BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.355
(842 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD432572.1|CD432572 ETH1_30_E04.g1_A002 Ethylene-treated... 811 0.0
gb|BE357369.1|BE357369 DG1_148_A05.g1_A002 Dark Grown 1 (DG... 809 0.0
gb|CX607748.1|CX607748 ANR1_30_B07.g1_A002 Anaerobic roots ... 795 0.0
gb|CX607662.1|CX607662 ANR1_30_B07.b1_A002 Anaerobic roots ... 720 0.0
gb|AI724242.1|AI724242 RHIZ1_8_B12.y2_A001 Rhizome1 (RHIZ1)... 519 e-145
gb|CF772707.1|CF772707 DSBF1_38_D05.g1_A010 Drought-stresse... 466 e-129
gb|CW188377.1|CW188377 104_608_11172997_148_36734_061 Sorgh... 464 e-129
gb|CW191309.1|CW191309 104_613_11178426_116_36942_075 Sorgh... 464 e-129
gb|CW129063.1|CW129063 104_511_11114353_148_34760_015 Sorgh... 456 e-126
gb|CW297850.1|CW297850 104_780_11462260_116_35647_012 Sorgh... 456 e-126
gb|AI724175.1|AI724175 RHIZ1_8_A04.y2_A001 Rhizome1 (RHIZ1)... 456 e-126
gb|BG052252.1|BG052252 RHIZ2_12_B05.g1_A003 Rhizome2 (RHIZ2... 448 e-124
gb|BG102543.1|BG102543 RHIZ2_34_D04.g1_A003 Rhizome2 (RHIZ2... 448 e-124
gb|CW319235.1|CW319235 104_811_11474377_148_35884_003 Sorgh... 446 e-123
gb|CW417908.1|CW417908 fsbb001f121c05f0 Sorghum methylation... 446 e-123
gb|AW680031.1|AW680031 WS1_34_A02.g1_A002 Water-stressed 1 ... 446 e-123
gb|BE355360.1|BE355360 DG1_114_A03.b1_A002 Dark Grown 1 (DG... 446 e-123
gb|BE355526.1|BE355526 DG1_114_A03.g1_A002 Dark Grown 1 (DG... 446 e-123
gb|BG410872.1|BG410872 EM1_27_A01.g1_A002 Embryo 1 (EM1) So... 446 e-123
gb|BE592378.1|BE592378 WS1_94_A05.g1_A002 Water-stressed 1 ... 442 e-122
gb|BE917707.1|BE917707 OV1_6_B04.b1_A002 Ovary 1 (OV1) Sorg... 440 e-122
gb|BF704683.1|BF704683 FM1_50_B08.b1_A003 Floral-Induced Me... 434 e-120
gb|CF071535.1|CF071535 FE1_17_C03.b1_A002 Iron-deficient se... 432 e-119
gb|BG488106.1|BG488106 RHIZ2_63_D10.g1_A003 Rhizome2 (RHIZ2... 426 e-117
gb|BG488416.1|BG488416 RHIZ2_63_D10.b1_A003 Rhizome2 (RHIZ2... 426 e-117
gb|CW306661.1|CW306661 104_792_11466961_148_35713_007 Sorgh... 420 e-116
gb|AW564395.1|AW564395 LG1_292_F12.b1_A002 Light Grown 1 (L... 420 e-116
gb|BE593143.1|BE593143 WS1_98_A10.g1_A002 Water-stressed 1 ... 420 e-116
gb|CD431873.1|CD431873 ETH1_11_A02.g1_A002 Ethylene-treated... 420 e-116
gb|CN150853.1|CN150853 WOUND1_71_G11.g1_A002 Wounded leaves... 420 e-116
gb|CW128767.1|CW128767 104_510_11114194_148_34755_039 Sorgh... 418 e-115
gb|BF481909.1|BF481909 FM1_22_H04.g1_A003 Floral-Induced Me... 418 e-115
gb|BG240440.1|BG240440 OV1_30_A12.b1_A002 Ovary 1 (OV1) Sor... 418 e-115
gb|BE917630.1|BE917630 OV1_6_B04.g1_A002 Ovary 1 (OV1) Sorg... 416 e-114
gb|BG411209.1|BG411209 EM1_27_A01.b1_A002 Embryo 1 (EM1) So... 414 e-114
gb|CF071274.1|CF071274 FE1_16_D02.g1_A002 Iron-deficient se... 414 e-114
gb|BF656458.1|BF656458 FM1_50_B08.g1_A003 Floral-Induced Me... 412 e-113
gb|CN125957.1|CN125957 RHOH1_14_H01.b1_A002 Acid- and alkal... 412 e-113
gb|CN126047.1|CN126047 RHOH1_14_H01.g1_A002 Acid- and alkal... 412 e-113
gb|CX608442.1|CX608442 ANR1_38_D08.g1_A002 Anaerobic roots ... 412 e-113
gb|AW745446.1|AW745446 WS1_34_A02.b1_A002 Water-stressed 1 ... 410 e-113
gb|CF074009.1|CF074009 FE1_9_D12.g1_A002 Iron-deficient see... 410 e-113
gb|CF072752.1|CF072752 FE1_25_E07.g1_A002 Iron-deficient se... 406 e-111
gb|CW088567.1|CW088567 104_433_10948227_116_32575_006 Sorgh... 404 e-111
gb|CW317075.1|CW317075 104_808_11473223_116_35851_084 Sorgh... 398 e-109
gb|BZ341857.1|BZ341857 ic79b05.g1 WGS-SbicolorF (JM107 adap... 392 e-107
gb|CL152064.1|CL152064 104_335_10779694_116_31364_094 Sorgh... 392 e-107
gb|CW155043.1|CW155043 104_557_11145924_116_36362_042 Sorgh... 392 e-107
gb|CW155044.1|CW155044 104_557_11145924_148_36361_042 Sorgh... 392 e-107
gb|BF480763.1|BF480763 FM1_14_F11.g1_A003 Floral-Induced Me... 392 e-107
gb|CD213618.1|CD213618 HS1_52_G12.b1_A012 Heat-shocked seed... 392 e-107
gb|CD213713.1|CD213713 HS1_52_G12.g1_A012 Heat-shocked seed... 392 e-107
gb|CX606979.1|CX606979 ANR1_6_B05.b1_A002 Anaerobic roots S... 392 e-107
gb|CX607063.1|CX607063 ANR1_6_B05.g1_A002 Anaerobic roots S... 392 e-107
gb|CX610420.1|CX610420 ANR1_18_D02.g1_A002 Anaerobic roots ... 392 e-107
gb|BE593453.1|BE593453 WS1_98_A10.b1_A002 Water-stressed 1 ... 391 e-107
gb|AI724884.1|AI724884 RHIZ1_30_G03.y3_A001 Rhizome1 (RHIZ1... 387 e-105
gb|CW410848.1|CW410848 fsbb001f105m09k0 Sorghum methylation... 385 e-105
gb|AI723845.1|AI723845 RHIZ1_28_B06.y1_A001 Rhizome1 (RHIZ1... 383 e-104
gb|CW361905.1|CW361905 fsbb001f030l13f0 Sorghum methylation... 381 e-104
gb|CW410847.1|CW410847 fsbb001f105m09f0 Sorghum methylation... 379 e-103
gb|BG049096.1|BG049096 OV1_23_C04.g1_A002 Ovary 1 (OV1) Sor... 379 e-103
gb|CD462726.1|CD462726 ETH1_39_B03.g1_A002 Ethylene-treated... 379 e-103
gb|CW183462.1|CW183462 104_599_11164629_148_36672_089 Sorgh... 373 e-101
gb|BE599367.1|BE599367 PI1_88_F07.g1_A002 Pathogen induced ... 373 e-101
gb|CD464058.1|CD464058 ETH1_48_H05.b1_A002 Ethylene-treated... 373 e-101
gb|CW182557.1|CW182557 104_598_11164141_116_36663_061 Sorgh... 371 e-101
gb|BF480894.1|BF480894 FM1_14_F11.b1_A003 Floral-Induced Me... 363 2e-098
gb|BE355445.1|BE355445 DG1_114_A03.b2_A002 Dark Grown 1 (DG... 355 4e-096
gb|CF431776.1|CF431776 NIT1_9_B03.b1_A002 Nitrogen-deficien... 351 7e-095
gb|BF482021.1|BF482021 FM1_22_H04.b1_A003 Floral-Induced Me... 347 1e-093
gb|CW105327.1|CW105327 104_474_11012845_116_34450_053 Sorgh... 345 4e-093
gb|CW394994.1|CW394994 fsbb001f082n15f0 Sorghum methylation... 345 4e-093
gb|CW112587.1|CW112587 104_486_11104970_116_34548_007 Sorgh... 341 6e-092
gb|CW463246.1|CW463246 fsbb001f211m02f0 Sorghum methylation... 341 6e-092
gb|BG049237.1|BG049237 OV1_17_D01.g1_A002 Ovary 1 (OV1) Sor... 333 2e-089
gb|BE592516.1|BE592516 WS1_94_A05.b1_A002 Water-stressed 1 ... 331 6e-089
gb|CW191310.1|CW191310 104_613_11178426_148_36941_075 Sorgh... 325 4e-087
gb|BE599532.1|BE599532 PI1_88_F07.b1_A002 Pathogen induced ... 319 2e-085
gb|CF484983.1|CF484983 POL1_28_F02.g1_A002 Pollen Sorghum b... 309 2e-082
gb|AW286565.1|AW286565 LG1_334_E01.g1_A002 Light Grown 1 (L... 307 9e-082
gb|CF431835.1|CF431835 NIT1_9_B03.g1_A002 Nitrogen-deficien... 285 3e-075
gb|CW306660.1|CW306660 104_792_11466961_116_35709_007 Sorgh... 281 5e-074
gb|CW432220.1|CW432220 fsbb001f146m24f0 Sorghum methylation... 281 5e-074
gb|CW156116.1|CW156116 104_558_11146509_148_36368_081 Sorgh... 278 8e-073
gb|BG240054.1|BG240054 OV1_17_D01.b1_A002 Ovary 1 (OV1) Sor... 274 1e-071
gb|BG558204.1|BG558204 RHIZ2_64_D04.b1_A003 Rhizome2 (RHIZ2... 268 8e-070
gb|BF704815.1|BF704815 FM1_51_H04.b1_A003 Floral-Induced Me... 260 2e-067
gb|CN150769.1|CN150769 WOUND1_71_G11.b1_A002 Wounded leaves... 260 2e-067
gb|CW088569.1|CW088569 104_433_10948227_251_32621_006 Sorgh... 258 7e-067
gb|BG052312.1|BG052312 RHIZ2_12_B05.b1_A003 Rhizome2 (RHIZ2... 258 7e-067
gb|BG102866.1|BG102866 RHIZ2_34_D04.b1_A003 Rhizome2 (RHIZ2... 258 7e-067
gb|CW182558.1|CW182558 104_598_11164141_148_36664_061 Sorgh... 256 3e-066
gb|CW105328.1|CW105328 104_474_11012845_148_34446_053 Sorgh... 248 7e-064
gb|CL159717.1|CL159717 104_349_10804465_114_31381_289 Sorgh... 244 1e-062
gb|BG048803.1|BG048803 OV1_23_C04.b1_A002 Ovary 1 (OV1) Sor... 244 1e-062
gb|CW490111.1|CW490111 fsbb001f275g08k0 Sorghum methylation... 242 4e-062
gb|CW070741.1|CW070741 104_322_10590964_114_30544 Sorghum m... 232 4e-059
gb|CW104944.1|CW104944 104_474_11012677_148_34448_061 Sorgh... 216 2e-054
gb|CW394995.1|CW394995 fsbb001f082n15k0 Sorghum methylation... 196 2e-048
gb|CW415400.1|CW415400 fsbb001f115h21f0 Sorghum methylation... 184 9e-045
gb|CF430869.1|CF430869 NIT1_1_E01.b1_A002 Nitrogen-deficien... 182 3e-044
gb|BF656582.1|BF656582 FM1_51_H04.g1_A003 Floral-Induced Me... 180 1e-043
gb|CW227263.1|CW227263 104_665_11205321_148_37224_037 Sorgh... 168 5e-040
gb|BG560769.1|BG560769 RHIZ2_64_D04.g1_A003 Rhizome2 (RHIZ2... 168 5e-040
gb|AI723852.1|AI723852 RHIZ1_28_C06.y1_A001 Rhizome1 (RHIZ1... 161 1e-037
gb|AW677105.1|AW677105 DG1_4_H07.b1_A002 Dark Grown 1 (DG1)... 153 3e-035
gb|CW424980.1|CW424980 fsbb001f135j06f0 Sorghum methylation... 147 2e-033
gb|BE353104.1|BE353104 DG1_4_H07.g1_A002 Dark Grown 1 (DG1)... 139 5e-031
gb|CD431850.1|CD431850 ETH1_11_D10.g1_A002 Ethylene-treated... 135 7e-030
gb|CW113300.1|CW113300 104_487_11105369_148_34551_071 Sorgh... 125 7e-027
gb|CW104943.1|CW104943 104_474_11012677_116_34452_061 Sorgh... 115 7e-024
gb|BE358231.1|BE358231 DG1_26_E04.b2_A002 Dark Grown 1 (DG1... 115 7e-024
gb|BE357302.1|BE357302 DG1_148_A05.b1_A002 Dark Grown 1 (DG... 111 1e-022
gb|AI724525.1|AI724525 RHIZ1_37_E01.y1_A001 Rhizome1 (RHIZ1... 109 4e-022
gb|CW088568.1|CW088568 104_433_10948227_250_32620_006 Sorgh... 84 2e-014
gb|CW088566.1|CW088566 104_433_10948227_114_32572_006 Sorgh... 78 1e-012
gb|CW415401.1|CW415401 fsbb001f115h21k0 Sorghum methylation... 72 9e-011
gb|CL152063.1|CL152063 104_335_10779694_114_31363_094 Sorgh... 66 6e-009
gb|CW070742.1|CW070742 104_322_10590964_116_30543 Sorghum m... 66 6e-009
gb|CF483259.1|CF483259 POL1_21_A09.b1_A002 Pollen Sorghum b... 66 6e-009
gb|CW238284.1|CW238284 104_695_11216646_148_37417_029 Sorgh... 62 9e-008
gb|CW344083.1|CW344083 104_846_11487770_116_36196_005 Sorgh... 60 3e-007
gb|CW049116.1|CW049116 104_288_10513836_114_30200 Sorghum m... 58 1e-006
gb|CW424981.1|CW424981 fsbb001f135j06k0 Sorghum methylation... 58 1e-006
gb|CW317076.1|CW317076 104_808_11473223_148_35855_084 Sorgh... 56 5e-006
gb|BE358843.1|BE358843 DG1_32_D03.g1_A002 Dark Grown 1 (DG1... 56 5e-006
gb|CW105329.1|CW105329 104_474_11012845_148_34479_053 Sorgh... 50 3e-004
gb|AW282719.1|AW282719 LG1_292_F12.g1_A002 Light Grown 1 (L... 50 3e-004
gb|CF434162.1|CF434162 NIT1_32_H03.g1_A002 Nitrogen-deficie... 50 3e-004
gb|CL179294.1|CL179294 104_388_10895213_148_31909_125 Sorgh... 44 0.021
gb|CL170389.1|CL170389 104_371_10813777_116_31791_097 Sorgh... 40 0.32
gb|CL186013.1|CL186013 104_400_10899928_116_32405_056 Sorgh... 40 0.32
gb|CW026197.1|CW026197 104_252_10497812_114_30513 Sorghum m... 40 0.32
gb|CW133966.1|CW133966 104_518_11117050_148_34817_047 Sorgh... 40 0.32
gb|CW233439.1|CW233439 104_686_11213422_116_37376_085 Sorgh... 40 0.32
gb|CW252274.1|CW252274 104_715_11224407_116_35096_060 Sorgh... 40 0.32
gb|CW278768.1|CW278768 104_753_11406722_116_35426_009 Sorgh... 40 0.32
gb|CW333757.1|CW333757 104_832_11482134_116_36058_031 Sorgh... 40 0.32
gb|CW333758.1|CW333758 104_832_11482134_148_36057_031 Sorgh... 40 0.32
gb|CW336928.1|CW336928 104_836_11483863_116_36110_024 Sorgh... 40 0.32
gb|CW336929.1|CW336929 104_836_11483863_148_36106_024 Sorgh... 40 0.32
gb|CW405940.1|CW405940 fsbb001f098l16f0 Sorghum methylation... 40 0.32
gb|CW405941.1|CW405941 fsbb001f098l16k0 Sorghum methylation... 40 0.32
gb|CW408451.1|CW408451 fsbb001f102f15f0 Sorghum methylation... 40 0.32
gb|CW473767.1|CW473767 fsbb001f229e18f0 Sorghum methylation... 40 0.32
gb|CW477483.1|CW477483 fsbb001f234n11f0 Sorghum methylation... 40 0.32
gb|BE600943.1|BE600943 PI1_95_A11.b1_A002 Pathogen induced ... 40 0.32
gb|AF466200.2| Sorghum bicolor putative protein kinase gene... 40 0.32
>gb|CD432572.1|CD432572 ETH1_30_E04.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_30_E04_A002 5', mRNA sequence
Length = 667
Score = 811 bits (409), Expect = 0.0
Identities = 503/533 (94%), Gaps = 1/533 (0%)
Strand = Plus / Minus
Query: 258 agcactggcctaaaagtacgaggaaacgaaacagagccgtcgctccgtgcggcggcgatc 317
|||||||||||||| |||||||||||||||| |||| || || ||| ||||| |
Sbjct: 572 agcactggcctaaacacacgaggaaacgaaacaagaccgtagcaccatgcagcggcagcc 513
Query: 318 taagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagc 377
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 512 taagaggaagtaaacttggtaacagccttggtgccctcggagacggcgtgcttggcgagc 453
Query: 378 tcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttc 437
||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 452 tcgccgggaaggacgaggcgcaccgacgtctggatctcccgggaggtgatggtgggcttc 393
Query: 438 ttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatg 497
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 392 ttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatg 333
Query: 498 aaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgcttg 557
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 332 aaggagttcatgatggacatggccttggaggagataccaatgtccgggtgcacctgcttg 273
Query: 558 agcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttcccc 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 agcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttcccc 213
Query: 618 ttcttctcgccgccctccttgcccggcacgcgcttctccgccctgggcttcttctcggcc 677
||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||
Sbjct: 212 ttcttctcgccgccctccttgccggggacgcgtttctccgccctgggcttcttctcggcc 153
Query: 678 ttctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccatcgggaat 737
|||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 152 ttctcctccgccggcttcttctccgcgggcttcttctcggccttgggcgccatcagtaa- 94
Query: 738 tcgatcaaatggagcggcgaacgcgggatgggaagcggcggattgggaatttg 790
||||||||||||||||||||||||| | ||||||||||||||||| |||||||
Sbjct: 93 tcgatcaaatggagcggcgaacgcgaggtgggaagcggcggattgcgaatttg 41
>gb|BE357369.1|BE357369 DG1_148_A05.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 616
Score = 809 bits (408), Expect = 0.0
Identities = 490/516 (94%), Gaps = 1/516 (0%)
Strand = Plus / Minus
Query: 275 acgaggaaacgaaacagagccgtcgctccgtgcggcggcgatctaagaggaagtaaactt 334
|||||||||||||||| | |||| || || ||| ||||| ||||||||||||||||||
Sbjct: 544 acgaggaaacgaaacaaaaccgtagcaccatgcagcggcagcctaagaggaagtaaactt 485
Query: 335 ggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaaggacgag 394
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 484 ggtaacagccttggtgccctcggagacggcgtgcttggcgagctcgccgggaaggacgag 425
Query: 395 gcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgggcgag 454
||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 424 gcgcaccgacgtctggatctcccgggaggtgatggtgggcttcttgttgtagcgggcgag 365
Query: 455 cttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatgatgga 514
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 cttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttcatgatgga 305
Query: 515 catggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaagatgta 574
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 catggccttggaggagataccaatgtccgggtgcacctgcttgagcaccttgaagatgta 245
Query: 575 gatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcgccgccctc 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcgccgccctc 185
Query: 635 cttgcccggcacgcgcttctccgccctgggcttcttctcggccttctcctccgtcggctt 694
|||||| || ||||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 184 cttgccggggacgcgtttctccgccctgggcttcttctcggccttctcctccgccggctt 125
Query: 695 cttctccgcgggcttcttctcggccttgggcgccatcgggaattcgatcaaatggagcgg 754
||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||
Sbjct: 124 cttctccgcgggcttcttctcggccttgggcgccatcagtaa-tcgatcaaatggagcgg 66
Query: 755 cgaacgcgggatgggaagcggcggattgggaatttg 790
|||||||| | ||||||||||||||||| |||||||
Sbjct: 65 cgaacgcgaggtgggaagcggcggattgcgaatttg 30
>gb|CX607748.1|CX607748 ANR1_30_B07.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_30_B07_A002 5', mRNA sequence
Length = 644
Score = 795 bits (401), Expect = 0.0
Identities = 501/533 (93%), Gaps = 1/533 (0%)
Strand = Plus / Minus
Query: 258 agcactggcctaaaagtacgaggaaacgaaacagagccgtcgctccgtgcggcggcgatc 317
|||||||||||||| ||||||| |||||||| |||| || || ||| ||||| |
Sbjct: 568 agcactggcctaaacacacgaggagacgaaacaagaccgtagcaccatgcagcggcagcc 509
Query: 318 taagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagc 377
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 508 taagaggaagtaaacttggtaacagccttggtgccctcggagacggcgtgcttggcgagc 449
Query: 378 tcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttc 437
||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 448 tcgccgggaaggacgaggcgcaccgacgtctggatctcccgggaggtgatggtgggcttc 389
Query: 438 ttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatg 497
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 388 ttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatg 329
Query: 498 aaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgcttg 557
||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 328 aaggagttcatgatggacatggcctcggaggagataccaatgtccgggtgcacctgcttg 269
Query: 558 agcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttcccc 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 agcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttcccc 209
Query: 618 ttcttctcgccgccctccttgcccggcacgcgcttctccgccctgggcttcttctcggcc 677
||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||
Sbjct: 208 ttcttctcgccgccctccttgccggggacgcgtttctccgccctgggcttcttctcggcc 149
Query: 678 ttctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccatcgggaat 737
|||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 148 ttctcctccgccggcttcttctccgcgggcttcttctcggccttgggcgccatcagtaa- 90
Query: 738 tcgatcaaatggagcggcgaacgcgggatgggaagcggcggattgggaatttg 790
||||||||||||||||||||||||| | ||||||||||||||||| |||||||
Sbjct: 89 tcgatcaaatggagcggcgaacgcgaggtgggaagcggcggattgcgaatttg 37
>gb|CX607662.1|CX607662 ANR1_30_B07.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_30_B07_A002 3', mRNA sequence
Length = 607
Score = 720 bits (363), Expect = 0.0
Identities = 466/499 (93%), Gaps = 1/499 (0%)
Strand = Plus / Minus
Query: 258 agcactggcctaaaagtacgaggaaacgaaacagagccgtcgctccgtgcggcggcgatc 317
|||||||||||||| ||||||| |||||||| |||| || || ||| ||||| |
Sbjct: 498 agcactggcctaaacacacgaggagacgaaacaagaccgtagcaccatgcagcggcagcc 439
Query: 318 taagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagc 377
||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 438 taagaggaagtaaacttggtaacagccttggtgccctcggaaacggcgtgcttggcgagc 379
Query: 378 tcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttc 437
||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 378 tcgccgggaaggacgaggcgcaccgacgtctggatctcccgggaggtgatggtgggcttc 319
Query: 438 ttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatg 497
|||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||
Sbjct: 318 ttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaaaatgtcgttgatg 259
Query: 498 aaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgcttg 557
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 258 aaggagttcatgatggacatggccttggaggaaataccaatgtccgggtgcacctgcttg 199
Query: 558 agcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttcccc 617
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 agcaccttgaaaatgtaaatcttgtacgtctcgacgctcttcttggccttcttcttcccc 139
Query: 618 ttcttctcgccgccctccttgcccggcacgcgcttctccgccctgggcttcttctcggcc 677
||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||
Sbjct: 138 ttcttctcgccgccctccttgccggggacgcgtttctccgccctgggcttcttctcggcc 79
Query: 678 ttctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccatcgggaat 737
|||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 78 ttctcctccgccggcttcttctccgcgggcttcttctcggccttgggcgccatcagtaa- 20
Query: 738 tcgatcaaatggagcggcg 756
|||||||||||||||||||
Sbjct: 19 tcgatcaaatggagcggcg 1
>gb|AI724242.1|AI724242 RHIZ1_8_B12.y2_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 448
Score = 519 bits (262), Expect = e-145
Identities = 328/350 (93%)
Strand = Plus / Minus
Query: 257 tagcactggcctaaaagtacgaggaaacgaaacagagccgtcgctccgtgcggcggcgat 316
||||||||||||||| |||||||||||||||| |||| | |||| | || || |
Sbjct: 355 tagcactggcctaaacacacgaggaaacgaaacatgaccgtagaaccgtacagcagcaac 296
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
|||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 295 ctaagatgaagtaaacttggtaaccgccttggtgccctcagagacggcgtgcttggcgag 236
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 235 ctcgccgggaaggacgaggcgcaccgaggtctggatctcccgggaggtgatggtgggctt 176
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 175 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 116
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 56
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggcct 606
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggcct 6
>gb|CF772707.1|CF772707 DSBF1_38_D05.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_38_D05_A010 3', mRNA sequence
Length = 420
Score = 466 bits (235), Expect = e-129
Identities = 292/311 (93%)
Strand = Plus / Minus
Query: 257 tagcactggcctaaaagtacgaggaaacgaaacagagccgtcgctccgtgcggcggcgat 316
||||||||||||||| |||||||||||||||| |||| || |||||| || || |
Sbjct: 311 tagcactggcctaaacacacgaggaaacgaaacaagaccgtagcaccgtgcagcagcaac 252
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
|||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 251 ctaagaggaagtaaacttggtaacagccttggtgccctcggaaacggcgtgcttggcgag 192
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 191 ctcgccgggaaggacgaggcgcaccgaggtctggatctcccgggaggtgatggtgggctt 132
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 131 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 72
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 12
Query: 557 gagcaccttga 567
|||||||||||
Sbjct: 11 gagcaccttga 1
>gb|CW188377.1|CW188377 104_608_11172997_148_36734_061 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11172997, DNA
sequence
Length = 707
Score = 464 bits (234), Expect = e-129
Identities = 303/326 (92%)
Strand = Plus / Minus
Query: 315 atctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcg 374
|||||||| || || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 558 atctaagatgaggtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcg 499
Query: 375 agctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggc 434
|||||||| || ||||||||||||||||| ||||||||||||| |||||| |||||||||
Sbjct: 498 agctcgccggggaggacgaggcgcaccgacgtctggatctccctggaggtgatggtgggc 439
Query: 435 ttcttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttg 494
|||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 438 ttcttgttgtagcgcgcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttg 379
Query: 495 atgaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgc 554
|||||||||||||||||||||||||||||||| ||||| || ||||| ||||||||||||
Sbjct: 378 atgaaggagttcatgatggacatggccttggaggagatgccgatgtcagggtgcacctgc 319
Query: 555 ttgagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttc 614
||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||
Sbjct: 318 ttgagcaccttgaagatgtagatcttgtaggtctccaccgacttcttggccttcttcttc 259
Query: 615 cccttcttctcgccgccctccttgcc 640
|||||||| |||||||| ||||||||
Sbjct: 258 cccttcttgtcgccgccttccttgcc 233
Score = 54.0 bits (27), Expect = 2e-005
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 690 ggcttcttctccgcgggcttcttctcggccttgggcgccatcg 732
||||||||| |||| ||||||||||| |||||||| |||||||
Sbjct: 144 ggcttcttcgccgccggcttcttctccgccttgggagccatcg 102
Score = 42.1 bits (21), Expect = 0.082
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 647 gcgcttctccgccctgggcttcttc 671
||||||||||||| |||||||||||
Sbjct: 211 gcgcttctccgccttgggcttcttc 187
>gb|CW191309.1|CW191309 104_613_11178426_116_36942_075 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11178426, DNA
sequence
Length = 724
Score = 464 bits (234), Expect = e-129
Identities = 303/326 (92%)
Strand = Plus / Minus
Query: 315 atctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcg 374
|||||||| || || ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 614 atctaagatgaggtgaacttggtaacggccttggtgccctcggacacggcgtgcttggcg 555
Query: 375 agctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggc 434
|||||||| || ||||||||||||||||| ||||||||||||| |||||| |||||||||
Sbjct: 554 agctcgcctgggaggacgaggcgcaccgacgtctggatctccctggaggtgatggtgggc 495
Query: 435 ttcttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttg 494
||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||
Sbjct: 494 ttcttgttgtagcgggcgagcttggcggcctcgccggcgagcttctcgaagatgtcgttg 435
Query: 495 atgaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgc 554
|||||||||||||||||||||||||||||||| ||||| || ||||| ||||||||||||
Sbjct: 434 atgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtgcacctgc 375
Query: 555 ttgagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttc 614
||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||
Sbjct: 374 ttgagcaccttgaagatgtagatcttgtaggtctccaccgacttcttggccttcttcttg 315
Query: 615 cccttcttctcgccgccctccttgcc 640
|||||||| |||||||||||||||||
Sbjct: 314 cccttcttgtcgccgccctccttgcc 289
Score = 65.9 bits (33), Expect = 6e-009
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccatcg 732
|||||||| ||||||||| |||| ||||||||||| ||||||||||||||||
Sbjct: 213 ctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccatcg 161
Score = 42.1 bits (21), Expect = 0.082
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 647 gcgcttctccgccctgggcttcttc 671
||||||||||||| |||||||||||
Sbjct: 267 gcgcttctccgccttgggcttcttc 243
>gb|CW129063.1|CW129063 104_511_11114353_148_34760_015 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11114353, DNA
sequence
Length = 698
Score = 456 bits (230), Expect = e-126
Identities = 302/326 (92%)
Strand = Plus / Minus
Query: 315 atctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcg 374
||||||||||| || |||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 642 atctaagaggaggtgaacttggtgacggccttggtaccctcggagacggcgtgcttggcg 583
Query: 375 agctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggc 434
||||| || || ||||||||||| || || ||||||||||| |||||||| |||||||||
Sbjct: 582 agctccccggggaggacgaggcggacggaggtctggatctcgcgggaggtaatggtgggc 523
Query: 435 ttcttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttg 494
|||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||
Sbjct: 522 ttcttgttgtagcgggcgagcttggcggactccgcggccagcttctcgaagatgtcgttg 463
Query: 495 atgaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgc 554
|||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||
Sbjct: 462 atgaaggagttcatgatggacatggccttggaggagatgccgatgtccgggtgcacctgc 403
Query: 555 ttgagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttc 614
|| || ||||||||||||||||||||||| ||||| |||||||||||| |||||||| ||
Sbjct: 402 ttcaggaccttgaagatgtagatcttgtaggtctccacgctcttcttgcccttcttcctc 343
Query: 615 cccttcttctcgccgccctccttgcc 640
||||||||||||||||||||||||||
Sbjct: 342 cccttcttctcgccgccctccttgcc 317
Score = 58.0 bits (29), Expect = 1e-006
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccatcg 732
|||||||| ||||||||| ||| ||||||||||| ||||||||||||||||
Sbjct: 223 ctcctccgcgggcttcttcgacgccggcttcttctctgccttgggcgccatcg 171
Score = 40.1 bits (20), Expect = 0.32
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 648 cgcttctccgccctgggcttcttc 671
|||||||||||| |||||||||||
Sbjct: 291 cgcttctccgccttgggcttcttc 268
>gb|CW297850.1|CW297850 104_780_11462260_116_35647_012 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11462260, DNA
sequence
Length = 662
Score = 456 bits (230), Expect = e-126
Identities = 302/326 (92%)
Strand = Plus / Minus
Query: 315 atctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcg 374
||||||||||| || |||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 369 atctaagaggaggtgaacttggtgacggccttggtaccctcggagacggcgtgcttggcg 310
Query: 375 agctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggc 434
||||| || || ||||||||||| || || ||||||||||| |||||||| |||||||||
Sbjct: 309 agctccccggggaggacgaggcggacggaggtctggatctcgcgggaggtaatggtgggc 250
Query: 435 ttcttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttg 494
|||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||
Sbjct: 249 ttcttgttgtagcgggcgagcttggcggactccgcggccagcttctcgaagatgtcgttg 190
Query: 495 atgaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgc 554
|||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||
Sbjct: 189 atgaaggagttcatgatggacatggccttggaggagatgccgatgtccgggtgcacctgc 130
Query: 555 ttgagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttc 614
|| || ||||||||||||||||||||||| ||||| |||||||||||| |||||||| ||
Sbjct: 129 ttcaggaccttgaagatgtagatcttgtaggtctccacgctcttcttgcccttcttcctc 70
Query: 615 cccttcttctcgccgccctccttgcc 640
||||||||||||||||||||||||||
Sbjct: 69 cccttcttctcgccgccctccttgcc 44
>gb|AI724175.1|AI724175 RHIZ1_8_A04.y2_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 509
Score = 456 bits (230), Expect = e-126
Identities = 302/326 (92%)
Strand = Plus / Minus
Query: 315 atctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcg 374
|||||||| || || ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 393 atctaagatgaggtgaacttggtaacggccttggtgccctcggacacggcgtgcttggcg 334
Query: 375 agctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggc 434
|||||||| || ||||||||||||||||| ||||||||||||| |||||| |||||||||
Sbjct: 333 agctcgcctgggaggacgaggcgcaccgacgtctggatctccctggaggtgatggtgggc 274
Query: 435 ttcttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttg 494
||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||
Sbjct: 273 ttcttgttgtagcgggcgagcttggcggcctcgccggcgagcttctcgaagatgtcgttg 214
Query: 495 atgaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgc 554
|||||||||||||||||||||||||||||||| ||||| || ||||| ||||||||||||
Sbjct: 213 atgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtgcacctgc 154
Query: 555 ttgagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttc 614
|| |||||||||||||||||||||||||| ||||| || ||||||||||||||||||
Sbjct: 153 ttcagcaccttgaagatgtagatcttgtaggtctccaccgacttcttggccttcttcttg 94
Query: 615 cccttcttctcgccgccctccttgcc 640
|||||||| |||||||||||||||||
Sbjct: 93 cccttcttgtcgccgccctccttgcc 68
Score = 42.1 bits (21), Expect = 0.082
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 647 gcgcttctccgccctgggcttcttc 671
||||||||||||| |||||||||||
Sbjct: 46 gcgcttctccgccttgggcttcttc 22
>gb|BG052252.1|BG052252 RHIZ2_12_B05.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 464
Score = 448 bits (226), Expect = e-124
Identities = 301/326 (92%)
Strand = Plus / Minus
Query: 315 atctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcg 374
||||||||||| || |||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 362 atctaagaggaggtgaacttggtgacggccttggtaccctcggagacggcgtgcttggcg 303
Query: 375 agctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggc 434
||||| || || ||||||||||| || || ||||||||||| |||||||| |||||||||
Sbjct: 302 agctccccggggaggacgaggcggacggaggtctggatctcgcgggaggtaatggtgggc 243
Query: 435 ttcttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttg 494
|||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||
Sbjct: 242 ttcttgttgtagcgggcgagcttggcggactccgcggccagcttctcgaagatgtcgttg 183
Query: 495 atgaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgc 554
|||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||
Sbjct: 182 atgaaggagttcatgatggacatggccttggaggagatgccgatgtccgggtgcacctgc 123
Query: 555 ttgagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttc 614
|| || ||||||||||||||||||||||| ||||| ||||||||||| |||||||| ||
Sbjct: 122 ttcaggaccttgaagatgtagatcttgtaggtctccacgctcttcttccccttcttcctc 63
Query: 615 cccttcttctcgccgccctccttgcc 640
||||||||||||||||||||||||||
Sbjct: 62 cccttcttctcgccgccctccttgcc 37
>gb|BG102543.1|BG102543 RHIZ2_34_D04.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 495
Score = 448 bits (226), Expect = e-124
Identities = 301/326 (92%)
Strand = Plus / Minus
Query: 315 atctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcg 374
||||||||||| || |||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 378 atctaagaggaggtgaacttggtgacggccttggtaccctcggagacggcgtgcttggcg 319
Query: 375 agctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggc 434
||||| || || ||||||||||| || || ||||||||||| |||||||| |||||||||
Sbjct: 318 agctccccggggaggacgaggcggacggaggtctggatctcgcgggaggtaatggtgggc 259
Query: 435 ttcttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttg 494
|||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||
Sbjct: 258 ttcttgttgtagcgggcgagcttggcggactccgcggccagcttctcgaagatgtcgttg 199
Query: 495 atgaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgc 554
|||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||
Sbjct: 198 atgaaggagttcatgatggacatggccttggaggagatgccgatgtccgggtgcacctgc 139
Query: 555 ttgagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttc 614
|| || ||||||||||||||||||||||| ||||| ||||||||||| |||||||| ||
Sbjct: 138 ttcaggaccttgaagatgtagatcttgtaggtctccacgctcttcttccccttcttcctc 79
Query: 615 cccttcttctcgccgccctccttgcc 640
||||||||||||||||||||||||||
Sbjct: 78 cccttcttctcgccgccctccttgcc 53
Score = 40.1 bits (20), Expect = 0.32
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 648 cgcttctccgccctgggcttcttc 671
|||||||||||| |||||||||||
Sbjct: 27 cgcttctccgccttgggcttcttc 4
>gb|CW319235.1|CW319235 104_811_11474377_148_35884_003 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11474377, DNA
sequence
Length = 704
Score = 446 bits (225), Expect = e-123
Identities = 302/327 (92%), Gaps = 3/327 (0%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
|||||| || || |||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 606 ctaagaagaggtgaacttggtgacagccttggtgccctcggagacggcgtgcttggcgag 547
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 546 ctcgccggggaggacgaggcgcaccgaggtctggatctcgcgggaggtgatggtgggctt 487
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
|||||||||||| || |||||||||| |||||| || |||||||||||||||||||||||
Sbjct: 486 cttgttgtagcgcgccagcttggcggactcggccgcaagcttctcgaagatgtcgttgat 427
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 426 gaaggagttcatgatggacatggccttggacgagatgccgatgtccgggtgcacctgctt 367
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccc 616
||||||||||||||||||||||||||| ||||| ||| |||||| ||||||||||||||
Sbjct: 366 gagcaccttgaagatgtagatcttgtaggtctccacggacttcttcgccttcttcttccc 307
Query: 617 cttctt---ctcgccgccctccttgcc 640
|||||| ||||||||||||||||||
Sbjct: 306 cttcttgccctcgccgccctccttgcc 280
Score = 60.0 bits (30), Expect = 3e-007
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccatcgg 733
|||||||| ||||||||| |||| ||||||||||| |||||||| ||||||||
Sbjct: 195 ctcctccgcgggcttcttcgccgccggcttcttctccgccttgggtgccatcgg 142
>gb|CW417908.1|CW417908 fsbb001f121c05f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f121c05, DNA
sequence
Length = 812
Score = 446 bits (225), Expect = e-123
Identities = 302/327 (92%), Gaps = 3/327 (0%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
|||||| || || |||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 556 ctaagaagaggtgaacttggtgacagccttggtgccctcggagacggcgtgcttggcgag 497
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 496 ctcgccggggaggacgaggcgcaccgaggtctggatctcgcgggaggtgatggtgggctt 437
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
|||||||||||| || |||||||||| |||||| || |||||||||||||||||||||||
Sbjct: 436 cttgttgtagcgcgccagcttggcggactcggccgcaagcttctcgaagatgtcgttgat 377
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 376 gaaggagttcatgatggacatggccttggacgagatgccgatgtccgggtgcacctgctt 317
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccc 616
||||||||||||||||||||||||||| ||||| ||| |||||| ||||||||||||||
Sbjct: 316 gagcaccttgaagatgtagatcttgtaggtctccacggacttcttcgccttcttcttccc 257
Query: 617 cttctt---ctcgccgccctccttgcc 640
|||||| ||||||||||||||||||
Sbjct: 256 cttcttgccctcgccgccctccttgcc 230
Score = 60.0 bits (30), Expect = 3e-007
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccatcgg 733
|||||||| ||||||||| |||| ||||||||||| |||||||| ||||||||
Sbjct: 145 ctcctccgcgggcttcttcgccgccggcttcttctccgccttgggtgccatcgg 92
>gb|AW680031.1|AW680031 WS1_34_A02.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 558
Score = 446 bits (225), Expect = e-123
Identities = 302/327 (92%), Gaps = 3/327 (0%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
|||||| || || |||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 428 ctaagaagaggtgaacttggtgacagccttggtgccctcggagacggcgtgcttggcgag 369
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 368 ctcgccggggaggacgaggcgcaccgaggtctggatctcgcgggaggtgatggtgggctt 309
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
|||||||||||| || |||||||||| |||||| || |||||||||||||||||||||||
Sbjct: 308 cttgttgtagcgcgccagcttggcggactcggccgcaagcttctcgaagatgtcgttgat 249
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 248 gaaggagttcatgatggacatggccttggacgagatgccgatgtccgggtgcacctgctt 189
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccc 616
||||||||||||||||||||||||||| ||||| ||| |||||| ||||||||||||||
Sbjct: 188 gagcaccttgaagatgtagatcttgtaggtctccacggacttcttcgccttcttcttccc 129
Query: 617 cttctt---ctcgccgccctccttgcc 640
|||||| ||||||||||||||||||
Sbjct: 128 cttcttgccctcgccgccctccttgcc 102
>gb|BE355360.1|BE355360 DG1_114_A03.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 526
Score = 446 bits (225), Expect = e-123
Identities = 302/327 (92%), Gaps = 3/327 (0%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
|||||| || || |||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 526 ctaagaagaggtgaacttggtgacagccttggtgccctcggagacggcgtgcttggcgag 467
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 466 ctcgccggggaggacgaggcgcaccgaggtctggatctcgcgggaggtgatggtgggctt 407
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
|||||||||||| || |||||||||| |||||| || |||||||||||||||||||||||
Sbjct: 406 cttgttgtagcgcgccagcttggcggactcggccgcaagcttctcgaagatgtcgttgat 347
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 346 gaaggagttcatgatggacatggccttggacgagatgccgatgtccgggtgcacctgctt 287
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccc 616
||||||||||||||||||||||||||| ||||| ||| |||||| ||||||||||||||
Sbjct: 286 gagcaccttgaagatgtagatcttgtaggtctccacggacttcttcgccttcttcttccc 227
Query: 617 cttctt---ctcgccgccctccttgcc 640
|||||| ||||||||||||||||||
Sbjct: 226 cttcttgccctcgccgccctccttgcc 200
Score = 60.0 bits (30), Expect = 3e-007
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccatcgg 733
|||||||| ||||||||| |||| ||||||||||| |||||||| ||||||||
Sbjct: 115 ctcctccgcgggcttcttcgccgccggcttcttctccgccttgggtgccatcgg 62
>gb|BE355526.1|BE355526 DG1_114_A03.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 662
Score = 446 bits (225), Expect = e-123
Identities = 302/327 (92%), Gaps = 3/327 (0%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
|||||| || || |||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 422 ctaagaagaggtgaacttggtgacagccttggtgccctcggagacggcgtgcttggcgag 363
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 362 ctcgccggggaggacgaggcgcaccgaggtctggatctcgcgggaggtgatggtgggctt 303
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
|||||||||||| || |||||||||| |||||| || |||||||||||||||||||||||
Sbjct: 302 cttgttgtagcgcgccagcttggcggactcggccgcaagcttctcgaagatgtcgttgat 243
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 242 gaaggagttcatgatggacatggccttggacgagatgccgatgtccgggtgcacctgctt 183
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccc 616
||||||||||||||||||||||||||| ||||| ||| |||||| ||||||||||||||
Sbjct: 182 gagcaccttgaagatgtagatcttgtaggtctccacggacttcttcgccttcttcttccc 123
Query: 617 cttctt---ctcgccgccctccttgcc 640
|||||| ||||||||||||||||||
Sbjct: 122 cttcttgccctcgccgccctccttgcc 96
>gb|BG410872.1|BG410872 EM1_27_A01.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 537
Score = 446 bits (225), Expect = e-123
Identities = 302/327 (92%), Gaps = 3/327 (0%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
|||||| || || |||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 394 ctaagaagaggtgaacttggtgacagccttggtgccctcggagacggcgtgcttggcgag 335
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 334 ctcgccggggaggacgaggcgcaccgaggtctggatctcgcgggaggtgatggtgggctt 275
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
|||||||||||| || |||||||||| |||||| || |||||||||||||||||||||||
Sbjct: 274 cttgttgtagcgcgccagcttggcggactcggccgcaagcttctcgaagatgtcgttgat 215
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 214 gaaggagttcatgatggacatggccttggacgagatgccgatgtccgggtgcacctgctt 155
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccc 616
||||||||||||||||||||||||||| ||||| ||| |||||| ||||||||||||||
Sbjct: 154 gagcaccttgaagatgtagatcttgtaggtctccacggacttcttcgccttcttcttccc 95
Query: 617 cttctt---ctcgccgccctccttgcc 640
|||||| ||||||||||||||||||
Sbjct: 94 cttcttgccctcgccgccctccttgcc 68
>gb|BE592378.1|BE592378 WS1_94_A05.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 464
Score = 442 bits (223), Expect = e-122
Identities = 292/315 (92%)
Strand = Plus / Minus
Query: 315 atctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcg 374
|||||||| || || ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 315 atctaagatgaggtgaacttggtaacggccttggtgccctcggacacggcgtgcttggcg 256
Query: 375 agctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggc 434
|||||||| || ||||||||||||||||| ||||||||||||| |||||| |||||||||
Sbjct: 255 agctcgcctgggaggacgaggcgcaccgacgtctggatctccctggaggtgatggtgggc 196
Query: 435 ttcttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttg 494
||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||
Sbjct: 195 ttcttgttgtagcgggcgagcttggcggcctcgccggcgagcttctcgaagatgtcgttg 136
Query: 495 atgaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgc 554
|||||||||||||||||||||||||||||||| ||||| || ||||| ||||||||||||
Sbjct: 135 atgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtgcacctgc 76
Query: 555 ttgagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttc 614
||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||
Sbjct: 75 ttgagcaccttgaagatgtagatcttgtaggtctccaccgacttcttggccttcttcttg 16
Query: 615 cccttcttctcgccg 629
|||||||| ||||||
Sbjct: 15 cccttcttgtcgccg 1
>gb|BE917707.1|BE917707 OV1_6_B04.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 554
Score = 440 bits (222), Expect = e-122
Identities = 285/306 (93%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
|||||| || || |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 549 ctaagacgaggtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgag 490
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
||| || || ||||||||||| || |||||||||||||| ||||| || |||||||||||
Sbjct: 489 ctccccggggaggacgaggcggacggaagtctggatctctcgggacgtgatggtgggctt 430
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
|||||||||||||||||||||||||| |||||| || |||||||||||||||||||||||
Sbjct: 429 cttgttgtagcgggcgagcttggcggactcggcggcgagcttctcgaagatgtcgttgat 370
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||
Sbjct: 369 gaaggagttcatgatggacatggccttggaggagatgccgatgtccgggtgcacctgctt 310
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccc 616
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||
Sbjct: 309 gagcaccttgaagatgtagatcttgtaggtctccacgctcttcttggccttcttcttgcc 250
Query: 617 cttctt 622
||||||
Sbjct: 249 cttctt 244
Score = 65.9 bits (33), Expect = 6e-009
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccatcg 732
|||||||| ||||||||| |||| ||||||||||| ||||||||||||||||
Sbjct: 138 ctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccatcg 86
>gb|BF704683.1|BF704683 FM1_50_B08.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 563
Score = 434 bits (219), Expect = e-120
Identities = 288/311 (92%)
Strand = Plus / Minus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
|||||||| ||||||||||| ||||||||||||||||||||||||||||| || || |||
Sbjct: 515 aacttggtgacggccttggttccctcggagacggcgtgcttggcgagctctccggggagg 456
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
||||||||||| || || |||||||| |||||||| |||||||||||||||||||| ||
Sbjct: 455 acgaggcgcacggaggtttggatctcgcgggaggtgatggtgggcttcttgttgtaccgc 396
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
|||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||
Sbjct: 395 gcgagcttggcggcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttcatg 336
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
||||||||||||||||| ||||| || ||||| |||||||||||||| ||||||||||||
Sbjct: 335 atggacatggccttggaggagatgccgatgtcggggtgcacctgcttcagcaccttgaag 276
Query: 570 atgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcgccg 629
|||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 275 atgtagattttgtaggtctccacgctcttcttggccttcttcttccccttcttctcgccg 216
Query: 630 ccctccttgcc 640
|||||||||||
Sbjct: 215 ccctccttgcc 205
Score = 83.8 bits (42), Expect = 2e-014
Identities = 45/46 (97%)
Strand = Plus / Minus
Query: 689 cggcttcttctccgcgggcttcttctcggccttgggcgccatcggg 734
||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 123 cggcttcttctccgctggcttcttctcggccttgggcgccatcggg 78
>gb|CF071535.1|CF071535 FE1_17_C03.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_17_C03_A002 3', mRNA sequence
Length = 466
Score = 432 bits (218), Expect = e-119
Identities = 284/306 (92%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
|||||| || || |||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 340 ctaagaagaggtgaacttggtgacagccttggtgccctcggagacggcgtgcttggcgag 281
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 280 ctcgccggggaggacgaggcgcaccgaggtctggatctcgcgggaggtgatggtgggctt 221
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
|||||||||||| || |||||||||| |||||| || |||||||||||||||||||||||
Sbjct: 220 cttgttgtagcgcgccagcttggcggactcggccgcaagcttctcgaagatgtcgttgat 161
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 160 gaaggagttcatgatggacatggccttggacgagatgccgatgtccgggtgcacctgctt 101
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccc 616
||||||||||||||||||||||||||| ||||| ||| |||||| ||||||||||||||
Sbjct: 100 gagcaccttgaagatgtagatcttgtaggtctccacggacttcttcgccttcttcttccc 41
Query: 617 cttctt 622
||||||
Sbjct: 40 cttctt 35
>gb|BG488106.1|BG488106 RHIZ2_63_D10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 514
Score = 426 bits (215), Expect = e-117
Identities = 296/323 (91%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
|||||| || || |||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 410 ctaagacgaggtgaacttggtgacggccttggtgccctcagagacggcgtgcttggcgag 351
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
||| || || ||||||||||| || || |||||||||||||| || || |||||||||||
Sbjct: 350 ctccccggggaggacgaggcggacggaggtctggatctcccgagaagtgatggtgggctt 291
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||| | || ||||||||||||||||| |||||
Sbjct: 290 cttgttgtagcgggcgagcttggcggcctcgccggcgagcttctcgaagatgtcattgat 231
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 230 gaaggagttcatgatggacatggccttggaggagataccgatgtccgggtgcacctgctt 171
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccc 616
|||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||
Sbjct: 170 cagcaccttgaagatgtagatcttgtacgtctccacgctcttcttgcccttcttccgacc 111
Query: 617 cttcttctcgccgccctccttgc 639
| |||||||||||||||||||||
Sbjct: 110 cctcttctcgccgccctccttgc 88
Score = 40.1 bits (20), Expect = 0.32
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 648 cgcttctccgccctgggcttcttc 671
|||||||||||| |||||||||||
Sbjct: 64 cgcttctccgccttgggcttcttc 41
>gb|BG488416.1|BG488416 RHIZ2_63_D10.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 556
Score = 426 bits (215), Expect = e-117
Identities = 296/323 (91%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
|||||| || || |||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 538 ctaagacgaggtgaacttggtgacggccttggtgccctcagagacggcgtgcttggcgag 479
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
||| || || ||||||||||| || || |||||||||||||| || || |||||||||||
Sbjct: 478 ctccccggggaggacgaggcggacggaggtctggatctcccgagaagtgatggtgggctt 419
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||| | || ||||||||||||||||| |||||
Sbjct: 418 cttgttgtagcgggcgagcttggcggcctcgccggcgagcttctcgaagatgtcattgat 359
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 358 gaaggagttcatgatggacatggccttggaggagataccgatgtccgggtgcacctgctt 299
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccc 616
|||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||
Sbjct: 298 cagcaccttgaagatgtagatcttgtacgtctccacgctcttcttgcccttcttccgacc 239
Query: 617 cttcttctcgccgccctccttgc 639
| |||||||||||||||||||||
Sbjct: 238 cctcttctcgccgccctccttgc 216
Score = 58.0 bits (29), Expect = 1e-006
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 690 ggcttcttctccgcgggcttcttctcggccttgggcgccatcggg 734
||||||||| | || ||||||||||| ||||||||||||||||||
Sbjct: 123 ggcttcttcgctgccggcttcttctccgccttgggcgccatcggg 79
Score = 40.1 bits (20), Expect = 0.32
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 648 cgcttctccgccctgggcttcttc 671
|||||||||||| |||||||||||
Sbjct: 192 cgcttctccgccttgggcttcttc 169
>gb|CW306661.1|CW306661 104_792_11466961_148_35713_007 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11466961, DNA
sequence
Length = 711
Score = 420 bits (212), Expect = e-116
Identities = 272/292 (93%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
|||||| || || |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 292 ctaagacgaggtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgag 233
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
||| || || ||||||||||| || |||||||||||||| ||||| || |||||||||||
Sbjct: 232 ctccccggggaggacgaggcggacggaagtctggatctctcgggacgtgatggtgggctt 173
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
|||||||||||||||||||||||||| |||||| || |||||||||||||||||||||||
Sbjct: 172 cttgttgtagcgggcgagcttggcggactcggcggcgagcttctcgaagatgtcgttgat 113
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||
Sbjct: 112 gaaggagttcatgatggacatggccttggaggagatgccgatgtccgggtgcacctgctt 53
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttc 608
||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 52 gagcaccttgaagatgtagatcttgtaggtctccacgctcttcttggccttc 1
>gb|AW564395.1|AW564395 LG1_292_F12.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 568
Score = 420 bits (212), Expect = e-116
Identities = 284/308 (92%)
Strand = Plus / Minus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
|||||||| ||||||||||| ||||||||||||||||||||||||||||| || || |||
Sbjct: 510 aacttggtgacggccttggttccctcggagacggcgtgcttggcgagctctccggggagg 451
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
||||||||||| || || |||||||| |||||||| |||||||||||||||||||| ||
Sbjct: 450 acgaggcgcacggaggtttggatctcgcgggaggtgatggtgggcttcttgttgtaccgc 391
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
|||||||||||||||||| | || ||||||||||||||||| ||||||||||||||||||
Sbjct: 390 gcgagcttggcggcctcgccggcgagcttctcgaagatgtcattgatgaaggagttcatg 331
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
||||||||||||||||| ||||| || ||||| |||||||||||||| ||||||||||||
Sbjct: 330 atggacatggccttggaggagatgccgatgtcggggtgcacctgcttcagcaccttgaag 271
Query: 570 atgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcgccg 629
|||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 270 atgtagattttgtaggtctccacgctcttcttggccttcttcttccccttcttctcgccg 211
Query: 630 ccctcctt 637
||||||||
Sbjct: 210 ccctcctt 203
Score = 83.8 bits (42), Expect = 2e-014
Identities = 45/46 (97%)
Strand = Plus / Minus
Query: 689 cggcttcttctccgcgggcttcttctcggccttgggcgccatcggg 734
||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 118 cggcttcttctccgctggcttcttctcggccttgggcgccatcggg 73
>gb|BE593143.1|BE593143 WS1_98_A10.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 596
Score = 420 bits (212), Expect = e-116
Identities = 284/308 (92%)
Strand = Plus / Minus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
|||||||| ||||||||||| ||||||||||||||||||||||||||||| || || |||
Sbjct: 456 aacttggtgacggccttggttccctcggagacggcgtgcttggcgagctctccggggagg 397
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
||||||||||| || || |||||||| |||||||| |||||||||||||||||||| ||
Sbjct: 396 acgaggcgcacggaggtttggatctcgcgggaggtgatggtgggcttcttgttgtaccgc 337
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
|||||||||||||||||| | || ||||||||||||||||| ||||||||||||||||||
Sbjct: 336 gcgagcttggcggcctcgccggcgagcttctcgaagatgtcattgatgaaggagttcatg 277
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
||||||||||||||||| ||||| || ||||| |||||||||||||| ||||||||||||
Sbjct: 276 atggacatggccttggaggagatgccgatgtcggggtgcacctgcttcagcaccttgaag 217
Query: 570 atgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcgccg 629
|||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 216 atgtagattttgtaggtctccacgctcttcttggccttcttcttccccttcttctcgccg 157
Query: 630 ccctcctt 637
||||||||
Sbjct: 156 ccctcctt 149
Score = 83.8 bits (42), Expect = 2e-014
Identities = 45/46 (97%)
Strand = Plus / Minus
Query: 689 cggcttcttctccgcgggcttcttctcggccttgggcgccatcggg 734
||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 64 cggcttcttctccgctggcttcttctcggccttgggcgccatcggg 19
>gb|CD431873.1|CD431873 ETH1_11_A02.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_11_A02_A002 5', mRNA sequence
Length = 667
Score = 420 bits (212), Expect = e-116
Identities = 284/308 (92%)
Strand = Plus / Minus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
|||||||| ||||||||||| ||||||||||||||||||||||||||||| || || |||
Sbjct: 534 aacttggtgacggccttggttccctcggagacggcgtgcttggcgagctctccggggagg 475
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
||||||||||| || || |||||||| |||||||| |||||||||||||||||||| ||
Sbjct: 474 acgaggcgcacggaggtttggatctcgcgggaggtgatggtgggcttcttgttgtaccgc 415
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
|||||||||||||||||| | || ||||||||||||||||| ||||||||||||||||||
Sbjct: 414 gcgagcttggcggcctcgccggcgagcttctcgaagatgtcattgatgaaggagttcatg 355
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
||||||||||||||||| ||||| || ||||| |||||||||||||| ||||||||||||
Sbjct: 354 atggacatggccttggaggagatgccgatgtcggggtgcacctgcttcagcaccttgaag 295
Query: 570 atgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcgccg 629
|||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 294 atgtagattttgtaggtctccacgctcttcttggccttcttcttccccttcttctcgccg 235
Query: 630 ccctcctt 637
||||||||
Sbjct: 234 ccctcctt 227
Score = 83.8 bits (42), Expect = 2e-014
Identities = 45/46 (97%)
Strand = Plus / Minus
Query: 689 cggcttcttctccgcgggcttcttctcggccttgggcgccatcggg 734
||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 142 cggcttcttctccgctggcttcttctcggccttgggcgccatcggg 97
>gb|CN150853.1|CN150853 WOUND1_71_G11.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_71_G11_A002 5', mRNA sequence
Length = 765
Score = 420 bits (212), Expect = e-116
Identities = 284/308 (92%)
Strand = Plus / Minus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
|||||||| ||||||||||| ||||||||||||||||||||||||||||| || || |||
Sbjct: 516 aacttggtgacggccttggttccctcggagacggcgtgcttggcgagctctccggggagg 457
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
||||||||||| || || |||||||| |||||||| |||||||||||||||||||| ||
Sbjct: 456 acgaggcgcacggaggtttggatctcgcgggaggtgatggtgggcttcttgttgtaccgc 397
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
|||||||||||||||||| | || ||||||||||||||||| ||||||||||||||||||
Sbjct: 396 gcgagcttggcggcctcgccggcgagcttctcgaagatgtcattgatgaaggagttcatg 337
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
||||||||||||||||| ||||| || ||||| |||||||||||||| ||||||||||||
Sbjct: 336 atggacatggccttggaggagatgccgatgtcggggtgcacctgcttcagcaccttgaag 277
Query: 570 atgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcgccg 629
|||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 276 atgtagattttgtaggtctccacgctcttcttggccttcttcttccccttcttctcgccg 217
Query: 630 ccctcctt 637
||||||||
Sbjct: 216 ccctcctt 209
Score = 83.8 bits (42), Expect = 2e-014
Identities = 45/46 (97%)
Strand = Plus / Minus
Query: 689 cggcttcttctccgcgggcttcttctcggccttgggcgccatcggg 734
||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 124 cggcttcttctccgctggcttcttctcggccttgggcgccatcggg 79
>gb|CW128767.1|CW128767 104_510_11114194_148_34755_039 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11114194, DNA
sequence
Length = 652
Score = 418 bits (211), Expect = e-115
Identities = 295/323 (91%)
Strand = Plus / Plus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
|||||| || || |||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 192 ctaagacgaggtgaacttggtgacggccttggtgccctcagagacggcgtgcttggcgag 251
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
||| || || ||||||||||| || || |||||||||||||| || || |||||||||||
Sbjct: 252 ctccccggggaggacgaggcggacggaggtctggatctcccgagaagtgatggtgggctt 311
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||
Sbjct: 312 cttgttgtagcgggcgagcttggcggcctcgccggcgagcttctcgaagatgtcgttgat 371
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
||| |||||||||||||||||||||||||| ||||| || ||||||||||||||||||||
Sbjct: 372 gaacgagttcatgatggacatggccttggaggagatgccgatgtccgggtgcacctgctt 431
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccc 616
|||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||
Sbjct: 432 cagcaccttgaagatgtagatcttgtacgtctccacgctcttcttgcccttcttccgacc 491
Query: 617 cttcttctcgccgccctccttgc 639
| |||||||||||||||||||||
Sbjct: 492 cctcttctcgccgccctccttgc 514
Score = 44.1 bits (22), Expect = 0.021
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 709 tcttctcggccttgggcgccatcggg 734
||||||| ||||||||||||||||||
Sbjct: 625 tcttctccgccttgggcgccatcggg 650
Score = 40.1 bits (20), Expect = 0.32
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 648 cgcttctccgccctgggcttcttc 671
|||||||||||| |||||||||||
Sbjct: 538 cgcttctccgccttgggcttcttc 561
>gb|BF481909.1|BF481909 FM1_22_H04.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 506
Score = 418 bits (211), Expect = e-115
Identities = 280/303 (92%)
Strand = Plus / Minus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
|||||||| ||||||||||| ||||||||||||||||||||||||||||| || || |||
Sbjct: 303 aacttggtgacggccttggttccctcggagacggcgtgcttggcgagctctccggggagg 244
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
||||||||||| || || |||||||| |||||||| |||||||||||||||||||| ||
Sbjct: 243 acgaggcgcacggaggtttggatctcgcgggaggtgatggtgggcttcttgttgtaccgc 184
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
|||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||
Sbjct: 183 gcgagcttggcggcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttcatg 124
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
||||||||||||||||| ||||| || ||||| |||||||||||||| ||||||||||||
Sbjct: 123 atggacatggccttggaggagatgccgatgtcggggtgcacctgcttcagcaccttgaag 64
Query: 570 atgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcgccg 629
|||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 63 atgtagattttgtaggtctccacgctcttcttggccttcttcttccccttcttctcgccg 4
Query: 630 ccc 632
|||
Sbjct: 3 ccc 1
>gb|BG240440.1|BG240440 OV1_30_A12.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 555
Score = 418 bits (211), Expect = e-115
Identities = 295/323 (91%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
|||||| || || |||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 532 ctaagacgaggtgaacttggtgacggccttggtgccctcagagacggcgtgcttggcgag 473
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
||| || || ||||||||||| || || |||||||||||||| || || |||||||||||
Sbjct: 472 ctccccggggaggacgaggcggacggaggtctggatctcccgagaagtgatggtgggctt 413
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||
Sbjct: 412 cttgttgtagcgggcgagcttggcggcctcgccggcgagcttctcgaagatgtcgttgat 353
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
||| |||||||||||||||||||||||||| ||||| || ||||||||||||||||||||
Sbjct: 352 gaacgagttcatgatggacatggccttggaggagatgccgatgtccgggtgcacctgctt 293
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccc 616
|||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||
Sbjct: 292 cagcaccttgaagatgtagatcttgtacgtctccacgctcttcttgcccttcttccgacc 233
Query: 617 cttcttctcgccgccctccttgc 639
| |||||||||||||||||||||
Sbjct: 232 cctcttctcgccgccctccttgc 210
Score = 58.0 bits (29), Expect = 1e-006
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 690 ggcttcttctccgcgggcttcttctcggccttgggcgccatcggg 734
||||||||| | || ||||||||||| ||||||||||||||||||
Sbjct: 117 ggcttcttcgctgccggcttcttctccgccttgggcgccatcggg 73
Score = 40.1 bits (20), Expect = 0.32
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 648 cgcttctccgccctgggcttcttc 671
|||||||||||| |||||||||||
Sbjct: 186 cgcttctccgccttgggcttcttc 163
>gb|BE917630.1|BE917630 OV1_6_B04.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 493
Score = 416 bits (210), Expect = e-114
Identities = 287/310 (92%), Gaps = 2/310 (0%)
Strand = Plus / Minus
Query: 315 atctaagaggaagtaaacttggtaacggccttggt-gccctcg-gagacggcgtgcttgg 372
|||||||| || || |||||||| ||||||||||| ||||||| ||||||||||||||||
Sbjct: 477 atctaagacgaggtgaacttggtgacggccttggttgccctcgtgagacggcgtgcttgg 418
Query: 373 cgagctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgg 432
||||||| || || ||||||||||| || |||||||||||||| ||||| || |||||||
Sbjct: 417 cgagctccccggggaggacgaggcggacggaagtctggatctctcgggacgtgatggtgg 358
Query: 433 gcttcttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgt 492
|||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||
Sbjct: 357 gcttcttgttgtagcgggcgagcttggcggactcggcggcgagcttctcgaagatgtcgt 298
Query: 493 tgatgaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacct 552
|||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||
Sbjct: 297 tgatgaaggagttcatgatggacatggccttggaggagatgccgatgtccgggtgcacct 238
Query: 553 gcttgagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttct 612
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 237 gcttgagcaccttgaagatgtagatcttgtaggtctccacgctcttcttggccttcttct 178
Query: 613 tccccttctt 622
| ||||||||
Sbjct: 177 tgcccttctt 168
Score = 65.9 bits (33), Expect = 6e-009
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccatcg 732
|||||||| ||||||||| |||| ||||||||||| ||||||||||||||||
Sbjct: 62 ctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccatcg 10
>gb|BG411209.1|BG411209 EM1_27_A01.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 498
Score = 414 bits (209), Expect = e-114
Identities = 271/291 (93%), Gaps = 3/291 (1%)
Strand = Plus / Minus
Query: 353 ctcggagacggcgtgcttggcgagctcgccaggaaggacgaggcgcaccgaagtctggat 412
|||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||
Sbjct: 498 ctcggagacggcgtgcttggcgagctcgccggggaggacgaggcgcaccgaggtctggat 439
Query: 413 ctcccgggaggttatggtgggcttcttgttgtagcgggcgagcttggcggcctcggcagc 472
||| |||||||| ||||||||||||||||||||||| || |||||||||| |||||| ||
Sbjct: 438 ctcgcgggaggtgatggtgggcttcttgttgtagcgcgccagcttggcggactcggccgc 379
Query: 473 cagcttctcgaagatgtcgttgatgaaggagttcatgatggacatggccttggacgagat 532
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 aagcttctcgaagatgtcgttgatgaaggagttcatgatggacatggccttggacgagat 319
Query: 533 accaatgtccgggtgcacctgcttgagcaccttgaagatgtagatcttgtacgtctcgac 592
|| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 318 gccgatgtccgggtgcacctgcttgagcaccttgaagatgtagatcttgtaggtctccac 259
Query: 593 gctcttcttggccttcttcttccccttctt---ctcgccgccctccttgcc 640
| |||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 258 ggacttcttcgccttcttcttccccttcttgccctcgccgccctccttgcc 208
Score = 60.0 bits (30), Expect = 3e-007
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccatcgg 733
|||||||| ||||||||| |||| ||||||||||| |||||||| ||||||||
Sbjct: 123 ctcctccgcgggcttcttcgccgccggcttcttctccgccttgggtgccatcgg 70
>gb|CF071274.1|CF071274 FE1_16_D02.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_16_D02_A002 5', mRNA sequence
Length = 551
Score = 414 bits (209), Expect = e-114
Identities = 287/313 (91%)
Strand = Plus / Plus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
|||||||| ||||||||||||||||||||||||||||||||||||||||| || || |||
Sbjct: 211 aacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcaccggggagg 270
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
|||||||| || || ||||||||||||||||| || |||||||||||||||||||| ||
Sbjct: 271 acgaggcggacggaggtctggatctcccgggacgtgatggtgggcttcttgttgtaccgc 330
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
|| |||||||| ||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttcatg 390
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||
Sbjct: 391 atggacatggccttggacgagatgccgatgtccgggtgcacctgcttcggcaccttgaag 450
Query: 570 atgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcgccg 629
|||||||||||||||||||| || |||||| ||||||||||| |||||||||||||||
Sbjct: 451 atgtagatcttgtacgtctccaccgacttcttcgccttcttctttcccttcttctcgccg 510
Query: 630 ccctccttgcccg 642
|| ||||||||||
Sbjct: 511 ccttccttgcccg 523
>gb|BF656458.1|BF656458 FM1_50_B08.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 556
Score = 412 bits (208), Expect = e-113
Identities = 277/300 (92%)
Strand = Plus / Minus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
|||||||| ||||||||||| ||||||||||||||||||||||||||||| || || |||
Sbjct: 300 aacttggtgacggccttggttccctcggagacggcgtgcttggcgagctctccggggagg 241
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
||||||||||| || || |||||||| |||||||| |||||||||||||||||||| ||
Sbjct: 240 acgaggcgcacggaggtttggatctcgcgggaggtgatggtgggcttcttgttgtaccgc 181
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
|||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||
Sbjct: 180 gcgagcttggcggcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttcatg 121
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
||||||||||||||||| ||||| || ||||| |||||||||||||| ||||||||||||
Sbjct: 120 atggacatggccttggaggagatgccgatgtcggggtgcacctgcttcagcaccttgaag 61
Query: 570 atgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcgccg 629
|||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 60 atgtagattttgtaggtctccacgctcttcttggccttcttcttccccttcttctcgccg 1
>gb|CN125957.1|CN125957 RHOH1_14_H01.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_14_H01_A002 3', mRNA sequence
Length = 781
Score = 412 bits (208), Expect = e-113
Identities = 283/308 (91%)
Strand = Plus / Minus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
|||||||| ||||||||||| ||||||||||||||||||||||||||||| || || |||
Sbjct: 328 aacttggtgacggccttggttccctcggagacggcgtgcttggcgagctctccggggagg 269
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
||||||||||| || || |||||||| |||||||| |||||||||||||||||||| ||
Sbjct: 268 acgaggcgcacggaggtttggatctcgcgggaggtgatggtgggcttcttgttgtaccgc 209
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
|||||||||||||||||| | || ||||||||||||||| | ||||||||||||||||||
Sbjct: 208 gcgagcttggcggcctcgccggcgagcttctcgaagatgccattgatgaaggagttcatg 149
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
||||||||||||||||| ||||| || ||||| |||||||||||||| ||||||||||||
Sbjct: 148 atggacatggccttggaggagatgccgatgtcggggtgcacctgcttcagcaccttgaag 89
Query: 570 atgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcgccg 629
|||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 88 atgtagattttgtaggtctccacgctcttcttggccttcttcttccccttcttctcgccg 29
Query: 630 ccctcctt 637
||||||||
Sbjct: 28 ccctcctt 21
>gb|CN126047.1|CN126047 RHOH1_14_H01.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_14_H01_A002 5', mRNA sequence
Length = 770
Score = 412 bits (208), Expect = e-113
Identities = 283/308 (91%)
Strand = Plus / Minus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
|||||||| ||||||||||| ||||||||||||||||||||||||||||| || || |||
Sbjct: 516 aacttggtgacggccttggttccctcggagacggcgtgcttggcgagctctccggggagg 457
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
||||||||||| || || |||||||| |||||||| |||||||||||||||||||| ||
Sbjct: 456 acgaggcgcacggaggtttggatctcgcgggaggtgatggtgggcttcttgttgtaccgc 397
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
|||||||||||||||||| | || ||||||||||||||| | ||||||||||||||||||
Sbjct: 396 gcgagcttggcggcctcgccggcgagcttctcgaagatgccattgatgaaggagttcatg 337
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
||||||||||||||||| ||||| || ||||| |||||||||||||| ||||||||||||
Sbjct: 336 atggacatggccttggaggagatgccgatgtcggggtgcacctgcttcagcaccttgaag 277
Query: 570 atgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcgccg 629
|||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 276 atgtagattttgtaggtctccacgctcttcttggccttcttcttccccttcttctcgccg 217
Query: 630 ccctcctt 637
||||||||
Sbjct: 216 ccctcctt 209
Score = 83.8 bits (42), Expect = 2e-014
Identities = 45/46 (97%)
Strand = Plus / Minus
Query: 689 cggcttcttctccgcgggcttcttctcggccttgggcgccatcggg 734
||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 124 cggcttcttctccgctggcttcttctcggccttgggcgccatcggg 79
>gb|CX608442.1|CX608442 ANR1_38_D08.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_38_D08_A002 5', mRNA sequence
Length = 635
Score = 412 bits (208), Expect = e-113
Identities = 283/308 (91%)
Strand = Plus / Minus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
|||||||| ||||||||||| ||||||||||||||||||||||||||||| || || |||
Sbjct: 508 aacttggtgacggccttggttccctcggagacggcgtgcttggcgagctctccggggagg 449
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
||||||||||| || || |||||||| |||||||| |||||||||||||||||||| ||
Sbjct: 448 acgaggcgcacggaggtttggatctcgcgggaggtgatggtgggcttcttgttgtaccgc 389
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
|||||||||||||||||| | || ||||||||||||||||| ||||||||||||| ||||
Sbjct: 388 gcgagcttggcggcctcgccggcgagcttctcgaagatgtcattgatgaaggagtccatg 329
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
||||||||||||||||| ||||| || ||||| |||||||||||||| ||||||||||||
Sbjct: 328 atggacatggccttggaggagatgccgatgtcggggtgcacctgcttcagcaccttgaag 269
Query: 570 atgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcgccg 629
|||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 268 atgtagattttgtaggtctccacgctcttcttggccttcttcttccccttcttctcgccg 209
Query: 630 ccctcctt 637
||||||||
Sbjct: 208 ccctcctt 201
Score = 83.8 bits (42), Expect = 2e-014
Identities = 45/46 (97%)
Strand = Plus / Minus
Query: 689 cggcttcttctccgcgggcttcttctcggccttgggcgccatcggg 734
||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 116 cggcttcttctccgctggcttcttctcggccttgggcgccatcggg 71
>gb|AW745446.1|AW745446 WS1_34_A02.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 500
Score = 410 bits (207), Expect = e-113
Identities = 269/289 (93%), Gaps = 3/289 (1%)
Strand = Plus / Minus
Query: 355 cggagacggcgtgcttggcgagctcgccaggaaggacgaggcgcaccgaagtctggatct 414
|||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||
Sbjct: 498 cggagacggcgtgcttggcgagctcgccggggaggacgaggcgcaccgaggtctggatct 439
Query: 415 cccgggaggttatggtgggcttcttgttgtagcgggcgagcttggcggcctcggcagcca 474
| |||||||| ||||||||||||||||||||||| || |||||||||| |||||| || |
Sbjct: 438 cgcgggaggtgatggtgggcttcttgttgtagcgcgccagcttggcggactcggccgcaa 379
Query: 475 gcttctcgaagatgtcgttgatgaaggagttcatgatggacatggccttggacgagatac 534
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 378 gcttctcgaagatgtcgttgatgaaggagttcatgatggacatggccttggacgagatgc 319
Query: 535 caatgtccgggtgcacctgcttgagcaccttgaagatgtagatcttgtacgtctcgacgc 594
| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 318 cgatgtccgggtgcacctgcttgagcaccttgaagatgtagatcttgtaggtctccacgg 259
Query: 595 tcttcttggccttcttcttccccttctt---ctcgccgccctccttgcc 640
|||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 258 acttcttcgccttcttcttccccttcttgccctcgccgccctccttgcc 210
Score = 60.0 bits (30), Expect = 3e-007
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccatcgg 733
|||||||| ||||||||| |||| ||||||||||| |||||||| ||||||||
Sbjct: 125 ctcctccgcgggcttcttcgccgccggcttcttctccgccttgggtgccatcgg 72
>gb|CF074009.1|CF074009 FE1_9_D12.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_9_D12_A002 5', mRNA sequence
Length = 269
Score = 410 bits (207), Expect = e-113
Identities = 243/255 (95%)
Strand = Plus / Plus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 15 ctaagaggaagtaaacttggtaacagccttggtgccctcggagaccgcgtgcttggcgag 74
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| |||||||||||||||||||| ||||||||||||||||| || |||||||||||
Sbjct: 75 ctcgccgggaaggacgaggcgcaccgacgtctggatctcccgggaagtgatggtgggctt 134
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||| ||||||| |||||||||||||| || |||||||||||||||||||||||
Sbjct: 135 cttgttgtaacgggcgaacttggcggcctcgggggcgagcttctcgaagatgtcgttgat 194
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 195 gaaggagttcatgatggacatggccttggaggagataccaatgtccgggtgcacctgctt 254
Query: 557 gagcaccttgaagat 571
|||||||||||||||
Sbjct: 255 gagcaccttgaagat 269
>gb|CF072752.1|CF072752 FE1_25_E07.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_25_E07_A002 5', mRNA sequence
Length = 590
Score = 406 bits (205), Expect = e-111
Identities = 286/313 (91%)
Strand = Plus / Plus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
|||||||| ||||||||||||||||||||||||||||||||||||||||| || || |||
Sbjct: 266 aacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcaccggggagg 325
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
|||||||| || || ||||||||||||||||| || |||||||||||||||||||| ||
Sbjct: 326 acgaggcggacggaggtctggatctcccgggacgtgatggtgggcttcttgttgtaccgc 385
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
|| |||||||| ||||| || |||||||||||||| ||||||||||||||||||||||||
Sbjct: 386 gccagcttggccgcctccgccgccagcttctcgaaaatgtcgttgatgaaggagttcatg 445
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||
Sbjct: 446 atggacatggccttggacgagatgccgatgtccgggtgcacctgcttcagcaccttgaag 505
Query: 570 atgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcgccg 629
|||||||||| ||||||||| || |||||| ||||||||||| |||||||||||||||
Sbjct: 506 atgtagatctcgtacgtctccaccgacttcttcgccttcttctttcccttcttctcgccg 565
Query: 630 ccctccttgcccg 642
|| ||||||||||
Sbjct: 566 ccttccttgcccg 578
>gb|CW088567.1|CW088567 104_433_10948227_116_32575_006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10948227, DNA
sequence
Length = 733
Score = 404 bits (204), Expect = e-111
Identities = 277/300 (92%), Gaps = 1/300 (0%)
Strand = Plus / Plus
Query: 258 agcactggcctaaaagtacgaggaaacgaaacagagccgtcgctccgtgcggcggcgatc 317
|||||||||||||| |||||||||||||||| |||| || || ||| ||||| |
Sbjct: 435 agcactggcctaaacacacgaggaaacgaaacaagaccgtagcaccatgcagcggcagcc 494
Query: 318 taagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagc 377
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 495 taagaggaagtaaacttggtaacagccttggtgccctcggagacggcgtgcttggcgagc 554
Query: 378 tcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttc 437
||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 555 tcgccgggaaggacgaggcgcaccgacgtctggatctcccgggaggtgatggtgggcttc 614
Query: 438 ttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatg 497
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 615 ttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatg 674
Query: 498 aaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgcttg 557
|||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||
Sbjct: 675 aaggagttcatgatggacatggcctttggagagatacc-atgtccgggtgcacctgcttg 733
>gb|CW317075.1|CW317075 104_808_11473223_116_35851_084 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11473223, DNA
sequence
Length = 600
Score = 398 bits (201), Expect = e-109
Identities = 255/273 (93%)
Strand = Plus / Plus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
|||||| || || |||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 316 ctaagaagaggtgaacttggtgacagccttggtgccctcggagacggcgtgcttggcgag 375
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 376 ctcgccggggaggacgaggcgcaccgaggtctggatctcgcgggaggtgatggtgggctt 435
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
|||||||||||| || |||||||||| |||||| || |||||||||||||||||||||||
Sbjct: 436 cttgttgtagcgcgccagcttggcggactcggccgcaagcttctcgaagatgtcgttgat 495
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 496 gaaggagttcatgatggacatggccttggacgagatgccgatgtccgggtgcacctgctt 555
Query: 557 gagcaccttgaagatgtagatcttgtacgtctc 589
||||||||||||||||||||||||||| |||||
Sbjct: 556 gagcaccttgaagatgtagatcttgtaggtctc 588
>gb|BZ341857.1|BZ341857 ic79b05.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ic79b05 5', DNA sequence
Length = 685
Score = 392 bits (198), Expect = e-107
Identities = 261/282 (92%)
Strand = Plus / Plus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
|||||||| ||||||||||||||||| |||||||||||||| |||||||| || || |||
Sbjct: 94 aacttggtgacggccttggtgccctcagagacggcgtgcttcgcgagctccccggggagg 153
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
|||||||| || || ||||||||||| |||||||| |||||||||||||||||||| ||
Sbjct: 154 acgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtaccgc 213
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 214 gcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttcatg 273
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
||||||||||||||||| ||||| || |||||||||||||||||||| ||||||||||||
Sbjct: 274 atggacatggccttggaggagatgccgatgtccgggtgcacctgcttcagcaccttgaag 333
Query: 570 atgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
|||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 334 atgtagatcttgtacgtctccacgctcttcttgcccttcttc 375
Score = 73.8 bits (37), Expect = 2e-011
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccatcg 732
|||||||| | |||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 486 ctcctccgccagcttcttcgccgcgggtttcttctcggccttgggcgccatcg 538
>gb|CL152064.1|CL152064 104_335_10779694_116_31364_094 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10779694, DNA
sequence
Length = 690
Score = 392 bits (198), Expect = e-107
Identities = 261/282 (92%)
Strand = Plus / Plus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
|||||||| ||||||||||||||||| |||||||||||||| |||||||| || || |||
Sbjct: 280 aacttggtgacggccttggtgccctcagagacggcgtgcttcgcgagctccccggggagg 339
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
|||||||| || || ||||||||||| |||||||| |||||||||||||||||||| ||
Sbjct: 340 acgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtaccgc 399
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 400 gcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttcatg 459
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
||||||||||||||||| ||||| || |||||||||||||||||||| ||||||||||||
Sbjct: 460 atggacatggccttggaggagatgccgatgtccgggtgcacctgcttcagcaccttgaag 519
Query: 570 atgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
|||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 520 atgtagatcttgtacgtctccacgctcttcttgcccttcttc 561
>gb|CW155043.1|CW155043 104_557_11145924_116_36362_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11145924, DNA
sequence
Length = 743
Score = 392 bits (198), Expect = e-107
Identities = 261/282 (92%)
Strand = Plus / Minus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
|||||||| ||||||||||||||||| |||||||||||||| |||||||| || || |||
Sbjct: 539 aacttggtgacggccttggtgccctcagagacggcgtgcttcgcgagctccccggggagg 480
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
|||||||| || || ||||||||||| |||||||| |||||||||||||||||||| ||
Sbjct: 479 acgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtaccgc 420
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 419 gcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttcatg 360
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
||||||||||||||||| ||||| || |||||||||||||||||||| ||||||||||||
Sbjct: 359 atggacatggccttggaggagatgccgatgtccgggtgcacctgcttcagcaccttgaag 300
Query: 570 atgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
|||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 299 atgtagatcttgtacgtctccacgctcttcttgcccttcttc 258
Score = 73.8 bits (37), Expect = 2e-011
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccatcg 732
|||||||| | |||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 147 ctcctccgccagcttcttcgccgcgggtttcttctcggccttgggcgccatcg 95
>gb|CW155044.1|CW155044 104_557_11145924_148_36361_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11145924, DNA
sequence
Length = 679
Score = 392 bits (198), Expect = e-107
Identities = 261/282 (92%)
Strand = Plus / Plus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
|||||||| ||||||||||||||||| |||||||||||||| |||||||| || || |||
Sbjct: 345 aacttggtgacggccttggtgccctcagagacggcgtgcttcgcgagctccccggggagg 404
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
|||||||| || || ||||||||||| |||||||| |||||||||||||||||||| ||
Sbjct: 405 acgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtaccgc 464
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 465 gcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttcatg 524
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
||||||||||||||||| ||||| || |||||||||||||||||||| ||||||||||||
Sbjct: 525 atggacatggccttggaggagatgccgatgtccgggtgcacctgcttcagcaccttgaag 584
Query: 570 atgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
|||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 585 atgtagatcttgtacgtctccacgctcttcttgcccttcttc 626
>gb|BF480763.1|BF480763 FM1_14_F11.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 592
Score = 392 bits (198), Expect = e-107
Identities = 261/282 (92%)
Strand = Plus / Minus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
|||||||| ||||||||||||||||| |||||||||||||| |||||||| || || |||
Sbjct: 419 aacttggtgacggccttggtgccctcagagacggcgtgcttcgcgagctccccggggagg 360
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
|||||||| || || ||||||||||| |||||||| |||||||||||||||||||| ||
Sbjct: 359 acgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtaccgc 300
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 299 gcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttcatg 240
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
||||||||||||||||| ||||| || |||||||||||||||||||| ||||||||||||
Sbjct: 239 atggacatggccttggaggagatgccgatgtccgggtgcacctgcttcagcaccttgaag 180
Query: 570 atgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
|||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 179 atgtagatcttgtacgtctccacgctcttcttgcccttcttc 138
Score = 44.1 bits (22), Expect = 0.021
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 648 cgcttctccgccctgggcttcttctcggcc 677
|||||||||||| ||||||||||| |||||
Sbjct: 80 cgcttctccgccttgggcttcttcccggcc 51
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 271,192
Number of Sequences: 832831
Number of extensions: 271192
Number of successful extensions: 80074
Number of sequences better than 0.5: 149
Number of HSP's better than 0.5 without gapping: 149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79400
Number of HSP's gapped (non-prelim): 582
length of query: 842
length of database: 491,359,669
effective HSP length: 20
effective length of query: 822
effective length of database: 474,703,049
effective search space: 390205906278
effective search space used: 390205906278
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)