctaacgtcacttatttccaatctctgacataaaaagaggtgcggtcacagccacgc 265
|||||||||||||||||||||||||||| ||| |||||| | ||||||||||||||| |
Sbjct: 700 atttctaacgtcacttatttccaatctccgacgcaaaaagggatgcggtcacagccacac 641
Query: 266 tacaaac---tcaccagcctctgcgagagcgaa-cttaaaat-ggtgtcgagggtccgta 320
||||||| |||||| ||||||||||||| || |||||||| |||||| ||||||| ||
Sbjct: 640 tacaaacaactcaccaacctctgcgagagctaaacttaaaattggtgtccagggtccata 581
Query: 321 cgtatgtttacttaaaggaggcacctaaaacatcatgtttgttgttcgtcgtcatcatca 380
|||||||| ||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct: 580 cgtatgtta--ttaaagg---cacctaaaacatcatgtttgttgttcgtcatcgtcatca 526
Query: 381 ttatacatccttagccaccaccagacccgtacttcttgccgaagacaaccacctggagct 440
| ||| |||||||||| ||||||||||| ||||||||||||||||| | |||||||||||
Sbjct: 525 taatatatccttagccgccaccagacccatacttcttgccgaagacgatcacctggagct 466
Query: 441 tgtcgtacccagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcac 500
||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||
Sbjct: 465 tgtcgtacccagcaaggacaccagcaccagcaacagcacggaggatgtttgccccagcac 406
Query: 501 ccttgaagagggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagc 560
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 405 ccttgaagagggacttggtaccctcctttgcaacaatctgcttgaaagcatccaaggagc 346
Query: 561 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatgg 620
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 345 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtatcaatgg 286
Query: 621 ggtaggaggcaaggccagcaccaatggttataccccacccgagcaagaagctggctaaga 680
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 285 ggtaagaggcaaggccagcaccaatggttataccccagccgagcaagaagctggctaaga 226
Query: 681 agttatcctgcagggtaccaacaagaagcactggcttcagggagtcatacataccaaagt 740
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 agttgtcctgcagggtaccaacaagaagcactggcttcagggagtcatacataccaaagt 166
Query: 741 aaagacctcggtacacaatgatccccacacaagatatattgaatccacggtagaggccac 800
|||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |
Sbjct: 165 aaagacctcggtacacaatgattcccacacaagagatattgaatccacggtagaggccgc 106
Query: 801 gaataccatcactggcaagggtcttgcggtaaacatcaacgagtccattgaactgcctct 860
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 105 gaataccatcactggcaagggtcttgcggtaaacatcaacaagtccattgaactgcctct 46
Query: 861 caccacccttctttgcagccttggcatcattggccaaacgcgtac 905
|||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 45 caccacccttctttgcagccttggcatcattggccaaacgtgtac 1
Score = 107 bits (54), Expect = 3e-021
Identities = 63/66 (95%)
Strand = Plus / Minus
Query: 76 aagctgtgattccgaaacctacatagataacattcgagcaaccctttgcacgcgcaaaac 135
||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 811 aagctgtgattccgaaaccaacatagataacattcgagcaaccctttgcatgcgcaaaac 752
Query: 136 aaaata 141
|||||
Sbjct: 751 caaata 746
>gb|CF485874.1|CF485874 POL1_34_F04.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_34_F04_A002 3', mRNA sequence
Length = 739
Score = 1021 bits (515), Expect = 0.0
Identities = 656/698 (93%), Gaps = 10/698 (1%)
Strand = Plus / Minus
Query: 206 atttctaacgtcacttatttccaatctctgacataaaaagaggtgcggtcacagccacgc 265
|||||||||||||||||||||||||||| ||| |||||| | ||||||||||||||| |
Sbjct: 693 atttctaacgtcacttatttccaatctccgacgcaaaaagggatgcggtcacagccacac 634
Query: 266 tacaaac---tcaccagcctctgcgagagcgaa-cttaaaat-ggtgtcgagggtccgta 320
||||||| |||||| ||||||||||||| || |||||||| |||||| ||||||| ||
Sbjct: 633 tacaaacaactcaccaacctctgcgagagctaaacttaaaattggtgtccagggtccata 574
Query: 321 cgtatgtttacttaaaggaggcacctaaaacatcatgtttgttgttcgtcgtcatcatca 380
|||||||| ||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct: 573 cgtatgtta--ttaaagg---cacctaaaacatcatgtttgttgttcgtcatcgtcatca 519
Query: 381 ttatacatccttagccaccaccagacccgtacttcttgccgaagacaaccacctggagct 440
| ||| |||||||||| ||||||||||| ||||||||||||||||| | |||||||||||
Sbjct: 518 taatatatccttagccgccaccagacccatacttcttgccgaagacgatcacctggagct 459
Query: 441 tgtcgtacccagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcac 500
||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||
Sbjct: 458 tgtcgtacccagcaaggacaccagcaccagcaacagcacggaggatgtttgccccagcac 399
Query: 501 ccttgaagagggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagc 560
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 398 ccttgaagagggacttggtaccctcctttgcaacaatctgcttgaaagcatccaaggagc 339
Query: 561 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatgg 620
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 338 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtatcaatgg 279
Query: 621 ggtaggaggcaaggccagcaccaatggttataccccacccgagcaagaagctggctaaga 680
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 278 ggtaagaggcaaggccagcaccaatggttataccccagccgagcaagaagctggctaaga 219
Query: 681 agttatcctgcagggtaccaacaagaagcactggcttcagggagtcatacataccaaagt 740
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 agttgtcctgcagggtaccaacaagaagcactggcttcagggagtcatacataccaaagt 159
Query: 741 aaagacctcggtacacaatgatccccacacaagatatattgaatccacggtagaggccac 800
|||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |
Sbjct: 158 aaagacctcggtacacaatgattcccacacaagagatattgaatccacggtagaggccgc 99
Query: 801 gaataccatcactggcaagggtcttgcggtaaacatcaacgagtccattgaactgcctct 860
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 98 gaataccatcactggcaagggtcttgcggtaaacatcaacaagtccattgaactgcctct 39
Query: 861 caccacccttctttgcagccttggcatcattggccaaa 898
||||||||||||||||||||||||||||||||||||||
Sbjct: 38 caccacccttctttgcagccttggcatcattggccaaa 1
Score = 44.1 bits (22), Expect = 0.039
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 150 aaaaaactgatgcagcaaaagcgtctaccc 179
|||||||||||||||| ||| |||||||||
Sbjct: 739 aaaaaactgatgcagccaaatcgtctaccc 710
>gb|BF588045.1|BF588045 FM1_37_A09.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 562
Score = 844 bits (426), Expect = 0.0
Identities = 450/458 (98%)
Strand = Plus / Minus
Query: 707 agcactggcttcagggagtcatacataccaaagtaaagacctcggtacacaatgatcccc 766
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 562 agcactggcttcagggagtcatacataccaaagtaaagacctcggtacacaatgattccc 503
Query: 767 acacaagatatattgaatccacggtagaggccacgaataccatcactggcaagggtcttg 826
|||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 502 acacaagagatattgaatccacggtagaggccgcgaataccatcactggcaagggtcttg 443
Query: 827 cggtaaacatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggca 886
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 cggtaaacatcaacaagtccattgaactgcctctcaccacccttctttgcagccttggca 383
Query: 887 tcattggccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagca 946
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tcattggccaaacgtgtacgagcgtagtccagagaatagacaaagaatagagagcaagca 323
Query: 947 ccagcagctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtcc 1006
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ccagcagctcctccagaagccagatttccagcaaaccacttccagtacccatccttgtcc 263
Query: 1007 ttcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtg 1066
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ttcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtg 203
Query: 1067 gggaagtaacggatgacattagctgtgtttcctctccacagtgagacaaaaccctcatct 1126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gggaagtaacggatgacattagctgtgtttcctctccacagtgagacaaaaccctcatct 143
Query: 1127 ctgattgtccggccaaagcagtccccaatacccttgta 1164
||||||||||| ||||||||||||||||||||||||||
Sbjct: 142 ctgattgtccgaccaaagcagtccccaatacccttgta 105
>gb|CF484164.1|CF484164 POL1_3_C06.g1_A002 Pollen Sorghum bicolor cDNA clone POL1_3_C06_A002
5', mRNA sequence
Length = 600
Score = 817 bits (412), Expect = 0.0
Identities = 439/448 (97%)
Strand = Plus / Minus
Query: 717 tcagggagtcatacataccaaagtaaagacctcggtacacaatgatccccacacaagata 776
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 600 tcagggagtcatacataccaaagtaaagacctcggtacacaatgattcccacacaagaga 541
Query: 777 tattgaatccacggtagaggccacgaataccatcactggcaagggtcttgcggtaaacat 836
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 540 tattgaatccacggtagaggccgcgaataccatcactggcaagggtcttgcggtaaacat 481
Query: 837 caacgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattggcca 896
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 caacaagtccattgaactgcctctcaccacccttctttgcagccttggcatcattggcca 421
Query: 897 aacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagcagctc 956
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 aacgtgtacgagcgtagtccagagaatagacaaagaatagagagcaagcaccagcagctc 361
Query: 957 caccagaagccagatttccagcaaaccacttccagtacccatccttgtccttcttaaagt 1016
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ctccagaagccagatttccagcaaaccacttccagtacccatccttgtccttcttaaagt 301
Query: 1017 tgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaagtaac 1076
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaagtaac 241
Query: 1077 ggatgacattagctgtgtttcctctccacagtgagacaaaaccctcatctctgattgtcc 1136
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ggattacattagctgtgtttcctctccacagtgagacaaaaccctcatctctgattgtcc 181
Query: 1137 ggccaaagcagtccccaatacccttgta 1164
| ||||||||||||||||||||||||||
Sbjct: 180 gaccaaagcagtccccaatacccttgta 153
>gb|AW679762.1|AW679762 WS1_31_H09.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 629
Score = 801 bits (404), Expect = 0.0
Identities = 539/579 (93%), Gaps = 10/579 (1%)
Strand = Plus / Minus
Query: 206 atttctaacgtcacttatttccaatctctgacataaaaagaggtgcggtcacagccacgc 265
|||||||||||||||||||||||||||| ||| |||||| | ||||||||||||||| |
Sbjct: 574 atttctaacgtcacttatttccaatctccgacgcaaaaagggatgcggtcacagccacac 515
Query: 266 tacaaac---tcaccagcctctgcgagagcgaa-cttaaaat-ggtgtcgagggtccgta 320
||||||| |||||| ||||||||||||| || |||||||| |||||| ||||||| ||
Sbjct: 514 tacaaacaactcaccaacctctgcgagagctaaacttaaaattggtgtccagggtccata 455
Query: 321 cgtatgtttacttaaaggaggcacctaaaacatcatgtttgttgttcgtcgtcatcatca 380
|||||||| ||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct: 454 cgtatgtta--ttaaagg---cacctaaaacatcatgtttgttgttcgtcatcgtcatca 400
Query: 381 ttatacatccttagccaccaccagacccgtacttcttgccgaagacaaccacctggagct 440
| ||| |||||||||| ||||||||||| ||||||||||||||||| | |||||||||||
Sbjct: 399 taatatatccttagccgccaccagacccatacttcttgccgaagacgatcacctggagct 340
Query: 441 tgtcgtacccagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcac 500
||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||
Sbjct: 339 tgtcgtacccagcaaggacaccagcaccagcaacagcacggaggatgtttgccccagcac 280
Query: 501 ccttgaagagggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagc 560
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 279 ccttgaagagggacttggtaccctcctttgcaacaatctgcttgaaagcatccaaggagc 220
Query: 561 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatgg 620
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 219 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtatcaatgg 160
Query: 621 ggtaggaggcaaggccagcaccaatggttataccccacccgagcaagaagctggctaaga 680
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 159 ggtaagaggcaaggccagcaccaatggttataccccagccgagcaagaagctggctaaga 100
Query: 681 agttatcctgcagggtaccaacaagaagcactggcttcagggagtcatacataccaaagt 740
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 agttgtcctgcagggtaccaacaagaagcactggcttcagggagtcatacataccaaagt 40
Query: 741 aaagacctcggtacacaatgatccccacacaagatatat 779
|||||||||||||||||||||| ||||||||||| ||||
Sbjct: 39 aaagacctcggtacacaatgattcccacacaagagatat 1
Score = 48.1 bits (24), Expect = 0.003
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 148 ataaaaaactgatgcagcaaaagcgtctaccc 179
|||||||||||||||||| ||| |||||||||
Sbjct: 622 ataaaaaactgatgcagccaaatcgtctaccc 591
>gb|BG649248.1|BG649248 EM1_79_C06.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 640
Score = 787 bits (397), Expect = 0.0
Identities = 529/568 (93%), Gaps = 10/568 (1%)
Strand = Plus / Minus
Query: 206 atttctaacgtcacttatttccaatctctgacataaaaagaggtgcggtcacagccacgc 265
|||||||||||||||||||||||||||| ||| |||||| | ||||||||||||||| |
Sbjct: 563 atttctaacgtcacttatttccaatctccgacgcaaaaagggatgcggtcacagccacac 504
Query: 266 tacaaac---tcaccagcctctgcgagagcgaa-cttaaaat-ggtgtcgagggtccgta 320
||||||| |||||| ||||||||||||| || |||||||| |||||| ||||||| ||
Sbjct: 503 tacaaacaactcaccaacctctgcgagagctaaacttaaaattggtgtccagggtccata 444
Query: 321 cgtatgtttacttaaaggaggcacctaaaacatcatgtttgttgttcgtcgtcatcatca 380
|||||||| ||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct: 443 cgtatgtta--ttaaagg---cacctaaaacatcatgtttgttgttcgtcatcgtcatca 389
Query: 381 ttatacatccttagccaccaccagacccgtacttcttgccgaagacaaccacctggagct 440
| ||| |||||||||| ||||||||||| ||||||||||||||||| | |||||||||||
Sbjct: 388 taatatatccttagccgccaccagacccatacttcttgccgaagacgatcacctggagct 329
Query: 441 tgtcgtacccagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcac 500
||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||
Sbjct: 328 tgtcgtacccagcaaggacaccagcaccagcaacagcacggaggatgtttgccccagcac 269
Query: 501 ccttgaagagggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagc 560
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 268 ccttgaagagggacttggtaccctcctttgcaacaatctgcttgaaagcatccaaggagc 209
Query: 561 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatgg 620
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 208 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtatcaatgg 149
Query: 621 ggtaggaggcaaggccagcaccaatggttataccccacccgagcaagaagctggctaaga 680
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 148 ggtaagaggcaaggccagcaccaatggttataccccagccgagcaagaagctggctaaga 89
Query: 681 agttatcctgcagggtaccaacaagaagcactggcttcagggagtcatacataccaaagt 740
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 agttgtcctgcagggtaccaacaagaagcactggcttcagggagtcatacataccaaagt 29
Query: 741 aaagacctcggtacacaatgatccccac 768
|||||||||||||||||||||| |||||
Sbjct: 28 aaagacctcggtacacaatgattcccac 1
Score = 48.1 bits (24), Expect = 0.003
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 110 cgagcaaccctttgcacgcgcaaaacaaaata 141
|||||||||||||||| ||||||||| |||||
Sbjct: 640 cgagcaaccctttgcatgcgcaaaaccaaata 609
Score = 48.1 bits (24), Expect = 0.003
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 148 ataaaaaactgatgcagcaaaagcgtctaccc 179
|||||||||||||||||| ||| |||||||||
Sbjct: 611 ataaaaaactgatgcagccaaatcgtctaccc 580
>gb|BF422088.1|BF422088 FM1_12_G04.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 562
Score = 751 bits (379), Expect = 0.0
Identities = 522/562 (92%), Gaps = 12/562 (2%)
Strand = Plus / Minus
Query: 206 atttctaacgtcacttatttccaatctctgacataaaaagaggtgcggtcacagccacgc 265
||||||||||||||||||||||| |||| ||| |||||| | ||||||||||||||| |
Sbjct: 558 atttctaacgtcacttatttcca-tctccgacgcaaaaag-gatgcggtcacagccacac 501
Query: 266 tacaaac---tcaccagcctctgcgagagcgaa-cttaaaat-ggtgtcgagggtccgta 320
||||||| |||||| ||||||||||||| || |||||||| |||||| ||||||| ||
Sbjct: 500 tacaaacaactcaccaacctctgcgagagctaaacttaaaattggtgtccagggtccata 441
Query: 321 cgtatgtttacttaaaggaggcacctaaaacatcatgtttgttgttcgtcgtcatcatca 380
|||||||| ||||||| ||||||||||||| ||||||||||||||| || ||||||
Sbjct: 440 cgtatgtta--ttaaagg---cacctaaaacatcctgtttgttgttcgtcatcgtcatca 386
Query: 381 ttatacatccttagccaccaccagacccgtacttcttgccgaagacaaccacctggagct 440
| ||| |||||||||| ||||||||||| ||||||||||||||||| | |||||||||||
Sbjct: 385 tcatatatccttagccgccaccagacccatacttcttgccgaagacgatcacctggagct 326
Query: 441 tgtcgtacccagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcac 500
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 325 tgtcgtacccagcaaggacaccagcaccagcaacagcacggaggatgtttgcgccagcac 266
Query: 501 ccttgaagagggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagc 560
|||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 265 ccttgaagagtgacttggtaccctcctttgcaacaatctgcttgaaagcatccaaggagc 206
Query: 561 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatgg 620
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 205 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtatcaatgg 146
Query: 621 ggtaggaggcaaggccagcaccaatggttataccccacccgagcaagaagctggctaaga 680
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 145 ggtaagaggcaaggccagcaccaatggttataccccagccgagcaagaagctggctaaga 86
Query: 681 agttatcctgcagggtaccaacaagaagcactggcttcagggagtcatacataccaaagt 740
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 agttgtcctgcagggtaccaacaagaagcactggcttcagggagtcatacataccaaagt 26
Query: 741 aaagacctcggtacacaatgat 762
||||||||||||||||||||||
Sbjct: 25 aaagacctcggtacacaatgat 4
>gb|AW285949.2|AW285949 LG1_255_C11.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 420
Score = 747 bits (377), Expect = 0.0
Identities = 401/409 (98%)
Strand = Plus / Minus
Query: 672 tggctaagaagttatcctgcagggtaccaacaagaagcactggcttcagggagtcataca 731
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tggctaagaagttgtcctgcagggtaccaacaagaagcactggcttcagggagtcataca 361
Query: 732 taccaaagtaaagacctcggtacacaatgatccccacacaagatatattgaatccacggt 791
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 360 taccaaagtaaagacctcggtacacaatgattcccacacaagagatattgaatccacggt 301
Query: 792 agaggccacgaataccatcactggcaagggtcttgcggtaaacatcaacgagtccattga 851
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 300 agaggccgcgaataccatcactggcaagggtcttgcggtaaacatcaacaagtccattga 241
Query: 852 actgcctctcaccacccttctttgcagccttggcatcattggccaaacgcgtacgggcgt 911
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 240 actgcctctcaccacccttctttgcagccttggcatcattggccaaacgtgtacgagcgt 181
Query: 912 agtccagagaatagacaaagaatagagagcaagcaccagcagctccaccagaagccagat 971
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 180 agtccagagaatagacaaagaatagagagcaagcaccagcagctcctccagaagccagat 121
Query: 972 ttccagcaaaccacttccagtacccatccttgtccttcttaaagttgaacatgcgcttga 1031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ttccagcaaaccacttccagtacccatccttgtccttcttaaagttgaacatgcgcttga 61
Query: 1032 agtgatccttgaacgcaaagttcaatgcctgtgtggggaagtaacggat 1080
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 agtgatccttgaacgcaaagttcaatgcctgtgtggggaagtaacggat 12
>gb|CD226624.1|CD226624 CCC1_47_G03.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_47_G03_A007 3', mRNA sequence
Length = 585
Score = 743 bits (375), Expect = 0.0
Identities = 504/542 (92%), Gaps = 10/542 (1%)
Strand = Plus / Minus
Query: 206 atttctaacgtcacttatttccaatctctgacataaaaagaggtgcggtcacagccacgc 265
|||||||||||||||||||||||||||| ||| |||||| | ||||||||||||||| |
Sbjct: 537 atttctaacgtcacttatttccaatctccgacgcaaaaagggatgcggtcacagccacac 478
Query: 266 tacaaac---tcaccagcctctgcgagagcgaa-cttaaaat-ggtgtcgagggtccgta 320
||||||| |||||| ||||||||||||| || |||||||| |||||| ||||||| ||
Sbjct: 477 tacaaacaactcaccaacctctgcgagagctaaacttaaaattggtgtccagggtccata 418
Query: 321 cgtatgtttacttaaaggaggcacctaaaacatcatgtttgttgttcgtcgtcatcatca 380
|||||||| ||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct: 417 cgtatgtta--ttaaagg---cacctaaaacatcatgtttgttgttcgtcatcgtcatca 363
Query: 381 ttatacatccttagccaccaccagacccgtacttcttgccgaagacaaccacctggagct 440
| ||| |||||||||| ||||||||||| ||||||||||||||||| | |||||||||||
Sbjct: 362 taatatatccttagccgccaccagacccatacttcttgccgaagacgatcacctggagct 303
Query: 441 tgtcgtacccagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcac 500
||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||
Sbjct: 302 tgtcgtacccagcaaggacaccagcaccagcaacagcacggaggatgtttgccccagcac 243
Query: 501 ccttgaagagggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagc 560
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 242 ccttgaagagggacttggtaccctcctttgcaacaatctgcttgaaagcatccaaggagc 183
Query: 561 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatgg 620
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 182 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtatcaatgg 123
Query: 621 ggtaggaggcaaggccagcaccaatggttataccccacccgagcaagaagctggctaaga 680
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 122 ggtaagaggcaaggccagcaccaatggttataccccagccgagcaagaagctggctaaga 63
Query: 681 agttatcctgcagggtaccaacaagaagcactggcttcagggagtcatacataccaaagt 740
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 agttgtcctgcagggtaccaacaagaagcactggcttcagggagtcatacataccaaagt 3
Query: 741 aa 742
||
Sbjct: 2 aa 1
Score = 48.1 bits (24), Expect = 0.003
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 148 ataaaaaactgatgcagcaaaagcgtctaccc 179
|||||||||||||||||| ||| |||||||||
Sbjct: 585 ataaaaaactgatgcagccaaatcgtctaccc 554
>gb|BG355976.2|BG355976 EM1_18_H07.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 557
Score = 741 bits (374), Expect = 0.0
Identities = 503/541 (92%), Gaps = 10/541 (1%)
Strand = Plus / Minus
Query: 206 atttctaacgtcacttatttccaatctctgacataaaaagaggtgcggtcacagccacgc 265
|||||||||||||||||||||||||||| ||| |||||| | ||||||||||||||| |
Sbjct: 536 atttctaacgtcacttatttccaatctccgacgcaaaaagggatgcggtcacagccacac 477
Query: 266 tacaaac---tcaccagcctctgcgagagcgaa-cttaaaat-ggtgtcgagggtccgta 320
||||||| |||||| ||||||||||||| || |||||||| |||||| ||||||| ||
Sbjct: 476 tacaaacaactcaccaacctctgcgagagctaaacttaaaattggtgtccagggtccata 417
Query: 321 cgtatgtttacttaaaggaggcacctaaaacatcatgtttgttgttcgtcgtcatcatca 380
|||||||| ||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct: 416 cgtatgtta--ttaaagg---cacctaaaacatcatgtttgttgttcgtcatcgtcatca 362
Query: 381 ttatacatccttagccaccaccagacccgtacttcttgccgaagacaaccacctggagct 440
| ||| |||||||||| ||||||||||| ||||||||||||||||| | |||||||||||
Sbjct: 361 taatatatccttagccgccaccagacccatacttcttgccgaagacgatcacctggagct 302
Query: 441 tgtcgtacccagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcac 500
||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||
Sbjct: 301 tgtcgtacccagcaaggacaccagcaccagcaacagcacggaggatgtttgccccagcac 242
Query: 501 ccttgaagagggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagc 560
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 241 ccttgaagagggacttggtaccctcctttgcaacaatctgcttgaaagcatccaaggagc 182
Query: 561 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatgg 620
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 181 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtatcaatgg 122
Query: 621 ggtaggaggcaaggccagcaccaatggttataccccacccgagcaagaagctggctaaga 680
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 121 ggtaagaggcaaggccagcaccaatggttataccccagccgagcaagaagctggctaaga 62
Query: 681 agttatcctgcagggtaccaacaagaagcactggcttcagggagtcatacataccaaagt 740
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agttgtcctgcagggtaccaacaagaagcactggcttcagggagtcatacataccaaagt 2
Query: 741 a 741
|
Sbjct: 1 a 1
>gb|CF480057.1|CF480057 POL1_63_B03.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_63_B03_A002 5', mRNA sequence
Length = 710
Score = 737 bits (372), Expect = 0.0
Identities = 399/408 (97%)
Strand = Plus / Minus
Query: 757 aatgatccccacacaagatatattgaatccacggtagaggccacgaataccatcactggc 816
|||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 710 aatgattcccacacaagagatattgaatccacggtagaggccgcgaataccatcactggc 651
Query: 817 aagggtcttgcggtaaacatcaacgagtccattgaactgcctctcaccacccttctttgc 876
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 650 aagggtcttgcggtaaacatcaacaagtccattgaactgcctctcaccacccttctttgc 591
Query: 877 agccttggcatcattggccaaacgcgtacgggcgtagtccagagaatagacaaagaatag 936
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 590 agccttggcatcattggccaaacgtgtacgagcgtagtccagagaatagacaaagaatag 531
Query: 937 agagcaagcaccagcagctccaccagaagccagatttccagcaaaccacttccagtaccc 996
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 530 agagcaagcaccagcagctcctccagaagccagatttccagcaaaccacttccagtaccc 471
Query: 997 atccttgtccttcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaa 1056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 atccttgtccttcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaa 411
Query: 1057 tgcctgtgtggggaagtaacggatgacattagctgtgtttcctctccacagtgagacaaa 1116
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 410 tgcctgtgtggggaagtaacggattacattagctgtgtttcctctccacagtgagacaaa 351
Query: 1117 accctcatctctgattgtccggccaaagcagtccccaatacccttgta 1164
||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 350 accctcatctctgattgtccgaccaaagcagtccccaatacccttgta 303
>gb|CD205454.1|CD205454 HS1_14_A05.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_14_A05_A012 3', mRNA sequence
Length = 635
Score = 735 bits (371), Expect = 0.0
Identities = 504/542 (92%), Gaps = 11/542 (2%)
Strand = Plus / Minus
Query: 206 atttctaacgtcacttatttccaatctctgacataaaaagaggtgcggtcacagccacgc 265
|||||||||||||||||||||||||||| ||| |||||| | ||||||||||||||| |
Sbjct: 536 atttctaacgtcacttatttccaatctccgacgcaaaaag-gatgcggtcacagccacac 478
Query: 266 tacaaac---tcaccagcctctgcgagagcgaa-cttaaaat-ggtgtcgagggtccgta 320
||||||| |||||| ||||||||||||| || |||||||| |||||| ||||||| ||
Sbjct: 477 tacaaacaactcaccaacctctgcgagagctaaacttaaaattggtgtccagggtccata 418
Query: 321 cgtatgtttacttaaaggaggcacctaaaacatcatgtttgttgttcgtcgtcatcatca 380
|||||||| ||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct: 417 cgtatgtta--ttaaagg---cacctaaaacatcatgtttgttgttcgtcatcgtcatca 363
Query: 381 ttatacatccttagccaccaccagacccgtacttcttgccgaagacaaccacctggagct 440
| ||| |||||||||| ||||||||||| ||||||||||||||||| | |||||||||||
Sbjct: 362 tcatatatccttagccgccaccagacccatacttcttgccgaagacgatcacctggagct 303
Query: 441 tgtcgtacccagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcac 500
|||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 302 tgtcatacccagcaaggacaccagcaccagcaacagcacggaggatgtttgcgccagcac 243
Query: 501 ccttgaagagggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagc 560
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 242 ccttgaagagggacttggtaccctcctttgcaacaatctgcttgaaagcatccaaggagc 183
Query: 561 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatgg 620
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 182 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtatcaatgg 123
Query: 621 ggtaggaggcaaggccagcaccaatggttataccccacccgagcaagaagctggctaaga 680
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 122 ggtaagaggcaaggccagcaccaatggttataccccagccgagcaagaagctggctaaga 63
Query: 681 agttatcctgcagggtaccaacaagaagcactggcttcagggagtcatacataccaaagt 740
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 agttgtcctgcagggtaccaacaagaagcactggcttcagggagtcatacataccaaagt 3
Query: 741 aa 742
||
Sbjct: 2 aa 1
Score = 75.8 bits (38), Expect = 1e-011
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 96 acatagataacattcgagcaaccctttgcacgcgcaaaacaaaata 141
|||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 627 acatagataacattcgagcaaccctttgcatgcgcaaaaccaaata 582
>gb|BF587947.1|BF587947 FM1_34_H03.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 541
Score = 733 bits (370), Expect = 0.0
Identities = 502/541 (92%), Gaps = 10/541 (1%)
Strand = Plus / Minus
Query: 227 caatctctgacataaaaagaggtgcggtcacagccacgctacaaac---tcaccagcctc 283
||||||| ||| |||||| | ||||||||||||||| |||||||| |||||| ||||
Sbjct: 539 caatctccgacgcaaaaagggatgcggtcacagccacactacaaacaactcaccaacctc 480
Query: 284 tgcgagagcgaa-cttaaaat-ggtgtcgagggtccgtacgtatgtttacttaaaggagg 341
||||||||| || |||||||| |||||| ||||||| |||||||||| |||||||
Sbjct: 479 tgcgagagctaaacttaaaattggtgtccagggtccatacgtatgtta--ttaaagg--- 425
Query: 342 cacctaaaacatcatgtttgttgttcgtcgtcatcatcattatacatccttagccaccac 401
||||||||||||| ||||||||||||||| || ||||||| ||| |||||||||| ||||
Sbjct: 424 cacctaaaacatcctgtttgttgttcgtcatcgtcatcatcatatatccttagccgccac 365
Query: 402 cagacccgtacttcttgccgaagacaaccacctggagcttgtcgtacccagcaaggacac 461
||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 364 cagacccatacttcttgccgaagacgatcacctggagcttgtcgtacccagcaaggacac 305
Query: 462 cagcaccagctacagcgcggaggatgtttgcgccagcacccttgaagagggacttggtac 521
|||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 304 cagcaccagcaacagcacggaggatgtttgcgccagcacccttgaagagtgacttggtac 245
Query: 522 cctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtacttgacggcctcac 581
|||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 244 cctcctttgcaacaatctgcttgaaagcatccaaggagctgttgtacttgacggcctcac 185
Query: 582 cagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggaggcaaggccagcac 641
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 184 cagatgtcatcatcatgcgacggcgaacagtatcaatggggtaagaggcaaggccagcac 125
Query: 642 caatggttataccccacccgagcaagaagctggctaagaagttatcctgcagggtaccaa 701
|||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 124 caatggttataccccagccgagcaagaagctggctaagaagttgtcctgcagggtaccaa 65
Query: 702 caagaagcactggcttcagggagtcatacataccaaagtaaagacctcggtacacaatga 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 caagaagcactggcttcagggagtcatacataccaaagtaaagacctcggtacacaatga 5
Query: 762 t 762
|
Sbjct: 4 t 4
>gb|CF484090.1|CF484090 POL1_3_C06.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_3_C06_A002 3', mRNA sequence
Length = 608
Score = 726 bits (366), Expect = 0.0
Identities = 495/533 (92%), Gaps = 10/533 (1%)
Strand = Plus / Minus
Query: 206 atttctaacgtcacttatttccaatctctgacataaaaagaggtgcggtcacagccacgc 265
|||||||||||||||||||||||||||| ||| |||||| | ||||||||||||||| |
Sbjct: 528 atttctaacgtcacttatttccaatctccgacgcaaaaagggatgcggtcacagccacac 469
Query: 266 tacaaac---tcaccagcctctgcgagagcgaa-cttaaaat-ggtgtcgagggtccgta 320
||||||| |||||| ||||||||||||| || |||||||| |||||| ||||||| ||
Sbjct: 468 tacaaacaactcaccaacctctgcgagagctaaacttaaaattggtgtccagggtccata 409
Query: 321 cgtatgtttacttaaaggaggcacctaaaacatcatgtttgttgttcgtcgtcatcatca 380
|||||||| ||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct: 408 cgtatgtta--ttaaagg---cacctaaaacatcatgtttgttgttcgtcatcgtcatca 354
Query: 381 ttatacatccttagccaccaccagacccgtacttcttgccgaagacaaccacctggagct 440
| ||| |||||||||| ||||||||||| ||||||||||||||||| | |||||||||||
Sbjct: 353 taatatatccttagccgccaccagacccatacttcttgccgaagacgatcacctggagct 294
Query: 441 tgtcgtacccagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcac 500
||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||
Sbjct: 293 tgtcgtacccagcaaggacaccagcaccagcaacagcacggaggatgtttgccccagcac 234
Query: 501 ccttgaagagggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagc 560
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 233 ccttgaagagggacttggtaccctcctttgcaacaatctgcttgaaagcatccaaggagc 174
Query: 561 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatgg 620
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 173 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtatcaatgg 114
Query: 621 ggtaggaggcaaggccagcaccaatggttataccccacccgagcaagaagctggctaaga 680
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 113 ggtaagaggcaaggccagcaccaatggttataccccagccgagcaagaagctggctaaga 54
Query: 681 agttatcctgcagggtaccaacaagaagcactggcttcagggagtcatacata 733
|||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 agttgtcctgcagggtaccaacaagaagcactggcttcagggagtcatacata 1
Score = 54.0 bits (27), Expect = 4e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 107 attcgagcaaccctttgcacgcgcaaaacaaaata 141
||||||||||||||||||| ||||||||| |||||
Sbjct: 608 attcgagcaaccctttgcatgcgcaaaaccaaata 574
>gb|CF761339.1|CF761339 DSAF1_74_A02.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_74_A02_A011 5', mRNA sequence
Length = 528
Score = 726 bits (366), Expect = 0.0
Identities = 495/533 (92%), Gaps = 10/533 (1%)
Strand = Plus / Minus
Query: 212 aacgtcacttatttccaatctctgacataaaaagaggtgcggtcacagccacgctacaaa 271
|||||||||||||||||||||| ||| |||||| | ||||||||||||||| |||||||
Sbjct: 528 aacgtcacttatttccaatctccgacgcaaaaagggatgcggtcacagccacactacaaa 469
Query: 272 c---tcaccagcctctgcgagagcgaa-cttaaaat-ggtgtcgagggtccgtacgtatg 326
| |||||| ||||||||||||| || |||||||| |||||| ||||||| ||||||||
Sbjct: 468 caactcaccaacctctgcgagagctaaacttaaaattggtgtccagggtccatacgtatg 409
Query: 327 tttacttaaaggaggcacctaaaacatcatgtttgttgttcgtcgtcatcatcattatac 386
|| ||||||| ||||||||||||||||||||||||||||| || ||||||| |||
Sbjct: 408 tta--ttaaagg---cacctaaaacatcatgtttgttgttcgtcatcgtcatcataatat 354
Query: 387 atccttagccaccaccagacccgtacttcttgccgaagacaaccacctggagcttgtcgt 446
|||||||||| ||||||||||| ||||||||||||||||| | |||||||||||||||||
Sbjct: 353 atccttagccgccaccagacccatacttcttgccgaagacgatcacctggagcttgtcgt 294
Query: 447 acccagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcacccttga 506
||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||
Sbjct: 293 acccagcaaggacaccagcaccagcaacagcacggaggatgtttgccccagcacccttga 234
Query: 507 agagggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgt 566
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 233 agagggacttggtaccctcctttgcaacaatctgcttgaaagcatccaaggagctgttgt 174
Query: 567 acttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtagg 626
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 173 acttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtatcaatggggtaag 114
Query: 627 aggcaaggccagcaccaatggttataccccacccgagcaagaagctggctaagaagttat 686
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 113 aggcaaggccagcaccaatggttataccccagccgagcaagaagctggctaagaagttgt 54
Query: 687 cctgcagggtaccaacaagaagcactggcttcagggagtcatacataccaaag 739
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 cctgcagggtaccaacaagaagcactggcttcagggagtcatacataccaaag 1
>gb|BF481075.1|BF481075 FM1_16_B02.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 474
Score = 680 bits (343), Expect = 0.0
Identities = 363/370 (98%)
Strand = Plus / Minus
Query: 795 ggccacgaataccatcactggcaagggtcttgcggtaaacatcaacgagtccattgaact 854
|||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 474 ggccgcgaataccatcactggcaagggtcttgcggtaaacatcaacaagtccattgaact 415
Query: 855 gcctctcaccacccttctttgcagccttggcatcattggccaaacgcgtacgggcgtagt 914
|||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 414 gcctctcaccacccttctttgcagccttggcatcattggccaaacgtgtacgagcgtagt 355
Query: 915 ccagagaatagacaaagaatagagagcaagcaccagcagctccaccagaagccagatttc 974
||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 354 ccagagaatagacaaagaatagagagcaagcaccagcagctcctccagaagcnagatttc 295
Query: 975 cagcaaaccacttccagtacccatccttgtccttcttaaagttgaacatgcgcttgaagt 1034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 cagcaaaccacttccagtacccatccttgtccttcttaaagttgaacatgcgcttgaagt 235
Query: 1035 gatccttgaacgcaaagttcaatgcctgtgtggggaagtaacggatgacattagctgtgt 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 gatccttgaacgcaaagttcaatgcctgtgtggggaagtaacggatgacattagctgtgt 175
Query: 1095 ttcctctccacagtgagacaaaaccctcatctctgattgtccggccaaagcagtccccaa 1154
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 174 ttcctctccacagtgagacaaaaccctcatctctgattgtccgaccaaagcagtccccaa 115
Query: 1155 tacccttgta 1164
||||||||||
Sbjct: 114 tacccttgta 105
>gb|BG049474.1|BG049474 OV1_20_D11.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 574
Score = 676 bits (341), Expect = 0.0
Identities = 470/508 (92%), Gaps = 10/508 (1%)
Strand = Plus / Minus
Query: 206 atttctaacgtcacttatttccaatctctgacataaaaagaggtgcggtcacagccacgc 265
|||||||||||||||||||||||||||| ||| |||||| | ||||||||||||||| |
Sbjct: 503 atttctaacgtcacttatttccaatctccgacgcaaaaagggatgcggtcacagccacac 444
Query: 266 tacaaac---tcaccagcctctgcgagagcgaa-cttaaaat-ggtgtcgagggtccgta 320
||||||| |||||| ||||||||||||| || |||||||| |||||| ||||||| ||
Sbjct: 443 tacaaacaactcaccaacctctgcgagagctaaacttaaaattggtgtccagggtccata 384
Query: 321 cgtatgtttacttaaaggaggcacctaaaacatcatgtttgttgttcgtcgtcatcatca 380
|||||||| ||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct: 383 cgtatgtta--ttaaagg---cacctaaaacatcatgtttgttgttcgtcatcgtcatca 329
Query: 381 ttatacatccttagccaccaccagacccgtacttcttgccgaagacaaccacctggagct 440
| ||| |||||||||| ||||||||||| ||||||||||||||||| | |||||||||||
Sbjct: 328 taatatatccttagccgccaccagacccatacttcttgccgaagacgatcacctggagct 269
Query: 441 tgtcgtacccagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcac 500
||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||
Sbjct: 268 tgtcgtacccagcaaggacaccagcaccagcaacagcacggaggatgtttgccccagcac 209
Query: 501 ccttgaagagggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagc 560
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 208 ccttgaagagggacttggtaccctcctttgcaacaatctgcttgaaagcatccaaggagc 149
Query: 561 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatgg 620
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 148 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtatcaatgg 89
Query: 621 ggtaggaggcaaggccagcaccaatggttataccccacccgagcaagaagctggctaaga 680
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 88 ggtaagaggcaaggccagcaccaatggttataccccagccgagcaagaagctggctaaga 29
Query: 681 agttatcctgcagggtaccaacaagaag 708
|||| |||||||||||||||||||||||
Sbjct: 28 agttgtcctgcagggtaccaacaagaag 1
Score = 48.1 bits (24), Expect = 0.003
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 148 ataaaaaactgatgcagcaaaagcgtctaccc 179
|||||||||||||||||| ||| |||||||||
Sbjct: 551 ataaaaaactgatgcagccaaatcgtctaccc 520
>gb|CF432814.1|CF432814 NIT1_19_B12.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_19_B12_A002 3', mRNA sequence
Length = 608
Score = 658 bits (332), Expect = 0.0
Identities = 471/511 (92%), Gaps = 11/511 (2%)
Strand = Plus / Minus
Query: 206 atttctaacgtcacttatttccaatctctgacataaaaagaggtgcggtcacagccacgc 265
|||||||||||||||||||||||||||| ||| |||||| | ||||||||||||||| |
Sbjct: 506 atttctaacgtcacttatttccaatctccgacgcaaaaagggatgcggtcacagccacac 447
Query: 266 tacaaac---tcaccagcctctgcgagagcgaa-cttaaaat-ggtgtcgagggtccgta 320
||||||| |||||| ||||||||||||| || |||||||| |||||| ||||||| ||
Sbjct: 446 tacaaacaactcaccaacctctgcgagagctaaacttaaaattggtgtccagggtccata 387
Query: 321 cgtatgtttacttaaaggaggcacctaaaacatcatgtttgttgttcgtcgtcatcatca 380
|||||||| ||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct: 386 cgtatgtta--ttaaagg---cacctaaaacatcatgtttgttgttcgtcatcgtcatca 332
Query: 381 ttatacatccttagccaccaccagacccgtacttcttgccgaagacaaccacctggagct 440
| ||| |||||||||| ||||||||||| ||||||||||||||||| | |||||||||||
Sbjct: 331 taatatatccttagccgccaccagacccatacttcttgccgaagacgatcacctggagct 272
Query: 441 tgtcgtacccagcaaggacaccagcaccagctacagcgcg-gaggatgtttgcgccagca 499
||||||||||||||||||||||||||||||| ||||| || |||||||||||| ||||||
Sbjct: 271 tgtcgtacccagcaaggacaccagcaccagcaacagcacgngaggatgtttgccccagca 212
Query: 500 cccttgaagagggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggag 559
|||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||
Sbjct: 211 cccttgaagagggacttggtaccctcctctgcaacaatctgcttgaaagcatccaaggag 152
Query: 560 ctgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatg 619
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 151 ctgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtatcaatg 92
Query: 620 gggtaggaggcaaggccagcaccaatggttataccccacccgagcaagaagctggctaag 679
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 91 gggtaagaggcaaggccagcaccaatggttataccccagccgagcaagaagctggctaag 32
Query: 680 aagttatcctgcagggtaccaacaagaagca 710
||||| |||||||||||||||||||||||||
Sbjct: 31 aagttgtcctgcagggtaccaacaagaagca 1
Score = 58.0 bits (29), Expect = 3e-006
Identities = 52/57 (91%), Gaps = 2/57 (3%)
Strand = Plus / Minus
Query: 87 ccgaaacctacatagataaca-ttcgagcaa-ccctttgcacgcgcaaaacaaaata 141
|||||||| |||||||||||| ||||||||| ||||||||| ||||||||| |||||
Sbjct: 608 ccgaaaccaacatagataacatttcgagcaacccctttgcatgcgcaaaaccaaata 552
>gb|CF483395.1|CF483395 POL1_22_A07.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_22_A07_A002 3', mRNA sequence
Length = 619
Score = 658 bits (332), Expect = 0.0
Identities = 464/503 (92%), Gaps = 10/503 (1%)
Strand = Plus / Minus
Query: 206 atttctaacgtcacttatttccaatctctgacataaaaagaggtgcggtcacagccacgc 265
|||||||||||||||||||||||||||| ||| |||||| | ||||||||||||||| |
Sbjct: 498 atttctaacgtcacttatttccaatctccgacgcaaaaagggatgcggtcacagccacac 439
Query: 266 tacaaac---tcaccagcctctgcgagagcgaa-cttaaaat-ggtgtcgagggtccgta 320
||||||| |||||| ||||||||||||| || |||||||| |||||| ||||||| ||
Sbjct: 438 tacaaacaactcaccaacctctgcgagagctaaacttaaaattggtgtccagggtccata 379
Query: 321 cgtatgtttacttaaaggaggcacctaaaacatcatgtttgttgttcgtcgtcatcatca 380
|||||||| ||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct: 378 cgtatgtta--ttaaagg---cacctaaaacatcatgtttgttgttcgtcatcgtcatca 324
Query: 381 ttatacatccttagccaccaccagacccgtacttcttgccgaagacaaccacctggagct 440
| ||| |||||||||| ||||||||||| ||||||||||||||||| | |||||||||||
Sbjct: 323 taatatatccttagccgccaccagacccatacttcttgccgaagacgatcacctggagct 264
Query: 441 tgtcgtacccagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcac 500
||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||
Sbjct: 263 tgtcgtacccagcaaggacaccagcaccagcaacagcacggaggatgtttgccccagcac 204
Query: 501 ccttgaagagggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagc 560
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 203 ccttgaagagggacttggtaccctcctttgcaacaatctgcttgaaagcatccaaggagc 144
Query: 561 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatgg 620
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 143 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtatcaatgg 84
Query: 621 ggtaggaggcaaggccagcaccaatggttataccccacccgagcaagaagctggctaaga 680
|||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 83 ggtaagaggcaaggccagcaccaatggttataccccagccgagcatgaagctggctaaga 24
Query: 681 agttatcctgcagggtaccaaca 703
|||| ||||||||||||||||||
Sbjct: 23 agttgtcctgcagggtaccaaca 1
Score = 111 bits (56), Expect = 2e-022
Identities = 71/76 (93%)
Strand = Plus / Minus
Query: 66 caaacatagcaagctgtgattccgaaacctacatagataacattcgagcaaccctttgca 125
|||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 619 caaacacagtaagctgtgattccgaaaccaacatagataacattcgagcaaccctttgca 560
Query: 126 cgcgcaaaacaaaata 141
||||||||| |||||
Sbjct: 559 tgcgcaaaaccaaata 544
>gb|BG240308.1|BG240308 OV1_20_D11.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 470
Score = 585 bits (295), Expect = e-165
Identities = 433/474 (91%), Gaps = 10/474 (2%)
Strand = Plus / Minus
Query: 240 aaaaagaggtgcggtcacagccacgctacaaac---tcaccagcctctgcgagagcgaa- 295
|||||| | ||||||||||||||| |||||||| |||||| ||||||||||||| ||
Sbjct: 469 aaaaagggatgcggtcacagccacactacaaacaactcaccaacctctgcgagagctaaa 410
Query: 296 cttaaaat-ggtgtcgagggtccgtacgtatgtttacttaaaggaggcacctaaaacatc 354
|||||||| |||||| ||||||| |||||||||| ||||||| ||| |||||||||
Sbjct: 409 cttaaaattggtgtccagggtccatacgtatgtta--ttaaagg---cacgtaaaacatc 355
Query: 355 atgtttgttgttcgtcgtcatcatcattatacatccttagccaccaccagacccgtactt 414
|||||||||||||||| || ||||||| ||| |||||||||| ||||||||||| |||||
Sbjct: 354 atgtttgttgttcgtcatcgtcatcataatatatccttagccgccaccagacccatactt 295
Query: 415 cttgccgaagacaaccacctggagcttgtcgtacccagcaaggacaccagcaccagctac 474
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 294 cttgccgaagacgatcacctggagcttgtcgtacccagcaaggacaccagcaccagcaac 235
Query: 475 agcgcggaggatgtttgcgccagcacccttgaagagggacttggtaccctcctttgcgac 534
||| || ||||||||||| |||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 234 agcacgtaggatgtttgccccagcacccttgaagagggacttggtaccctcatttgcaac 175
Query: 535 aatctgcttgaaagcgtccaaggagctgttgtacttgacggcctcaccagatgtcatcat 594
||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 174 aatctgcttgaaagcatccaaggagctgttgtacttgtcggcctcaccagatgtcatcat 115
Query: 595 catgcgacggcgaacagtgtcaatggggtaggaggcaaggccagcaccaatggttatacc 654
|||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 114 catgcgacggagaacagtatcaatggggtaagaggcaaggccagcaccaatggttatacc 55
Query: 655 ccacccgagcaagaagctggctaagaagttatcctgcagggtaccaacaagaag 708
||| |||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 54 ccagccgagcaagaagctggataagaagttgtcctgcagggtaccaacaagaag 1
>gb|CF485244.1|CF485244 POL1_30_G09.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_30_G09_A002 3', mRNA sequence
Length = 580
Score = 581 bits (293), Expect = e-164
Identities = 419/456 (91%), Gaps = 10/456 (2%)
Strand = Plus / Minus
Query: 206 atttctaacgtcacttatttccaatctctgacataaaaagaggtgcggtcacagccacgc 265
|||||||||||||||||||||||||||| ||| |||||| | ||||||||||||||| |
Sbjct: 451 atttctaacgtcacttatttccaatctccgacgcaaaaagggatgcggtcacagccacac 392
Query: 266 tacaaac---tcaccagcctctgcgagagcgaa-cttaaaat-ggtgtcgagggtccgta 320
||||||| |||||| ||||||||| ||| || |||||||| |||||| ||||||| ||
Sbjct: 391 tacaaacaactcaccaacctctgcgaaagctaaacttaaaattggtgtccagggtccata 332
Query: 321 cgtatgtttacttaaaggaggcacctaaaacatcatgtttgttgttcgtcgtcatcatca 380
|||||||| ||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct: 331 cgtatgtta--ttaaagg---cacctaaaacatcatgtttgttgttcgtcatcgtcatca 277
Query: 381 ttatacatccttagccaccaccagacccgtacttcttgccgaagacaaccacctggagct 440
| ||| |||||||||| ||||||||||| ||||||||||||||||| | |||||||||||
Sbjct: 276 taatatatccttagccgccaccagacccatacttcttgccgaagacgatcacctggagct 217
Query: 441 tgtcgtacccagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcac 500
||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||
Sbjct: 216 tgtcgtacccagcaaggacaccagcaccagcaacagcacggaggatgtttgccccagcac 157
Query: 501 ccttgaagagggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagc 560
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 156 ccttgaagagggacttggtaccctcctttgcaacaatctgcttgaaagcatccaaggagc 97
Query: 561 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatgg 620
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 96 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtatcaatgg 37
Query: 621 ggtaggaggcaaggccagcaccaatggttatacccc 656
|||| |||||||||||||||||||||||||||||||
Sbjct: 36 ggtaagaggcaaggccagcaccaatggttatacccc 1
Score = 111 bits (56), Expect = 2e-022
Identities = 71/76 (93%)
Strand = Plus / Minus
Query: 66 caaacatagcaagctgtgattccgaaacctacatagataacattcgagcaaccctttgca 125
|||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 572 caaacacagtaagctgtgattccgaaaccaacatagataacattcgagcaaccctttgca 513
Query: 126 cgcgcaaaacaaaata 141
||||||||| |||||
Sbjct: 512 tgcgcaaaaccaaata 497
>gb|AW923529.1|AW923529 DG1_52_E01.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 464
Score = 579 bits (292), Expect = e-163
Identities = 430/470 (91%), Gaps = 11/470 (2%)
Strand = Plus / Minus
Query: 211 taacgtcacttatttccaatctctgacataaaaagaggtgcggtcacagccacgctacaa 270
||||||||||||||||||||||| ||| |||| | | ||||||||||||||| ||||||
Sbjct: 464 taacgtcacttatttccaatctccgacgcaaaagg-gatgcggtcacagccacactacaa 406
Query: 271 ac---tcaccagcctctgcgagagcgaa-cttaaaat-ggtgtcgagggtccgtacgtat 325
|| |||||| ||||||||||||| || |||||||| |||||| ||||||| |||||||
Sbjct: 405 acaactcaccaacctctgcgagagctaaacttaaaattggtgtccagggtccatacgtat 346
Query: 326 gtttacttaaaggaggcacctaaaacatcatgtttgttgttcgtcgtcatcatcattata 385
||| ||||||| ||||||||||||||||||||||||||||| || ||||||| |||
Sbjct: 345 gtta--ttaaagg---cacctaaaacatcatgtttgttgttcgtcatcgtcatcataata 291
Query: 386 catccttagccaccaccagacccgtacttcttgccgaagacaaccacctggagcttgtcg 445
|||||||||| ||||||||||| ||||||||||||||||| | ||||||||||||||||
Sbjct: 290 tatccttagccgccaccagacccatacttcttgccgaagacgatcacctggagcttgtcg 231
Query: 446 tacccagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcacccttg 505
|||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||
Sbjct: 230 tacccagcaaggacaccagcaccagcaacagcacggaggatgtttgccccagcacccttg 171
Query: 506 aagagggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttg 565
|||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 170 aagagggacttggtaccctcctttgcaacaatctgcttgaaagcatccaaggagctgttg 111
Query: 566 tacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtag 625
|||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 110 tacttgacgggctcaccagatgtcatcatcatgcgacggcgaacagtatcaatggggtaa 51
Query: 626 gaggcaaggccagcaccaatggttataccccacccgagcaagaagctggc 675
|||||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 50 gaggcaaggccancaccaatggttataccccagccgagcaagaagctggc 1
>gb|CD228712.1|CD228712 CCC1_9_A11.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_9_A11_A007 3', mRNA sequence
Length = 550
Score = 563 bits (284), Expect = e-158
Identities = 416/455 (91%), Gaps = 10/455 (2%)
Strand = Plus / Minus
Query: 206 atttctaacgtcacttatttccaatctctgacataaaaagaggtgcggtcacagccacgc 265
|||||||||||||||||||||||||||| ||| |||||| | ||||||||||||||| |
Sbjct: 450 atttctaacgtcacttatttccaatctccgacgcaaaaagggatgcggtcacagccacac 391
Query: 266 tacaaac---tcaccagcctctgcgagagcgaa-cttaaaat-ggtgtcgagggtccgta 320
||||||| |||||| ||||||||||||| || |||||||| || ||| ||||||| ||
Sbjct: 390 tacaaacaactcaccaacctctgcgagagctaaacttaaaattggggtccagggtccata 331
Query: 321 cgtatgtttacttaaaggaggcacctaaaacatcatgtttgttgttcgtcgtcatcatca 380
|||||||| ||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct: 330 cgtatgtta--ttaaagg---cacctaaaacatcatgtttgttgttcgtcatcgtcatca 276
Query: 381 ttatacatccttagccaccaccagacccgtacttcttgccgaagacaaccacctggagct 440
| ||| |||||||||| ||||||||||| |||||||||||||| || | |||||||||||
Sbjct: 275 taatatatccttagccgccaccagacccatacttcttgccgaaaacgatcacctggagct 216
Query: 441 tgtcgtacccagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcac 500
||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||
Sbjct: 215 tgtcgtacccagcaaggacaccagcaccagcaacagcacggaggatgtttgccccagcac 156
Query: 501 ccttgaagagggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagc 560
||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 155 ccttgaaaagggacttggtaccctcctttgcaacaatctgcttgaaagcatccaaggagc 96
Query: 561 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatgg 620
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 95 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtatcaatgg 36
Query: 621 ggtaggaggcaaggccagcaccaatggttataccc 655
|||| ||||||||||||||||||||||||||||||
Sbjct: 35 ggtaagaggcaaggccagcaccaatggttataccc 1
Score = 85.7 bits (43), Expect = 1e-014
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 87 ccgaaacctacatagataacattcgagcaaccctttgcacgcgcaaaacaaaata 141
|||||||| |||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 550 ccgaaaccaacatagataacattcgagcaaccctttgcatgcgcaaaaccaaata 496
>gb|BF480940.1|BF480940 FM1_15_C06.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 456
Score = 549 bits (277), Expect = e-154
Identities = 406/444 (91%), Gaps = 10/444 (2%)
Strand = Plus / Minus
Query: 218 acttatttccaatctctgacataaaaagaggtgcggtcacagccacgctacaaac---tc 274
|||||||||||||||| ||| |||||| | ||||||||||||||| |||||||| ||
Sbjct: 443 acttatttccaatctccgacgcaaaaagggatgcggtcacagccacactacaaacaactc 384
Query: 275 accagcctctgcgagagcgaa-cttaaaat-ggtgtcgagggtccgtacgtatgtttact 332
|||| ||||||||||||| || |||||||| |||||| ||||||| |||||||||| |
Sbjct: 383 accaacctctgcgagagctaaacttaaaattggtgtccagggtccatacgtatgtta--t 326
Query: 333 taaaggaggcacctaaaacatcatgtttgttgttcgtcgtcatcatcattatacatcctt 392
|||||| ||||||||||||| ||||||||||||||| || ||||||| ||| ||||||
Sbjct: 325 taaagg---cacctaaaacatcctgtttgttgttcgtcatcgtcatcatcatatatcctt 269
Query: 393 agccaccaccagacccgtacttcttgccgaagacaaccacctggagcttgtcgtacccag 452
|||| ||||||||||| ||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 268 agccgccaccagacccatacttcttgccgaagacgatcacctggagcttgtcgtacccag 209
Query: 453 caaggacaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaagaggg 512
||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |
Sbjct: 208 caaggacaccagcaccagcaacagcacggaggatgtttgcgccagcacccttgaagagtg 149
Query: 513 acttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtacttga 572
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 148 acttggtaccctcctttgcaacaatctgcttgaaagcatccaaggagctgttgtacttga 89
Query: 573 cggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggaggcaa 632
|||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||
Sbjct: 88 cggcctcaccagatgtcatcatcatgcgacggcgaacagtatcaatggggtaagaagcaa 29
Query: 633 ggccagcaccaatggttatacccc 656
||||||||||||||||||||||||
Sbjct: 28 ggccagcaccaatggttatacccc 5
>gb|CF757788.1|CF757788 DSAF1_22_C10.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_22_C10_A011 3', mRNA sequence
Length = 521
Score = 533 bits (269), Expect = e-149
Identities = 389/424 (91%), Gaps = 10/424 (2%)
Strand = Plus / Minus
Query: 206 atttctaacgtcacttatttccaatctctgacataaaaagaggtgcggtcacagccacgc 265
|||||||||||||||||||||||||||| ||| |||||| | ||||||||||||||| |
Sbjct: 419 atttctaacgtcacttatttccaatctccgacgcaaaaagggatgcggtcacagccacac 360
Query: 266 tacaaac---tcaccagcctctgcgagagcgaa-cttaaaat-ggtgtcgagggtccgta 320
||||||| |||||| ||||||||||||| || |||||||| |||||| ||||||| ||
Sbjct: 359 tacaaacaactcaccaacctctgcgagagctaaacttaaaattggtgtccagggtccata 300
Query: 321 cgtatgtttacttaaaggaggcacctaaaacatcatgtttgttgttcgtcgtcatcatca 380
|||||||| ||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct: 299 cgtatgtta--ttaaagg---cacctaaaacatcatgtttgttgttcgtcatcgtcatca 245
Query: 381 ttatacatccttagccaccaccagacccgtacttcttgccgaagacaaccacctggagct 440
| ||| |||||||||| ||||||||||| ||||||||||||||||| | |||||||||||
Sbjct: 244 taatatatccttagccgccaccagacccatacttcttgccgaagacgatcacctggagct 185
Query: 441 tgtcgtacccagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcac 500
||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||
Sbjct: 184 tgtcgtacccagcaaggacaccagcaccagcaacagcacggaggatgtttgccccagcac 125
Query: 501 ccttgaagagggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagc 560
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 124 ccttgaagagggacttggtaccctcctttgcaacaatctgcttgaaagcatccaaggagc 65
Query: 561 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatgg 620
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 64 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtatcaatgg 5
Query: 621 ggta 624
||||
Sbjct: 4 ggta 1
Score = 58.0 bits (29), Expect = 3e-006
Identities = 52/57 (91%), Gaps = 2/57 (3%)
Strand = Plus / Minus
Query: 87 ccgaaacctacatagataaca-ttcgagcaaccc-tttgcacgcgcaaaacaaaata 141
|||||||| |||||||||||| |||||||||||| |||||| ||||||||| |||||
Sbjct: 521 ccgaaaccaacatagataacatttcgagcaacccntttgcatgcgcaaaaccaaata 465
>gb|BG558916.1|BG558916 RHIZ2_52_C09.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 480
Score = 525 bits (265), Expect = e-147
Identities = 388/424 (91%), Gaps = 10/424 (2%)
Strand = Plus / Minus
Query: 206 atttctaacgtcacttatttccaatctctgacataaaaagaggtgcggtcacagccacgc 265
|||||||||||||||||||||||||||| ||| |||||| | ||||||||||||||| |
Sbjct: 420 atttctaacgtcacttatttccaatctccgacgcaaaaagggatgcggtcacagccacac 361
Query: 266 tacaaac---tcaccagcctctgcgagagcgaa-cttaaaat-ggtgtcgagggtccgta 320
||||||| |||||| ||||||||||||| || |||||||| |||||| ||||||| ||
Sbjct: 360 tacaaacaactcaccaacctctgcgagagctaaacttaaaattggtgtccagggtccata 301
Query: 321 cgtatgtttacttaaaggaggcacctaaaacatcatgtttgttgttcgtcgtcatcatca 380
|||||||| ||||||| ||||||||||||| ||||||||||||||| || ||||||
Sbjct: 300 cgtatgtta--ttaaagg---cacctaaaacatcctgtttgttgttcgtcatcgtcatca 246
Query: 381 ttatacatccttagccaccaccagacccgtacttcttgccgaagacaaccacctggagct 440
| ||| |||||||||| ||||||||||| ||||||||||||||||| | |||||||||||
Sbjct: 245 tcatatatccttagccgccaccagacccatacttcttgccgaagacgatcacctggagct 186
Query: 441 tgtcgtacccagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcac 500
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 185 tgtcgtacccagcaaggacaccagcaccagcaacagcacggaggatgtttgcgccagcac 126
Query: 501 ccttgaagagggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagc 560
|||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 125 ccttgaagagtgacttggtaccctcctttgcaacaatctgcttgaaagcatccaaggagc 66
Query: 561 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatgg 620
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 65 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtatcaatgg 6
Query: 621 ggta 624
||||
Sbjct: 5 ggta 2
Score = 48.1 bits (24), Expect = 0.003
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 148 ataaaaaactgatgcagcaaaagcgtctaccc 179
|||||||||||||||||| ||| |||||||||
Sbjct: 468 ataaaaaactgatgcagccaaatcgtctaccc 437
>gb|CF428259.1|CF428259 PH1_14_C06.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_14_C06_A002 3', mRNA sequence
Length = 518
Score = 521 bits (263), Expect = e-146
Identities = 386/422 (91%), Gaps = 10/422 (2%)
Strand = Plus / Minus
Query: 206 atttctaacgtcacttatttccaatctctgacataaaaagaggtgcggtcacagccacgc 265
|||||||||||||||||||||||||||| ||| |||||| | ||||||||||||||| |
Sbjct: 417 atttctaacgtcacttatttccaatctccgacgcaaaaagggatgcggtcacagccacac 358
Query: 266 tacaaac---tcaccagcctctgcgagagcgaa-cttaaaat-ggtgtcgagggtccgta 320
||||||| |||||| ||||||||||||| || || ||||| |||||| ||||||| ||
Sbjct: 357 tacaaacaactcaccaacctctgcgagagctaaactcaaaattggtgtccagggtccata 298
Query: 321 cgtatgtttacttaaaggaggcacctaaaacatcatgtttgttgttcgtcgtcatcatca 380
|||||||| ||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct: 297 cgtatgtta--ttaaagg---cacctaaaacatcatgtttgttgttcgtcatcgtcatca 243
Query: 381 ttatacatccttagccaccaccagacccgtacttcttgccgaagacaaccacctggagct 440
| ||| |||||||||| ||||||||||| ||||||||||||||||| | |||||||||||
Sbjct: 242 taatatatccttagccgccaccagacccatacttcttgccgaagacgatcacctggagct 183
Query: 441 tgtcgtacccagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcac 500
||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||
Sbjct: 182 tgtcgtacccagcaaggacaccagcaccagcaacagcacggaggatgtttgccccagcac 123
Query: 501 ccttgaagagggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagc 560
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 122 ccttgaagagggacttggtaccctcctttgcaacaatctgcttgaaagcatccaaggagc 63
Query: 561 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatgg 620
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 62 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtatcaatgg 3
Query: 621 gg 622
||
Sbjct: 2 gg 1
Score = 87.7 bits (44), Expect = 3e-015
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 86 tccgaaacctacatagataacattcgagcaaccctttgcacgcgcaaaacaaaata 141
||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 518 tccgaaaccaacatagataacattcgagcaaccctttgcatgcgcaaaaccaaata 463
>gb|CF486158.1|CF486158 POL1_36_C07.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_36_C07_A002 3', mRNA sequence
Length = 480
Score = 519 bits (262), Expect = e-145
Identities = 385/421 (91%), Gaps = 10/421 (2%)
Strand = Plus / Minus
Query: 206 atttctaacgtcacttatttccaatctctgacataaaaagaggtgcggtcacagccacgc 265
|||||||||||||||||||||||||||| ||| |||||| | ||||||||||||||| |
Sbjct: 416 atttctaacgtcacttatttccaatctccgacgcaaaaagggatgcggtcacagccacac 357
Query: 266 tacaaac---tcaccagcctctgcgagagcgaa-cttaaaat-ggtgtcgagggtccgta 320
||||||| |||||| ||||||||||||| || |||||||| |||||| |||| || ||
Sbjct: 356 tacaaacaactcaccaacctctgcgagagctaaacttaaaattggtgtccaggggccata 297
Query: 321 cgtatgtttacttaaaggaggcacctaaaacatcatgtttgttgttcgtcgtcatcatca 380
|||||||| ||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct: 296 cgtatgtta--ttaaagg---cacctaaaacatcatgtttgttgttcgtcatcgtcatca 242
Query: 381 ttatacatccttagccaccaccagacccgtacttcttgccgaagacaaccacctggagct 440
| ||| |||||||||| ||||||||||| ||||||||||||||||| | |||||||||||
Sbjct: 241 taatatatccttagccgccaccagacccatacttcttgccgaagacgatcacctggagct 182
Query: 441 tgtcgtacccagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcac 500
||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||
Sbjct: 181 tgtcgtacccagcaaggacaccagcaccagcaacagcacggaggatgtttgccccagcac 122
Query: 501 ccttgaagagggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagc 560
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 121 ccttgaagagggacttggtaccctcctttgcaacaatctgcttgaaagcatccaaggagc 62
Query: 561 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatgg 620
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 61 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtatcaatgg 2
Query: 621 g 621
|
Sbjct: 1 g 1
Score = 48.1 bits (24), Expect = 0.003
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 148 ataaaaaactgatgcagcaaaagcgtctaccc 179
|||||||||||||||||| ||| |||||||||
Sbjct: 464 ataaaaaactgatgcagccaaatcgtctaccc 433
>gb|BF421745.1|BF421745 FM1_16_B02.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 461
Score = 515 bits (260), Expect = e-144
Identities = 383/419 (91%), Gaps = 10/419 (2%)
Strand = Plus / Minus
Query: 206 atttctaacgtcacttatttccaatctctgacataaaaagaggtgcggtcacagccacgc 265
|||||||||||||||||||||||||||| ||| |||||| | ||||||||||||||| |
Sbjct: 414 atttctaacgtcacttatttccaatctccgacgcaaaaagggatgcggtcacagccacac 355
Query: 266 tacaaac---tcaccagcctctgcgagagcgaa-cttaaaat-ggtgtcgagggtccgta 320
||||||| |||||| ||||||||||||| || |||||||| |||||| ||||||| ||
Sbjct: 354 tacaaacaactcaccaacctctgcgagagctaaacttaaaattggtgtccagggtccata 295
Query: 321 cgtatgtttacttaaaggaggcacctaaaacatcatgtttgttgttcgtcgtcatcatca 380
|||||||| ||||||| ||||||||||||| ||||||||||||||| || ||||||
Sbjct: 294 cgtatgtta--ttaaagg---cacctaaaacatcctgtttgttgttcgtcatcgtcatca 240
Query: 381 ttatacatccttagccaccaccagacccgtacttcttgccgaagacaaccacctggagct 440
| ||| |||||||||| ||||||||||| ||||||||||||||||| | |||||||||||
Sbjct: 239 tcatatatccttagccgccaccagacccatacttcttgccgaagacgatcacctggagct 180
Query: 441 tgtcgtacccagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcac 500
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 179 tgtcgtacccagcaaggacaccagcaccagcaacagcacggaggatgtttgcgccagcac 120
Query: 501 ccttgaagagggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagc 560
|||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 119 ccttgaagagtgacttggtaccctcctttgcaacaatctgcttgaaagcatccaaggagc 60
Query: 561 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatg 619
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 59 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtatcaatg 1
Score = 46.1 bits (23), Expect = 0.010
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 149 taaaaaactgatgcagcaaaagcgtctaccc 179
||||||||||||||||| ||| |||||||||
Sbjct: 461 taaaaaactgatgcagccaaatcgtctaccc 431
>gb|BG558575.1|BG558575 RHIZ2_57_F03.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 477
Score = 504 bits (254), Expect = e-140
Identities = 388/425 (91%), Gaps = 12/425 (2%)
Strand = Plus / Minus
Query: 206 atttctaacgtcacttatttccaatctctgacataaaaagaggtgcggtcacagccacgc 265
|||||||||||||||||||||||||||| ||| |||||| | ||||||||||||||| |
Sbjct: 419 atttctaacgtcacttatttccaatctccgacgcaaaaag-gatgcggtcacagccacac 361
Query: 266 tacaaac---tcaccagcctctgcgagagcgaa-cttaaaat-ggtgtcgagggtccgta 320
||||||| |||||| ||||||||||||| || |||||||| |||||| ||||||| ||
Sbjct: 360 tacaaacaactcaccaacctctgcgagagctaaacttaaaattggtgtccagggtccata 301
Query: 321 cgtatgtttacttaaaggaggcacctaaaacatcatgtttgttgttcgtcgtcatcatca 380
|||||||| ||||||| ||||||||||||| ||||||||||||||| || ||||||
Sbjct: 300 cgtatgtta--ttaaagg---cacctaaaacatcctgtttgttgttcgtcatcgtcatca 246
Query: 381 ttatacatccttagccaccaccagacccgtacttcttgccgaagacaaccacctggagct 440
| ||| |||||||||| ||||||||||| ||||||||||||||||| | |||||||||||
Sbjct: 245 tcatatatccttagccgccaccagacccatacttcttgccgaagacgatcacctggagct 186
Query: 441 tgtcgtacccagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcac 500
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 185 tgtcgtacccagcaaggacaccagcaccagcaacagcacggaggatgtttgcgccagcac 126
Query: 501 ccttgaagagggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagc 560
|||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 125 ccttgaagagtgacttggtaccctcctttgcaacaatctgcttgaaagcatccaaggagc 66
Query: 561 tgttgtacttgacggcctcaccagatgtcatcatcatgc-gacggcgaacagtgtcaatg 619
||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 65 tgttgtacttgacggcctcaccagatgtcatcatcatgcggacggcgaacagtatcaatg 6
Query: 620 gggta 624
|||||
Sbjct: 5 gggta 1
>gb|CF760939.1|CF760939 DSAF1_68_H04.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_68_H04_A011 5', mRNA sequence
Length = 351
Score = 496 bits (250), Expect = e-138
Identities = 331/355 (93%), Gaps = 6/355 (1%)
Strand = Plus / Minus
Query: 294 aacttaaaat-ggtgtcgagggtccgtacgtatgtttacttaaaggaggcacctaaaaca 352
|||||||||| |||||| ||||||| |||||||||| ||||||| |||||||||||
Sbjct: 350 aacttaaaattggtgtccagggtccatacgtatgtta--ttaaagg---cacctaaaaca 296
Query: 353 tcatgtttgttgttcgtcgtcatcatcattatacatccttagccaccaccagacccgtac 412
|||||||||||||||||| || ||||||| ||| |||||||||| ||||||||||| |||
Sbjct: 295 tcatgtttgttgttcgtcatcgtcatcataatatatccttagccgccaccagacccatac 236
Query: 413 ttcttgccgaagacaaccacctggagcttgtcgtacccagcaaggacaccagcaccagct 472
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 ttcttgccgaagacgatcacctggagcttgtcgtacccagcaaggacaccagcaccagca 176
Query: 473 acagcgcggaggatgtttgcgccagcacccttgaagagggacttggtaccctcctttgcg 532
||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 175 acagcacggaggatgtttgccccagcacccttgaagagggacttggtaccctcctttgca 116
Query: 533 acaatctgcttgaaagcgtccaaggagctgttgtacttgacggcctcaccagatgtcatc 592
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 acaatctgcttgaaagcatccaaggagctgttgtacttgacggcctcaccagatgtcatc 56
Query: 593 atcatgcgacggcgaacagtgtcaatggggtaggaggcaaggccagcaccaatgg 647
|||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 55 atcatgcgacggcgaacagtatcaatggggtaagaggcaaggccagcaccaatgg 1
>gb|CX609958.1|CX609958 ANR1_15_F10.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_15_F10_A002 5', mRNA sequence
Length = 774
Score = 496 bits (250), Expect = e-138
Identities = 271/278 (97%)
Strand = Plus / Minus
Query: 887 tcattggccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagca 946
|||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 774 tcattggccaaacgtgtacgagcgtagtccagagaatagacaaacaatagagagcaagca 715
Query: 947 ccagcagctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtcc 1006
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 ccagcagctcctccagaagccagatttccagcaaaccacttccagtacccatccttgtcc 655
Query: 1007 ttcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtg 1066
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 654 ttcttaaagttgaacatgcgcctgaagtgatccttgaacgcaaagttcaatgcctgtgtg 595
Query: 1067 gggaagtaacggatgacattagctgtgtttcctctccacagtgagacaaaaccctcatct 1126
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 gggaagtaacggattacattagctgtgtttcctctccacagtgagacaaaaccctcatct 535
Query: 1127 ctgattgtccggccaaagcagtccccaatacccttgta 1164
||||||||||| ||||||||||||||||||||||||||
Sbjct: 534 ctgattgtccgaccaaagcagtccccaatacccttgta 497
>gb|CF479978.1|CF479978 POL1_63_B03.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_63_B03_A002 3', mRNA sequence
Length = 664
Score = 488 bits (246), Expect = e-136
Identities = 267/274 (97%)
Strand = Plus / Minus
Query: 494 ccagcacccttgaagagggacttggtaccctcctttgcgacaatctgcttgaaagcgtcc 553
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 274 ccagcacccttgaagagggacttggtaccctcctttgcaacaatctgcttgaaagcatcc 215
Query: 554 aaggagctgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtg 613
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 aaggagctgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagta 155
Query: 614 tcaatggggtaggaggcaaggccagcaccaatggttataccccacccgagcaagaagctg 673
||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 154 tcaatggggtaagaggcaaggccagcaccaatggttataccccagccgagcaagaagctg 95
Query: 674 gctaagaagttatcctgcagggtaccaacaagaagcactggcttcagggagtcatacata 733
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 gctaagaagttgtcctgcagggtaccaacaagaagcactggcttcagggagtcatacata 35
Query: 734 ccaaagtaaagacctcggtacacaatgatcccca 767
||||||||||||||||||||||||||||| ||||
Sbjct: 34 ccaaagtaaagacctcggtacacaatgattccca 1
Score = 272 bits (137), Expect = 9e-071
Identities = 239/268 (89%), Gaps = 10/268 (3%)
Strand = Plus / Minus
Query: 206 atttctaacgtcacttatttccaatctctgacataaaaagaggtgcggtcacagccacgc 265
|||||||||||||||||||||||||||| ||| |||||| | ||||||||||||||| |
Sbjct: 529 atttctaacgtcacttatttccaatctccgacgcaaaaagggatgcggtcacagccacac 470
Query: 266 tacaaac---tcaccagcctctgcgagagcgaa-cttaaaat-ggtgtcgagggtccgta 320
||||||| |||||| ||||||||||||| || |||||||| |||||| ||||||| ||
Sbjct: 469 tacaaacaactcaccaacctctgcgagagctaaacttaaaattggtgtccagggtccata 410
Query: 321 cgtatgtttacttaaaggaggcacctaaaacatcatgtttgttgttcgtcgtcatcatca 380
|||||||| ||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct: 409 cgtatgtta--ttaaagg---cacctaaaacatcatgtttgttgttcgtcatcgtcatca 355
Query: 381 ttatacatccttagccaccaccagacccgtacttcttgccgaagacaaccacctggagct 440
| ||| |||||||||| ||||||||||| ||||||||||||||||| | |||||||||||
Sbjct: 354 taatatatccttagccgccaccagacccatacttcttgccgaagacgatcacctggagct 295
Query: 441 tgtcgtacccagcaaggacaccagcacc 468
||||||||||||||||||||||||||||
Sbjct: 294 tgtcgtacccagcaaggacaccagcacc 267
Score = 42.1 bits (21), Expect = 0.16
Identities = 51/57 (89%), Gaps = 3/57 (5%)
Strand = Plus / Minus
Query: 88 cgaaacctacata-gataacatt-cgagcaa-ccctttgcacgcgcaaaacaaaata 141
||||||| ||||| ||||||||| ||||||| ||||||||| ||||||||| |||||
Sbjct: 632 cgaaaccaacataagataacatttcgagcaacccctttgcatgcgcaaaaccaaata 576
>gb|CN130330.1|CN130330 RHOH1_40_F09.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_40_F09_A002 5', mRNA sequence
Length = 762
Score = 464 bits (234), Expect = e-128
Identities = 243/246 (98%)
Strand = Plus / Minus
Query: 919 agaatagacaaagaatagagagcaagcaccagcagctccaccagaagccagatttccagc 978
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 762 agaatagacaaagaatagagagcaagcaccagcagctcctccagaagccagatttccagc 703
Query: 979 aaaccacttccagtacccatccttgtccttcttaaagttgaacatgcgcttgaagtgatc 1038
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 aaaccacttccagtacccatccttgtccttcttaaagttgaacatgcgcttgaagtgatc 643
Query: 1039 cttgaacgcaaagttcaatgcctgtgtggggaagtaacggatgacattagctgtgtttcc 1098
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 642 cttgaacgcaaagttcaatgcctgtgtggggaagtaacggattacattagctgtgtttcc 583
Query: 1099 tctccacagtgagacaaaaccctcatctctgattgtccggccaaagcagtccccaatacc 1158
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 582 tctccacagtgagacaaaaccctcatctctgattgtccgaccaaagcagtccccaatacc 523
Query: 1159 cttgta 1164
||||||
Sbjct: 522 cttgta 517
>gb|CX607089.1|CX607089 ANR1_6_D08.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_D08_A002 5', mRNA sequence
Length = 799
Score = 462 bits (233), Expect = e-128
Identities = 248/253 (98%)
Strand = Plus / Minus
Query: 908 gcgtagtccagagaatagacaaagaatagagagcaagcaccagcagctccaccagaagcc 967
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 796 gcgtagtccagagaatagacaaagaatagagagcaagcaccagcagctcctccagaagcc 737
Query: 968 agatttccagcaaaccacttccagtacccatccttgtccttcttaaagttgaacatgcgc 1027
|||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 736 agatttccagcaaaccacttccggtacccatcgttgtccttcttaaagttgaacatgcgc 677
Query: 1028 ttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaagtaacggatgacatta 1087
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 676 ttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaagtaacggattacatta 617
Query: 1088 gctgtgtttcctctccacagtgagacaaaaccctcatctctgattgtccggccaaagcag 1147
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 616 gctgtgtttcctctccacagtgagacaaaaccctcatctctgattgtccgaccaaagcag 557
Query: 1148 tccccaataccct 1160
|||||||||||||
Sbjct: 556 tccccaataccct 544
>gb|CD228805.1|CD228805 CCC1_10_H10.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_10_H10_A007 3', mRNA sequence
Length = 506
Score = 446 bits (225), Expect = e-123
Identities = 363/404 (89%), Gaps = 10/404 (2%)
Strand = Plus / Minus
Query: 206 atttctaacgtcacttatttccaatctctgacataaaaagaggtgcggtcacagccacgc 265
|||||||||||||||||||||||||||| ||| |||||| | ||||||||||||||| |
Sbjct: 399 atttctaacgtcacttatttccaatctccgacgcaaaaagggatgcggtcacagccacac 340
Query: 266 tacaaac---tcaccagcctctgcgagagcgaa-cttaaaat-ggtgtcgagggtccgta 320
||||||| |||||| |||||| |||||| || |||||||| || ||| |||| || ||
Sbjct: 339 tacaaacaactcaccaacctctgggagagctaaacttaaaattggggtccaggggccata 280
Query: 321 cgtatgtttacttaaaggaggcacctaaaacatcatgtttgttgttcgtcgtcatcatca 380
|||||||| ||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct: 279 cgtatgtta--ttaaagg---cacctaaaacatcatgtttgttgttcgtcatcgtcatca 225
Query: 381 ttatacatccttagccaccaccagacccgtacttcttgccgaagacaaccacctggagct 440
| ||| |||||||||| |||||| |||| |||||||||||||| || | |||||||||||
Sbjct: 224 taatatatccttagccgccaccaaacccatacttcttgccgaaaacgaacacctggagct 165
Query: 441 tgtcgtacccagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcac 500
||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||
Sbjct: 164 tgtcgtacccagcaaggacaccagcaccagcaacagcacggaggatgtttgccccagcac 105
Query: 501 ccttgaagagggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagc 560
||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 104 ccttgaaaagggacttggtaccctcctttgcaacaatctgcttgaaagcatccaaggagc 45
Query: 561 tgttgtacttgacggcctcaccagatgtcatcatcatgcgacgg 604
||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 44 tgttgtacttgacggcctcaccaaatgtcatcatcatgcgacgg 1
Score = 77.8 bits (39), Expect = 3e-012
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 87 ccgaaacctacatagataacattcgagcaaccctttgcacgcgcaaaacaaaata 141
|||||||| ||||| |||||||||||||||||||||||| ||||||||| |||||
Sbjct: 499 ccgaaaccaacataaataacattcgagcaaccctttgcatgcgcaaaaccaaata 445
>gb|CF772149.1|CF772149 DSBF1_30_A07.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_30_A07_A010 3', mRNA sequence
Length = 431
Score = 391 bits (197), Expect = e-106
Identities = 279/306 (91%), Gaps = 9/306 (2%)
Strand = Plus / Plus
Query: 1168 tgcctctgtatgcaattgtaacccagatggggagctgctacaagaaggagatcttcaacg 1227
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 111 tgcctctgtatgcaattgtaacccagatgggcagctgctacaagaaggagatcttcaacg 170
Query: 1228 agcatgtgcagcagggcgtcctgggctgggctcagaaggtcaagatgaaaaagggactga 1287
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 171 agcatgtgcagcagggcgtcctgggctgggctcagaaggtcaagatgaggaagggactga 230
Query: 1288 agggagctgcatctgctagcaaggacgaatcgattaccaatgccgattcggcaggacctt 1347
||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 231 agggagctgcagctgctagcaagaacgaatcgacggtcaatgccgattcggcaggacctt 290
Query: 1348 ccgttaagattgaaatggcgaaggct---ggggaggatgttgagatcgttggaaacacag 1404
| ||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||
Sbjct: 291 ctgttaagattgaaatggccaaggctgagggggaggatgttgaggtcgttggaaacacag 350
Query: 1405 gttgat------tgggacaatagggtgcccgtgttgtaatgatataacaggttaatatgc 1458
| |||| ||||||| |||||| |||||||||||||||| ||||| ||| ||||||
Sbjct: 351 ggtgatcagtgatgggacagtagggttcccgtgttgtaatgatgtaacatgttcatatgc 410
Query: 1459 catcat 1464
||||||
Sbjct: 411 catcat 416
>gb|BG464793.1|BG464793 EM1_34_C06.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 271
Score = 363 bits (183), Expect = 3e-098
Identities = 254/273 (93%), Gaps = 4/273 (1%)
Strand = Plus / Minus
Query: 341 gcacctaaaacatcatgtttgttgttcgtcgtcatcatcattatacatccttagccacca 400
|||||||||||||||||||||||||||||| || ||||||| ||| |||||||||| |||
Sbjct: 271 gcacctaaaacatcatgtttgttgttcgtcatcgtcatcataatatatccttagccgcca 212
Query: 401 ccagacccgtacttcttgccgaagacaaccacc-tgga-gcttgtcgtacccagcaagga 458
|||||||| ||||||||||||||||| | |||| |||| |||||||||||||||||||||
Sbjct: 211 ccagacccatacttcttgccgaagacgatcaccntggaagcttgtcgtacccagcaagga 152
Query: 459 caccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaagagggacttgg 518
||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 151 caccagcaccagcaacagcacggaggatgtttgccccagcacccttgaagagggacttgg 92
Query: 519 taccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtacttgacggcct 578
|||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 91 -accctcctttgcaacaatctgcttgaaagcatcc-aggagctgttgtacttgacggcct 34
Query: 579 caccagatgtcatcatcatgcgacggcgaacag 611
|||||||||||||| || |||||||||||||||
Sbjct: 33 caccagatgtcatcntcntgcgacggcgaacag 1
>gb|CL150917.1|CL150917 104_333_10778874_114_31359_042 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10778874, DNA
sequence
Length = 724
Score = 351 bits (177), Expect = 1e-094
Identities = 256/282 (90%), Gaps = 9/282 (3%)
Strand = Plus / Plus
Query: 1192 agatggggagctgctacaagaaggagatcttcaacgagcatgtgcagcagggcgtcctgg 1251
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 agatgggcagctgctacaagaaggagatcttcaacgagcatgtgcagcagggcgtcctgg 490
Query: 1252 gctgggctcagaaggtcaagatgaaaaagggactgaagggagctgcatctgctagcaagg 1311
|||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 491 gctgggctcagaaggtcaagatgaggaagggactgaagggagctgcagctgctagcaaga 550
Query: 1312 acgaatcgattaccaatgccgattcggcaggaccttccgttaagattgaaatggcgaagg 1371
||||||||| | |||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 551 acgaatcgacgatcaatgccgattcggcaggaccttctgttaagattgaaatggccaagg 610
Query: 1372 ct---ggggaggatgttgagatcgttggaaacacaggttgat------tgggacaatagg 1422
|| ||||||||||||||| |||||||||||||||| |||| ||||||| ||||
Sbjct: 611 ctgagggggaggatgttgaggtcgttggaaacacagggtgatcagtgatgggacagtagg 670
Query: 1423 gtgcccgtgttgtaatgatataacaggttaatatgccatcat 1464
|| |||||||||||||||| ||||| ||| ||||||||||||
Sbjct: 671 gttcccgtgttgtaatgatgtaacatgttcatatgccatcat 712
Score = 52.0 bits (26), Expect = 2e-004
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1168 tgcctctgtatgcaattgtaacccag 1193
||||||||||||||||||||||||||
Sbjct: 310 tgcctctgtatgcaattgtaacccag 335
>gb|BG557140.1|BG557140 EM1_43_B01.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 340
Score = 339 bits (171), Expect = 5e-091
Identities = 288/322 (89%), Gaps = 10/322 (3%)
Strand = Plus / Minus
Query: 240 aaaaagaggtgcggtcacagccacgctaca---aactcaccagcctctgcgagagcgaa- 295
|||||| | ||||||||||||||| ||||| ||||||||| ||||||||||||| ||
Sbjct: 317 aaaaagggatgcggtcacagccacactacagacaactcaccaacctctgcgagagctaaa 258
Query: 296 cttaaaat-ggtgtcgagggtccgtacgtatgtttacttaaaggaggcacctaaaacatc 354
|||||||| |||||| ||||||| |||||||||| ||||||| |||||||||||||
Sbjct: 257 cttaaaattggtgtccagggtccatacgtatgtta--ttaaagg---cacctaaaacatc 203
Query: 355 atgtttgttgttcgtcgtcatcatcattatacatccttagccaccaccagacccgtactt 414
|||||||||||||||| || ||||||| ||| |||||||||| ||||||||||| |||||
Sbjct: 202 atgtttgttgttcgtcatcttcatcataatatatccttagccgccaccagacccatactt 143
Query: 415 cttgccgaagacaaccacctggagcttgtcgtacccagcaaggacaccagcaccagctac 474
||||||||||| | ||||||||||||| || ||||||||||||||||||||||||| ||
Sbjct: 142 gttgccgaagacgatcacctggagcttgacgaacccagcaaggacaccagcaccagcaac 83
Query: 475 agcgcggaggatgtttgcgccagcacccttgaagagggacttggtaccctcctttgcgac 534
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 82 agcacggaggatgtttgccccagcacccttgaagagggacttggtaccctcctttgcaac 23
Query: 535 aatctgcttgaaagcgtccaag 556
||||||||||||||| ||||||
Sbjct: 22 aatctgcttgaaagcatccaag 1
>gb|CX620023.1|CX620023 GABR1_49_H09.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_49_H09_A002 3', mRNA sequence
Length = 440
Score = 329 bits (166), Expect = 5e-088
Identities = 283/317 (89%), Gaps = 10/317 (3%)
Strand = Plus / Minus
Query: 206 atttctaacgtcacttatttccaatctctgacataaaaagaggtgcggtcacagccacgc 265
|||||||||||||||||||||||||||| ||| |||||| | ||||||||||||||| |
Sbjct: 312 atttctaacgtcacttatttccaatctccgacgcaaaaagggatgcggtcacagccacac 253
Query: 266 tacaaac---tcaccagcctctgcgagagcgaa-cttaaaat-ggtgtcgagggtccgta 320
||||||| |||||| ||||||||||||| || |||||||| |||||| ||||||| ||
Sbjct: 252 tacaaacaactcaccaacctctgcgagagctaaacttaaaattggtgtccagggtccata 193
Query: 321 cgtatgtttacttaaaggaggcacctaaaacatcatgtttgttgttcgtcgtcatcatca 380
|||||||| ||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct: 192 cgtatgtta--ttaaagg---cacctaaaacatcatgtttgttgttcgtcatcgtcatca 138
Query: 381 ttatacatccttagccaccaccagacccgtacttcttgccgaagacaaccacctggagct 440
| ||| |||||||||| ||||||||||| |||||||||||||| || | |||||||||||
Sbjct: 137 taatatatccttagccgccaccagacccatacttcttgccgaaaacgatcacctggagct 78
Query: 441 tgtcgtacccagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcac 500
||||| ||||||||||||||||||||||||| ||||| |||||||||||||| |||||||
Sbjct: 77 tgtcgaacccagcaaggacaccagcaccagcaacagcacggaggatgtttgccccagcac 18
Query: 501 ccttgaagagggacttg 517
|||||||||||||||||
Sbjct: 17 ccttgaagagggacttg 1
Score = 111 bits (56), Expect = 2e-022
Identities = 71/76 (93%)
Strand = Plus / Minus
Query: 66 caaacatagcaagctgtgattccgaaacctacatagataacattcgagcaaccctttgca 125
|||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 433 caaacacagtaagctgtgattccgaaaccaacatagataacattcgagcaaccctttgca 374
Query: 126 cgcgcaaaacaaaata 141
||||||||| |||||
Sbjct: 373 tgcgcaaaaccaaata 358
>gb|CL151033.1|CL151033 104_333_10778955_114_31359_123 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10778955, DNA
sequence
Length = 649
Score = 315 bits (159), Expect = 7e-084
Identities = 203/217 (93%), Gaps = 3/217 (1%)
Strand = Plus / Plus
Query: 1192 agatggggagctgctacaagaaggagatcttcaacgagcatgtgcagcagggcgtcctgg 1251
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 agatgggcagctgctacaagaaggagatcttcaacgagcatgtgcagcagggcgtcctgg 490
Query: 1252 gctgggctcagaaggtcaagatgaaaaagggactgaagggagctgcatctgctagcaagg 1311
|||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 491 gctgggctcagaaggtcaagatgaggaagggactgaagggagctgcagctgctagcaaga 550
Query: 1312 acgaatcgattaccaatgccgattcggcaggaccttccgttaagattgaaatggcgaagg 1371
||||||||| | |||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 551 acgaatcgacgatcaatgccgattcggcaggaccttctgttaagattgaaatggccaagg 610
Query: 1372 ct---ggggaggatgttgagatcgttggaaacacagg 1405
|| ||||||||||||||| ||||||||||||||||
Sbjct: 611 ctgagggggaggatgttgaggtcgttggaaacacagg 647
Score = 52.0 bits (26), Expect = 2e-004
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1168 tgcctctgtatgcaattgtaacccag 1193
||||||||||||||||||||||||||
Sbjct: 310 tgcctctgtatgcaattgtaacccag 335
>gb|CF428344.1|CF428344 PH1_14_C06.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_14_C06_A002 5', mRNA sequence
Length = 629
Score = 291 bits (147), Expect = 1e-076
Identities = 153/155 (98%)
Strand = Plus / Minus
Query: 1010 ttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtgggg 1069
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 ttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtgggg 570
Query: 1070 aagtaacggatgacattagctgtgtttcctctccacagtgagacaaaaccctcatctctg 1129
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 aagtaacggattacattagctgtgtttcctctccacagtgagacaaaaccctcatctctg 510
Query: 1130 attgtccggccaaagcagtccccaatacccttgta 1164
|||||||| ||||||||||||||||||||||||||
Sbjct: 509 attgtccgaccaaagcagtccccaatacccttgta 475
>gb|CF761443.1|CF761443 DSAF1_75_C05.b1_A011 Drought-stressed after flowering Sorghum bicolor
cDNA clone DSAF1_75_C05_A011 5', mRNA sequence
Length = 529
Score = 289 bits (146), Expect = 4e-076
Identities = 152/154 (98%)
Strand = Plus / Minus
Query: 1011 taaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtgggga 1070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 taaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtgggga 470
Query: 1071 agtaacggatgacattagctgtgtttcctctccacagtgagacaaaaccctcatctctga 1130
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 agtaacggattacattagctgtgtttcctctccacagtgagacaaaaccctcatctctga 410
Query: 1131 ttgtccggccaaagcagtccccaatacccttgta 1164
||||||| ||||||||||||||||||||||||||
Sbjct: 409 ttgtccgaccaaagcagtccccaatacccttgta 376
>gb|AW286539.1|AW286539 LG1_334_B07.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 492
Score = 283 bits (143), Expect = 2e-074
Identities = 222/248 (89%), Gaps = 9/248 (3%)
Strand = Plus / Plus
Query: 1226 cgagcatgtgcagcagggcgtcctgggctgggctcagaaggtcaagatgaaaaagggact 1285
||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 1 cgagcatgtgcagcagggcgtcccgggctgggctcagaaggtcaagatgaggaagggact 60
Query: 1286 gaagggagctgcatctgctagcaaggacgaatcgattaccaatgccgattcggcaggacc 1345
||||||||||||| ||||||||||| ||||||||| | |||||||||||||||||||||
Sbjct: 61 gaagggagctgcagctgctagcaagaacgaatcgacgatcaatgccgattcggcaggacc 120
Query: 1346 ttccgttaagattgaaatggcgaaggct---ggggaggatgttgagatcgttggaaacac 1402
||| ||||||||||||||||| |||||| ||||||||||||||| |||||||||||||
Sbjct: 121 ttctgttaagattgaaatggccaaggctgagggggaggatgttgaggtcgttggaaacac 180
Query: 1403 aggttgat------tgggacaatagggtgcccgtgttgtaatgatataacaggttaatat 1456
||| |||| ||||||| |||||| |||||||||||||||| ||||| ||| ||||
Sbjct: 181 agggtgatcagtgatgggacagtagggttcccgtgttgtaatgatgtaacatgttcatat 240
Query: 1457 gccatcat 1464
||||||||
Sbjct: 241 gccatcat 248
>gb|CL151034.1|CL151034 104_333_10778955_116_31360_123 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10778955, DNA
sequence
Length = 725
Score = 278 bits (140), Expect = 2e-072
Identities = 216/241 (89%), Gaps = 9/241 (3%)
Strand = Plus / Minus
Query: 1233 gtgcagcagggcgtcctgggctgggctcagaaggtcaagatgaaaaagggactgaaggga 1292
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 725 gtgcagcagggcgtcctgggctgggctcagaaggtcaagatgaggaagggactgaaggga 666
Query: 1293 gctgcatctgctagcaaggacgaatcgattaccaatgccgattcggcaggaccttccgtt 1352
|||||| ||||||||||| ||||||||| | |||||||||||||||||||||||| |||
Sbjct: 665 gctgcagctgctagcaagaacgaatcgacgatcaatgccgattcggcaggaccttctgtt 606
Query: 1353 aagattgaaatggcgaaggct---ggggaggatgttgagatcgttggaaacacaggttga 1409
|||||||||||||| |||||| ||||||||||||||| |||||||||||||||| |||
Sbjct: 605 aagattgaaatggccaaggctgagggggaggatgttgaggtcgttggaaacacagggtga 546
Query: 1410 t------tgggacaatagggtgcccgtgttgtaatgatataacaggttaatatgccatca 1463
| ||||||| |||||| |||||||||||||||| ||||| ||| |||||||||||
Sbjct: 545 tcagtgatgggacagtagggttcccgtgttgtaatgatgtaacatgttcatatgccatca 486
Query: 1464 t 1464
|
Sbjct: 485 t 485
>gb|CL150918.1|CL150918 104_333_10778874_116_31360_042 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10778874, DNA
sequence
Length = 716
Score = 260 bits (131), Expect = 4e-067
Identities = 207/232 (89%), Gaps = 9/232 (3%)
Strand = Plus / Minus
Query: 1242 ggcgtcctgggctgggctcagaaggtcaagatgaaaaagggactgaagggagctgcatct 1301
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct: 716 ggcgtcctgggctgggctcagaaggtcaagatgaggaagggactgaagggagctgcagct 657
Query: 1302 gctagcaaggacgaatcgattaccaatgccgattcggcaggaccttccgttaagattgaa 1361
||||||||| ||||||||| | |||||||||||||||||||||||| ||||||||||||
Sbjct: 656 gctagcaagaacgaatcgacgatcaatgccgattcggcaggaccttctgttaagattgaa 597
Query: 1362 atggcgaaggct---ggggaggatgttgagatcgttggaaacacaggttgat------tg 1412
||||| |||||| ||||||||||||||| |||||||||||||||| |||| ||
Sbjct: 596 atggccaaggctgagggggaggatgttgaggtcgttggaaacacagggtgatcagtgatg 537
Query: 1413 ggacaatagggtgcccgtgttgtaatgatataacaggttaatatgccatcat 1464
||||| |||||| |||||||||||||||| ||||| ||| ||||||||||||
Sbjct: 536 ggacagtagggttcccgtgttgtaatgatgtaacatgttcatatgccatcat 485
>gb|CN140907.1|CN140907 OX1_47_H11.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_47_H11_A002 5', mRNA sequence
Length = 662
Score = 228 bits (115), Expect = 1e-057
Identities = 121/123 (98%)
Strand = Plus / Minus
Query: 1042 gaacgcaaagttcaatgcctgtgtggggaagtaacggatgacattagctgtgtttcctct 1101
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 662 gaacgcaaagttcaatgcctgtgtggggaagtaacggattacattagctgtgtttcctct 603
Query: 1102 ccacagtgagacaaaaccctcatctctgattgtccggccaaagcagtccccaataccctt 1161
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 602 ccacagtgagacaaaaccctcatctctgattgtccgaccaaagcagtccccaataccctt 543
Query: 1162 gta 1164
|||
Sbjct: 542 gta 540
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 355,111
Number of Sequences: 832831
Number of extensions: 355111
Number of successful extensions: 96068
Number of sequences better than 0.5: 334
Number of HSP's better than 0.5 without gapping: 329
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 95131
Number of HSP's gapped (non-prelim): 730
length of query: 1589
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1569
effective length of database: 474,703,049
effective search space: 744809083881
effective search space used: 744809083881
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)