BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.29
(685 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW319235.1|CW319235 104_811_11474377_148_35884_003 Sorgh... 755 0.0
gb|CW417908.1|CW417908 fsbb001f121c05f0 Sorghum methylation... 755 0.0
gb|BE355360.1|BE355360 DG1_114_A03.b1_A002 Dark Grown 1 (DG... 753 0.0
gb|BG411209.1|BG411209 EM1_27_A01.b1_A002 Embryo 1 (EM1) So... 722 0.0
gb|AW745446.1|AW745446 WS1_34_A02.b1_A002 Water-stressed 1 ... 718 0.0
gb|AW680031.1|AW680031 WS1_34_A02.g1_A002 Water-stressed 1 ... 694 0.0
gb|BE355526.1|BE355526 DG1_114_A03.g1_A002 Dark Grown 1 (DG... 682 0.0
gb|BE355445.1|BE355445 DG1_114_A03.b2_A002 Dark Grown 1 (DG... 646 0.0
gb|BG410872.1|BG410872 EM1_27_A01.g1_A002 Embryo 1 (EM1) So... 636 0.0
gb|BE917707.1|BE917707 OV1_6_B04.b1_A002 Ovary 1 (OV1) Sorg... 611 e-173
gb|BE917630.1|BE917630 OV1_6_B04.g1_A002 Ovary 1 (OV1) Sorg... 583 e-165
gb|CW188377.1|CW188377 104_608_11172997_148_36734_061 Sorgh... 577 e-163
gb|CW191309.1|CW191309 104_613_11178426_116_36942_075 Sorgh... 575 e-162
gb|CF071535.1|CF071535 FE1_17_C03.b1_A002 Iron-deficient se... 555 e-156
gb|CW183462.1|CW183462 104_599_11164629_148_36672_089 Sorgh... 551 e-155
gb|CD464058.1|CD464058 ETH1_48_H05.b1_A002 Ethylene-treated... 551 e-155
gb|CW156116.1|CW156116 104_558_11146509_148_36368_081 Sorgh... 545 e-153
gb|AI724175.1|AI724175 RHIZ1_8_A04.y2_A001 Rhizome1 (RHIZ1)... 541 e-152
gb|CW317075.1|CW317075 104_808_11473223_116_35851_084 Sorgh... 504 e-141
gb|BE599532.1|BE599532 PI1_88_F07.b1_A002 Pathogen induced ... 496 e-138
gb|CW463246.1|CW463246 fsbb001f211m02f0 Sorghum methylation... 492 e-137
gb|BF704683.1|BF704683 FM1_50_B08.b1_A003 Floral-Induced Me... 486 e-135
gb|BG488416.1|BG488416 RHIZ2_63_D10.b1_A003 Rhizome2 (RHIZ2... 478 e-133
gb|CW129063.1|CW129063 104_511_11114353_148_34760_015 Sorgh... 476 e-132
gb|CD213713.1|CD213713 HS1_52_G12.g1_A012 Heat-shocked seed... 472 e-131
gb|AW564395.1|AW564395 LG1_292_F12.b1_A002 Light Grown 1 (L... 470 e-131
gb|BE593143.1|BE593143 WS1_98_A10.g1_A002 Water-stressed 1 ... 470 e-131
gb|BG102543.1|BG102543 RHIZ2_34_D04.g1_A003 Rhizome2 (RHIZ2... 470 e-131
gb|BG240440.1|BG240440 OV1_30_A12.b1_A002 Ovary 1 (OV1) Sor... 470 e-131
gb|CD431873.1|CD431873 ETH1_11_A02.g1_A002 Ethylene-treated... 470 e-131
gb|CN150853.1|CN150853 WOUND1_71_G11.g1_A002 Wounded leaves... 470 e-131
gb|CN126047.1|CN126047 RHOH1_14_H01.g1_A002 Acid- and alkal... 462 e-128
gb|CX608442.1|CX608442 ANR1_38_D08.g1_A002 Anaerobic roots ... 462 e-128
gb|BE592378.1|BE592378 WS1_94_A05.g1_A002 Water-stressed 1 ... 458 e-127
gb|BF480763.1|BF480763 FM1_14_F11.g1_A003 Floral-Induced Me... 454 e-126
gb|BZ341857.1|BZ341857 ic79b05.g1 WGS-SbicolorF (JM107 adap... 448 e-124
gb|CW155043.1|CW155043 104_557_11145924_116_36362_042 Sorgh... 448 e-124
gb|BE593453.1|BE593453 WS1_98_A10.b1_A002 Water-stressed 1 ... 448 e-124
gb|CX606979.1|CX606979 ANR1_6_B05.b1_A002 Anaerobic roots S... 448 e-124
gb|CX607063.1|CX607063 ANR1_6_B05.g1_A002 Anaerobic roots S... 448 e-124
gb|CX610420.1|CX610420 ANR1_18_D02.g1_A002 Anaerobic roots ... 448 e-124
gb|BF481909.1|BF481909 FM1_22_H04.g1_A003 Floral-Induced Me... 446 e-123
gb|BF656458.1|BF656458 FM1_50_B08.g1_A003 Floral-Induced Me... 446 e-123
gb|CW297850.1|CW297850 104_780_11462260_116_35647_012 Sorgh... 444 e-123
gb|CW128767.1|CW128767 104_510_11114194_148_34755_039 Sorgh... 442 e-122
gb|BG052252.1|BG052252 RHIZ2_12_B05.g1_A003 Rhizome2 (RHIZ2... 442 e-122
gb|BG488106.1|BG488106 RHIZ2_63_D10.g1_A003 Rhizome2 (RHIZ2... 442 e-122
gb|CF071274.1|CF071274 FE1_16_D02.g1_A002 Iron-deficient se... 442 e-122
gb|CW410848.1|CW410848 fsbb001f105m09k0 Sorghum methylation... 440 e-122
gb|CD213618.1|CD213618 HS1_52_G12.b1_A012 Heat-shocked seed... 440 e-122
gb|CL152064.1|CL152064 104_335_10779694_116_31364_094 Sorgh... 438 e-121
gb|CW361905.1|CW361905 fsbb001f030l13f0 Sorghum methylation... 438 e-121
gb|BF480894.1|BF480894 FM1_14_F11.b1_A003 Floral-Induced Me... 438 e-121
gb|CN125957.1|CN125957 RHOH1_14_H01.b1_A002 Acid- and alkal... 438 e-121
gb|CW306661.1|CW306661 104_792_11466961_148_35713_007 Sorgh... 436 e-120
gb|BE599367.1|BE599367 PI1_88_F07.g1_A002 Pathogen induced ... 436 e-120
gb|CF072752.1|CF072752 FE1_25_E07.g1_A002 Iron-deficient se... 432 e-119
gb|BE357369.1|BE357369 DG1_148_A05.g1_A002 Dark Grown 1 (DG... 428 e-118
gb|CD432572.1|CD432572 ETH1_30_E04.g1_A002 Ethylene-treated... 428 e-118
gb|CW155044.1|CW155044 104_557_11145924_148_36361_042 Sorgh... 426 e-117
gb|CD462726.1|CD462726 ETH1_39_B03.g1_A002 Ethylene-treated... 424 e-117
gb|CW112587.1|CW112587 104_486_11104970_116_34548_007 Sorgh... 422 e-116
gb|CW182557.1|CW182557 104_598_11164141_116_36663_061 Sorgh... 422 e-116
gb|CX607748.1|CX607748 ANR1_30_B07.g1_A002 Anaerobic roots ... 420 e-116
gb|CW410847.1|CW410847 fsbb001f105m09f0 Sorghum methylation... 412 e-113
gb|BG049237.1|BG049237 OV1_17_D01.g1_A002 Ovary 1 (OV1) Sor... 412 e-113
gb|CF431776.1|CF431776 NIT1_9_B03.b1_A002 Nitrogen-deficien... 410 e-113
gb|AI724242.1|AI724242 RHIZ1_8_B12.y2_A001 Rhizome1 (RHIZ1)... 402 e-110
gb|BE592516.1|BE592516 WS1_94_A05.b1_A002 Water-stressed 1 ... 396 e-108
gb|AI723845.1|AI723845 RHIZ1_28_B06.y1_A001 Rhizome1 (RHIZ1... 392 e-107
gb|BF482021.1|BF482021 FM1_22_H04.b1_A003 Floral-Induced Me... 391 e-107
gb|AW677105.1|AW677105 DG1_4_H07.b1_A002 Dark Grown 1 (DG1)... 389 e-106
gb|CX607662.1|CX607662 ANR1_30_B07.b1_A002 Anaerobic roots ... 389 e-106
gb|BG049096.1|BG049096 OV1_23_C04.g1_A002 Ovary 1 (OV1) Sor... 383 e-104
gb|CW070741.1|CW070741 104_322_10590964_114_30544 Sorghum m... 379 e-103
gb|BG048803.1|BG048803 OV1_23_C04.b1_A002 Ovary 1 (OV1) Sor... 373 e-101
gb|CF484983.1|CF484983 POL1_28_F02.g1_A002 Pollen Sorghum b... 373 e-101
gb|CW490111.1|CW490111 fsbb001f275g08k0 Sorghum methylation... 367 e-100
gb|CF772707.1|CF772707 DSBF1_38_D05.g1_A010 Drought-stresse... 365 4e-099
gb|AW286565.1|AW286565 LG1_334_E01.g1_A002 Light Grown 1 (L... 347 8e-094
gb|CF431835.1|CF431835 NIT1_9_B03.g1_A002 Nitrogen-deficien... 337 8e-091
gb|CF074009.1|CF074009 FE1_9_D12.g1_A002 Iron-deficient see... 325 3e-087
gb|CW088567.1|CW088567 104_433_10948227_116_32575_006 Sorgh... 319 2e-085
gb|CW227263.1|CW227263 104_665_11205321_148_37224_037 Sorgh... 315 3e-084
gb|CW191310.1|CW191310 104_613_11178426_148_36941_075 Sorgh... 313 1e-083
gb|CN150769.1|CN150769 WOUND1_71_G11.b1_A002 Wounded leaves... 311 5e-083
gb|CW306660.1|CW306660 104_792_11466961_116_35709_007 Sorgh... 305 3e-081
gb|AI724884.1|AI724884 RHIZ1_30_G03.y3_A001 Rhizome1 (RHIZ1... 303 1e-080
gb|CD431850.1|CD431850 ETH1_11_D10.g1_A002 Ethylene-treated... 295 3e-078
gb|BG240054.1|BG240054 OV1_17_D01.b1_A002 Ovary 1 (OV1) Sor... 289 2e-076
gb|BG558204.1|BG558204 RHIZ2_64_D04.b1_A003 Rhizome2 (RHIZ2... 289 2e-076
gb|CW182558.1|CW182558 104_598_11164141_148_36664_061 Sorgh... 287 7e-076
gb|CW344083.1|CW344083 104_846_11487770_116_36196_005 Sorgh... 285 3e-075
gb|BF704815.1|BF704815 FM1_51_H04.b1_A003 Floral-Induced Me... 285 3e-075
gb|BG052312.1|BG052312 RHIZ2_12_B05.b1_A003 Rhizome2 (RHIZ2... 283 1e-074
gb|BG102866.1|BG102866 RHIZ2_34_D04.b1_A003 Rhizome2 (RHIZ2... 283 1e-074
gb|CL159717.1|CL159717 104_349_10804465_114_31381_289 Sorgh... 248 6e-064
gb|CW105327.1|CW105327 104_474_11012845_116_34450_053 Sorgh... 248 6e-064
gb|CW105328.1|CW105328 104_474_11012845_148_34446_053 Sorgh... 248 6e-064
gb|CW394994.1|CW394994 fsbb001f082n15f0 Sorghum methylation... 248 6e-064
gb|CW432220.1|CW432220 fsbb001f146m24f0 Sorghum methylation... 248 6e-064
gb|CW104944.1|CW104944 104_474_11012677_148_34448_061 Sorgh... 222 3e-056
gb|BF656582.1|BF656582 FM1_51_H04.g1_A003 Floral-Induced Me... 212 3e-053
gb|CW415400.1|CW415400 fsbb001f115h21f0 Sorghum methylation... 208 5e-052
gb|CW088569.1|CW088569 104_433_10948227_251_32621_006 Sorgh... 204 8e-051
gb|BG560769.1|BG560769 RHIZ2_64_D04.g1_A003 Rhizome2 (RHIZ2... 192 3e-047
gb|CF430869.1|CF430869 NIT1_1_E01.b1_A002 Nitrogen-deficien... 192 3e-047
gb|CW070742.1|CW070742 104_322_10590964_116_30543 Sorghum m... 186 2e-045
gb|CW394995.1|CW394995 fsbb001f082n15k0 Sorghum methylation... 186 2e-045
gb|AI723852.1|AI723852 RHIZ1_28_C06.y1_A001 Rhizome1 (RHIZ1... 178 4e-043
gb|BE353104.1|BE353104 DG1_4_H07.g1_A002 Dark Grown 1 (DG1)... 172 3e-041
gb|CW113300.1|CW113300 104_487_11105369_148_34551_071 Sorgh... 159 4e-037
gb|AI724525.1|AI724525 RHIZ1_37_E01.y1_A001 Rhizome1 (RHIZ1... 151 1e-034
gb|CW238284.1|CW238284 104_695_11216646_148_37417_029 Sorgh... 149 4e-034
gb|CW415401.1|CW415401 fsbb001f115h21k0 Sorghum methylation... 143 2e-032
gb|CW104943.1|CW104943 104_474_11012677_116_34452_061 Sorgh... 141 1e-031
gb|CW424980.1|CW424980 fsbb001f135j06f0 Sorghum methylation... 139 4e-031
gb|CW317076.1|CW317076 104_808_11473223_148_35855_084 Sorgh... 109 3e-022
gb|CW049116.1|CW049116 104_288_10513836_114_30200 Sorghum m... 84 2e-014
gb|CF434162.1|CF434162 NIT1_32_H03.g1_A002 Nitrogen-deficie... 80 3e-013
gb|CW105329.1|CW105329 104_474_11012845_148_34479_053 Sorgh... 76 5e-012
gb|CW424981.1|CW424981 fsbb001f135j06k0 Sorghum methylation... 76 5e-012
gb|CF483259.1|CF483259 POL1_21_A09.b1_A002 Pollen Sorghum b... 70 3e-010
gb|CL152063.1|CL152063 104_335_10779694_114_31363_094 Sorgh... 58 1e-006
gb|CL179294.1|CL179294 104_388_10895213_148_31909_125 Sorgh... 52 7e-005
gb|CW144497.1|CW144497 104_536_11137974_148_34961_019 Sorgh... 46 0.004
gb|CW417909.1|CW417909 fsbb001f121c05k0 Sorghum methylation... 46 0.004
gb|BF587638.1|BF587638 FM1_38_H07.g1_A003 Floral-Induced Me... 46 0.004
gb|BG049287.1|BG049287 OV1_18_A08.g1_A002 Ovary 1 (OV1) Sor... 46 0.004
gb|BG049447.1|BG049447 OV1_20_A12.g1_A002 Ovary 1 (OV1) Sor... 46 0.004
gb|BG049718.1|BG049718 EM1_8_C07.g1_A002 Embryo 1 (EM1) Sor... 46 0.004
gb|BG051307.1|BG051307 FM1_54_G08.g1_A003 Floral-Induced Me... 46 0.004
gb|BG053444.1|BG053444 RHIZ2_8_H11.g1_A003 Rhizome2 (RHIZ2)... 46 0.004
gb|BG463388.1|BG463388 EM1_48_H06.g1_A002 Embryo 1 (EM1) So... 46 0.004
gb|BG464835.1|BG464835 EM1_34_H11.g1_A002 Embryo 1 (EM1) So... 46 0.004
gb|CD221355.1|CD221355 CCC1_54_H11.b1_A007 Callus culture/c... 46 0.004
gb|CD222812.1|CD222812 CCC1_24_A01.b1_A007 Callus culture/c... 46 0.004
gb|CD226336.1|CD226336 CCC1_45_H07.b1_A007 Callus culture/c... 46 0.004
gb|CD431508.1|CD431508 ETH1_9_A05.b1_A002 Ethylene-treated ... 46 0.004
gb|CD431556.1|CD431556 ETH1_9_A05.g1_A002 Ethylene-treated ... 46 0.004
gb|CF429915.1|CF429915 PH1_25_G06.b1_A002 Phosphorous-defic... 46 0.004
gb|CN125610.1|CN125610 RHOH1_12_D09.b1_A002 Acid- and alkal... 46 0.004
gb|CN125688.1|CN125688 RHOH1_12_D09.g1_A002 Acid- and alkal... 46 0.004
gb|CN136152.1|CN136152 OX1_41_C10.b1_A002 Oxidatively-stres... 46 0.004
gb|CN138325.1|CN138325 OX1_63_D02.b1_A002 Oxidatively-stres... 46 0.004
gb|CN138409.1|CN138409 OX1_63_D02.g1_A002 Oxidatively-stres... 46 0.004
gb|CN149002.1|CN149002 WOUND1_60_D08.b1_A002 Wounded leaves... 46 0.004
gb|CN149085.1|CN149085 WOUND1_60_D08.g1_A002 Wounded leaves... 46 0.004
gb|CX607832.1|CX607832 ANR1_31_B09.b1_A002 Anaerobic roots ... 46 0.004
gb|CW314974.1|CW314974 104_805_11472113_116_35877_065 Sorgh... 44 0.017
gb|BE358843.1|BE358843 DG1_32_D03.g1_A002 Dark Grown 1 (DG1... 44 0.017
gb|CD212479.1|CD212479 HS1_5_C01.g1_A012 Heat-shocked seedl... 44 0.017
gb|CN130272.1|CN130272 RHOH1_40_H12.b1_A002 Acid- and alkal... 44 0.017
gb|CN133945.1|CN133945 OX1_19_F11.b1_A002 Oxidatively-stres... 44 0.017
gb|CN134030.1|CN134030 OX1_19_F11.g1_A002 Oxidatively-stres... 44 0.017
gb|CL170389.1|CL170389 104_371_10813777_116_31791_097 Sorgh... 42 0.066
gb|CL186013.1|CL186013 104_400_10899928_116_32405_056 Sorgh... 42 0.066
gb|CW233439.1|CW233439 104_686_11213422_116_37376_085 Sorgh... 42 0.066
gb|CW252274.1|CW252274 104_715_11224407_116_35096_060 Sorgh... 42 0.066
gb|CW278768.1|CW278768 104_753_11406722_116_35426_009 Sorgh... 42 0.066
gb|AW282719.1|AW282719 LG1_292_F12.g1_A002 Light Grown 1 (L... 42 0.066
>gb|CW319235.1|CW319235 104_811_11474377_148_35884_003 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11474377, DNA
sequence
Length = 704
Score = 755 bits (381), Expect = 0.0
Identities = 443/464 (95%), Gaps = 6/464 (1%)
Strand = Plus / Plus
Query: 75 gatggcacccaaggcggagaagaagccggcggccaagaagcccgcggaggaggagcccgc 134
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 144 gatggcacccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgc 203
Query: 135 gacagagaaggtggagaaggctccggcggggaagaagcccaaggccgagaagcgcctccc 194
||| ||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 204 gaccgagaaggcggagaaggccccggcggggaagaagcccaaggccgagaagcggctccc 263
Query: 195 ggcgggcaagtcc------aaggagggcggcgagggcaagaaggggaaaaagaaggcgaa 248
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 264 cgcgggcaagtccgccggcaaggagggcggcgagggcaagaaggggaagaagaaggcgaa 323
Query: 249 gaagtccgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccccga 308
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 324 gaagtccgtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcacccgga 383
Query: 309 catcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcga 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 catcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcga 443
Query: 369 gaagctcgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacctc 428
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gaagcttgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacctc 503
Query: 429 ccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgt 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgt 563
Query: 489 ctccgagggcactaaggccgttacgaagttcacctcgtcttagg 532
|||||||||||| ||||| || || ||||||||||| |||||||
Sbjct: 564 ctccgagggcaccaaggctgtcaccaagttcacctcttcttagg 607
Score = 44.1 bits (22), Expect = 0.017
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 603 tgatgatgatctgcgtgtaatt 624
||||||||||||||||||||||
Sbjct: 683 tgatgatgatctgcgtgtaatt 704
>gb|CW417908.1|CW417908 fsbb001f121c05f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f121c05, DNA
sequence
Length = 812
Score = 755 bits (381), Expect = 0.0
Identities = 443/464 (95%), Gaps = 6/464 (1%)
Strand = Plus / Plus
Query: 75 gatggcacccaaggcggagaagaagccggcggccaagaagcccgcggaggaggagcccgc 134
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 94 gatggcacccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgc 153
Query: 135 gacagagaaggtggagaaggctccggcggggaagaagcccaaggccgagaagcgcctccc 194
||| ||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 154 gaccgagaaggcggagaaggccccggcggggaagaagcccaaggccgagaagcggctccc 213
Query: 195 ggcgggcaagtcc------aaggagggcggcgagggcaagaaggggaaaaagaaggcgaa 248
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 214 cgcgggcaagtccgccggcaaggagggcggcgagggcaagaaggggaagaagaaggcgaa 273
Query: 249 gaagtccgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccccga 308
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 274 gaagtccgtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcacccgga 333
Query: 309 catcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcga 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 catcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcga 393
Query: 369 gaagctcgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacctc 428
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 gaagcttgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacctc 453
Query: 429 ccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgt 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 ccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgt 513
Query: 489 ctccgagggcactaaggccgttacgaagttcacctcgtcttagg 532
|||||||||||| ||||| || || ||||||||||| |||||||
Sbjct: 514 ctccgagggcaccaaggctgtcaccaagttcacctcttcttagg 557
Score = 46.1 bits (23), Expect = 0.004
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 603 tgatgatgatctgcgtgtaattg 625
|||||||||||||||||||||||
Sbjct: 633 tgatgatgatctgcgtgtaattg 655
>gb|BE355360.1|BE355360 DG1_114_A03.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 526
Score = 753 bits (380), Expect = 0.0
Identities = 442/463 (95%), Gaps = 6/463 (1%)
Strand = Plus / Plus
Query: 75 gatggcacccaaggcggagaagaagccggcggccaagaagcccgcggaggaggagcccgc 134
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 64 gatggcacccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgc 123
Query: 135 gacagagaaggtggagaaggctccggcggggaagaagcccaaggccgagaagcgcctccc 194
||| ||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 124 gaccgagaaggcggagaaggccccggcggggaagaagcccaaggccgagaagcggctccc 183
Query: 195 ggcgggcaagtcc------aaggagggcggcgagggcaagaaggggaaaaagaaggcgaa 248
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 184 cgcgggcaagtccgccggcaaggagggcggcgagggcaagaaggggaagaagaaggcgaa 243
Query: 249 gaagtccgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccccga 308
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 244 gaagtccgtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcacccgga 303
Query: 309 catcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcga 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 catcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcga 363
Query: 369 gaagctcgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacctc 428
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gaagcttgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacctc 423
Query: 429 ccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgt 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgt 483
Query: 489 ctccgagggcactaaggccgttacgaagttcacctcgtcttag 531
|||||||||||| ||||| || || ||||||||||| ||||||
Sbjct: 484 ctccgagggcaccaaggctgtcaccaagttcacctcttcttag 526
>gb|BG411209.1|BG411209 EM1_27_A01.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 498
Score = 722 bits (364), Expect = 0.0
Identities = 411/427 (96%), Gaps = 6/427 (1%)
Strand = Plus / Plus
Query: 75 gatggcacccaaggcggagaagaagccggcggccaagaagcccgcggaggaggagcccgc 134
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 72 gatggcacccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgc 131
Query: 135 gacagagaaggtggagaaggctccggcggggaagaagcccaaggccgagaagcgcctccc 194
||| ||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 132 gaccgagaaggcggagaaggccccggcggggaagaagcccaaggccgagaagcggctccc 191
Query: 195 ggcgggcaagtcc------aaggagggcggcgagggcaagaaggggaaaaagaaggcgaa 248
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 192 cgcgggcaagtccgccggcaaggagggcggcgagggcaagaaggggaagaagaaggcgaa 251
Query: 249 gaagtccgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccccga 308
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 252 gaagtccgtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcacccgga 311
Query: 309 catcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcga 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 catcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcga 371
Query: 369 gaagctcgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacctc 428
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gaagcttgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacctc 431
Query: 429 ccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgt 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgt 491
Query: 489 ctccgag 495
|||||||
Sbjct: 492 ctccgag 498
>gb|AW745446.1|AW745446 WS1_34_A02.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 500
Score = 718 bits (362), Expect = 0.0
Identities = 409/425 (96%), Gaps = 6/425 (1%)
Strand = Plus / Plus
Query: 75 gatggcacccaaggcggagaagaagccggcggccaagaagcccgcggaggaggagcccgc 134
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 74 gatggcacccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgc 133
Query: 135 gacagagaaggtggagaaggctccggcggggaagaagcccaaggccgagaagcgcctccc 194
||| ||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 134 gaccgagaaggcggagaaggccccggcggggaagaagcccaaggccgagaagcggctccc 193
Query: 195 ggcgggcaagtcc------aaggagggcggcgagggcaagaaggggaaaaagaaggcgaa 248
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 194 cgcgggcaagtccgccggcaaggagggcggcgagggcaagaaggggaagaagaaggcgaa 253
Query: 249 gaagtccgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccccga 308
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 254 gaagtccgtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcacccgga 313
Query: 309 catcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcga 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 catcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcga 373
Query: 369 gaagctcgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacctc 428
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gaagcttgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacctc 433
Query: 429 ccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgt 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgt 493
Query: 489 ctccg 493
|||||
Sbjct: 494 ctccg 498
>gb|AW680031.1|AW680031 WS1_34_A02.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 558
Score = 694 bits (350), Expect = 0.0
Identities = 409/429 (95%), Gaps = 6/429 (1%)
Strand = Plus / Plus
Query: 110 agaagcccgcggaggaggagcccgcgacagagaaggtggagaaggctccggcggggaaga 169
|||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||
Sbjct: 1 agaagcccgcggaggaggagcccgcgaccgagaaggcggagaaggccccggcggggaaga 60
Query: 170 agcccaaggccgagaagcgcctcccggcgggcaagtcc------aaggagggcggcgagg 223
||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||
Sbjct: 61 agcccaaggccgagaagcggctccccgcgggcaagtccgccggcaaggagggcggcgagg 120
Query: 224 gcaagaaggggaaaaagaaggcgaagaagtccgtggagacctacaagatctacatcttca 283
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcaagaaggggaagaagaaggcgaagaagtccgtggagacctacaagatctacatcttca 180
Query: 284 aggtgctgaagcaggtgcaccccgacatcggcatctcgtccaaggccatgtccatcatga 343
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 181 aggtgctcaagcaggtgcacccggacatcggcatctcgtccaaggccatgtccatcatga 240
Query: 344 actccttcatcaacgacatcttcgagaagctcgcggccgagtccgccaagctggcgcgct 403
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 241 actccttcatcaacgacatcttcgagaagcttgcggccgagtccgccaagctggcgcgct 300
Query: 404 acaacaagaagcccaccatcacctcccgcgagatccagacctcggtgcgcctcgtcctcc 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acaacaagaagcccaccatcacctcccgcgagatccagacctcggtgcgcctcgtcctcc 360
Query: 464 ccggcgagctcgccaagcacgccgtctccgagggcactaaggccgttacgaagttcacct 523
||||||||||||||||||||||||||||||||||||| ||||| || || ||||||||||
Sbjct: 361 ccggcgagctcgccaagcacgccgtctccgagggcaccaaggctgtcaccaagttcacct 420
Query: 524 cgtcttagg 532
| |||||||
Sbjct: 421 cttcttagg 429
Score = 46.1 bits (23), Expect = 0.004
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 603 tgatgatgatctgcgtgtaattg 625
|||||||||||||||||||||||
Sbjct: 505 tgatgatgatctgcgtgtaattg 527
>gb|BE355526.1|BE355526 DG1_114_A03.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 662
Score = 682 bits (344), Expect = 0.0
Identities = 403/423 (95%), Gaps = 6/423 (1%)
Strand = Plus / Plus
Query: 116 ccgcggaggaggagcccgcgacagagaaggtggagaaggctccggcggggaagaagccca 175
|||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||
Sbjct: 1 ccgcggaggaggagcccgcgaccgagaaggcggagaaggccccggcggggaagaagccca 60
Query: 176 aggccgagaagcgcctcccggcgggcaagtcc------aaggagggcggcgagggcaaga 229
||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 61 aggccgagaagcggctccccgcgggcaagtccgccggcaaggagggcggcgagggcaaga 120
Query: 230 aggggaaaaagaaggcgaagaagtccgtggagacctacaagatctacatcttcaaggtgc 289
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aggggaagaagaaggcgaagaagtccgtggagacctacaagatctacatcttcaaggtgc 180
Query: 290 tgaagcaggtgcaccccgacatcggcatctcgtccaaggccatgtccatcatgaactcct 349
| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcaagcaggtgcacccggacatcggcatctcgtccaaggccatgtccatcatgaactcct 240
Query: 350 tcatcaacgacatcttcgagaagctcgcggccgagtccgccaagctggcgcgctacaaca 409
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 241 tcatcaacgacatcttcgagaagcttgcggccgagtccgccaagctggcgcgctacaaca 300
Query: 410 agaagcccaccatcacctcccgcgagatccagacctcggtgcgcctcgtcctccccggcg 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agaagcccaccatcacctcccgcgagatccagacctcggtgcgcctcgtcctccccggcg 360
Query: 470 agctcgccaagcacgccgtctccgagggcactaaggccgttacgaagttcacctcgtctt 529
||||||||||||||||||||||||||||||| ||||| || || ||||||||||| ||||
Sbjct: 361 agctcgccaagcacgccgtctccgagggcaccaaggctgtcaccaagttcacctcttctt 420
Query: 530 agg 532
|||
Sbjct: 421 agg 423
Score = 46.1 bits (23), Expect = 0.004
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 603 tgatgatgatctgcgtgtaattg 625
|||||||||||||||||||||||
Sbjct: 499 tgatgatgatctgcgtgtaattg 521
>gb|BE355445.1|BE355445 DG1_114_A03.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 452
Score = 646 bits (326), Expect = 0.0
Identities = 373/389 (95%), Gaps = 6/389 (1%)
Strand = Plus / Plus
Query: 75 gatggcacccaaggcggagaagaagccggcggccaagaagcccgcggaggaggagcccgc 134
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 64 gatggcacccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgc 123
Query: 135 gacagagaaggtggagaaggctccggcggggaagaagcccaaggccgagaagcgcctccc 194
||| ||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 124 gaccgagaaggcggagaaggccccggcggggaagaagcccaaggccgagaagcggctccc 183
Query: 195 ggcgggcaagtcc------aaggagggcggcgagggcaagaaggggaaaaagaaggcgaa 248
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 184 cgcgggcaagtccgccggcaaggagggcggcgagggcaagaaggggaagaagaaggcgaa 243
Query: 249 gaagtccgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccccga 308
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 244 gaagtccgtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcacccgga 303
Query: 309 catcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcga 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 catcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcga 363
Query: 369 gaagctcgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacctc 428
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gaagcttgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacctc 423
Query: 429 ccgcgagatccagacctcggtgcgcctcg 457
|||||||||||||||||||||||||||||
Sbjct: 424 ccgcgagatccagacctcggtgcgcctcg 452
>gb|BG410872.1|BG410872 EM1_27_A01.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 537
Score = 636 bits (321), Expect = 0.0
Identities = 374/392 (95%), Gaps = 6/392 (1%)
Strand = Plus / Plus
Query: 147 ggagaaggctccggcggggaagaagcccaaggccgagaagcgcctcccggcgggcaagtc 206
||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 4 ggagaaggccccggcggggaagaagcccaaggccgagaagcggctccccgcgggcaagtc 63
Query: 207 c------aaggagggcggcgagggcaagaaggggaaaaagaaggcgaagaagtccgtgga 260
| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 64 cgccggcaaggagggcggcgagggcaagaaggggaagaagaaggcgaagaagtccgtgga 123
Query: 261 gacctacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcatctc 320
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 124 gacctacaagatctacatcttcaaggtgctcaagcaggtgcacccggacatcggcatctc 183
Query: 321 gtccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctcgcggc 380
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 184 gtccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagcttgcggc 243
Query: 381 cgagtccgccaagctggcgcgctacaacaagaagcccaccatcacctcccgcgagatcca 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 cgagtccgccaagctggcgcgctacaacaagaagcccaccatcacctcccgcgagatcca 303
Query: 441 gacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgtctccgagggcac 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgtctccgagggcac 363
Query: 501 taaggccgttacgaagttcacctcgtcttagg 532
||||| || || ||||||||||| |||||||
Sbjct: 364 caaggctgtcaccaagttcacctcttcttagg 395
Score = 46.1 bits (23), Expect = 0.004
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 603 tgatgatgatctgcgtgtaattg 625
|||||||||||||||||||||||
Sbjct: 471 tgatgatgatctgcgtgtaattg 493
>gb|BE917707.1|BE917707 OV1_6_B04.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 554
Score = 611 bits (308), Expect = e-173
Identities = 424/463 (91%), Gaps = 6/463 (1%)
Strand = Plus / Plus
Query: 75 gatggcacccaaggcggagaagaagccggcggccaagaagcccgcggaggaggagcccgc 134
|||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 87 gatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgc 146
Query: 135 gacagagaaggtggagaaggctccggcggggaagaagcccaaggccgagaagcgcctccc 194
| | ||||||| ||||||| | ||||||||||||||||| ||||| ||||||||||||||
Sbjct: 147 ggccgagaaggcggagaagaccccggcggggaagaagccgaaggcggagaagcgcctccc 206
Query: 195 ggcgggcaagtccaagg------agggcggcgagggcaagaaggggaaaaagaaggcgaa 248
||||||||||||| | ||| |||||||||||||||||| || |||||||| ||
Sbjct: 207 cgcgggcaagtccagcgccggcaaggacggcgagggcaagaagggcaagaagaaggccaa 266
Query: 249 gaagtccgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccccga 308
|||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 267 gaagagcgtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcacccgga 326
Query: 309 catcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcga 368
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 catcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcga 386
Query: 369 gaagctcgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacctc 428
||||||||| ||||||||||||||||| || |||||||||||||||||||||||||| ||
Sbjct: 387 gaagctcgccgccgagtccgccaagctcgcccgctacaacaagaagcccaccatcacgtc 446
Query: 429 ccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgt 488
||| ||||||||||| || || ||||||||||||||||| ||||||||||||||||||||
Sbjct: 447 ccgagagatccagacttccgtccgcctcgtcctccccggggagctcgccaagcacgccgt 506
Query: 489 ctccgagggcactaaggccgttacgaagttcacctcgtcttag 531
|||||||||||| |||||||| || ||||||||||||||||||
Sbjct: 507 ctccgagggcaccaaggccgtcaccaagttcacctcgtcttag 549
>gb|BE917630.1|BE917630 OV1_6_B04.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 493
Score = 583 bits (294), Expect = e-165
Identities = 424/465 (91%), Gaps = 8/465 (1%)
Strand = Plus / Plus
Query: 75 gatggcacccaaggcggagaagaagccggcggccaagaagcccgcggaggaggagcccgc 134
|||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 11 gatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgc 70
Query: 135 gacagagaaggtggagaaggctccggcggggaagaagcccaaggccgagaagcgcctccc 194
| | ||||||| ||||||| | ||||||||||||||||| ||||| ||||||||||||||
Sbjct: 71 ggccgagaaggcggagaagaccccggcggggaagaagccgaaggcggagaagcgcctccc 130
Query: 195 ggcgggcaagtccaagg------agggcggcgagggcaagaaggggaaaaagaaggcgaa 248
||||||||||||| | ||| |||||||||||||||||| || |||||||| ||
Sbjct: 131 cgcgggcaagtccagcgccggcaaggacggcgagggcaagaagggcaagaagaaggccaa 190
Query: 249 gaagtccgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccccga 308
|||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 191 gaagagcgtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcacccgga 250
Query: 309 catcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcga 368
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 catcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcga 310
Query: 369 gaagctcgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacctc 428
||||||||| ||||||||||||||||| || |||||||||||||||||||||||||| ||
Sbjct: 311 gaagctcgccgccgagtccgccaagctcgcccgctacaacaagaagcccaccatcacgtc 370
Query: 429 ccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgt 488
||| ||||||||||| || || ||||||||||||||||| ||||||||||||||||||||
Sbjct: 371 ccgagagatccagacttccgtccgcctcgtcctccccggggagctcgccaagcacgccgt 430
Query: 489 ctc-cgagggc-actaaggccgttacgaagttcacctcgtcttag 531
||| ||||||| || |||||||| || ||||||||||||||||||
Sbjct: 431 ctcacgagggcaaccaaggccgtcaccaagttcacctcgtcttag 475
>gb|CW188377.1|CW188377 104_608_11172997_148_36734_061 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11172997, DNA
sequence
Length = 707
Score = 577 bits (291), Expect = e-163
Identities = 422/466 (90%), Gaps = 21/466 (4%)
Strand = Plus / Plus
Query: 75 gatggcacccaaggcggagaagaagccggcggccaagaagccc---gcggaggaggagcc 131
|||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 103 gatggctcccaaggcggagaagaagccggcggcgaagaagcccgcggcggaggaggagcc 162
Query: 132 cgcgacagagaaggtggagaaggctccggcggggaagaagcccaaggccgagaagcgcct 191
|||| | ||||| ||| ||||||||||||||||||||||| |||||||||||
Sbjct: 163 cgcggccgagaa---------ggccccggcggggaagaagcccaaggcggagaagcgcct 213
Query: 192 cccggcgggcaagtc------caaggagggcggcgagggcaagaaggggaaaaagaaggc 245
||||||||||||||| |||||| |||||||| |||||||||||| ||||||||
Sbjct: 214 cccggcgggcaagtcggccggcaaggaaggcggcga---caagaaggggaagaagaaggc 270
Query: 246 gaagaagtccgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccc 305
|||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 271 caagaagtcggtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcaccc 330
Query: 306 cgacatcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatctt 365
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 tgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatctt 390
Query: 366 cgagaagctcgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcac 425
|||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 391 cgagaagctcgccgccgaggccgccaagctcgcgcgctacaacaagaagcccaccatcac 450
Query: 426 ctcccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgc 485
|||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 ctccagggagatccagacgtcggtgcgcctcgtcctccccggcgagctcgccaagcacgc 510
Query: 486 cgtctccgagggcactaaggccgttacgaagttcacctcgtcttag 531
||||||||||||||| |||||||| || ||||||||||| ||||||
Sbjct: 511 cgtctccgagggcaccaaggccgtcaccaagttcacctcatcttag 556
>gb|CW191309.1|CW191309 104_613_11178426_116_36942_075 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11178426, DNA
sequence
Length = 724
Score = 575 bits (290), Expect = e-162
Identities = 419/463 (90%), Gaps = 18/463 (3%)
Strand = Plus / Plus
Query: 75 gatggcacccaaggcggagaagaagccggcggccaagaagcccgcggaggaggagcccgc 134
|||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 162 gatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgc 221
Query: 135 gacagagaaggtggagaaggctccggcggggaagaagcccaaggccgagaagcgcctccc 194
| | ||||| ||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 222 ggccgagaa---------ggccccggcggggaagaagcccaaggcggagaagcgcctccc 272
Query: 195 ggcgggcaagtc------caaggagggcggcgagggcaagaaggggaaaaagaaggcgaa 248
||||||||||| ||||||||||||||| ||||||||| || |||||||| ||
Sbjct: 273 cgcgggcaagtctgccggcaaggagggcggcga---caagaagggcaagaagaaggccaa 329
Query: 249 gaagtccgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccccga 308
|||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 330 gaagtcggtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcaccccga 389
Query: 309 catcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcga 368
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 catcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcga 449
Query: 369 gaagctcgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacctc 428
||||||||| | |||| |||||||||| || |||||||||||||||||||||||||||||
Sbjct: 450 gaagctcgccggcgaggccgccaagctcgcccgctacaacaagaagcccaccatcacctc 509
Query: 429 ccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgt 488
| | ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 510 cagggagatccagacgtcggtgcgcctcgtcctcccaggcgagctcgccaagcacgccgt 569
Query: 489 ctccgagggcactaaggccgttacgaagttcacctcgtcttag 531
||||||||||| ||||||||||| ||||||||||| ||||||
Sbjct: 570 gtccgagggcaccaaggccgttaccaagttcacctcatcttag 612
>gb|CF071535.1|CF071535 FE1_17_C03.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_17_C03_A002 3', mRNA sequence
Length = 466
Score = 555 bits (280), Expect = e-156
Identities = 307/316 (97%)
Strand = Plus / Plus
Query: 217 ggcgagggcaagaaggggaaaaagaaggcgaagaagtccgtggagacctacaagatctac 276
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 26 ggcgagggcaagaaggggaagaagaaggcgaagaagtccgtggagacctacaagatctac 85
Query: 277 atcttcaaggtgctgaagcaggtgcaccccgacatcggcatctcgtccaaggccatgtcc 336
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 86 atcttcaaggtgctcaagcaggtgcacccggacatcggcatctcgtccaaggccatgtcc 145
Query: 337 atcatgaactccttcatcaacgacatcttcgagaagctcgcggccgagtccgccaagctg 396
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 146 atcatgaactccttcatcaacgacatcttcgagaagcttgcggccgagtccgccaagctg 205
Query: 397 gcgcgctacaacaagaagcccaccatcacctcccgcgagatccagacctcggtgcgcctc 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gcgcgctacaacaagaagcccaccatcacctcccgcgagatccagacctcggtgcgcctc 265
Query: 457 gtcctccccggcgagctcgccaagcacgccgtctccgagggcactaaggccgttacgaag 516
|||||||||||||||||||||||||||||||||||||||||||| ||||| || || |||
Sbjct: 266 gtcctccccggcgagctcgccaagcacgccgtctccgagggcaccaaggctgtcaccaag 325
Query: 517 ttcacctcgtcttagg 532
|||||||| |||||||
Sbjct: 326 ttcacctcttcttagg 341
Score = 46.1 bits (23), Expect = 0.004
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 603 tgatgatgatctgcgtgtaattg 625
|||||||||||||||||||||||
Sbjct: 417 tgatgatgatctgcgtgtaattg 439
>gb|CW183462.1|CW183462 104_599_11164629_148_36672_089 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11164629, DNA
sequence
Length = 693
Score = 551 bits (278), Expect = e-155
Identities = 416/463 (89%), Gaps = 18/463 (3%)
Strand = Plus / Plus
Query: 76 atggcacccaaggcggagaagaagccggcggccaagaagcccgcggaggaggagcccgcg 135
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 59 atggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgcg 118
Query: 136 acagagaaggtggagaaggctccggcggggaagaagcccaaggccgagaagcgcctcccg 195
| ||||| ||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 119 gccgagaa---------ggcgccggcggggaagaagcccaaggcggagaagcgcctcccg 169
Query: 196 gcgggcaagtc------caaggagggcggcgagggcaagaaggggaaaaagaaggcgaag 249
||||||||||| ||||||||| ||||| ||||||||| || |||||||| |||
Sbjct: 170 gcgggcaagtcggccggcaaggaggggggcga---caagaagggcaagaagaaggctaag 226
Query: 250 aagtccgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccccgac 309
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 227 aagtcggtggagacctacaagatctacatcttcaaggtgctgaagcaggtccaccccgac 286
Query: 310 atcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcgag 369
| ||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 287 accggcatctcctccaaggccatgtccatcatgaattccttcatcaacgatatcttcgag 346
Query: 370 aagctcgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacctcc 429
|||||||| | ||| |||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 347 aagctcgccggcgaagccgccaagctcgcgcgctacaacaaaaagcccaccatcacctcc 406
Query: 430 cgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgtc 489
| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 407 agggagatccagacctccgtccgcctcgtcctccccggcgagctcgccaagcacgccgtc 466
Query: 490 tccgagggcactaaggccgttacgaagttcacctcgtcttagg 532
||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 467 tccgagggcaccaaggccgttaccaagttcacctcatcttagg 509
>gb|CD464058.1|CD464058 ETH1_48_H05.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_48_H05_A002 3', mRNA sequence
Length = 746
Score = 551 bits (278), Expect = e-155
Identities = 416/463 (89%), Gaps = 18/463 (3%)
Strand = Plus / Plus
Query: 76 atggcacccaaggcggagaagaagccggcggccaagaagcccgcggaggaggagcccgcg 135
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 19 atggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgcg 78
Query: 136 acagagaaggtggagaaggctccggcggggaagaagcccaaggccgagaagcgcctcccg 195
| ||||| ||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 79 gccgagaa---------ggcgccggcggggaagaagcccaaggcggagaagcgcctcccg 129
Query: 196 gcgggcaagtc------caaggagggcggcgagggcaagaaggggaaaaagaaggcgaag 249
||||||||||| ||||||||| ||||| ||||||||| || |||||||| |||
Sbjct: 130 gcgggcaagtcggccggcaaggaggggggcga---caagaagggcaagaagaaggctaag 186
Query: 250 aagtccgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccccgac 309
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 187 aagtcggtggagacctacaagatctacatcttcaaggtgctgaagcaggtccaccccgac 246
Query: 310 atcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcgag 369
| ||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 247 accggcatctcctccaaggccatgtccatcatgaattccttcatcaacgatatcttcgag 306
Query: 370 aagctcgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacctcc 429
|||||||| | ||| |||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 307 aagctcgccggcgaagccgccaagctcgcgcgctacaacaaaaagcccaccatcacctcc 366
Query: 430 cgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgtc 489
| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 367 agggagatccagacctccgtccgcctcgtcctccccggcgagctcgccaagcacgccgtc 426
Query: 490 tccgagggcactaaggccgttacgaagttcacctcgtcttagg 532
||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 427 tccgagggcaccaaggccgttaccaagttcacctcatcttagg 469
>gb|CW156116.1|CW156116 104_558_11146509_148_36368_081 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11146509, DNA
sequence
Length = 670
Score = 545 bits (275), Expect = e-153
Identities = 322/338 (95%), Gaps = 6/338 (1%)
Strand = Plus / Minus
Query: 75 gatggcacccaaggcggagaagaagccggcggccaagaagcccgcggaggaggagcccgc 134
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 338 gatggcacccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgc 279
Query: 135 gacagagaaggtggagaaggctccggcggggaagaagcccaaggccgagaagcgcctccc 194
||| ||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 278 gaccgagaaggcggagaaggccccggcggggaagaagcccaaggccgagaagcggctccc 219
Query: 195 ggcgggcaagtcc------aaggagggcggcgagggcaagaaggggaaaaagaaggcgaa 248
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 218 cgcgggcaagtccgccggcaaggagggcggcgagggcaagaaggggaagaagaaggcgaa 159
Query: 249 gaagtccgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccccga 308
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 158 gaagtccgtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcacccgga 99
Query: 309 catcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcga 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 catcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcga 39
Query: 369 gaagctcgcggccgagtccgccaagctggcgcgctaca 406
|||||| |||||||||||||||||||||||||||||||
Sbjct: 38 gaagcttgcggccgagtccgccaagctggcgcgctaca 1
>gb|AI724175.1|AI724175 RHIZ1_8_A04.y2_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 509
Score = 541 bits (273), Expect = e-152
Identities = 361/390 (92%), Gaps = 9/390 (2%)
Strand = Plus / Plus
Query: 148 gagaaggctccggcggggaagaagcccaaggccgagaagcgcctcccggcgggcaagtc- 206
|||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 5 gagaaggccccggcggggaagaagcccaaggcggagaagcgcctcccggcgggcaagtcg 64
Query: 207 -----caaggagggcggcgagggcaagaaggggaaaaagaaggcgaagaagtccgtggag 261
||||||||||||||| ||||||||| || |||||||| |||||||| ||||||
Sbjct: 65 gccggcaaggagggcggcga---caagaagggcaagaagaaggccaagaagtcggtggag 121
Query: 262 acctacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcatctcg 321
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 acctacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcatctcc 181
Query: 322 tccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctcgcggcc 381
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 182 tccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctcgccggc 241
Query: 382 gagtccgccaagctggcgcgctacaacaagaagcccaccatcacctcccgcgagatccag 441
||| |||||||||| || |||||||||||||||||||||||||||||| | |||||||||
Sbjct: 242 gaggccgccaagctcgcccgctacaacaagaagcccaccatcacctccagggagatccag 301
Query: 442 acctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgtctccgagggcact 501
|| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 302 acgtcggtgcgcctcgtcctcccaggcgagctcgccaagcacgccgtgtccgagggcacc 361
Query: 502 aaggccgttacgaagttcacctcgtcttag 531
||||||||||| ||||||||||| ||||||
Sbjct: 362 aaggccgttaccaagttcacctcatcttag 391
>gb|CW317075.1|CW317075 104_808_11473223_116_35851_084 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11473223, DNA
sequence
Length = 600
Score = 504 bits (254), Expect = e-141
Identities = 278/286 (97%)
Strand = Plus / Minus
Query: 247 aagaagtccgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcacccc 306
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 600 aagaagtccgtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcacccg 541
Query: 307 gacatcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttc 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gacatcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttc 481
Query: 367 gagaagctcgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacc 426
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gagaagcttgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacc 421
Query: 427 tcccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgcc 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tcccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgcc 361
Query: 487 gtctccgagggcactaaggccgttacgaagttcacctcgtcttagg 532
|||||||||||||| ||||| || || ||||||||||| |||||||
Sbjct: 360 gtctccgagggcaccaaggctgtcaccaagttcacctcttcttagg 315
Score = 46.1 bits (23), Expect = 0.004
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 603 tgatgatgatctgcgtgtaattg 625
|||||||||||||||||||||||
Sbjct: 239 tgatgatgatctgcgtgtaattg 217
>gb|BE599532.1|BE599532 PI1_88_F07.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 491
Score = 496 bits (250), Expect = e-138
Identities = 379/423 (89%), Gaps = 18/423 (4%)
Strand = Plus / Plus
Query: 76 atggcacccaaggcggagaagaagccggcggccaagaagcccgcggaggaggagcccgcg 135
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 81 atggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgcg 140
Query: 136 acagagaaggtggagaaggctccggcggggaagaagcccaaggccgagaagcgcctcccg 195
| ||||| ||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 141 gccgagaa---------ggcgccggcggggaagaagcccaaggcggagaagcgcctcccg 191
Query: 196 gcgggcaagtc------caaggagggcggcgagggcaagaaggggaaaaagaaggcgaag 249
||||||||||| ||||||||| ||||| ||||||||| || |||||||| |||
Sbjct: 192 gcgggcaagtcggccggcaaggaggggggcga---caagaagggcaagaagaaggctaag 248
Query: 250 aagtccgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccccgac 309
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 249 aagtcggtggagacctacaagatctacatcttcaaggtgctgaagcaggtccaccccgac 308
Query: 310 atcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcgag 369
| ||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 309 accggcatctcctccaaggccatgtccatcatgaattccttcatcaacgatatcttcgag 368
Query: 370 aagctcgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacctcc 429
|||||||| | ||| |||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 369 aagctcgccggcgaagccgccaagctcgcgcgctacaacaaaaagcccaccatcacctcc 428
Query: 430 cgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgtc 489
| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 429 agggagatccagacctccgtccgcctcgtcctccccggcgagctcgccaagcacgccgtc 488
Query: 490 tcc 492
|||
Sbjct: 489 tcc 491
>gb|CW463246.1|CW463246 fsbb001f211m02f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f211m02, DNA
sequence
Length = 667
Score = 492 bits (248), Expect = e-137
Identities = 360/397 (90%), Gaps = 9/397 (2%)
Strand = Plus / Plus
Query: 76 atggcacccaaggcggagaagaagccggcggccaagaagcccgcggaggaggagcccgcg 135
||||| |||||||| ||||||||||| |||||||||||||| |||||||||||||| ||
Sbjct: 274 atggcgcccaaggccgagaagaagcccgcggccaagaagccggcggaggaggagccatcg 333
Query: 136 acagagaaggtggagaaggctccggcggggaagaagcccaaggccgagaagcgcctcccg 195
|| ||||||| |||||||| ||||||||||||||||| |||||||||||||| ||||||
Sbjct: 334 acggagaaggcagagaaggccccggcggggaagaagccgaaggccgagaagcggctcccg 393
Query: 196 gcgggcaagtcc------aaggagggcggcgagggcaagaaggggaaaaagaaggcgaag 249
||||||||||| ||||| ||||||||| |||||||| || ||||||||||||
Sbjct: 394 tcgggcaagtccgcgggcaaggaaggcggcgag---aagaagggaaagaagaaggcgaag 450
Query: 250 aagtccgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccccgac 309
||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 451 aagtcggtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggac 510
Query: 310 atcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcgag 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 atcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcgag 570
Query: 370 aagctcgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacctcc 429
||||| ||||| ||| | |||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 571 aagctggcggcggaggcggccaagctggcgcggtacaacaagaagcccaccatcacgtcc 630
Query: 430 cgcgagatccagacctcggtgcgcctcgtcctccccg 466
|| |||||||||||||| || ||||||||||||||||
Sbjct: 631 cgggagatccagacctccgtccgcctcgtcctccccg 667
>gb|BF704683.1|BF704683 FM1_50_B08.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 563
Score = 486 bits (245), Expect = e-135
Identities = 354/390 (90%), Gaps = 9/390 (2%)
Strand = Plus / Plus
Query: 139 gagaaggtggagaaggctccggcggggaagaagcccaaggccgagaagcgcctcccggcg 198
||||||| ||||||||| || || ||||||||||||||||||||||||||||| || ||
Sbjct: 133 gagaaggcggagaaggcgcccgcagggaagaagcccaaggccgagaagcgcctgcccgcc 192
Query: 199 ggcaagtcc------aaggagggcggcgagggcaagaaggggaaaaagaaggcgaagaag 252
||||||| ||||||||||||||| ||||||||||| |||||||| ||||||
Sbjct: 193 tccaagtcctccggcaaggagggcggcgag---aagaaggggaagaagaaggccaagaag 249
Query: 253 tccgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatc 312
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 agcgtggagacctacaaaatctacatcttcaaggtgctgaagcaggtgcaccccgacatc 309
Query: 313 ggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaag 372
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaag 369
Query: 373 ctcgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacctcccgc 432
||||| | |||| |||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 370 ctcgccggcgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgc 429
Query: 433 gagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgtctcc 492
|||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 430 gagatccaaacctccgtgcgcctcgtcctccccggagagctcgccaagcacgccgtctcc 489
Query: 493 gagggcactaaggccgttacgaagttcacc 522
||||| || |||||||| || |||||||||
Sbjct: 490 gagggaaccaaggccgtcaccaagttcacc 519
Score = 44.1 bits (22), Expect = 0.017
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 75 gatggcacccaaggcggagaagaagccggcggccaagaagcc 116
|||||| |||||||| ||||||||||| |||| ||||||||
Sbjct: 81 gatggcgcccaaggccgagaagaagccagcggagaagaagcc 122
>gb|BG488416.1|BG488416 RHIZ2_63_D10.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 556
Score = 478 bits (241), Expect = e-133
Identities = 409/464 (88%), Gaps = 12/464 (2%)
Strand = Plus / Plus
Query: 75 gatggcacccaaggcggagaagaagccggcggccaagaagcccgcggaggaggagcccgc 134
|||||| ||||||||||||||||||||||| || |||||||||| |||||||||| ||||
Sbjct: 82 gatggcgcccaaggcggagaagaagccggcagcgaagaagcccgtggaggaggagtccgc 141
Query: 135 gacagagaaggtggagaaggctccggcggggaagaagcccaaggccgagaagcgcctccc 194
| | | | ||||||||| || |||||||||||||||||||| |||||||| |||||
Sbjct: 142 ggccccg---gcggagaaggcccccgcggggaagaagcccaaggcggagaagcgtctccc 198
Query: 195 ggcgggcaagtcc------aaggagggcggcgagggcaagaaggggaaaaagaaggcgaa 248
||||||||||||| ||||||||||||||| |||| ||| ||||||| ||
Sbjct: 199 ggcgggcaagtccgccagcaaggagggcggcgag---aagaggggtcggaagaagggcaa 255
Query: 249 gaagtccgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccccga 308
|||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 256 gaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccgga 315
Query: 309 catcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcga 368
|||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 316 catcggtatctcctccaaggccatgtccatcatgaactccttcatcaatgacatcttcga 375
Query: 369 gaagctcgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacctc 428
||||||||| | |||| |||||||||| || |||||||||||||||||||||||||| ||
Sbjct: 376 gaagctcgccggcgaggccgccaagctcgcccgctacaacaagaagcccaccatcacttc 435
Query: 429 ccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgt 488
|| |||||||||||||| || ||||||||||||||||| ||||||||||||||||||||
Sbjct: 436 tcgggagatccagacctccgtccgcctcgtcctccccggggagctcgccaagcacgccgt 495
Query: 489 ctccgagggcactaaggccgttacgaagttcacctcgtcttagg 532
||| |||||||| |||||||| || |||||||||||||||||||
Sbjct: 496 ctctgagggcaccaaggccgtcaccaagttcacctcgtcttagg 539
>gb|CW129063.1|CW129063 104_511_11114353_148_34760_015 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11114353, DNA
sequence
Length = 698
Score = 476 bits (240), Expect = e-132
Identities = 355/394 (90%), Gaps = 12/394 (3%)
Strand = Plus / Plus
Query: 147 ggagaaggctccggcggggaagaagcccaaggccgagaagcgcctcccggcgggcaagtc 206
||||||||| || |||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 250 ggagaaggcccccgcggggaagaagcccaaggcggagaagcggctcccggcgggcaagtc 309
Query: 207 ---------caaggagggcggcgagggcaagaaggggaaaaagaaggcgaagaagtccgt 257
|||||||||||||||| |||||||||| ||||||| |||||| |||
Sbjct: 310 gtccgccggcaaggagggcggcgag---aagaaggggaggaagaagggcaagaagagcgt 366
Query: 258 ggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcat 317
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 367 ggagacctacaagatctacatcttcaaggtcctgaagcaggtgcacccggacatcggcat 426
Query: 318 ctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctcgc 377
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 427 ctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctggc 486
Query: 378 ggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacctcccgcgagat 437
|| |||||||||||||| || ||||||||||||||||||||||| ||||||||||||||
Sbjct: 487 cgcggagtccgccaagctcgcccgctacaacaagaagcccaccattacctcccgcgagat 546
Query: 438 ccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgtctccgaggg 497
||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 547 ccagacctccgtccgcctcgtcctccccggggagctcgccaagcacgccgtctccgaggg 606
Query: 498 cactaaggccgttacgaagttcacctcgtcttag 531
|| |||||||| || ||||||||||| ||||||
Sbjct: 607 taccaaggccgtcaccaagttcacctcctcttag 640
Score = 83.8 bits (42), Expect = 2e-014
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 75 gatggcacccaaggcggagaagaagccggcggccaagaagcccgcggaggaggagccc 132
|||||| |||||||| ||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 172 gatggcgcccaaggcagagaagaagccggcgtcgaagaagcccgcggaggaggagccc 229
>gb|CD213713.1|CD213713 HS1_52_G12.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_52_G12_A012 5', mRNA sequence
Length = 729
Score = 472 bits (238), Expect = e-131
Identities = 409/467 (87%), Gaps = 18/467 (3%)
Strand = Plus / Plus
Query: 75 gatggcacccaaggcggagaagaagccggcggccaagaagcccgcggaggaggagcccgc 134
|||||| |||||||| ||||||||||| ||||| ||||||| |||||||||||||||||
Sbjct: 82 gatggcgcccaaggccgagaagaagcccgcggcgaagaagctggcggaggaggagcccgc 141
Query: 135 gacagagaaggtggagaaggctccggcggggaagaagcccaaggccgagaagcgcctccc 194
| | ||||||| | ||||| ||||||||||||||||| |||||||| |||||
Sbjct: 142 ggc---------ggagaagacgccggccgggaagaagcccaaggcggagaagcgtctccc 192
Query: 195 ggcgggcaagtcc------aaggagggcggcg---agggcaagaaggggaaaaagaaggc 245
|| ||||||||| ||||||||||||| |||||||| ||| |||||||
Sbjct: 193 cgctggcaagtccgccggcaaggagggcggcggcgagggcaagcggggccggaagaaggg 252
Query: 246 gaagaagtccgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccc 305
|||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 caagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcaccc 312
Query: 306 cgacatcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatctt 365
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatctt 372
Query: 366 cgagaagctcgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcac 425
|||||||||||| |||||| |||||||||| ||||| |||||||||||||||||||||||
Sbjct: 373 cgagaagctcgccgccgaggccgccaagctcgcgcggtacaacaagaagcccaccatcac 432
Query: 426 ctcccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgc 485
||||||||||||||||||||| || ||||||||||||||||| | |||||||||||||||
Sbjct: 433 ctcccgcgagatccagacctccgtccgcctcgtcctccccggggggctcgccaagcacgc 492
Query: 486 cgtctccgagggcactaaggccgttacgaagttcacctcgtcttagg 532
|||||| |||||||| |||||||| || |||||||||||||| ||||
Sbjct: 493 cgtctctgagggcaccaaggccgtcaccaagttcacctcgtcctagg 539
>gb|AW564395.1|AW564395 LG1_292_F12.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 568
Score = 470 bits (237), Expect = e-131
Identities = 352/390 (90%), Gaps = 9/390 (2%)
Strand = Plus / Plus
Query: 139 gagaaggtggagaaggctccggcggggaagaagcccaaggccgagaagcgcctcccggcg 198
||||||| ||||||||| || || || |||||||||||||||||||||||||| || ||
Sbjct: 128 gagaaggcggagaaggcgcccgcaggaaagaagcccaaggccgagaagcgcctgcccgcc 187
Query: 199 ggcaagtcc------aaggagggcggcgagggcaagaaggggaaaaagaaggcgaagaag 252
||||||| ||||||||||||||| ||||||||||| |||||||| ||||||
Sbjct: 188 tccaagtcctccggtaaggagggcggcgag---aagaaggggaagaagaaggccaagaag 244
Query: 253 tccgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatc 312
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 agcgtggagacctacaaaatctacatcttcaaggtgctgaagcaggtgcaccccgacatc 304
Query: 313 ggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaag 372
|||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 305 ggcatctcctccaaggccatgtccatcatgaactccttcatcaatgacatcttcgagaag 364
Query: 373 ctcgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacctcccgc 432
||||| | |||| |||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 365 ctcgccggcgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgc 424
Query: 433 gagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgtctcc 492
|||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 425 gagatccaaacctccgtgcgcctcgtcctccccggagagctcgccaagcacgccgtctcc 484
Query: 493 gagggcactaaggccgttacgaagttcacc 522
||||| || |||||||| || |||||||||
Sbjct: 485 gagggaaccaaggccgtcaccaagttcacc 514
Score = 44.1 bits (22), Expect = 0.017
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 75 gatggcacccaaggcggagaagaagccggcggccaagaagcc 116
|||||| |||||||| ||||||||||| |||| ||||||||
Sbjct: 76 gatggcgcccaaggccgagaagaagccagcggagaagaagcc 117
>gb|BE593143.1|BE593143 WS1_98_A10.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 596
Score = 470 bits (237), Expect = e-131
Identities = 352/390 (90%), Gaps = 9/390 (2%)
Strand = Plus / Plus
Query: 139 gagaaggtggagaaggctccggcggggaagaagcccaaggccgagaagcgcctcccggcg 198
||||||| ||||||||| || || || |||||||||||||||||||||||||| || ||
Sbjct: 74 gagaaggcggagaaggcgcccgcaggaaagaagcccaaggccgagaagcgcctgcccgcc 133
Query: 199 ggcaagtcc------aaggagggcggcgagggcaagaaggggaaaaagaaggcgaagaag 252
||||||| ||||||||||||||| ||||||||||| |||||||| ||||||
Sbjct: 134 tccaagtcctccggtaaggagggcggcgag---aagaaggggaagaagaaggccaagaag 190
Query: 253 tccgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatc 312
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 agcgtggagacctacaaaatctacatcttcaaggtgctgaagcaggtgcaccccgacatc 250
Query: 313 ggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaag 372
|||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 251 ggcatctcctccaaggccatgtccatcatgaactccttcatcaatgacatcttcgagaag 310
Query: 373 ctcgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacctcccgc 432
||||| | |||| |||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 311 ctcgccggcgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgc 370
Query: 433 gagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgtctcc 492
|||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 371 gagatccaaacctccgtgcgcctcgtcctccccggagagctcgccaagcacgccgtctcc 430
Query: 493 gagggcactaaggccgttacgaagttcacc 522
||||| || |||||||| || |||||||||
Sbjct: 431 gagggaaccaaggccgtcaccaagttcacc 460
Score = 44.1 bits (22), Expect = 0.017
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 75 gatggcacccaaggcggagaagaagccggcggccaagaagcc 116
|||||| |||||||| ||||||||||| |||| ||||||||
Sbjct: 22 gatggcgcccaaggccgagaagaagccagcggagaagaagcc 63
>gb|BG102543.1|BG102543 RHIZ2_34_D04.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 495
Score = 470 bits (237), Expect = e-131
Identities = 343/379 (90%), Gaps = 12/379 (3%)
Strand = Plus / Plus
Query: 162 ggggaagaagcccaaggccgagaagcgcctcccggcgggcaagtc---------caagga 212
|||||||||||||||||| |||||||| ||||||||||||||||| ||||||
Sbjct: 1 ggggaagaagcccaaggcggagaagcggctcccggcgggcaagtcgtccgtcggcaagga 60
Query: 213 gggcggcgagggcaagaaggggaaaaagaaggcgaagaagtccgtggagacctacaagat 272
|||||||||| |||||||||| ||||||| ||||||| ||||||||||||||||||
Sbjct: 61 gggcggcgag---aagaaggggaggaagaaggggaagaagagcgtggagacctacaagat 117
Query: 273 ctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcatctcgtccaaggccat 332
||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 118 ctacatcttcaaggtcctgaagcaggtgcacccggacatcggcatctcctccaaggccat 177
Query: 333 gtccatcatgaactccttcatcaacgacatcttcgagaagctcgcggccgagtccgccaa 392
|||||||||||||||||||||||||||||||||||||||||| || || |||||||||||
Sbjct: 178 gtccatcatgaactccttcatcaacgacatcttcgagaagctggccgcggagtccgccaa 237
Query: 393 gctggcgcgctacaacaagaagcccaccatcacctcccgcgagatccagacctcggtgcg 452
||| || ||||||||||||||||||||||| ||||||||||||||||||||||| || ||
Sbjct: 238 gctcgcccgctacaacaagaagcccaccattacctcccgcgagatccagacctccgtccg 297
Query: 453 cctcgtcctccccggcgagctcgccaagcacgccgtctccgagggcactaaggccgttac 512
||||||||||||||| ||||||||||||||||||||||||||||| || |||||||| ||
Sbjct: 298 cctcgtcctccccggggagctcgccaagcacgccgtctccgagggtaccaaggccgtcac 357
Query: 513 gaagttcacctcgtcttag 531
||||||||||| ||||||
Sbjct: 358 caagttcacctcctcttag 376
>gb|BG240440.1|BG240440 OV1_30_A12.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 555
Score = 470 bits (237), Expect = e-131
Identities = 408/464 (87%), Gaps = 12/464 (2%)
Strand = Plus / Plus
Query: 75 gatggcacccaaggcggagaagaagccggcggccaagaagcccgcggaggaggagcccgc 134
|||||| ||||||||||||||||||||||| || |||||||||| ||||||||| ||||
Sbjct: 76 gatggcgcccaaggcggagaagaagccggcagcgaagaagcccgtggaggaggaatccgc 135
Query: 135 gacagagaaggtggagaaggctccggcggggaagaagcccaaggccgagaagcgcctccc 194
| | | | ||||||| | || |||||||||||||||||||| |||||||| |||||
Sbjct: 136 ggccccg---gcggagaagccccccgcggggaagaagcccaaggcggagaagcgtctccc 192
Query: 195 ggcgggcaagtcc------aaggagggcggcgagggcaagaaggggaaaaagaaggcgaa 248
||||||||||||| ||||||||||||||| |||| ||| ||||||| ||
Sbjct: 193 ggcgggcaagtccgccagcaaggagggcggcgag---aagaggggtcggaagaagggcaa 249
Query: 249 gaagtccgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccccga 308
|||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 250 gaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccgga 309
Query: 309 catcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcga 368
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 310 catcggcatctcctccaaggccatgtccatcatgaactcgttcatcaacgacatcttcga 369
Query: 369 gaagctcgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacctc 428
||||||||| | |||| |||||||||| || |||||||||||||||||||||||||| ||
Sbjct: 370 gaagctcgccggcgaggccgccaagctcgcccgctacaacaagaagcccaccatcacttc 429
Query: 429 ccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgt 488
|| |||||||||||||| || ||||||||||||||||| ||||||||||||||||||||
Sbjct: 430 tcgggagatccagacctccgtccgcctcgtcctccccggggagctcgccaagcacgccgt 489
Query: 489 ctccgagggcactaaggccgttacgaagttcacctcgtcttagg 532
||| |||||||| |||||||| || |||||||||||||||||||
Sbjct: 490 ctctgagggcaccaaggccgtcaccaagttcacctcgtcttagg 533
>gb|CD431873.1|CD431873 ETH1_11_A02.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_11_A02_A002 5', mRNA sequence
Length = 667
Score = 470 bits (237), Expect = e-131
Identities = 352/390 (90%), Gaps = 9/390 (2%)
Strand = Plus / Plus
Query: 139 gagaaggtggagaaggctccggcggggaagaagcccaaggccgagaagcgcctcccggcg 198
||||||| ||||||||| || || || |||||||||||||||||||||||||| || ||
Sbjct: 152 gagaaggcggagaaggcgcccgcaggaaagaagcccaaggccgagaagcgcctgcccgcc 211
Query: 199 ggcaagtcc------aaggagggcggcgagggcaagaaggggaaaaagaaggcgaagaag 252
||||||| ||||||||||||||| ||||||||||| |||||||| ||||||
Sbjct: 212 tccaagtcctccggtaaggagggcggcgag---aagaaggggaagaagaaggccaagaag 268
Query: 253 tccgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatc 312
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 agcgtggagacctacaaaatctacatcttcaaggtgctgaagcaggtgcaccccgacatc 328
Query: 313 ggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaag 372
|||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 329 ggcatctcctccaaggccatgtccatcatgaactccttcatcaatgacatcttcgagaag 388
Query: 373 ctcgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacctcccgc 432
||||| | |||| |||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 389 ctcgccggcgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgc 448
Query: 433 gagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgtctcc 492
|||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 449 gagatccaaacctccgtgcgcctcgtcctccccggagagctcgccaagcacgccgtctcc 508
Query: 493 gagggcactaaggccgttacgaagttcacc 522
||||| || |||||||| || |||||||||
Sbjct: 509 gagggaaccaaggccgtcaccaagttcacc 538
Score = 44.1 bits (22), Expect = 0.017
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 75 gatggcacccaaggcggagaagaagccggcggccaagaagcc 116
|||||| |||||||| ||||||||||| |||| ||||||||
Sbjct: 100 gatggcgcccaaggccgagaagaagccagcggagaagaagcc 141
>gb|CN150853.1|CN150853 WOUND1_71_G11.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_71_G11_A002 5', mRNA sequence
Length = 765
Score = 470 bits (237), Expect = e-131
Identities = 352/390 (90%), Gaps = 9/390 (2%)
Strand = Plus / Plus
Query: 139 gagaaggtggagaaggctccggcggggaagaagcccaaggccgagaagcgcctcccggcg 198
||||||| ||||||||| || || || |||||||||||||||||||||||||| || ||
Sbjct: 134 gagaaggcggagaaggcgcccgctggaaagaagcccaaggccgagaagcgcctgcccgcc 193
Query: 199 ggcaagtcc------aaggagggcggcgagggcaagaaggggaaaaagaaggcgaagaag 252
||||||| ||||||||||||||| ||||||||||| |||||||| ||||||
Sbjct: 194 tccaagtcctccggtaaggagggcggcgag---aagaaggggaagaagaaggccaagaag 250
Query: 253 tccgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatc 312
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 agcgtggagacctacaaaatctacatcttcaaggtgctgaagcaggtgcaccccgacatc 310
Query: 313 ggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaag 372
|||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 311 ggcatctcctccaaggccatgtccatcatgaactccttcatcaatgacatcttcgagaag 370
Query: 373 ctcgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacctcccgc 432
||||| | |||| |||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 371 ctcgccggcgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgc 430
Query: 433 gagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgtctcc 492
|||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 431 gagatccaaacctccgtgcgcctcgtcctccccggagagctcgccaagcacgccgtctcc 490
Query: 493 gagggcactaaggccgttacgaagttcacc 522
||||| || |||||||| || |||||||||
Sbjct: 491 gagggaaccaaggccgtcaccaagttcacc 520
Score = 44.1 bits (22), Expect = 0.017
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 75 gatggcacccaaggcggagaagaagccggcggccaagaagcc 116
|||||| |||||||| ||||||||||| |||| ||||||||
Sbjct: 82 gatggcgcccaaggccgagaagaagccagcggagaagaagcc 123
>gb|CN126047.1|CN126047 RHOH1_14_H01.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_14_H01_A002 5', mRNA sequence
Length = 770
Score = 462 bits (233), Expect = e-128
Identities = 351/390 (90%), Gaps = 9/390 (2%)
Strand = Plus / Plus
Query: 139 gagaaggtggagaaggctccggcggggaagaagcccaaggccgagaagcgcctcccggcg 198
||||||| ||||||||| || || || |||||||||||||||||||||||||| || ||
Sbjct: 134 gagaaggcggagaaggcgcccgcaggaaagaagcccaaggccgagaagcgcctgcccgcc 193
Query: 199 ggcaagtcc------aaggagggcggcgagggcaagaaggggaaaaagaaggcgaagaag 252
||||||| ||||||||||||||| ||||||||||| |||||||| ||||||
Sbjct: 194 tccaagtcctccggtaaggagggcggcgag---aagaaggggaagaagaaggccaagaag 250
Query: 253 tccgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatc 312
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 agcgtggagacctacaaaatctacatcttcaaggtgctgaagcaggtgcaccccgacatc 310
Query: 313 ggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaag 372
|||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 311 ggcatctcctccaaggccatgtccatcatgaactccttcatcaatggcatcttcgagaag 370
Query: 373 ctcgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacctcccgc 432
||||| | |||| |||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 371 ctcgccggcgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgc 430
Query: 433 gagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgtctcc 492
|||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 431 gagatccaaacctccgtgcgcctcgtcctccccggagagctcgccaagcacgccgtctcc 490
Query: 493 gagggcactaaggccgttacgaagttcacc 522
||||| || |||||||| || |||||||||
Sbjct: 491 gagggaaccaaggccgtcaccaagttcacc 520
Score = 44.1 bits (22), Expect = 0.017
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 75 gatggcacccaaggcggagaagaagccggcggccaagaagcc 116
|||||| |||||||| ||||||||||| |||| ||||||||
Sbjct: 82 gatggcgcccaaggccgagaagaagccagcggagaagaagcc 123
>gb|CX608442.1|CX608442 ANR1_38_D08.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_38_D08_A002 5', mRNA sequence
Length = 635
Score = 462 bits (233), Expect = e-128
Identities = 351/390 (90%), Gaps = 9/390 (2%)
Strand = Plus / Plus
Query: 139 gagaaggtggagaaggctccggcggggaagaagcccaaggccgagaagcgcctcccggcg 198
||||||| ||||||||| || || || |||||||||||||||||||||||||| || ||
Sbjct: 126 gagaaggcggagaaggcgcccgcaggaaagaagcccaaggccgagaagcgcctgcccgcc 185
Query: 199 ggcaagtcc------aaggagggcggcgagggcaagaaggggaaaaagaaggcgaagaag 252
||||||| ||||||||||||||| ||||||||||| |||||||| ||||||
Sbjct: 186 tccaagtcctccggtaaggagggcggcgag---aagaaggggaagaagaaggccaagaag 242
Query: 253 tccgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatc 312
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 agcgtggagacctacaaaatctacatcttcaaggtgctgaagcaggtgcaccccgacatc 302
Query: 313 ggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaag 372
|||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 303 ggcatctcctccaaggccatgtccatcatggactccttcatcaatgacatcttcgagaag 362
Query: 373 ctcgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacctcccgc 432
||||| | |||| |||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 363 ctcgccggcgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgc 422
Query: 433 gagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgtctcc 492
|||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 423 gagatccaaacctccgtgcgcctcgtcctccccggagagctcgccaagcacgccgtctcc 482
Query: 493 gagggcactaaggccgttacgaagttcacc 522
||||| || |||||||| || |||||||||
Sbjct: 483 gagggaaccaaggccgtcaccaagttcacc 512
Score = 44.1 bits (22), Expect = 0.017
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 75 gatggcacccaaggcggagaagaagccggcggccaagaagcc 116
|||||| |||||||| ||||||||||| |||| ||||||||
Sbjct: 74 gatggcgcccaaggccgagaagaagccagcggagaagaagcc 115
>gb|BE592378.1|BE592378 WS1_94_A05.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 464
Score = 458 bits (231), Expect = e-127
Identities = 288/307 (93%)
Strand = Plus / Plus
Query: 225 caagaaggggaaaaagaaggcgaagaagtccgtggagacctacaagatctacatcttcaa 284
||||||||| || |||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 7 caagaagggcaagaagaaggccaagaagtcggtggagacctacaagatctacatcttcaa 66
Query: 285 ggtgctgaagcaggtgcaccccgacatcggcatctcgtccaaggccatgtccatcatgaa 344
|||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 67 ggtgctcaagcaggtgcaccccgacatcggcatctcctccaaggccatgtccatcatgaa 126
Query: 345 ctccttcatcaacgacatcttcgagaagctcgcggccgagtccgccaagctggcgcgcta 404
||||||||||||||||||||||||||||||||| | |||| |||||||||| || |||||
Sbjct: 127 ctccttcatcaacgacatcttcgagaagctcgccggcgaggccgccaagctcgcccgcta 186
Query: 405 caacaagaagcccaccatcacctcccgcgagatccagacctcggtgcgcctcgtcctccc 464
||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||
Sbjct: 187 caacaagaagcccaccatcacctccagggagatccagacgtcggtgcgcctcgtcctccc 246
Query: 465 cggcgagctcgccaagcacgccgtctccgagggcactaaggccgttacgaagttcacctc 524
||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||
Sbjct: 247 aggcgagctcgccaagcacgccgtgtccgagggcaccaaggccgttaccaagttcacctc 306
Query: 525 gtcttag 531
||||||
Sbjct: 307 atcttag 313
>gb|BF480763.1|BF480763 FM1_14_F11.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 592
Score = 454 bits (229), Expect = e-126
Identities = 353/394 (89%), Gaps = 9/394 (2%)
Strand = Plus / Plus
Query: 148 gagaaggctccggcggggaagaagcccaaggccgagaagcgcctcccggcgggcaagtcc 207
|||||||| ||||| ||||||||||||||||| |||||||| ||||| || |||||||||
Sbjct: 40 gagaaggcgccggccgggaagaagcccaaggcggagaagcgtctccccgctggcaagtcc 99
Query: 208 ------aaggagggcggcg---agggcaagaaggggaaaaagaaggcgaagaagtccgtg 258
||||||||||||| |||||||| ||| ||||||| |||||| ||||
Sbjct: 100 gccggcaaggagggcggcggcgagggcaagcggggccggaagaagggcaagaagagcgtg 159
Query: 259 gagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcatc 318
||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 160 gagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcggcatc 219
Query: 319 tcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctcgcg 378
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 tcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctcgcc 279
Query: 379 gccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacctcccgcgagatc 438
|||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 280 gccgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgcgagatc 339
Query: 439 cagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgtctccgagggc 498
|||||||| || ||||||||||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 340 cagacctccgtccgcctcgtcctccccggggagctcgcgaagcacgccgtctctgagggc 399
Query: 499 actaaggccgttacgaagttcacctcgtcttagg 532
|| |||||||| || |||||||||||||| ||||
Sbjct: 400 accaaggccgtcaccaagttcacctcgtcctagg 433
>gb|BZ341857.1|BZ341857 ic79b05.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ic79b05 5', DNA sequence
Length = 685
Score = 448 bits (226), Expect = e-124
Identities = 406/467 (86%), Gaps = 18/467 (3%)
Strand = Plus / Minus
Query: 75 gatggcacccaaggcggagaagaagccggcggccaagaagcccgcggaggaggagcccgc 134
|||||| |||||||| |||||||| || ||||| ||||||| |||||||||||||||||
Sbjct: 537 gatggcgcccaaggccgagaagaaacccgcggcgaagaagctggcggaggaggagcccgc 478
Query: 135 gacagagaaggtggagaaggctccggcggggaagaagcccaaggccgagaagcgcctccc 194
| | ||||| ||| ||||| |||||||||||||| || |||||||| || ||
Sbjct: 477 ggccgagaa---------ggcgccggccgggaagaagcccaaagcggagaagcgtctgcc 427
Query: 195 ggcgggcaagtc------caaggag---ggcggcgagggcaagaaggggaaaaagaaggc 245
|| |||||||| ||||||| ||||||||||||||| ||| |||||||
Sbjct: 426 cgctggcaagtccgccggcaaggagggcggcggcgagggcaagcggggccggaagaaggg 367
Query: 246 gaagaagtccgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccc 305
|||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 caagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcaccc 307
Query: 306 cgacatcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatctt 365
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 ggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatctt 247
Query: 366 cgagaagctcgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcac 425
|||||||||||| |||||| |||||||||| ||||| |||||||||||||||||||||||
Sbjct: 246 cgagaagctcgccgccgaggccgccaagctcgcgcggtacaacaagaagcccaccatcac 187
Query: 426 ctcccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgc 485
||||||||||||||||||||| || ||||||||||||||||| |||||||| ||||||||
Sbjct: 186 ctcccgcgagatccagacctccgtccgcctcgtcctccccggggagctcgcgaagcacgc 127
Query: 486 cgtctccgagggcactaaggccgttacgaagttcacctcgtcttagg 532
|||||| |||||||| |||||||| || |||||||||||||| ||||
Sbjct: 126 cgtctctgagggcaccaaggccgtcaccaagttcacctcgtcctagg 80
>gb|CW155043.1|CW155043 104_557_11145924_116_36362_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11145924, DNA
sequence
Length = 743
Score = 448 bits (226), Expect = e-124
Identities = 406/467 (86%), Gaps = 18/467 (3%)
Strand = Plus / Plus
Query: 75 gatggcacccaaggcggagaagaagccggcggccaagaagcccgcggaggaggagcccgc 134
|||||| |||||||| |||||||| || ||||| ||||||| |||||||||||||||||
Sbjct: 96 gatggcgcccaaggccgagaagaaacccgcggcgaagaagctggcggaggaggagcccgc 155
Query: 135 gacagagaaggtggagaaggctccggcggggaagaagcccaaggccgagaagcgcctccc 194
| | ||||| ||| ||||| |||||||||||||| || |||||||| || ||
Sbjct: 156 ggccgagaa---------ggcgccggccgggaagaagcccaaagcggagaagcgtctgcc 206
Query: 195 ggcgggcaagtc------caaggag---ggcggcgagggcaagaaggggaaaaagaaggc 245
|| |||||||| ||||||| ||||||||||||||| ||| |||||||
Sbjct: 207 cgctggcaagtccgccggcaaggagggcggcggcgagggcaagcggggccggaagaaggg 266
Query: 246 gaagaagtccgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccc 305
|||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 caagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcaccc 326
Query: 306 cgacatcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatctt 365
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatctt 386
Query: 366 cgagaagctcgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcac 425
|||||||||||| |||||| |||||||||| ||||| |||||||||||||||||||||||
Sbjct: 387 cgagaagctcgccgccgaggccgccaagctcgcgcggtacaacaagaagcccaccatcac 446
Query: 426 ctcccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgc 485
||||||||||||||||||||| || ||||||||||||||||| |||||||| ||||||||
Sbjct: 447 ctcccgcgagatccagacctccgtccgcctcgtcctccccggggagctcgcgaagcacgc 506
Query: 486 cgtctccgagggcactaaggccgttacgaagttcacctcgtcttagg 532
|||||| |||||||| |||||||| || |||||||||||||| ||||
Sbjct: 507 cgtctctgagggcaccaaggccgtcaccaagttcacctcgtcctagg 553
>gb|BE593453.1|BE593453 WS1_98_A10.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 487
Score = 448 bits (226), Expect = e-124
Identities = 329/363 (90%), Gaps = 9/363 (2%)
Strand = Plus / Plus
Query: 139 gagaaggtggagaaggctccggcggggaagaagcccaaggccgagaagcgcctcccggcg 198
||||||| ||||||||| || || || |||||||||||||||||||||||||| || ||
Sbjct: 128 gagaaggcggagaaggcgcccgcaggaaagaagcccaaggccgagaagcgcctgcccgcc 187
Query: 199 ggcaagtcc------aaggagggcggcgagggcaagaaggggaaaaagaaggcgaagaag 252
||||||| ||||||||||||||| ||||||||||| |||||||| ||||||
Sbjct: 188 tccaagtcctccggtaaggagggcggcgag---aagaaggggaagaagaaggccaagaag 244
Query: 253 tccgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatc 312
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 agcgtggagacctacaaaatctacatcttcaaggtgctgaagcaggtgcaccccgacatc 304
Query: 313 ggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaag 372
|||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 305 ggcatctcctccaaggccatgtccatcatgaactccttcatcaatgacatcttcgagaag 364
Query: 373 ctcgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcacctcccgc 432
||||| | |||| |||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 365 ctcgccggcgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgc 424
Query: 433 gagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgtctcc 492
|||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 425 gagatccaaacctccgtgcgcctcgtcctccccggagagctcgccaagcacgccgtctcc 484
Query: 493 gag 495
|||
Sbjct: 485 gag 487
Score = 44.1 bits (22), Expect = 0.017
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 75 gatggcacccaaggcggagaagaagccggcggccaagaagcc 116
|||||| |||||||| ||||||||||| |||| ||||||||
Sbjct: 76 gatggcgcccaaggccgagaagaagccagcggagaagaagcc 117
>gb|CX606979.1|CX606979 ANR1_6_B05.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_B05_A002 3', mRNA sequence
Length = 665
Score = 448 bits (226), Expect = e-124
Identities = 406/467 (86%), Gaps = 18/467 (3%)
Strand = Plus / Plus
Query: 75 gatggcacccaaggcggagaagaagccggcggccaagaagcccgcggaggaggagcccgc 134
|||||| |||||||| |||||||| || ||||| ||||||| |||||||||||||||||
Sbjct: 53 gatggcgcccaaggccgagaagaaacccgcggcgaagaagctggcggaggaggagcccgc 112
Query: 135 gacagagaaggtggagaaggctccggcggggaagaagcccaaggccgagaagcgcctccc 194
| | ||||| ||| ||||| |||||||||||||| || |||||||| || ||
Sbjct: 113 ggccgagaa---------ggcgccggccgggaagaagcccaaagcggagaagcgtctgcc 163
Query: 195 ggcgggcaagtc------caaggag---ggcggcgagggcaagaaggggaaaaagaaggc 245
|| |||||||| ||||||| ||||||||||||||| ||| |||||||
Sbjct: 164 cgctggcaagtccgccggcaaggagggcggcggcgagggcaagcggggccggaagaaggg 223
Query: 246 gaagaagtccgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccc 305
|||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 caagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcaccc 283
Query: 306 cgacatcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatctt 365
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatctt 343
Query: 366 cgagaagctcgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcac 425
|||||||||||| |||||| |||||||||| ||||| |||||||||||||||||||||||
Sbjct: 344 cgagaagctcgccgccgaggccgccaagctcgcgcggtacaacaagaagcccaccatcac 403
Query: 426 ctcccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgc 485
||||||||||||||||||||| || ||||||||||||||||| |||||||| ||||||||
Sbjct: 404 ctcccgcgagatccagacctccgtccgcctcgtcctccccggggagctcgcgaagcacgc 463
Query: 486 cgtctccgagggcactaaggccgttacgaagttcacctcgtcttagg 532
|||||| |||||||| |||||||| || |||||||||||||| ||||
Sbjct: 464 cgtctctgagggcaccaaggccgtcaccaagttcacctcgtcctagg 510
>gb|CX607063.1|CX607063 ANR1_6_B05.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_B05_A002 5', mRNA sequence
Length = 702
Score = 448 bits (226), Expect = e-124
Identities = 406/467 (86%), Gaps = 18/467 (3%)
Strand = Plus / Plus
Query: 75 gatggcacccaaggcggagaagaagccggcggccaagaagcccgcggaggaggagcccgc 134
|||||| |||||||| |||||||| || ||||| ||||||| |||||||||||||||||
Sbjct: 72 gatggcgcccaaggccgagaagaaacccgcggcgaagaagctggcggaggaggagcccgc 131
Query: 135 gacagagaaggtggagaaggctccggcggggaagaagcccaaggccgagaagcgcctccc 194
| | ||||| ||| ||||| |||||||||||||| || |||||||| || ||
Sbjct: 132 ggccgagaa---------ggcgccggccgggaagaagcccaaagcggagaagcgtctgcc 182
Query: 195 ggcgggcaagtc------caaggag---ggcggcgagggcaagaaggggaaaaagaaggc 245
|| |||||||| ||||||| ||||||||||||||| ||| |||||||
Sbjct: 183 cgctggcaagtccgccggcaaggagggcggcggcgagggcaagcggggccggaagaaggg 242
Query: 246 gaagaagtccgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccc 305
|||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 caagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcaccc 302
Query: 306 cgacatcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatctt 365
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatctt 362
Query: 366 cgagaagctcgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcac 425
|||||||||||| |||||| |||||||||| ||||| |||||||||||||||||||||||
Sbjct: 363 cgagaagctcgccgccgaggccgccaagctcgcgcggtacaacaagaagcccaccatcac 422
Query: 426 ctcccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgc 485
||||||||||||||||||||| || ||||||||||||||||| |||||||| ||||||||
Sbjct: 423 ctcccgcgagatccagacctccgtccgcctcgtcctccccggggagctcgcgaagcacgc 482
Query: 486 cgtctccgagggcactaaggccgttacgaagttcacctcgtcttagg 532
|||||| |||||||| |||||||| || |||||||||||||| ||||
Sbjct: 483 cgtctctgagggcaccaaggccgtcaccaagttcacctcgtcctagg 529
>gb|CX610420.1|CX610420 ANR1_18_D02.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_18_D02_A002 5', mRNA sequence
Length = 711
Score = 448 bits (226), Expect = e-124
Identities = 406/467 (86%), Gaps = 18/467 (3%)
Strand = Plus / Plus
Query: 75 gatggcacccaaggcggagaagaagccggcggccaagaagcccgcggaggaggagcccgc 134
|||||| |||||||| |||||||| || ||||| ||||||| |||||||||||||||||
Sbjct: 71 gatggcgcccaaggccgagaagaaacccgcggcgaagaagctggcggaggaggagcccgc 130
Query: 135 gacagagaaggtggagaaggctccggcggggaagaagcccaaggccgagaagcgcctccc 194
| | ||||| ||| ||||| |||||||||||||| || |||||||| || ||
Sbjct: 131 ggccgagaa---------ggcgccggccgggaagaagcccaaagcggagaagcgtctgcc 181
Query: 195 ggcgggcaagtc------caaggag---ggcggcgagggcaagaaggggaaaaagaaggc 245
|| |||||||| ||||||| ||||||||||||||| ||| |||||||
Sbjct: 182 cgctggcaagtccgccggcaaggagggcggcggcgagggcaagcggggccggaagaaggg 241
Query: 246 gaagaagtccgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccc 305
|||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 caagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcaccc 301
Query: 306 cgacatcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatctt 365
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatctt 361
Query: 366 cgagaagctcgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcac 425
|||||||||||| |||||| |||||||||| ||||| |||||||||||||||||||||||
Sbjct: 362 cgagaagctcgccgccgaggccgccaagctcgcgcggtacaacaagaagcccaccatcac 421
Query: 426 ctcccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgc 485
||||||||||||||||||||| || ||||||||||||||||| |||||||| ||||||||
Sbjct: 422 ctcccgcgagatccagacctccgtccgcctcgtcctccccggggagctcgcgaagcacgc 481
Query: 486 cgtctccgagggcactaaggccgttacgaagttcacctcgtcttagg 532
|||||| |||||||| |||||||| || |||||||||||||| ||||
Sbjct: 482 cgtctctgagggcaccaaggccgtcaccaagttcacctcgtcctagg 528
>gb|BF481909.1|BF481909 FM1_22_H04.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 506
Score = 446 bits (225), Expect = e-123
Identities = 279/297 (93%)
Strand = Plus / Plus
Query: 226 aagaaggggaaaaagaaggcgaagaagtccgtggagacctacaagatctacatcttcaag 285
||||||||||| |||||||| |||||| ||||||||||||||| |||||||||||||||
Sbjct: 11 aagaaggggaagaagaaggccaagaagagcgtggagacctacaaaatctacatcttcaag 70
Query: 286 gtgctgaagcaggtgcaccccgacatcggcatctcgtccaaggccatgtccatcatgaac 345
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 71 gtgctgaagcaggtgcaccccgacatcggcatctcctccaaggccatgtccatcatgaac 130
Query: 346 tccttcatcaacgacatcttcgagaagctcgcggccgagtccgccaagctggcgcgctac 405
|||||||||||||||||||||||||||||||| | |||| |||||||||| ||||| |||
Sbjct: 131 tccttcatcaacgacatcttcgagaagctcgccggcgaggccgccaagctcgcgcggtac 190
Query: 406 aacaagaagcccaccatcacctcccgcgagatccagacctcggtgcgcctcgtcctcccc 465
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 191 aacaagaagcccaccatcacctcccgcgagatccaaacctccgtgcgcctcgtcctcccc 250
Query: 466 ggcgagctcgccaagcacgccgtctccgagggcactaaggccgttacgaagttcacc 522
|| ||||||||||||||||||||||||||||| || |||||||| || |||||||||
Sbjct: 251 ggagagctcgccaagcacgccgtctccgagggaaccaaggccgtcaccaagttcacc 307
>gb|BF656458.1|BF656458 FM1_50_B08.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 556
Score = 446 bits (225), Expect = e-123
Identities = 279/297 (93%)
Strand = Plus / Plus
Query: 226 aagaaggggaaaaagaaggcgaagaagtccgtggagacctacaagatctacatcttcaag 285
||||||||||| |||||||| |||||| ||||||||||||||| |||||||||||||||
Sbjct: 8 aagaaggggaagaagaaggccaagaagagcgtggagacctacaaaatctacatcttcaag 67
Query: 286 gtgctgaagcaggtgcaccccgacatcggcatctcgtccaaggccatgtccatcatgaac 345
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 68 gtgctgaagcaggtgcaccccgacatcggcatctcctccaaggccatgtccatcatgaac 127
Query: 346 tccttcatcaacgacatcttcgagaagctcgcggccgagtccgccaagctggcgcgctac 405
|||||||||||||||||||||||||||||||| | |||| |||||||||| ||||| |||
Sbjct: 128 tccttcatcaacgacatcttcgagaagctcgccggcgaggccgccaagctcgcgcggtac 187
Query: 406 aacaagaagcccaccatcacctcccgcgagatccagacctcggtgcgcctcgtcctcccc 465
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 188 aacaagaagcccaccatcacctcccgcgagatccaaacctccgtgcgcctcgtcctcccc 247
Query: 466 ggcgagctcgccaagcacgccgtctccgagggcactaaggccgttacgaagttcacc 522
|| ||||||||||||||||||||||||||||| || |||||||| || |||||||||
Sbjct: 248 ggagagctcgccaagcacgccgtctccgagggaaccaaggccgtcaccaagttcacc 304
>gb|CW297850.1|CW297850 104_780_11462260_116_35647_012 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11462260, DNA
sequence
Length = 662
Score = 444 bits (224), Expect = e-123
Identities = 333/370 (90%), Gaps = 12/370 (3%)
Strand = Plus / Plus
Query: 171 gcccaaggccgagaagcgcctcccggcgggcaagtc---------caaggagggcggcga 221
||||||||| |||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 1 gcccaaggcggagaagcggctcccggcgggcaagtcgtccgccggcaaggagggcggcga 60
Query: 222 gggcaagaaggggaaaaagaaggcgaagaagtccgtggagacctacaagatctacatctt 281
| |||||||||| ||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 61 g---aagaaggggaggaagaagggcaagaagagcgtggagacctacaagatctacatctt 117
Query: 282 caaggtgctgaagcaggtgcaccccgacatcggcatctcgtccaaggccatgtccatcat 341
|||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 118 caaggtcctgaagcaggtgcacccggacatcggcatctcctccaaggccatgtccatcat 177
Query: 342 gaactccttcatcaacgacatcttcgagaagctcgcggccgagtccgccaagctggcgcg 401
||||||||||||||||||||||||||||||||| || || |||||||||||||| || ||
Sbjct: 178 gaactccttcatcaacgacatcttcgagaagctggccgcggagtccgccaagctcgcccg 237
Query: 402 ctacaacaagaagcccaccatcacctcccgcgagatccagacctcggtgcgcctcgtcct 461
||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||
Sbjct: 238 ctacaacaagaagcccaccattacctcccgcgagatccagacctccgtccgcctcgtcct 297
Query: 462 ccccggcgagctcgccaagcacgccgtctccgagggcactaaggccgttacgaagttcac 521
|||||| ||||||||||||||||||||||||||||| || |||||||| || ||||||||
Sbjct: 298 ccccggggagctcgccaagcacgccgtctccgagggtaccaaggccgtcaccaagttcac 357
Query: 522 ctcgtcttag 531
||| ||||||
Sbjct: 358 ctcctcttag 367
>gb|CW128767.1|CW128767 104_510_11114194_148_34755_039 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11114194, DNA
sequence
Length = 652
Score = 442 bits (223), Expect = e-122
Identities = 350/392 (89%), Gaps = 9/392 (2%)
Strand = Plus / Minus
Query: 147 ggagaaggctccggcggggaagaagcccaaggccgagaagcgcctcccggcgggcaagtc 206
||||||| | || |||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 579 ggagaagccccccgcggggaagaagcccaaggcggagaagcgtctcccggcgggcaagtc 520
Query: 207 c------aaggagggcggcgagggcaagaaggggaaaaagaaggcgaagaagtccgtgga 260
| ||||||||||||||| |||| ||| ||||||| |||||| ||||||
Sbjct: 519 cgccagcaaggagggcggcgag---aagaggggtcggaagaagggcaagaagagcgtgga 463
Query: 261 gacctacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcatctc 320
||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 462 gacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcggcatctc 403
Query: 321 gtccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctcgcggc 380
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 402 ctccaaggccatgtccatcatgaactcgttcatcaacgacatcttcgagaagctcgccgg 343
Query: 381 cgagtccgccaagctggcgcgctacaacaagaagcccaccatcacctcccgcgagatcca 440
|||| |||||||||| || |||||||||||||||||||||||||| || || ||||||||
Sbjct: 342 cgaggccgccaagctcgcccgctacaacaagaagcccaccatcacttctcgggagatcca 283
Query: 441 gacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgtctccgagggcac 500
|||||| || ||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 282 gacctccgtccgcctcgtcctccccggggagctcgccaagcacgccgtctctgagggcac 223
Query: 501 taaggccgttacgaagttcacctcgtcttagg 532
|||||||| || |||||||||||||||||||
Sbjct: 222 caaggccgtcaccaagttcacctcgtcttagg 191
Score = 40.1 bits (20), Expect = 0.26
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 75 gatggcacccaaggcggagaagaagccggcggccaagaagcccg 118
|||||| |||||||||||||||| | ||| || ||||||||||
Sbjct: 647 gatggcgcccaaggcggagaagagccgggcagcgaagaagcccg 604
>gb|BG052252.1|BG052252 RHIZ2_12_B05.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 464
Score = 442 bits (223), Expect = e-122
Identities = 300/325 (92%), Gaps = 3/325 (0%)
Strand = Plus / Plus
Query: 207 caaggagggcggcgagggcaagaaggggaaaaagaaggcgaagaagtccgtggagaccta 266
|||||||||||||||| |||||||||| ||||||| ||||||| ||||||||||||
Sbjct: 39 caaggagggcggcgag---aagaaggggaggaagaaggggaagaagagcgtggagaccta 95
Query: 267 caagatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcatctcgtccaa 326
||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||
Sbjct: 96 caagatctacatcttcaaggtcctgaagcaggtgcacccggacatcggcatctcctccaa 155
Query: 327 ggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctcgcggccgagtc 386
|||||||||||||||||||||||||||||||||||||||||||||||| || || |||||
Sbjct: 156 ggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctggccgcggagtc 215
Query: 387 cgccaagctggcgcgctacaacaagaagcccaccatcacctcccgcgagatccagacctc 446
||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 216 cgccaagctcgcccgctacaacaagaagcccaccattacctcccgcgagatccagacctc 275
Query: 447 ggtgcgcctcgtcctccccggcgagctcgccaagcacgccgtctccgagggcactaaggc 506
|| ||||||||||||||||| ||||||||||||||||||||||||||||| || |||||
Sbjct: 276 cgtccgcctcgtcctccccggggagctcgccaagcacgccgtctccgagggtaccaaggc 335
Query: 507 cgttacgaagttcacctcgtcttag 531
||| || ||||||||||| ||||||
Sbjct: 336 cgtcaccaagttcacctcctcttag 360
>gb|BG488106.1|BG488106 RHIZ2_63_D10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 514
Score = 442 bits (223), Expect = e-122
Identities = 350/392 (89%), Gaps = 9/392 (2%)
Strand = Plus / Plus
Query: 147 ggagaaggctccggcggggaagaagcccaaggccgagaagcgcctcccggcgggcaagtc 206
||||||||| || |||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 23 ggagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccggcgggcaagtc 82
Query: 207 c------aaggagggcggcgagggcaagaaggggaaaaagaaggcgaagaagtccgtgga 260
| ||||||||||||||| |||| ||| ||||||| |||||| ||||||
Sbjct: 83 cgccagcaaggagggcggcgag---aagaggggtcggaagaagggcaagaagagcgtgga 139
Query: 261 gacctacaagatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggcatctc 320
||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 140 gacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcggtatctc 199
Query: 321 gtccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctcgcggc 380
||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 200 ctccaaggccatgtccatcatgaactccttcatcaatgacatcttcgagaagctcgccgg 259
Query: 381 cgagtccgccaagctggcgcgctacaacaagaagcccaccatcacctcccgcgagatcca 440
|||| |||||||||| || |||||||||||||||||||||||||| || || ||||||||
Sbjct: 260 cgaggccgccaagctcgcccgctacaacaagaagcccaccatcacttctcgggagatcca 319
Query: 441 gacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgtctccgagggcac 500
|||||| || ||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 320 gacctccgtccgcctcgtcctccccggggagctcgccaagcacgccgtctctgagggcac 379
Query: 501 taaggccgttacgaagttcacctcgtcttagg 532
|||||||| || |||||||||||||||||||
Sbjct: 380 caaggccgtcaccaagttcacctcgtcttagg 411
>gb|CF071274.1|CF071274 FE1_16_D02.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_16_D02_A002 5', mRNA sequence
Length = 551
Score = 442 bits (223), Expect = e-122
Identities = 317/348 (91%), Gaps = 9/348 (2%)
Strand = Plus / Minus
Query: 181 gagaagcgcctcccggcgggcaagtcc------aaggagggcggcgagggcaagaagggg 234
|||||||| |||||| ||||||||||| ||||| ||||||||| ||||||||
Sbjct: 551 gagaagcggctcccgtcgggcaagtccgcgggcaaggaaggcggcgag---aagaaggga 495
Query: 235 aaaaagaaggcgaagaagtccgtggagacctacaagatctacatcttcaaggtgctgaag 294
|| ||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||
Sbjct: 494 aagaagaaggcgaagaagtcggtggagacgtacaagatctacatcttcaaggtgccgaag 435
Query: 295 caggtgcaccccgacatcggcatctcgtccaaggccatgtccatcatgaactccttcatc 354
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 caggtgcacccggacatcggcatctcgtccaaggccatgtccatcatgaactccttcatc 375
Query: 355 aacgacatcttcgagaagctcgcggccgagtccgccaagctggcgcgctacaacaagaag 414
|||||||||||||||||||| ||||| ||| | |||||||||||||| ||||||||||||
Sbjct: 374 aacgacatcttcgagaagctggcggcggaggcggccaagctggcgcggtacaacaagaag 315
Query: 415 cccaccatcacctcccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctc 474
||||||||||| ||||| |||||||||||||| || ||||||||||||||||| ||||||
Sbjct: 314 cccaccatcacgtcccgggagatccagacctccgtccgcctcgtcctccccggtgagctc 255
Query: 475 gccaagcacgccgtctccgagggcactaaggccgttacgaagttcacc 522
|||||||||||||||||||||||||| |||||||| || |||||||||
Sbjct: 254 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacc 207
>gb|CW410848.1|CW410848 fsbb001f105m09k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f105m09, DNA
sequence
Length = 598
Score = 440 bits (222), Expect = e-122
Identities = 405/467 (86%), Gaps = 18/467 (3%)
Strand = Plus / Plus
Query: 75 gatggcacccaaggcggagaagaagccggcggccaagaagcccgcggaggaggagcccgc 134
|||||| |||||||| |||||||| || ||||| ||||||| |||||||||||||||||
Sbjct: 71 gatggcgcccaaggccgagaagaaacccgcggcgaagaagctggcggaggaggagcccgc 130
Query: 135 gacagagaaggtggagaaggctccggcggggaagaagcccaaggccgagaagcgcctccc 194
| | ||||| ||| ||||| |||||||||||||| || |||||||| || ||
Sbjct: 131 ggccgagaa---------ggcgccggccgggaagaagcccaaagcggagaagcgtctgcc 181
Query: 195 ggcgggcaagtc------caaggag---ggcggcgagggcaagaaggggaaaaagaaggc 245
|| |||||||| ||||||| ||||||||||||||| ||| |||||||
Sbjct: 182 cgctggcaagtccgccggcaaggagggcggcggcgagggcaagcggggccggaagaaggg 241
Query: 246 gaagaagtccgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcaccc 305
|||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 caagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcaccc 301
Query: 306 cgacatcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatctt 365
|||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 302 ggacatcggcatctcctccaagggcatgtccatcatgaactccttcatcaacgacatctt 361
Query: 366 cgagaagctcgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcac 425
|||||||||||| |||||| |||||||||| ||||| |||||||||||||||||||||||
Sbjct: 362 cgagaagctcgccgccgaggccgccaagctcgcgcggtacaacaagaagcccaccatcac 421
Query: 426 ctcccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgc 485
||||||||||||||||||||| || ||||||||||||||||| |||||||| ||||||||
Sbjct: 422 ctcccgcgagatccagacctccgtccgcctcgtcctccccggggagctcgcgaagcacgc 481
Query: 486 cgtctccgagggcactaaggccgttacgaagttcacctcgtcttagg 532
|||||| |||||||| |||||||| || |||||||||||||| ||||
Sbjct: 482 cgtctctgagggcaccaaggccgtcaccaagttcacctcgtcctagg 528
>gb|CD213618.1|CD213618 HS1_52_G12.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_52_G12_A012 3', mRNA sequence
Length = 611
Score = 440 bits (222), Expect = e-122
Identities = 340/379 (89%), Gaps = 9/379 (2%)
Strand = Plus / Plus
Query: 163 gggaagaagcccaaggccgagaagcgcctcccggcgggcaagtcc------aaggagggc 216
||||||||||||||||| |||||||| ||||| || ||||||||| |||||||||
Sbjct: 2 gggaagaagcccaaggcggagaagcgtctccccgctggcaagtccgccggcaaggagggc 61
Query: 217 ggcg---agggcaagaaggggaaaaagaaggcgaagaagtccgtggagacctacaagatc 273
|||| |||||||| ||| ||||||| |||||| ||||||||| |||||||||
Sbjct: 62 ggcggcgagggcaagcggggccggaagaagggcaagaagagcgtggagacgtacaagatc 121
Query: 274 tacatcttcaaggtgctgaagcaggtgcaccccgacatcggcatctcgtccaaggccatg 333
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 122 tacatcttcaaggtgctgaagcaggtgcacccggacatcggcatctcctccaaggccatg 181
Query: 334 tccatcatgaactccttcatcaacgacatcttcgagaagctcgcggccgagtccgccaag 393
|||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 182 tccatcatgaactccttcatcaacgacatcttcgagaagctcgccgccgaggccgccaag 241
Query: 394 ctggcgcgctacaacaagaagcccaccatcacctcccgcgagatccagacctcggtgcgc 453
|| ||||| |||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 242 ctcgcgcggtacaacaagaagcccaccatcacctcccgcgagatccagacctccgtccgc 301
Query: 454 ctcgtcctccccggcgagctcgccaagcacgccgtctccgagggcactaaggccgttacg 513
|||||||||||||| | ||||||||||||||||||||| |||||||| |||||||| ||
Sbjct: 302 ctcgtcctccccggggggctcgccaagcacgccgtctctgagggcaccaaggccgtcacc 361
Query: 514 aagttcacctcgtcttagg 532
|||||||||||||| ||||
Sbjct: 362 aagttcacctcgtcctagg 380
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 248,968
Number of Sequences: 832831
Number of extensions: 248968
Number of successful extensions: 78238
Number of sequences better than 0.5: 161
Number of HSP's better than 0.5 without gapping: 161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77604
Number of HSP's gapped (non-prelim): 553
length of query: 685
length of database: 491,359,669
effective HSP length: 19
effective length of query: 666
effective length of database: 475,535,880
effective search space: 316706896080
effective search space used: 316706896080
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)