BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.287
(857 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD213713.1|CD213713 HS1_52_G12.g1_A012 Heat-shocked seed... 751 0.0
gb|BZ341857.1|BZ341857 ic79b05.g1 WGS-SbicolorF (JM107 adap... 712 0.0
gb|CW155043.1|CW155043 104_557_11145924_116_36362_042 Sorgh... 712 0.0
gb|CX606979.1|CX606979 ANR1_6_B05.b1_A002 Anaerobic roots S... 712 0.0
gb|CX607063.1|CX607063 ANR1_6_B05.g1_A002 Anaerobic roots S... 712 0.0
gb|CX610420.1|CX610420 ANR1_18_D02.g1_A002 Anaerobic roots ... 712 0.0
gb|CW410848.1|CW410848 fsbb001f105m09k0 Sorghum methylation... 704 0.0
gb|CD462726.1|CD462726 ETH1_39_B03.g1_A002 Ethylene-treated... 698 0.0
gb|BF480763.1|BF480763 FM1_14_F11.g1_A003 Floral-Induced Me... 684 0.0
gb|BF480894.1|BF480894 FM1_14_F11.b1_A003 Floral-Induced Me... 674 0.0
gb|CL152064.1|CL152064 104_335_10779694_116_31364_094 Sorgh... 652 0.0
gb|CD213618.1|CD213618 HS1_52_G12.b1_A012 Heat-shocked seed... 618 e-175
gb|BG240440.1|BG240440 OV1_30_A12.b1_A002 Ovary 1 (OV1) Sor... 593 e-167
gb|BG488416.1|BG488416 RHIZ2_63_D10.b1_A003 Rhizome2 (RHIZ2... 593 e-167
gb|CW319235.1|CW319235 104_811_11474377_148_35884_003 Sorgh... 585 e-165
gb|CW417908.1|CW417908 fsbb001f121c05f0 Sorghum methylation... 585 e-165
gb|BE355360.1|BE355360 DG1_114_A03.b1_A002 Dark Grown 1 (DG... 585 e-165
gb|CW191309.1|CW191309 104_613_11178426_116_36942_075 Sorgh... 583 e-164
gb|BE917707.1|BE917707 OV1_6_B04.b1_A002 Ovary 1 (OV1) Sorg... 579 e-163
gb|CW410847.1|CW410847 fsbb001f105m09f0 Sorghum methylation... 569 e-160
gb|CW128767.1|CW128767 104_510_11114194_148_34755_039 Sorgh... 561 e-158
gb|CW188377.1|CW188377 104_608_11172997_148_36734_061 Sorgh... 561 e-158
gb|BF704683.1|BF704683 FM1_50_B08.b1_A003 Floral-Induced Me... 561 e-158
gb|CW155044.1|CW155044 104_557_11145924_148_36361_042 Sorgh... 557 e-157
gb|CW183462.1|CW183462 104_599_11164629_148_36672_089 Sorgh... 555 e-156
gb|CD464058.1|CD464058 ETH1_48_H05.b1_A002 Ethylene-treated... 555 e-156
gb|BG488106.1|BG488106 RHIZ2_63_D10.g1_A003 Rhizome2 (RHIZ2... 553 e-156
gb|BE917630.1|BE917630 OV1_6_B04.g1_A002 Ovary 1 (OV1) Sorg... 551 e-155
gb|AW680031.1|AW680031 WS1_34_A02.g1_A002 Water-stressed 1 ... 539 e-151
gb|BE355526.1|BE355526 DG1_114_A03.g1_A002 Dark Grown 1 (DG... 539 e-151
gb|BG410872.1|BG410872 EM1_27_A01.g1_A002 Embryo 1 (EM1) So... 539 e-151
gb|AW564395.1|AW564395 LG1_292_F12.b1_A002 Light Grown 1 (L... 537 e-151
gb|BE593143.1|BE593143 WS1_98_A10.g1_A002 Water-stressed 1 ... 537 e-151
gb|CD431873.1|CD431873 ETH1_11_A02.g1_A002 Ethylene-treated... 537 e-151
gb|CN150853.1|CN150853 WOUND1_71_G11.g1_A002 Wounded leaves... 537 e-151
gb|AW745446.1|AW745446 WS1_34_A02.b1_A002 Water-stressed 1 ... 535 e-150
gb|BG411209.1|BG411209 EM1_27_A01.b1_A002 Embryo 1 (EM1) So... 535 e-150
gb|CW129063.1|CW129063 104_511_11114353_148_34760_015 Sorgh... 529 e-148
gb|CN126047.1|CN126047 RHOH1_14_H01.g1_A002 Acid- and alkal... 529 e-148
gb|CX608442.1|CX608442 ANR1_38_D08.g1_A002 Anaerobic roots ... 529 e-148
gb|BE599532.1|BE599532 PI1_88_F07.b1_A002 Pathogen induced ... 505 e-141
gb|CW297850.1|CW297850 104_780_11462260_116_35647_012 Sorgh... 504 e-141
gb|BG102543.1|BG102543 RHIZ2_34_D04.g1_A003 Rhizome2 (RHIZ2... 504 e-141
gb|AI724175.1|AI724175 RHIZ1_8_A04.y2_A001 Rhizome1 (RHIZ1)... 496 e-138
gb|BE593453.1|BE593453 WS1_98_A10.b1_A002 Water-stressed 1 ... 492 e-137
gb|BE355445.1|BE355445 DG1_114_A03.b2_A002 Dark Grown 1 (DG... 476 e-132
gb|BF481909.1|BF481909 FM1_22_H04.g1_A003 Floral-Induced Me... 476 e-132
gb|BF656458.1|BF656458 FM1_50_B08.g1_A003 Floral-Induced Me... 476 e-132
gb|BG052252.1|BG052252 RHIZ2_12_B05.g1_A003 Rhizome2 (RHIZ2... 474 e-132
gb|CW182557.1|CW182557 104_598_11164141_116_36663_061 Sorgh... 466 e-129
gb|AI723845.1|AI723845 RHIZ1_28_B06.y1_A001 Rhizome1 (RHIZ1... 466 e-129
gb|CN125957.1|CN125957 RHOH1_14_H01.b1_A002 Acid- and alkal... 464 e-129
gb|CW306661.1|CW306661 104_792_11466961_148_35713_007 Sorgh... 462 e-128
gb|CF431776.1|CF431776 NIT1_9_B03.b1_A002 Nitrogen-deficien... 462 e-128
gb|BF482021.1|BF482021 FM1_22_H04.b1_A003 Floral-Induced Me... 458 e-127
gb|CF071535.1|CF071535 FE1_17_C03.b1_A002 Iron-deficient se... 444 e-123
gb|CF071274.1|CF071274 FE1_16_D02.g1_A002 Iron-deficient se... 442 e-122
gb|BE357369.1|BE357369 DG1_148_A05.g1_A002 Dark Grown 1 (DG... 440 e-122
gb|CD432572.1|CD432572 ETH1_30_E04.g1_A002 Ethylene-treated... 440 e-122
gb|CW361905.1|CW361905 fsbb001f030l13f0 Sorghum methylation... 438 e-121
gb|BG049237.1|BG049237 OV1_17_D01.g1_A002 Ovary 1 (OV1) Sor... 436 e-120
gb|CW317075.1|CW317075 104_808_11473223_116_35851_084 Sorgh... 432 e-119
gb|CX607748.1|CX607748 ANR1_30_B07.g1_A002 Anaerobic roots ... 432 e-119
gb|BE592378.1|BE592378 WS1_94_A05.g1_A002 Water-stressed 1 ... 430 e-119
gb|CF072752.1|CF072752 FE1_25_E07.g1_A002 Iron-deficient se... 430 e-119
gb|BE592516.1|BE592516 WS1_94_A05.b1_A002 Water-stressed 1 ... 424 e-117
gb|BE599367.1|BE599367 PI1_88_F07.g1_A002 Pathogen induced ... 424 e-117
gb|AI724242.1|AI724242 RHIZ1_8_B12.y2_A001 Rhizome1 (RHIZ1)... 422 e-116
gb|CW112587.1|CW112587 104_486_11104970_116_34548_007 Sorgh... 406 e-111
gb|CF484983.1|CF484983 POL1_28_F02.g1_A002 Pollen Sorghum b... 404 e-111
gb|CX607662.1|CX607662 ANR1_30_B07.b1_A002 Anaerobic roots ... 400 e-110
gb|CW105327.1|CW105327 104_474_11012845_116_34450_053 Sorgh... 396 e-108
gb|CW394994.1|CW394994 fsbb001f082n15f0 Sorghum methylation... 392 e-107
gb|CW156116.1|CW156116 104_558_11146509_148_36368_081 Sorgh... 391 e-107
gb|CF431835.1|CF431835 NIT1_9_B03.g1_A002 Nitrogen-deficien... 389 e-106
gb|BG048803.1|BG048803 OV1_23_C04.b1_A002 Ovary 1 (OV1) Sor... 381 e-104
gb|BG049096.1|BG049096 OV1_23_C04.g1_A002 Ovary 1 (OV1) Sor... 377 e-102
gb|CW463246.1|CW463246 fsbb001f211m02f0 Sorghum methylation... 373 e-101
gb|AW286565.1|AW286565 LG1_334_E01.g1_A002 Light Grown 1 (L... 365 4e-099
gb|CN150769.1|CN150769 WOUND1_71_G11.b1_A002 Wounded leaves... 351 7e-095
gb|CF772707.1|CF772707 DSBF1_38_D05.g1_A010 Drought-stresse... 349 3e-094
gb|CW070741.1|CW070741 104_322_10590964_114_30544 Sorghum m... 345 4e-093
gb|BG240054.1|BG240054 OV1_17_D01.b1_A002 Ovary 1 (OV1) Sor... 343 2e-092
gb|CF074009.1|CF074009 FE1_9_D12.g1_A002 Iron-deficient see... 337 1e-090
gb|BF704815.1|BF704815 FM1_51_H04.b1_A003 Floral-Induced Me... 333 2e-089
gb|BG558204.1|BG558204 RHIZ2_64_D04.b1_A003 Rhizome2 (RHIZ2... 331 6e-089
gb|CW182558.1|CW182558 104_598_11164141_148_36664_061 Sorgh... 319 2e-085
gb|CW088567.1|CW088567 104_433_10948227_116_32575_006 Sorgh... 315 4e-084
gb|CW432220.1|CW432220 fsbb001f146m24f0 Sorghum methylation... 311 6e-083
gb|CW191310.1|CW191310 104_613_11178426_148_36941_075 Sorgh... 307 9e-082
gb|CW306660.1|CW306660 104_792_11466961_116_35709_007 Sorgh... 307 9e-082
gb|BG052312.1|BG052312 RHIZ2_12_B05.b1_A003 Rhizome2 (RHIZ2... 305 4e-081
gb|BG102866.1|BG102866 RHIZ2_34_D04.b1_A003 Rhizome2 (RHIZ2... 303 1e-080
gb|CW227263.1|CW227263 104_665_11205321_148_37224_037 Sorgh... 281 5e-074
gb|AI724884.1|AI724884 RHIZ1_30_G03.y3_A001 Rhizome1 (RHIZ1... 280 2e-073
gb|CL159717.1|CL159717 104_349_10804465_114_31381_289 Sorgh... 272 5e-071
gb|CW105328.1|CW105328 104_474_11012845_148_34446_053 Sorgh... 270 2e-070
gb|AW677105.1|AW677105 DG1_4_H07.b1_A002 Dark Grown 1 (DG1)... 268 8e-070
gb|CW490111.1|CW490111 fsbb001f275g08k0 Sorghum methylation... 248 7e-064
gb|BF656582.1|BF656582 FM1_51_H04.g1_A003 Floral-Induced Me... 244 1e-062
gb|CD431850.1|CD431850 ETH1_11_D10.g1_A002 Ethylene-treated... 244 1e-062
gb|CW394995.1|CW394995 fsbb001f082n15k0 Sorghum methylation... 238 7e-061
gb|CW104944.1|CW104944 104_474_11012677_148_34448_061 Sorgh... 226 3e-057
gb|CW415400.1|CW415400 fsbb001f115h21f0 Sorghum methylation... 226 3e-057
gb|BG560769.1|BG560769 RHIZ2_64_D04.g1_A003 Rhizome2 (RHIZ2... 220 2e-055
gb|CF430869.1|CF430869 NIT1_1_E01.b1_A002 Nitrogen-deficien... 214 1e-053
gb|CW424980.1|CW424980 fsbb001f135j06f0 Sorghum methylation... 198 6e-049
gb|CW088569.1|CW088569 104_433_10948227_251_32621_006 Sorgh... 192 4e-047
gb|CL152063.1|CL152063 104_335_10779694_114_31363_094 Sorgh... 190 1e-046
gb|AI723852.1|AI723852 RHIZ1_28_C06.y1_A001 Rhizome1 (RHIZ1... 188 6e-046
gb|AI724525.1|AI724525 RHIZ1_37_E01.y1_A001 Rhizome1 (RHIZ1... 178 6e-043
gb|CW113300.1|CW113300 104_487_11105369_148_34551_071 Sorgh... 176 2e-042
gb|CW238284.1|CW238284 104_695_11216646_148_37417_029 Sorgh... 163 3e-038
gb|CW344083.1|CW344083 104_846_11487770_116_36196_005 Sorgh... 163 3e-038
gb|BE353104.1|BE353104 DG1_4_H07.g1_A002 Dark Grown 1 (DG1)... 163 3e-038
gb|CW104943.1|CW104943 104_474_11012677_116_34452_061 Sorgh... 147 2e-033
gb|CW070742.1|CW070742 104_322_10590964_116_30543 Sorghum m... 115 7e-024
gb|CF483259.1|CF483259 POL1_21_A09.b1_A002 Pollen Sorghum b... 105 7e-021
gb|CW415401.1|CW415401 fsbb001f115h21k0 Sorghum methylation... 98 2e-018
gb|CW317076.1|CW317076 104_808_11473223_148_35855_084 Sorgh... 88 2e-015
gb|CW049116.1|CW049116 104_288_10513836_114_30200 Sorghum m... 86 6e-015
gb|CW424981.1|CW424981 fsbb001f135j06k0 Sorghum methylation... 74 2e-011
gb|BE358843.1|BE358843 DG1_32_D03.g1_A002 Dark Grown 1 (DG1... 72 9e-011
gb|CF434162.1|CF434162 NIT1_32_H03.g1_A002 Nitrogen-deficie... 70 4e-010
gb|CL179294.1|CL179294 104_388_10895213_148_31909_125 Sorgh... 62 9e-008
gb|CW443690.1|CW443690 fsbb001f163o17k0 Sorghum methylation... 62 9e-008
gb|AW282719.1|AW282719 LG1_292_F12.g1_A002 Light Grown 1 (L... 58 1e-006
gb|CW105329.1|CW105329 104_474_11012845_148_34479_053 Sorgh... 52 9e-005
gb|CL170389.1|CL170389 104_371_10813777_116_31791_097 Sorgh... 50 3e-004
gb|CL186013.1|CL186013 104_400_10899928_116_32405_056 Sorgh... 50 3e-004
gb|CW233439.1|CW233439 104_686_11213422_116_37376_085 Sorgh... 50 3e-004
gb|CW252274.1|CW252274 104_715_11224407_116_35096_060 Sorgh... 50 3e-004
gb|CW278768.1|CW278768 104_753_11406722_116_35426_009 Sorgh... 50 3e-004
gb|BE357302.1|BE357302 DG1_148_A05.b1_A002 Dark Grown 1 (DG... 50 3e-004
gb|CD431824.1|CD431824 ETH1_11_A02.b1_A002 Ethylene-treated... 50 3e-004
gb|BE358231.1|BE358231 DG1_26_E04.b2_A002 Dark Grown 1 (DG1... 48 0.001
gb|CW048930.1|CW048930 104_287_10513719_114_30211 Sorghum m... 44 0.021
gb|CF482526.1|CF482526 POL1_7_B06.g1_A002 Pollen Sorghum bi... 44 0.021
gb|CL184067.1|CL184067 104_397_10898601_114_32358_045 Sorgh... 42 0.083
gb|CL185417.1|CL185417 104_399_10899515_114_32390_040 Sorgh... 42 0.083
gb|CW078792.1|CW078792 104_397_10898601_114_32378_045 Sorgh... 42 0.083
gb|CW093077.1|CW093077 104_456_10999561_148_37470_015 Sorgh... 42 0.083
gb|CW180068.1|CW180068 104_594_11160441_148_36634_039 Sorgh... 42 0.083
gb|BZ338279.1|BZ338279 ia94c04.b1 WGS-SbicolorF (JM107 adap... 40 0.33
gb|BZ338280.1|BZ338280 ia94c04.g1 WGS-SbicolorF (JM107 adap... 40 0.33
gb|BZ628546.1|BZ628546 ih60h04.g1 WGS-SbicolorF (DH5a methy... 40 0.33
gb|CL177858.1|CL177858 104_385_10894137_148_31913_201 Sorgh... 40 0.33
gb|CW026197.1|CW026197 104_252_10497812_114_30513 Sorghum m... 40 0.33
gb|CW030837.1|CW030837 104_259_10500454_114_30397 Sorghum m... 40 0.33
gb|CW135788.1|CW135788 104_520_11118032_148_34835_024 Sorgh... 40 0.33
gb|CW171536.1|CW171536 104_582_11155796_116_36528_074 Sorgh... 40 0.33
gb|CW219133.1|CW219133 104_653_11196567_148_37142_064 Sorgh... 40 0.33
gb|CW261444.1|CW261444 104_728_11229512_148_35171_022 Sorgh... 40 0.33
gb|CW294426.1|CW294426 104_775_11415182_148_35609_057 Sorgh... 40 0.33
gb|CW301442.1|CW301442 104_785_11464203_148_36266_012 Sorgh... 40 0.33
gb|CW326642.1|CW326642 104_822_11478326_148_35965_063 Sorgh... 40 0.33
gb|CW333757.1|CW333757 104_832_11482134_116_36058_031 Sorgh... 40 0.33
gb|CW333758.1|CW333758 104_832_11482134_148_36057_031 Sorgh... 40 0.33
gb|CW378381.1|CW378381 fsbb001f057c01f0 Sorghum methylation... 40 0.33
gb|CW408451.1|CW408451 fsbb001f102f15f0 Sorghum methylation... 40 0.33
gb|CW417175.1|CW417175 fsbb001f120a23k0 Sorghum methylation... 40 0.33
gb|CW447774.1|CW447774 fsbb001f181a19k0 Sorghum methylation... 40 0.33
gb|CW473767.1|CW473767 fsbb001f229e18f0 Sorghum methylation... 40 0.33
gb|CW501354.1|CW501354 fsbb001f297b24f0 Sorghum methylation... 40 0.33
gb|BE367148.1|BE367148 PI1_43_G02.b1_A002 Pathogen induced ... 40 0.33
gb|BE599101.1|BE599101 PI1_85_D04.b1_A002 Pathogen induced ... 40 0.33
gb|BE600943.1|BE600943 PI1_95_A11.b1_A002 Pathogen induced ... 40 0.33
gb|BG357944.1|BG357944 OV2_32_C03.b1_A002 Ovary 2 (OV2) Sor... 40 0.33
gb|CD206170.1|CD206170 HS1_21_F01.b1_A012 Heat-shocked seed... 40 0.33
gb|CD210448.1|CD210448 HS1_51_B08.g1_A012 Heat-shocked seed... 40 0.33
gb|CD232457.1|CD232457 SS1_45_A02.g1_A012 Salt-stressed see... 40 0.33
gb|CD234335.1|CD234335 SS1_26_F05.g1_A012 Salt-stressed see... 40 0.33
gb|CD428919.1|CD428919 ETH1_1_E05.g1_A002 Ethylene-treated ... 40 0.33
gb|CF431897.1|CF431897 NIT1_11_A10.g1_A002 Nitrogen-deficie... 40 0.33
gb|CN139394.1|CN139394 OX1_21_G08.g1_A002 Oxidatively-stres... 40 0.33
>gb|CD213713.1|CD213713 HS1_52_G12.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_52_G12_A012 5', mRNA sequence
Length = 729
Score = 751 bits (379), Expect = 0.0
Identities = 441/461 (95%), Gaps = 3/461 (0%)
Strand = Plus / Plus
Query: 83 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccg 142
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 81 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagctggcggaggaggagcccg 140
Query: 143 cggcggagaagacgaccgccgggaagaagcccaaggcggagaagcggatccccgctggca 202
|||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 141 cggcggagaagacgccggccgggaagaagcccaaggcggagaagcgtctccccgctggca 200
Query: 203 agtccgccggcaaggagggcg---gcgagggcaagcgtggcaagaagaagggcaagaaga 259
||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||
Sbjct: 201 agtccgccggcaaggagggcggcggcgagggcaagcggggccggaagaagggcaagaaga 260
Query: 260 gcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcg 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcg 320
Query: 320 gcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagc 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagc 380
Query: 380 tggccggcgaggccgccaagctcgcgcgctacaacaagaagcccaccatcacgtcccgcg 439
| |||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 381 tcgccgccgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgcg 440
Query: 440 agatccagacctccgtgcgcctcgtgctccccggcgagctcgccaagcacgccgtctctg 499
|||||||||||||||| |||||||| |||||||| | |||||||||||||||||||||||
Sbjct: 441 agatccagacctccgtccgcctcgtcctccccggggggctcgccaagcacgccgtctctg 500
Query: 500 agggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||||||||||||||||||| |||||||||
Sbjct: 501 agggcaccaaggccgtcaccaagttcacctcgtcctaggct 541
>gb|BZ341857.1|BZ341857 ic79b05.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ic79b05 5', DNA sequence
Length = 685
Score = 712 bits (359), Expect = 0.0
Identities = 436/461 (94%), Gaps = 3/461 (0%)
Strand = Plus / Minus
Query: 83 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccg 142
||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 538 cgatggcgcccaaggccgagaagaaacccgcggcgaagaagctggcggaggaggagcccg 479
Query: 143 cggcggagaagacgaccgccgggaagaagcccaaggcggagaagcggatccccgctggca 202
|||| |||||| || | ||||||||||||||||| ||||||||||| | ||||||||||
Sbjct: 478 cggccgagaaggcgccggccgggaagaagcccaaagcggagaagcgtctgcccgctggca 419
Query: 203 agtccgccggcaaggagggcggcg---agggcaagcgtggcaagaagaagggcaagaaga 259
|||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||
Sbjct: 418 agtccgccggcaaggagggcggcggcgagggcaagcggggccggaagaagggcaagaaga 359
Query: 260 gcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcg 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcg 299
Query: 320 gcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagc 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagc 239
Query: 380 tggccggcgaggccgccaagctcgcgcgctacaacaagaagcccaccatcacgtcccgcg 439
| |||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 238 tcgccgccgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgcg 179
Query: 440 agatccagacctccgtgcgcctcgtgctccccggcgagctcgccaagcacgccgtctctg 499
|||||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||||
Sbjct: 178 agatccagacctccgtccgcctcgtcctccccggggagctcgcgaagcacgccgtctctg 119
Query: 500 agggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||||||||||||||||||| |||||||||
Sbjct: 118 agggcaccaaggccgtcaccaagttcacctcgtcctaggct 78
>gb|CW155043.1|CW155043 104_557_11145924_116_36362_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11145924, DNA
sequence
Length = 743
Score = 712 bits (359), Expect = 0.0
Identities = 436/461 (94%), Gaps = 3/461 (0%)
Strand = Plus / Plus
Query: 83 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccg 142
||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 95 cgatggcgcccaaggccgagaagaaacccgcggcgaagaagctggcggaggaggagcccg 154
Query: 143 cggcggagaagacgaccgccgggaagaagcccaaggcggagaagcggatccccgctggca 202
|||| |||||| || | ||||||||||||||||| ||||||||||| | ||||||||||
Sbjct: 155 cggccgagaaggcgccggccgggaagaagcccaaagcggagaagcgtctgcccgctggca 214
Query: 203 agtccgccggcaaggagggcggc---gagggcaagcgtggcaagaagaagggcaagaaga 259
||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||
Sbjct: 215 agtccgccggcaaggagggcggcggcgagggcaagcggggccggaagaagggcaagaaga 274
Query: 260 gcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcg 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcg 334
Query: 320 gcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagc 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 gcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagc 394
Query: 380 tggccggcgaggccgccaagctcgcgcgctacaacaagaagcccaccatcacgtcccgcg 439
| |||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 395 tcgccgccgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgcg 454
Query: 440 agatccagacctccgtgcgcctcgtgctccccggcgagctcgccaagcacgccgtctctg 499
|||||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||||
Sbjct: 455 agatccagacctccgtccgcctcgtcctccccggggagctcgcgaagcacgccgtctctg 514
Query: 500 agggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||||||||||||||||||| |||||||||
Sbjct: 515 agggcaccaaggccgtcaccaagttcacctcgtcctaggct 555
>gb|CX606979.1|CX606979 ANR1_6_B05.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_B05_A002 3', mRNA sequence
Length = 665
Score = 712 bits (359), Expect = 0.0
Identities = 436/461 (94%), Gaps = 3/461 (0%)
Strand = Plus / Plus
Query: 83 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccg 142
||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 52 cgatggcgcccaaggccgagaagaaacccgcggcgaagaagctggcggaggaggagcccg 111
Query: 143 cggcggagaagacgaccgccgggaagaagcccaaggcggagaagcggatccccgctggca 202
|||| |||||| || | ||||||||||||||||| ||||||||||| | ||||||||||
Sbjct: 112 cggccgagaaggcgccggccgggaagaagcccaaagcggagaagcgtctgcccgctggca 171
Query: 203 agtccgccggcaaggagggcgg---cgagggcaagcgtggcaagaagaagggcaagaaga 259
|||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||
Sbjct: 172 agtccgccggcaaggagggcggcggcgagggcaagcggggccggaagaagggcaagaaga 231
Query: 260 gcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcg 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 gcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcg 291
Query: 320 gcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagc 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 gcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagc 351
Query: 380 tggccggcgaggccgccaagctcgcgcgctacaacaagaagcccaccatcacgtcccgcg 439
| |||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 352 tcgccgccgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgcg 411
Query: 440 agatccagacctccgtgcgcctcgtgctccccggcgagctcgccaagcacgccgtctctg 499
|||||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||||
Sbjct: 412 agatccagacctccgtccgcctcgtcctccccggggagctcgcgaagcacgccgtctctg 471
Query: 500 agggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||||||||||||||||||| |||||||||
Sbjct: 472 agggcaccaaggccgtcaccaagttcacctcgtcctaggct 512
>gb|CX607063.1|CX607063 ANR1_6_B05.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_B05_A002 5', mRNA sequence
Length = 702
Score = 712 bits (359), Expect = 0.0
Identities = 436/461 (94%), Gaps = 3/461 (0%)
Strand = Plus / Plus
Query: 83 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccg 142
||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 71 cgatggcgcccaaggccgagaagaaacccgcggcgaagaagctggcggaggaggagcccg 130
Query: 143 cggcggagaagacgaccgccgggaagaagcccaaggcggagaagcggatccccgctggca 202
|||| |||||| || | ||||||||||||||||| ||||||||||| | ||||||||||
Sbjct: 131 cggccgagaaggcgccggccgggaagaagcccaaagcggagaagcgtctgcccgctggca 190
Query: 203 agtccgccggcaaggagggcggc---gagggcaagcgtggcaagaagaagggcaagaaga 259
||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||
Sbjct: 191 agtccgccggcaaggagggcggcggcgagggcaagcggggccggaagaagggcaagaaga 250
Query: 260 gcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcg 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcg 310
Query: 320 gcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagc 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagc 370
Query: 380 tggccggcgaggccgccaagctcgcgcgctacaacaagaagcccaccatcacgtcccgcg 439
| |||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 371 tcgccgccgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgcg 430
Query: 440 agatccagacctccgtgcgcctcgtgctccccggcgagctcgccaagcacgccgtctctg 499
|||||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||||
Sbjct: 431 agatccagacctccgtccgcctcgtcctccccggggagctcgcgaagcacgccgtctctg 490
Query: 500 agggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||||||||||||||||||| |||||||||
Sbjct: 491 agggcaccaaggccgtcaccaagttcacctcgtcctaggct 531
>gb|CX610420.1|CX610420 ANR1_18_D02.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_18_D02_A002 5', mRNA sequence
Length = 711
Score = 712 bits (359), Expect = 0.0
Identities = 436/461 (94%), Gaps = 3/461 (0%)
Strand = Plus / Plus
Query: 83 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccg 142
||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 70 cgatggcgcccaaggccgagaagaaacccgcggcgaagaagctggcggaggaggagcccg 129
Query: 143 cggcggagaagacgaccgccgggaagaagcccaaggcggagaagcggatccccgctggca 202
|||| |||||| || | ||||||||||||||||| ||||||||||| | ||||||||||
Sbjct: 130 cggccgagaaggcgccggccgggaagaagcccaaagcggagaagcgtctgcccgctggca 189
Query: 203 agtccgccggcaaggagggcggcg---agggcaagcgtggcaagaagaagggcaagaaga 259
|||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||
Sbjct: 190 agtccgccggcaaggagggcggcggcgagggcaagcggggccggaagaagggcaagaaga 249
Query: 260 gcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcg 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcg 309
Query: 320 gcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagc 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagc 369
Query: 380 tggccggcgaggccgccaagctcgcgcgctacaacaagaagcccaccatcacgtcccgcg 439
| |||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 370 tcgccgccgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgcg 429
Query: 440 agatccagacctccgtgcgcctcgtgctccccggcgagctcgccaagcacgccgtctctg 499
|||||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||||
Sbjct: 430 agatccagacctccgtccgcctcgtcctccccggggagctcgcgaagcacgccgtctctg 489
Query: 500 agggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||||||||||||||||||| |||||||||
Sbjct: 490 agggcaccaaggccgtcaccaagttcacctcgtcctaggct 530
>gb|CW410848.1|CW410848 fsbb001f105m09k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f105m09, DNA
sequence
Length = 598
Score = 704 bits (355), Expect = 0.0
Identities = 435/461 (94%), Gaps = 3/461 (0%)
Strand = Plus / Plus
Query: 83 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccg 142
||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 70 cgatggcgcccaaggccgagaagaaacccgcggcgaagaagctggcggaggaggagcccg 129
Query: 143 cggcggagaagacgaccgccgggaagaagcccaaggcggagaagcggatccccgctggca 202
|||| |||||| || | ||||||||||||||||| ||||||||||| | ||||||||||
Sbjct: 130 cggccgagaaggcgccggccgggaagaagcccaaagcggagaagcgtctgcccgctggca 189
Query: 203 agtccgccggcaaggagggcggcg---agggcaagcgtggcaagaagaagggcaagaaga 259
|||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||
Sbjct: 190 agtccgccggcaaggagggcggcggcgagggcaagcggggccggaagaagggcaagaaga 249
Query: 260 gcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcg 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcg 309
Query: 320 gcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagc 379
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gcatctcctccaagggcatgtccatcatgaactccttcatcaacgacatcttcgagaagc 369
Query: 380 tggccggcgaggccgccaagctcgcgcgctacaacaagaagcccaccatcacgtcccgcg 439
| |||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 370 tcgccgccgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgcg 429
Query: 440 agatccagacctccgtgcgcctcgtgctccccggcgagctcgccaagcacgccgtctctg 499
|||||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||||
Sbjct: 430 agatccagacctccgtccgcctcgtcctccccggggagctcgcgaagcacgccgtctctg 489
Query: 500 agggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||||||||||||||||||| |||||||||
Sbjct: 490 agggcaccaaggccgtcaccaagttcacctcgtcctaggct 530
>gb|CD462726.1|CD462726 ETH1_39_B03.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_39_B03_A002 5', mRNA sequence
Length = 637
Score = 698 bits (352), Expect = 0.0
Identities = 436/462 (94%), Gaps = 4/462 (0%)
Strand = Plus / Plus
Query: 83 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccg 142
||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 92 cgatggcgcccaaggccgagaagaaacccgcggcgaagaagctggcggaggaggagcccg 151
Query: 143 cggcggagaagacgaccgccgggaagaagcccaaggcggagaagcggatccccgctggca 202
|||| |||||| || | ||||||||||||||||| ||||||||||| | ||||||||||
Sbjct: 152 cggccgagaaggcgccggccgggaagaagcccaaagcggagaagcgtctgcccgctggca 211
Query: 203 agtccgccggcaaggagggcggcg---agggcaagcgtggcaagaagaagggcaagaaga 259
|||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||
Sbjct: 212 agtccgccggcaaggagggcggcggcgagggcaagcggggccggaagaagggcaagaaga 271
Query: 260 -gcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatc 318
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 agcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatc 331
Query: 319 ggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaag 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaag 391
Query: 379 ctggccggcgaggccgccaagctcgcgcgctacaacaagaagcccaccatcacgtcccgc 438
|| |||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 392 ctcgccgccgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgc 451
Query: 439 gagatccagacctccgtgcgcctcgtgctccccggcgagctcgccaagcacgccgtctct 498
||||||||||||||||| |||||||| |||||||| |||||||| |||||||||||||||
Sbjct: 452 gagatccagacctccgtccgcctcgtcctccccggggagctcgcgaagcacgccgtctct 511
Query: 499 gagggcaccaaggccgtcaccaagttcacctcctcctaggct 540
|||||||||||||||||||||||||||||||| |||||||||
Sbjct: 512 gagggcaccaaggccgtcaccaagttcacctcgtcctaggct 553
>gb|BF480763.1|BF480763 FM1_14_F11.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 592
Score = 684 bits (345), Expect = 0.0
Identities = 413/435 (94%), Gaps = 3/435 (0%)
Strand = Plus / Plus
Query: 109 cccgcggcgaagaagccggcggaggaggagcccgcggcggagaagacgaccgccgggaag 168
|||||||||||||||| ||||||||||||||||||||| |||||| || | |||||||||
Sbjct: 1 cccgcggcgaagaagctggcggaggaggagcccgcggccgagaaggcgccggccgggaag 60
Query: 169 aagcccaaggcggagaagcggatccccgctggcaagtccgccggcaaggagggcggc--- 225
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 61 aagcccaaggcggagaagcgtctccccgctggcaagtccgccggcaaggagggcggcggc 120
Query: 226 gagggcaagcgtggcaagaagaagggcaagaagagcgtggagacgtacaagatctacatc 285
||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagggcaagcggggccggaagaagggcaagaagagcgtggagacgtacaagatctacatc 180
Query: 286 ttcaaggtgctgaagcaggtgcacccggacatcggcatctcctccaaggccatgtccatc 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttcaaggtgctgaagcaggtgcacccggacatcggcatctcctccaaggccatgtccatc 240
Query: 346 atgaactccttcatcaacgacatcttcgagaagctggccggcgaggccgccaagctcgcg 405
||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 241 atgaactccttcatcaacgacatcttcgagaagctcgccgccgaggccgccaagctcgcg 300
Query: 406 cgctacaacaagaagcccaccatcacgtcccgcgagatccagacctccgtgcgcctcgtg 465
|| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 301 cggtacaacaagaagcccaccatcacctcccgcgagatccagacctccgtccgcctcgtc 360
Query: 466 ctccccggcgagctcgccaagcacgccgtctctgagggcaccaaggccgtcaccaagttc 525
|||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctccccggggagctcgcgaagcacgccgtctctgagggcaccaaggccgtcaccaagttc 420
Query: 526 acctcctcctaggct 540
||||| |||||||||
Sbjct: 421 acctcgtcctaggct 435
>gb|BF480894.1|BF480894 FM1_14_F11.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 507
Score = 674 bits (340), Expect = 0.0
Identities = 405/426 (95%), Gaps = 3/426 (0%)
Strand = Plus / Plus
Query: 83 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccg 142
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 82 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagctggcggaggaggagcccg 141
Query: 143 cggcggagaagacgaccgccgggaagaagcccaaggcggagaagcggatccccgctggca 202
|||| |||||| || | ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 142 cggccgagaaggcgccggccgggaagaagcccaaggcggagaagcgtctccccgctggca 201
Query: 203 agtccgccggcaaggagggcggcg---agggcaagcgtggcaagaagaagggcaagaaga 259
|||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||
Sbjct: 202 agtccgccggcaaggagggcggcggcgagggcaagcggggccggaagaagggcaagaaga 261
Query: 260 gcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcg 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcg 321
Query: 320 gcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagc 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagc 381
Query: 380 tggccggcgaggccgccaagctcgcgcgctacaacaagaagcccaccatcacgtcccgcg 439
| |||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 382 tcgccgccgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgcg 441
Query: 440 agatccagacctccgtgcgcctcgtgctccccggcgagctcgccaagcacgccgtctctg 499
|||||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||||
Sbjct: 442 agatccagacctccgtccgcctcgtcctccccggggagctcgcgaagcacgccgtctctg 501
Query: 500 agggca 505
||||||
Sbjct: 502 agggca 507
>gb|CL152064.1|CL152064 104_335_10779694_116_31364_094 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10779694, DNA
sequence
Length = 690
Score = 652 bits (329), Expect = 0.0
Identities = 403/427 (94%), Gaps = 3/427 (0%)
Strand = Plus / Minus
Query: 117 gaagaagccggcggaggaggagcccgcggcggagaagacgaccgccgggaagaagcccaa 176
|||||||| ||||||||||||||||||||| |||||| || | |||||||||||||||||
Sbjct: 690 gaagaagctggcggaggaggagcccgcggccgagaaggcgccggccgggaagaagcccaa 631
Query: 177 ggcggagaagcggatccccgctggcaagtccgccggcaaggagggcggcg---agggcaa 233
||||||||||| | |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 630 agcggagaagcgtctgcccgctggcaagtccgccggcaaggagggcggcggcgagggcaa 571
Query: 234 gcgtggcaagaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggt 293
||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gcggggccggaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggt 511
Query: 294 gctgaagcaggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactc 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 gctgaagcaggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactc 451
Query: 354 cttcatcaacgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaa 413
||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||
Sbjct: 450 cttcatcaacgacatcttcgagaagctcgccgccgaggccgccaagctcgcgcggtacaa 391
Query: 414 caagaagcccaccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccgg 473
|||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 390 caagaagcccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccgg 331
Query: 474 cgagctcgccaagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctc 533
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 330 ggagctcgcgaagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcgtc 271
Query: 534 ctaggct 540
|||||||
Sbjct: 270 ctaggct 264
>gb|CD213618.1|CD213618 HS1_52_G12.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_52_G12_A012 3', mRNA sequence
Length = 611
Score = 618 bits (312), Expect = e-175
Identities = 365/382 (95%), Gaps = 3/382 (0%)
Strand = Plus / Plus
Query: 162 cgggaagaagcccaaggcggagaagcggatccccgctggcaagtccgccggcaaggaggg 221
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 cgggaagaagcccaaggcggagaagcgtctccccgctggcaagtccgccggcaaggaggg 60
Query: 222 cggcg---agggcaagcgtggcaagaagaagggcaagaagagcgtggagacgtacaagat 278
||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61 cggcggcgagggcaagcggggccggaagaagggcaagaagagcgtggagacgtacaagat 120
Query: 279 ctacatcttcaaggtgctgaagcaggtgcacccggacatcggcatctcctccaaggccat 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctacatcttcaaggtgctgaagcaggtgcacccggacatcggcatctcctccaaggccat 180
Query: 339 gtccatcatgaactccttcatcaacgacatcttcgagaagctggccggcgaggccgccaa 398
|||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 181 gtccatcatgaactccttcatcaacgacatcttcgagaagctcgccgccgaggccgccaa 240
Query: 399 gctcgcgcgctacaacaagaagcccaccatcacgtcccgcgagatccagacctccgtgcg 458
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 241 gctcgcgcggtacaacaagaagcccaccatcacctcccgcgagatccagacctccgtccg 300
Query: 459 cctcgtgctccccggcgagctcgccaagcacgccgtctctgagggcaccaaggccgtcac 518
|||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cctcgtcctccccggggggctcgccaagcacgccgtctctgagggcaccaaggccgtcac 360
Query: 519 caagttcacctcctcctaggct 540
|||||||||||| |||||||||
Sbjct: 361 caagttcacctcgtcctaggct 382
>gb|BG240440.1|BG240440 OV1_30_A12.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 555
Score = 593 bits (299), Expect = e-167
Identities = 423/464 (91%), Gaps = 9/464 (1%)
Strand = Plus / Plus
Query: 82 ccgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagccc 141
||||||||||||||||| ||||||||||| || ||||||||||| | ||||||||| ||
Sbjct: 74 ccgatggcgcccaaggcggagaagaagccggcagcgaagaagcccgtggaggaggaatcc 133
Query: 142 gcggc------ggagaagacgaccgccgggaagaagcccaaggcggagaagcggatcccc 195
||||| ||||||| | |||| |||||||||||||||||||||||||| ||||
Sbjct: 134 gcggccccggcggagaagccccccgcggggaagaagcccaaggcggagaagcgtctcccg 193
Query: 196 gctggcaagtccgccggcaaggagggcggcgagggcaagcgtggcaagaagaagggcaag 255
|| |||||||||||| ||||||||||||||||| ||| | || |||||||||||||
Sbjct: 194 gcgggcaagtccgccagcaaggagggcggcgag---aagaggggtcggaagaagggcaag 250
Query: 256 aagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggac 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 aagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggac 310
Query: 316 atcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgag 375
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 311 atcggcatctcctccaaggccatgtccatcatgaactcgttcatcaacgacatcttcgag 370
Query: 376 aagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcccaccatcacgtcc 435
||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 371 aagctcgccggcgaggccgccaagctcgcccgctacaacaagaagcccaccatcacttct 430
Query: 436 cgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgccaagcacgccgtc 495
|| ||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||
Sbjct: 431 cgggagatccagacctccgtccgcctcgtcctccccggggagctcgccaagcacgccgtc 490
Query: 496 tctgagggcaccaaggccgtcaccaagttcacctcctcctaggc 539
||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 491 tctgagggcaccaaggccgtcaccaagttcacctcgtcttaggc 534
>gb|BG488416.1|BG488416 RHIZ2_63_D10.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 556
Score = 593 bits (299), Expect = e-167
Identities = 423/464 (91%), Gaps = 9/464 (1%)
Strand = Plus / Plus
Query: 82 ccgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagccc 141
||||||||||||||||| ||||||||||| || ||||||||||| | |||||||||| ||
Sbjct: 80 ccgatggcgcccaaggcggagaagaagccggcagcgaagaagcccgtggaggaggagtcc 139
Query: 142 gcggc------ggagaagacgaccgccgggaagaagcccaaggcggagaagcggatcccc 195
||||| ||||||| | |||| |||||||||||||||||||||||||| ||||
Sbjct: 140 gcggccccggcggagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccg 199
Query: 196 gctggcaagtccgccggcaaggagggcggcgagggcaagcgtggcaagaagaagggcaag 255
|| |||||||||||| ||||||||||||||||| ||| | || |||||||||||||
Sbjct: 200 gcgggcaagtccgccagcaaggagggcggcgag---aagaggggtcggaagaagggcaag 256
Query: 256 aagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggac 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 aagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggac 316
Query: 316 atcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgag 375
||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 317 atcggtatctcctccaaggccatgtccatcatgaactccttcatcaatgacatcttcgag 376
Query: 376 aagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcccaccatcacgtcc 435
||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 377 aagctcgccggcgaggccgccaagctcgcccgctacaacaagaagcccaccatcacttct 436
Query: 436 cgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgccaagcacgccgtc 495
|| ||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||
Sbjct: 437 cgggagatccagacctccgtccgcctcgtcctccccggggagctcgccaagcacgccgtc 496
Query: 496 tctgagggcaccaaggccgtcaccaagttcacctcctcctaggc 539
||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 497 tctgagggcaccaaggccgtcaccaagttcacctcgtcttaggc 540
>gb|CW319235.1|CW319235 104_811_11474377_148_35884_003 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11474377, DNA
sequence
Length = 704
Score = 585 bits (295), Expect = e-165
Identities = 417/459 (90%), Gaps = 9/459 (1%)
Strand = Plus / Plus
Query: 81 accgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcc 140
||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 141 accgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcc 200
Query: 141 cgcg---------gcggagaagacgaccgccgggaagaagcccaaggcggagaagcggat 191
|||| ||||||||| | | || ||||||||||||||||| ||||||||| |
Sbjct: 201 cgcgaccgagaaggcggagaaggccccggcggggaagaagcccaaggccgagaagcggct 260
Query: 192 ccccgctggcaagtccgccggcaaggagggcggcgagggcaagcgtggcaagaagaaggg 251
|||||| |||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 261 ccccgcgggcaagtccgccggcaaggagggcggcgagggcaagaaggggaagaagaaggc 320
Query: 252 caagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcaccc 311
|||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 gaagaagtccgtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcaccc 380
Query: 312 ggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatctt 371
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggacatcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatctt 440
Query: 372 cgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcccaccatcac 431
||||||||| || | |||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 441 cgagaagcttgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcac 500
Query: 432 gtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgccaagcacgc 491
|||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 501 ctcccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgc 560
Query: 492 cgtctctgagggcaccaaggccgtcaccaagttcacctc 530
|||||| |||||||||||||| |||||||||||||||||
Sbjct: 561 cgtctccgagggcaccaaggctgtcaccaagttcacctc 599
>gb|CW417908.1|CW417908 fsbb001f121c05f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f121c05, DNA
sequence
Length = 812
Score = 585 bits (295), Expect = e-165
Identities = 417/459 (90%), Gaps = 9/459 (1%)
Strand = Plus / Plus
Query: 81 accgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcc 140
||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 91 accgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcc 150
Query: 141 cgcg---------gcggagaagacgaccgccgggaagaagcccaaggcggagaagcggat 191
|||| ||||||||| | | || ||||||||||||||||| ||||||||| |
Sbjct: 151 cgcgaccgagaaggcggagaaggccccggcggggaagaagcccaaggccgagaagcggct 210
Query: 192 ccccgctggcaagtccgccggcaaggagggcggcgagggcaagcgtggcaagaagaaggg 251
|||||| |||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 211 ccccgcgggcaagtccgccggcaaggagggcggcgagggcaagaaggggaagaagaaggc 270
Query: 252 caagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcaccc 311
|||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 271 gaagaagtccgtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcaccc 330
Query: 312 ggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatctt 371
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 ggacatcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatctt 390
Query: 372 cgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcccaccatcac 431
||||||||| || | |||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 391 cgagaagcttgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcac 450
Query: 432 gtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgccaagcacgc 491
|||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 451 ctcccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgc 510
Query: 492 cgtctctgagggcaccaaggccgtcaccaagttcacctc 530
|||||| |||||||||||||| |||||||||||||||||
Sbjct: 511 cgtctccgagggcaccaaggctgtcaccaagttcacctc 549
>gb|BE355360.1|BE355360 DG1_114_A03.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 526
Score = 585 bits (295), Expect = e-165
Identities = 417/459 (90%), Gaps = 9/459 (1%)
Strand = Plus / Plus
Query: 81 accgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcc 140
||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 61 accgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcc 120
Query: 141 cgcg---------gcggagaagacgaccgccgggaagaagcccaaggcggagaagcggat 191
|||| ||||||||| | | || ||||||||||||||||| ||||||||| |
Sbjct: 121 cgcgaccgagaaggcggagaaggccccggcggggaagaagcccaaggccgagaagcggct 180
Query: 192 ccccgctggcaagtccgccggcaaggagggcggcgagggcaagcgtggcaagaagaaggg 251
|||||| |||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 181 ccccgcgggcaagtccgccggcaaggagggcggcgagggcaagaaggggaagaagaaggc 240
Query: 252 caagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcaccc 311
|||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 241 gaagaagtccgtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcaccc 300
Query: 312 ggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatctt 371
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggacatcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatctt 360
Query: 372 cgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcccaccatcac 431
||||||||| || | |||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 361 cgagaagcttgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcac 420
Query: 432 gtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgccaagcacgc 491
|||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 421 ctcccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgc 480
Query: 492 cgtctctgagggcaccaaggccgtcaccaagttcacctc 530
|||||| |||||||||||||| |||||||||||||||||
Sbjct: 481 cgtctccgagggcaccaaggctgtcaccaagttcacctc 519
>gb|CW191309.1|CW191309 104_613_11178426_116_36942_075 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11178426, DNA
sequence
Length = 724
Score = 583 bits (294), Expect = e-164
Identities = 410/448 (91%), Gaps = 3/448 (0%)
Strand = Plus / Plus
Query: 83 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccg 142
|||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 161 cgatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccg 220
Query: 143 cggcggagaagacgaccgccgggaagaagcccaaggcggagaagcggatccccgctggca 202
|||| |||||| | | || |||||||||||||||||||||||||| ||||||| ||||
Sbjct: 221 cggccgagaaggccccggcggggaagaagcccaaggcggagaagcgcctccccgcgggca 280
Query: 203 agtccgccggcaaggagggcggcgagggcaagcgtggcaagaagaagggcaagaagagcg 262
|||| |||||||||||||||||||| |||| ||||||||||||| ||||||| |
Sbjct: 281 agtctgccggcaaggagggcggcga---caagaagggcaagaagaaggccaagaagtcgg 337
Query: 263 tggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcggca 322
||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 338 tggagacctacaagatctacatcttcaaggtgctcaagcaggtgcaccccgacatcggca 397
Query: 323 tctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctgg 382
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 398 tctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctcg 457
Query: 383 ccggcgaggccgccaagctcgcgcgctacaacaagaagcccaccatcacgtcccgcgaga 442
|||||||||||||||||||||| |||||||||||||||||||||||||| ||| | ||||
Sbjct: 458 ccggcgaggccgccaagctcgcccgctacaacaagaagcccaccatcacctccagggaga 517
Query: 443 tccagacctccgtgcgcctcgtgctccccggcgagctcgccaagcacgccgtctctgagg 502
||||||| || ||||||||||| ||||| ||||||||||||||||||||||| || ||||
Sbjct: 518 tccagacgtcggtgcgcctcgtcctcccaggcgagctcgccaagcacgccgtgtccgagg 577
Query: 503 gcaccaaggccgtcaccaagttcacctc 530
||||||||||||| ||||||||||||||
Sbjct: 578 gcaccaaggccgttaccaagttcacctc 605
>gb|BE917707.1|BE917707 OV1_6_B04.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 554
Score = 579 bits (292), Expect = e-163
Identities = 418/460 (90%), Gaps = 15/460 (3%)
Strand = Plus / Plus
Query: 83 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccg 142
|||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 86 cgatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccg 145
Query: 143 cggc---------ggagaagacgaccgccgggaagaagcccaaggcggagaagcggatcc 193
|||| ||||||||| | || ||||||||||| |||||||||||||| |||
Sbjct: 146 cggccgagaaggcggagaagaccccggcggggaagaagccgaaggcggagaagcgcctcc 205
Query: 194 ccgctggcaagtcc---gccggcaaggagggcggcgagggcaagcgtggcaagaagaagg 250
|||| ||||||||| ||||||||||| ||||||||||||| |||||||||||||
Sbjct: 206 ccgcgggcaagtccagcgccggcaagga---cggcgagggcaagaagggcaagaagaagg 262
Query: 251 gcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacc 310
|||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 263 ccaagaagagcgtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcacc 322
Query: 311 cggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatct 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatct 382
Query: 371 tcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcccaccatca 430
|||||||||| |||| |||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 383 tcgagaagctcgccgccgagtccgccaagctcgcccgctacaacaagaagcccaccatca 442
Query: 431 cgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgccaagcacg 490
||||||| ||||||||||| ||||| |||||||| |||||||| ||||||||||||||||
Sbjct: 443 cgtcccgagagatccagacttccgtccgcctcgtcctccccggggagctcgccaagcacg 502
Query: 491 ccgtctctgagggcaccaaggccgtcaccaagttcacctc 530
||||||| ||||||||||||||||||||||||||||||||
Sbjct: 503 ccgtctccgagggcaccaaggccgtcaccaagttcacctc 542
>gb|CW410847.1|CW410847 fsbb001f105m09f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f105m09, DNA
sequence
Length = 733
Score = 569 bits (287), Expect = e-160
Identities = 359/381 (94%), Gaps = 4/381 (1%)
Strand = Plus / Minus
Query: 164 ggaagaagcccaaggcggagaagcggatccccgctggcaagtccgccggcaaggagggcg 223
||||||||||||| ||||||||||| | ||||||||||||||||||| |||||||||||
Sbjct: 733 ggaagaagcccaaagcggagaagcgtctgcccgctggcaagtccgccgccaaggagggcg 674
Query: 224 gcg---agggcaagcgtggcaagaagaagggcaagaagagcgtggagacgtac-aagatc 279
||| ||| |||||| ||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 673 gcggcgaggccaagcggggccggaagaagggcaagaagagcgtggagacgtaccaagatc 614
Query: 280 tacatcttcaaggtgctgaagcaggtgcacccggacatcggcatctcctccaaggccatg 339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tacatcttcaaggtgctgaagcaggtgcacccggacatcggcatctcctccaaggccatg 554
Query: 340 tccatcatgaactccttcatcaacgacatcttcgagaagctggccggcgaggccgccaag 399
||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 553 tccatcatgaactccttcatcaacgacatcttcgagaagctcgccgccgaggccgccaag 494
Query: 400 ctcgcgcgctacaacaagaagcccaccatcacgtcccgcgagatccagacctccgtgcgc 459
|||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 493 ctcgcgcggtacaacaagaagcccaccatcacctcccgcgagatccagacctccgtccgc 434
Query: 460 ctcgtgctccccggcgagctcgccaagcacgccgtctctgagggcaccaaggccgtcacc 519
||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 433 ctcgtcctccccggggagctcgcgaagcacgccgtctctgagggcaccaaggccgtcacc 374
Query: 520 aagttcacctcctcctaggct 540
||||||||||| |||||||||
Sbjct: 373 aagttcacctcgtcctaggct 353
>gb|CW128767.1|CW128767 104_510_11114194_148_34755_039 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11114194, DNA
sequence
Length = 652
Score = 561 bits (283), Expect = e-158
Identities = 369/397 (92%), Gaps = 3/397 (0%)
Strand = Plus / Minus
Query: 143 cggcggagaagacgaccgccgggaagaagcccaaggcggagaagcggatccccgctggca 202
||||||||||| | |||| |||||||||||||||||||||||||| |||| || ||||
Sbjct: 583 cggcggagaagccccccgcggggaagaagcccaaggcggagaagcgtctcccggcgggca 524
Query: 203 agtccgccggcaaggagggcggcgagggcaagcgtggcaagaagaagggcaagaagagcg 262
|||||||| ||||||||||||||||| ||| | || ||||||||||||||||||||
Sbjct: 523 agtccgccagcaaggagggcggcgag---aagaggggtcggaagaagggcaagaagagcg 467
Query: 263 tggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcggca 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcggca 407
Query: 323 tctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctgg 382
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 406 tctcctccaaggccatgtccatcatgaactcgttcatcaacgacatcttcgagaagctcg 347
Query: 383 ccggcgaggccgccaagctcgcgcgctacaacaagaagcccaccatcacgtcccgcgaga 442
|||||||||||||||||||||| |||||||||||||||||||||||||| || || ||||
Sbjct: 346 ccggcgaggccgccaagctcgcccgctacaacaagaagcccaccatcacttctcgggaga 287
Query: 443 tccagacctccgtgcgcctcgtgctccccggcgagctcgccaagcacgccgtctctgagg 502
||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 286 tccagacctccgtccgcctcgtcctccccggggagctcgccaagcacgccgtctctgagg 227
Query: 503 gcaccaaggccgtcaccaagttcacctcctcctaggc 539
|||||||||||||||||||||||||||| || |||||
Sbjct: 226 gcaccaaggccgtcaccaagttcacctcgtcttaggc 190
>gb|CW188377.1|CW188377 104_608_11172997_148_36734_061 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11172997, DNA
sequence
Length = 707
Score = 561 bits (283), Expect = e-158
Identities = 410/451 (90%), Gaps = 6/451 (1%)
Strand = Plus / Plus
Query: 83 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagcc---ggcggaggaggagc 139
||||||| |||||||| ||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 102 cgatggctcccaaggcggagaagaagccggcggcgaagaagcccgcggcggaggaggagc 161
Query: 140 ccgcggcggagaagacgaccgccgggaagaagcccaaggcggagaagcggatccccgctg 199
||||||| |||||| | | || |||||||||||||||||||||||||| |||| || |
Sbjct: 162 ccgcggccgagaaggccccggcggggaagaagcccaaggcggagaagcgcctcccggcgg 221
Query: 200 gcaagtccgccggcaaggagggcggcgagggcaagcgtggcaagaagaagggcaagaaga 259
||||||| ||||||||||| |||||||| |||| || |||||||||| |||||||
Sbjct: 222 gcaagtcggccggcaaggaaggcggcga---caagaaggggaagaagaaggccaagaagt 278
Query: 260 gcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcg 319
|||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 279 cggtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcaccctgacatcg 338
Query: 320 gcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagc 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagc 398
Query: 380 tggccggcgaggccgccaagctcgcgcgctacaacaagaagcccaccatcacgtcccgcg 439
| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||| | |
Sbjct: 399 tcgccgccgaggccgccaagctcgcgcgctacaacaagaagcccaccatcacctccaggg 458
Query: 440 agatccagacctccgtgcgcctcgtgctccccggcgagctcgccaagcacgccgtctctg 499
|||||||||| || ||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 459 agatccagacgtcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgtctccg 518
Query: 500 agggcaccaaggccgtcaccaagttcacctc 530
|||||||||||||||||||||||||||||||
Sbjct: 519 agggcaccaaggccgtcaccaagttcacctc 549
>gb|BF704683.1|BF704683 FM1_50_B08.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 563
Score = 561 bits (283), Expect = e-158
Identities = 407/447 (91%), Gaps = 6/447 (1%)
Strand = Plus / Plus
Query: 82 ccgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagccc 141
||||||||||||||||||||||||||||| |||| |||||||||||| | ||||||
Sbjct: 79 ccgatggcgcccaaggccgagaagaagccagcggagaagaagccggccgccgaggagaa- 137
Query: 142 gcggcggagaagacgaccgccgggaagaagcccaaggcggagaagcggatccccgctggc 201
|||||||||| || |||| ||||||||||||||||| |||||||| | ||||| |
Sbjct: 138 --ggcggagaaggcgcccgcagggaagaagcccaaggccgagaagcgcctgcccgcctcc 195
Query: 202 aagtccgccggcaaggagggcggcgagggcaagcgtggcaagaagaagggcaagaagagc 261
|||||| |||||||||||||||||||| ||| || |||||||||| ||||||||||
Sbjct: 196 aagtcctccggcaaggagggcggcgagaagaag---gggaagaagaaggccaagaagagc 252
Query: 262 gtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcggc 321
|||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 253 gtggagacctacaaaatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggc 312
Query: 322 atctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctg 381
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 atctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctc 372
Query: 382 gccggcgaggccgccaagctcgcgcgctacaacaagaagcccaccatcacgtcccgcgag 441
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 373 gccggcgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgcgag 432
Query: 442 atccagacctccgtgcgcctcgtgctccccggcgagctcgccaagcacgccgtctctgag 501
||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||| |||
Sbjct: 433 atccaaacctccgtgcgcctcgtcctccccggagagctcgccaagcacgccgtctccgag 492
Query: 502 ggcaccaaggccgtcaccaagttcacc 528
|| ||||||||||||||||||||||||
Sbjct: 493 ggaaccaaggccgtcaccaagttcacc 519
>gb|CW155044.1|CW155044 104_557_11145924_148_36361_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11145924, DNA
sequence
Length = 679
Score = 557 bits (281), Expect = e-157
Identities = 335/351 (95%), Gaps = 4/351 (1%)
Strand = Plus / Minus
Query: 193 cccgctggcaagtccgccggcaaggagggcggcg---agggcaagcgtggcaagaagaag 249
|||||||||||||||||||||||||||||||||| ||| |||||| ||| |||||||
Sbjct: 678 cccgctggcaagtccgccggcaaggagggcggcggcgaggtcaagcggggcc-gaagaag 620
Query: 250 ggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcac 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcac 560
Query: 310 ccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatc 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatc 500
Query: 370 ttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcccaccatc 429
||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 499 ttcgagaagctcgccgccgaggccgccaagctcgcgcggtacaacaagaagcccaccatc 440
Query: 430 acgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgccaagcac 489
|| ||||||||||||||||||||||| |||||||| |||||||| |||||||| ||||||
Sbjct: 439 acctcccgcgagatccagacctccgtccgcctcgtcctccccggggagctcgcgaagcac 380
Query: 490 gccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 379 gccgtctctgagggcaccaaggccgtcaccaagttcacctcgtcctaggct 329
>gb|CW183462.1|CW183462 104_599_11164629_148_36672_089 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11164629, DNA
sequence
Length = 693
Score = 555 bits (280), Expect = e-156
Identities = 405/446 (90%), Gaps = 3/446 (0%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 59 atggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgcg 118
Query: 145 gcggagaagacgaccgccgggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|| |||||| || | || |||||||||||||||||||||||||| |||| || ||||||
Sbjct: 119 gccgagaaggcgccggcggggaagaagcccaaggcggagaagcgcctcccggcgggcaag 178
Query: 205 tccgccggcaaggagggcggcgagggcaagcgtggcaagaagaagggcaagaagagcgtg 264
|| |||||||||||||| ||||| |||| ||||||||||||| |||||| |||
Sbjct: 179 tcggccggcaaggaggggggcga---caagaagggcaagaagaaggctaagaagtcggtg 235
Query: 265 gagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcggcatc 324
||||| ||||||||||||||||||||||||||||||||||| ||||| |||| |||||||
Sbjct: 236 gagacctacaagatctacatcttcaaggtgctgaagcaggtccaccccgacaccggcatc 295
Query: 325 tcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctggcc 384
|||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||
Sbjct: 296 tcctccaaggccatgtccatcatgaattccttcatcaacgatatcttcgagaagctcgcc 355
Query: 385 ggcgaggccgccaagctcgcgcgctacaacaagaagcccaccatcacgtcccgcgagatc 444
||||| |||||||||||||||||||||||||| |||||||||||||| ||| | ||||||
Sbjct: 356 ggcgaagccgccaagctcgcgcgctacaacaaaaagcccaccatcacctccagggagatc 415
Query: 445 cagacctccgtgcgcctcgtgctccccggcgagctcgccaagcacgccgtctctgagggc 504
||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 416 cagacctccgtccgcctcgtcctccccggcgagctcgccaagcacgccgtctccgagggc 475
Query: 505 accaaggccgtcaccaagttcacctc 530
||||||||||| ||||||||||||||
Sbjct: 476 accaaggccgttaccaagttcacctc 501
>gb|CD464058.1|CD464058 ETH1_48_H05.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_48_H05_A002 3', mRNA sequence
Length = 746
Score = 555 bits (280), Expect = e-156
Identities = 405/446 (90%), Gaps = 3/446 (0%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 19 atggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgcg 78
Query: 145 gcggagaagacgaccgccgggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|| |||||| || | || |||||||||||||||||||||||||| |||| || ||||||
Sbjct: 79 gccgagaaggcgccggcggggaagaagcccaaggcggagaagcgcctcccggcgggcaag 138
Query: 205 tccgccggcaaggagggcggcgagggcaagcgtggcaagaagaagggcaagaagagcgtg 264
|| |||||||||||||| ||||| |||| ||||||||||||| |||||| |||
Sbjct: 139 tcggccggcaaggaggggggcga---caagaagggcaagaagaaggctaagaagtcggtg 195
Query: 265 gagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcggcatc 324
||||| ||||||||||||||||||||||||||||||||||| ||||| |||| |||||||
Sbjct: 196 gagacctacaagatctacatcttcaaggtgctgaagcaggtccaccccgacaccggcatc 255
Query: 325 tcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctggcc 384
|||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||
Sbjct: 256 tcctccaaggccatgtccatcatgaattccttcatcaacgatatcttcgagaagctcgcc 315
Query: 385 ggcgaggccgccaagctcgcgcgctacaacaagaagcccaccatcacgtcccgcgagatc 444
||||| |||||||||||||||||||||||||| |||||||||||||| ||| | ||||||
Sbjct: 316 ggcgaagccgccaagctcgcgcgctacaacaaaaagcccaccatcacctccagggagatc 375
Query: 445 cagacctccgtgcgcctcgtgctccccggcgagctcgccaagcacgccgtctctgagggc 504
||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 376 cagacctccgtccgcctcgtcctccccggcgagctcgccaagcacgccgtctccgagggc 435
Query: 505 accaaggccgtcaccaagttcacctc 530
||||||||||| ||||||||||||||
Sbjct: 436 accaaggccgttaccaagttcacctc 461
>gb|BG488106.1|BG488106 RHIZ2_63_D10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 514
Score = 553 bits (279), Expect = e-156
Identities = 368/397 (92%), Gaps = 3/397 (0%)
Strand = Plus / Plus
Query: 143 cggcggagaagacgaccgccgggaagaagcccaaggcggagaagcggatccccgctggca 202
||||||||||| | |||| |||||||||||||||||||||||||| |||| || ||||
Sbjct: 19 cggcggagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccggcgggca 78
Query: 203 agtccgccggcaaggagggcggcgagggcaagcgtggcaagaagaagggcaagaagagcg 262
|||||||| ||||||||||||||||| ||| | || ||||||||||||||||||||
Sbjct: 79 agtccgccagcaaggagggcggcgag---aagaggggtcggaagaagggcaagaagagcg 135
Query: 263 tggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcggca 322
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 136 tggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcggta 195
Query: 323 tctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctgg 382
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 196 tctcctccaaggccatgtccatcatgaactccttcatcaatgacatcttcgagaagctcg 255
Query: 383 ccggcgaggccgccaagctcgcgcgctacaacaagaagcccaccatcacgtcccgcgaga 442
|||||||||||||||||||||| |||||||||||||||||||||||||| || || ||||
Sbjct: 256 ccggcgaggccgccaagctcgcccgctacaacaagaagcccaccatcacttctcgggaga 315
Query: 443 tccagacctccgtgcgcctcgtgctccccggcgagctcgccaagcacgccgtctctgagg 502
||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 316 tccagacctccgtccgcctcgtcctccccggggagctcgccaagcacgccgtctctgagg 375
Query: 503 gcaccaaggccgtcaccaagttcacctcctcctaggc 539
|||||||||||||||||||||||||||| || |||||
Sbjct: 376 gcaccaaggccgtcaccaagttcacctcgtcttaggc 412
>gb|BE917630.1|BE917630 OV1_6_B04.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 493
Score = 551 bits (278), Expect = e-155
Identities = 418/462 (90%), Gaps = 17/462 (3%)
Strand = Plus / Plus
Query: 83 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccg 142
|||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 10 cgatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccg 69
Query: 143 cggc---------ggagaagacgaccgccgggaagaagcccaaggcggagaagcggatcc 193
|||| ||||||||| | || ||||||||||| |||||||||||||| |||
Sbjct: 70 cggccgagaaggcggagaagaccccggcggggaagaagccgaaggcggagaagcgcctcc 129
Query: 194 ccgctggcaagtcc---gccggcaaggagggcggcgagggcaagcgtggcaagaagaagg 250
|||| ||||||||| ||||||||||| ||||||||||||| |||||||||||||
Sbjct: 130 ccgcgggcaagtccagcgccggcaagga---cggcgagggcaagaagggcaagaagaagg 186
Query: 251 gcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacc 310
|||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 187 ccaagaagagcgtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcacc 246
Query: 311 cggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatct 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 cggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatct 306
Query: 371 tcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcccaccatca 430
|||||||||| |||| |||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 307 tcgagaagctcgccgccgagtccgccaagctcgcccgctacaacaagaagcccaccatca 366
Query: 431 cgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgccaagcacg 490
||||||| ||||||||||| ||||| |||||||| |||||||| ||||||||||||||||
Sbjct: 367 cgtcccgagagatccagacttccgtccgcctcgtcctccccggggagctcgccaagcacg 426
Query: 491 ccgtctc-tgagggc-accaaggccgtcaccaagttcacctc 530
||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 427 ccgtctcacgagggcaaccaaggccgtcaccaagttcacctc 468
>gb|AW680031.1|AW680031 WS1_34_A02.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 558
Score = 539 bits (272), Expect = e-151
Identities = 344/368 (93%)
Strand = Plus / Plus
Query: 163 gggaagaagcccaaggcggagaagcggatccccgctggcaagtccgccggcaaggagggc 222
||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 54 gggaagaagcccaaggccgagaagcggctccccgcgggcaagtccgccggcaaggagggc 113
Query: 223 ggcgagggcaagcgtggcaagaagaagggcaagaagagcgtggagacgtacaagatctac 282
|||||||||||| || |||||||||| |||||| ||||||||| ||||||||||||
Sbjct: 114 ggcgagggcaagaaggggaagaagaaggcgaagaagtccgtggagacctacaagatctac 173
Query: 283 atcttcaaggtgctgaagcaggtgcacccggacatcggcatctcctccaaggccatgtcc 342
|||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 174 atcttcaaggtgctcaagcaggtgcacccggacatcggcatctcgtccaaggccatgtcc 233
Query: 343 atcatgaactccttcatcaacgacatcttcgagaagctggccggcgaggccgccaagctc 402
|||||||||||||||||||||||||||||||||||||| || | |||| ||||||||||
Sbjct: 234 atcatgaactccttcatcaacgacatcttcgagaagcttgcggccgagtccgccaagctg 293
Query: 403 gcgcgctacaacaagaagcccaccatcacgtcccgcgagatccagacctccgtgcgcctc 462
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 294 gcgcgctacaacaagaagcccaccatcacctcccgcgagatccagacctcggtgcgcctc 353
Query: 463 gtgctccccggcgagctcgccaagcacgccgtctctgagggcaccaaggccgtcaccaag 522
|| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 354 gtcctccccggcgagctcgccaagcacgccgtctccgagggcaccaaggctgtcaccaag 413
Query: 523 ttcacctc 530
||||||||
Sbjct: 414 ttcacctc 421
Score = 46.1 bits (23), Expect = 0.005
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 119 agaagccggcggaggaggagcccgcggcggagaag 153
||||||| |||||||||||||||||| | ||||||
Sbjct: 1 agaagcccgcggaggaggagcccgcgaccgagaag 35
>gb|BE355526.1|BE355526 DG1_114_A03.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 662
Score = 539 bits (272), Expect = e-151
Identities = 344/368 (93%)
Strand = Plus / Plus
Query: 163 gggaagaagcccaaggcggagaagcggatccccgctggcaagtccgccggcaaggagggc 222
||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 48 gggaagaagcccaaggccgagaagcggctccccgcgggcaagtccgccggcaaggagggc 107
Query: 223 ggcgagggcaagcgtggcaagaagaagggcaagaagagcgtggagacgtacaagatctac 282
|||||||||||| || |||||||||| |||||| ||||||||| ||||||||||||
Sbjct: 108 ggcgagggcaagaaggggaagaagaaggcgaagaagtccgtggagacctacaagatctac 167
Query: 283 atcttcaaggtgctgaagcaggtgcacccggacatcggcatctcctccaaggccatgtcc 342
|||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 168 atcttcaaggtgctcaagcaggtgcacccggacatcggcatctcgtccaaggccatgtcc 227
Query: 343 atcatgaactccttcatcaacgacatcttcgagaagctggccggcgaggccgccaagctc 402
|||||||||||||||||||||||||||||||||||||| || | |||| ||||||||||
Sbjct: 228 atcatgaactccttcatcaacgacatcttcgagaagcttgcggccgagtccgccaagctg 287
Query: 403 gcgcgctacaacaagaagcccaccatcacgtcccgcgagatccagacctccgtgcgcctc 462
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 288 gcgcgctacaacaagaagcccaccatcacctcccgcgagatccagacctcggtgcgcctc 347
Query: 463 gtgctccccggcgagctcgccaagcacgccgtctctgagggcaccaaggccgtcaccaag 522
|| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 348 gtcctccccggcgagctcgccaagcacgccgtctccgagggcaccaaggctgtcaccaag 407
Query: 523 ttcacctc 530
||||||||
Sbjct: 408 ttcacctc 415
>gb|BG410872.1|BG410872 EM1_27_A01.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 537
Score = 539 bits (272), Expect = e-151
Identities = 344/368 (93%)
Strand = Plus / Plus
Query: 163 gggaagaagcccaaggcggagaagcggatccccgctggcaagtccgccggcaaggagggc 222
||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 20 gggaagaagcccaaggccgagaagcggctccccgcgggcaagtccgccggcaaggagggc 79
Query: 223 ggcgagggcaagcgtggcaagaagaagggcaagaagagcgtggagacgtacaagatctac 282
|||||||||||| || |||||||||| |||||| ||||||||| ||||||||||||
Sbjct: 80 ggcgagggcaagaaggggaagaagaaggcgaagaagtccgtggagacctacaagatctac 139
Query: 283 atcttcaaggtgctgaagcaggtgcacccggacatcggcatctcctccaaggccatgtcc 342
|||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 140 atcttcaaggtgctcaagcaggtgcacccggacatcggcatctcgtccaaggccatgtcc 199
Query: 343 atcatgaactccttcatcaacgacatcttcgagaagctggccggcgaggccgccaagctc 402
|||||||||||||||||||||||||||||||||||||| || | |||| ||||||||||
Sbjct: 200 atcatgaactccttcatcaacgacatcttcgagaagcttgcggccgagtccgccaagctg 259
Query: 403 gcgcgctacaacaagaagcccaccatcacgtcccgcgagatccagacctccgtgcgcctc 462
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 260 gcgcgctacaacaagaagcccaccatcacctcccgcgagatccagacctcggtgcgcctc 319
Query: 463 gtgctccccggcgagctcgccaagcacgccgtctctgagggcaccaaggccgtcaccaag 522
|| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 320 gtcctccccggcgagctcgccaagcacgccgtctccgagggcaccaaggctgtcaccaag 379
Query: 523 ttcacctc 530
||||||||
Sbjct: 380 ttcacctc 387
>gb|AW564395.1|AW564395 LG1_292_F12.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 568
Score = 537 bits (271), Expect = e-151
Identities = 404/447 (90%), Gaps = 6/447 (1%)
Strand = Plus / Plus
Query: 82 ccgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagccc 141
||||||||||||||||||||||||||||| |||| |||||||||||| | ||||||
Sbjct: 74 ccgatggcgcccaaggccgagaagaagccagcggagaagaagccggccgccgaggagaa- 132
Query: 142 gcggcggagaagacgaccgccgggaagaagcccaaggcggagaagcggatccccgctggc 201
|||||||||| || |||| || |||||||||||||| |||||||| | ||||| |
Sbjct: 133 --ggcggagaaggcgcccgcaggaaagaagcccaaggccgagaagcgcctgcccgcctcc 190
Query: 202 aagtccgccggcaaggagggcggcgagggcaagcgtggcaagaagaagggcaagaagagc 261
|||||| |||| ||||||||||||||| ||| || |||||||||| ||||||||||
Sbjct: 191 aagtcctccggtaaggagggcggcgagaagaag---gggaagaagaaggccaagaagagc 247
Query: 262 gtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcggc 321
|||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 248 gtggagacctacaaaatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggc 307
Query: 322 atctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctg 381
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 308 atctcctccaaggccatgtccatcatgaactccttcatcaatgacatcttcgagaagctc 367
Query: 382 gccggcgaggccgccaagctcgcgcgctacaacaagaagcccaccatcacgtcccgcgag 441
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 368 gccggcgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgcgag 427
Query: 442 atccagacctccgtgcgcctcgtgctccccggcgagctcgccaagcacgccgtctctgag 501
||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||| |||
Sbjct: 428 atccaaacctccgtgcgcctcgtcctccccggagagctcgccaagcacgccgtctccgag 487
Query: 502 ggcaccaaggccgtcaccaagttcacc 528
|| ||||||||||||||||||||||||
Sbjct: 488 ggaaccaaggccgtcaccaagttcacc 514
>gb|BE593143.1|BE593143 WS1_98_A10.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 596
Score = 537 bits (271), Expect = e-151
Identities = 404/447 (90%), Gaps = 6/447 (1%)
Strand = Plus / Plus
Query: 82 ccgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagccc 141
||||||||||||||||||||||||||||| |||| |||||||||||| | ||||||
Sbjct: 20 ccgatggcgcccaaggccgagaagaagccagcggagaagaagccggccgccgaggagaa- 78
Query: 142 gcggcggagaagacgaccgccgggaagaagcccaaggcggagaagcggatccccgctggc 201
|||||||||| || |||| || |||||||||||||| |||||||| | ||||| |
Sbjct: 79 --ggcggagaaggcgcccgcaggaaagaagcccaaggccgagaagcgcctgcccgcctcc 136
Query: 202 aagtccgccggcaaggagggcggcgagggcaagcgtggcaagaagaagggcaagaagagc 261
|||||| |||| ||||||||||||||| ||| || |||||||||| ||||||||||
Sbjct: 137 aagtcctccggtaaggagggcggcgagaagaag---gggaagaagaaggccaagaagagc 193
Query: 262 gtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcggc 321
|||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 194 gtggagacctacaaaatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggc 253
Query: 322 atctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctg 381
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 254 atctcctccaaggccatgtccatcatgaactccttcatcaatgacatcttcgagaagctc 313
Query: 382 gccggcgaggccgccaagctcgcgcgctacaacaagaagcccaccatcacgtcccgcgag 441
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 314 gccggcgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgcgag 373
Query: 442 atccagacctccgtgcgcctcgtgctccccggcgagctcgccaagcacgccgtctctgag 501
||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||| |||
Sbjct: 374 atccaaacctccgtgcgcctcgtcctccccggagagctcgccaagcacgccgtctccgag 433
Query: 502 ggcaccaaggccgtcaccaagttcacc 528
|| ||||||||||||||||||||||||
Sbjct: 434 ggaaccaaggccgtcaccaagttcacc 460
>gb|CD431873.1|CD431873 ETH1_11_A02.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_11_A02_A002 5', mRNA sequence
Length = 667
Score = 537 bits (271), Expect = e-151
Identities = 404/447 (90%), Gaps = 6/447 (1%)
Strand = Plus / Plus
Query: 82 ccgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagccc 141
||||||||||||||||||||||||||||| |||| |||||||||||| | ||||||
Sbjct: 98 ccgatggcgcccaaggccgagaagaagccagcggagaagaagccggccgccgaggagaa- 156
Query: 142 gcggcggagaagacgaccgccgggaagaagcccaaggcggagaagcggatccccgctggc 201
|||||||||| || |||| || |||||||||||||| |||||||| | ||||| |
Sbjct: 157 --ggcggagaaggcgcccgcaggaaagaagcccaaggccgagaagcgcctgcccgcctcc 214
Query: 202 aagtccgccggcaaggagggcggcgagggcaagcgtggcaagaagaagggcaagaagagc 261
|||||| |||| ||||||||||||||| ||| || |||||||||| ||||||||||
Sbjct: 215 aagtcctccggtaaggagggcggcgagaagaag---gggaagaagaaggccaagaagagc 271
Query: 262 gtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcggc 321
|||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 272 gtggagacctacaaaatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggc 331
Query: 322 atctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctg 381
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 332 atctcctccaaggccatgtccatcatgaactccttcatcaatgacatcttcgagaagctc 391
Query: 382 gccggcgaggccgccaagctcgcgcgctacaacaagaagcccaccatcacgtcccgcgag 441
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 392 gccggcgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgcgag 451
Query: 442 atccagacctccgtgcgcctcgtgctccccggcgagctcgccaagcacgccgtctctgag 501
||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||| |||
Sbjct: 452 atccaaacctccgtgcgcctcgtcctccccggagagctcgccaagcacgccgtctccgag 511
Query: 502 ggcaccaaggccgtcaccaagttcacc 528
|| ||||||||||||||||||||||||
Sbjct: 512 ggaaccaaggccgtcaccaagttcacc 538
>gb|CN150853.1|CN150853 WOUND1_71_G11.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_71_G11_A002 5', mRNA sequence
Length = 765
Score = 537 bits (271), Expect = e-151
Identities = 404/447 (90%), Gaps = 6/447 (1%)
Strand = Plus / Plus
Query: 82 ccgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagccc 141
||||||||||||||||||||||||||||| |||| |||||||||||| | ||||||
Sbjct: 80 ccgatggcgcccaaggccgagaagaagccagcggagaagaagccggccgccgaggagaa- 138
Query: 142 gcggcggagaagacgaccgccgggaagaagcccaaggcggagaagcggatccccgctggc 201
|||||||||| || |||| || |||||||||||||| |||||||| | ||||| |
Sbjct: 139 --ggcggagaaggcgcccgctggaaagaagcccaaggccgagaagcgcctgcccgcctcc 196
Query: 202 aagtccgccggcaaggagggcggcgagggcaagcgtggcaagaagaagggcaagaagagc 261
|||||| |||| ||||||||||||||| ||| || |||||||||| ||||||||||
Sbjct: 197 aagtcctccggtaaggagggcggcgagaagaag---gggaagaagaaggccaagaagagc 253
Query: 262 gtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcggc 321
|||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 254 gtggagacctacaaaatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggc 313
Query: 322 atctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctg 381
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 314 atctcctccaaggccatgtccatcatgaactccttcatcaatgacatcttcgagaagctc 373
Query: 382 gccggcgaggccgccaagctcgcgcgctacaacaagaagcccaccatcacgtcccgcgag 441
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 374 gccggcgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgcgag 433
Query: 442 atccagacctccgtgcgcctcgtgctccccggcgagctcgccaagcacgccgtctctgag 501
||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||| |||
Sbjct: 434 atccaaacctccgtgcgcctcgtcctccccggagagctcgccaagcacgccgtctccgag 493
Query: 502 ggcaccaaggccgtcaccaagttcacc 528
|| ||||||||||||||||||||||||
Sbjct: 494 ggaaccaaggccgtcaccaagttcacc 520
>gb|AW745446.1|AW745446 WS1_34_A02.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 500
Score = 535 bits (270), Expect = e-150
Identities = 386/426 (90%), Gaps = 9/426 (2%)
Strand = Plus / Plus
Query: 81 accgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcc 140
||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 71 accgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcc 130
Query: 141 cgcg---------gcggagaagacgaccgccgggaagaagcccaaggcggagaagcggat 191
|||| ||||||||| | | || ||||||||||||||||| ||||||||| |
Sbjct: 131 cgcgaccgagaaggcggagaaggccccggcggggaagaagcccaaggccgagaagcggct 190
Query: 192 ccccgctggcaagtccgccggcaaggagggcggcgagggcaagcgtggcaagaagaaggg 251
|||||| |||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 191 ccccgcgggcaagtccgccggcaaggagggcggcgagggcaagaaggggaagaagaaggc 250
Query: 252 caagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcaccc 311
|||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 251 gaagaagtccgtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcaccc 310
Query: 312 ggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatctt 371
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ggacatcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatctt 370
Query: 372 cgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcccaccatcac 431
||||||||| || | |||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 371 cgagaagcttgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcac 430
Query: 432 gtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgccaagcacgc 491
|||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 431 ctcccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgc 490
Query: 492 cgtctc 497
||||||
Sbjct: 491 cgtctc 496
>gb|BG411209.1|BG411209 EM1_27_A01.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 498
Score = 535 bits (270), Expect = e-150
Identities = 386/426 (90%), Gaps = 9/426 (2%)
Strand = Plus / Plus
Query: 81 accgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcc 140
||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 69 accgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcc 128
Query: 141 cgcg---------gcggagaagacgaccgccgggaagaagcccaaggcggagaagcggat 191
|||| ||||||||| | | || ||||||||||||||||| ||||||||| |
Sbjct: 129 cgcgaccgagaaggcggagaaggccccggcggggaagaagcccaaggccgagaagcggct 188
Query: 192 ccccgctggcaagtccgccggcaaggagggcggcgagggcaagcgtggcaagaagaaggg 251
|||||| |||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 189 ccccgcgggcaagtccgccggcaaggagggcggcgagggcaagaaggggaagaagaaggc 248
Query: 252 caagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcaccc 311
|||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 249 gaagaagtccgtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcaccc 308
Query: 312 ggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatctt 371
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ggacatcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatctt 368
Query: 372 cgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcccaccatcac 431
||||||||| || | |||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 369 cgagaagcttgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcac 428
Query: 432 gtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgccaagcacgc 491
|||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 429 ctcccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctcgccaagcacgc 488
Query: 492 cgtctc 497
||||||
Sbjct: 489 cgtctc 494
>gb|CW129063.1|CW129063 104_511_11114353_148_34760_015 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11114353, DNA
sequence
Length = 698
Score = 529 bits (267), Expect = e-148
Identities = 394/435 (90%), Gaps = 6/435 (1%)
Strand = Plus / Plus
Query: 102 gaagaagcccgcggcgaagaagccggcggaggaggagcccgcggcggagaagacgaccgc 161
|||||||||||||| | || |||| ||||| ||| | | ||||||||||| | ||||
Sbjct: 205 gaagaagcccgcggaggaggagccctcggagaaggcggctccggcggagaaggcccccgc 264
Query: 162 cgggaagaagcccaaggcggagaagcggatccccgctggcaagtc---cgccggcaagga 218
||||||||||||||||||||||||||| |||| || |||||||| ||||||||||||
Sbjct: 265 ggggaagaagcccaaggcggagaagcggctcccggcgggcaagtcgtccgccggcaagga 324
Query: 219 gggcggcgagggcaagcgtggcaagaagaagggcaagaagagcgtggagacgtacaagat 278
|||||||||| ||| || | ||||||||||||||||||||||||||| ||||||||
Sbjct: 325 gggcggcgagaagaag---gggaggaagaagggcaagaagagcgtggagacctacaagat 381
Query: 279 ctacatcttcaaggtgctgaagcaggtgcacccggacatcggcatctcctccaaggccat 338
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ctacatcttcaaggtcctgaagcaggtgcacccggacatcggcatctcctccaaggccat 441
Query: 339 gtccatcatgaactccttcatcaacgacatcttcgagaagctggccggcgaggccgccaa 398
||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 442 gtccatcatgaactccttcatcaacgacatcttcgagaagctggccgcggagtccgccaa 501
Query: 399 gctcgcgcgctacaacaagaagcccaccatcacgtcccgcgagatccagacctccgtgcg 458
|||||| ||||||||||||||||||||||| || ||||||||||||||||||||||| ||
Sbjct: 502 gctcgcccgctacaacaagaagcccaccattacctcccgcgagatccagacctccgtccg 561
Query: 459 cctcgtgctccccggcgagctcgccaagcacgccgtctctgagggcaccaaggccgtcac 518
|||||| |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 562 cctcgtcctccccggggagctcgccaagcacgccgtctccgagggtaccaaggccgtcac 621
Query: 519 caagttcacctcctc 533
|||||||||||||||
Sbjct: 622 caagttcacctcctc 636
Score = 85.7 bits (43), Expect = 6e-015
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 83 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagccc 141
|||||||||||||||| ||||||||||| ||| |||||||||| |||||||||||||||
Sbjct: 171 cgatggcgcccaaggcagagaagaagccggcgtcgaagaagcccgcggaggaggagccc 229
>gb|CN126047.1|CN126047 RHOH1_14_H01.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_14_H01_A002 5', mRNA sequence
Length = 770
Score = 529 bits (267), Expect = e-148
Identities = 403/447 (90%), Gaps = 6/447 (1%)
Strand = Plus / Plus
Query: 82 ccgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagccc 141
||||||||||||||||||||||||||||| |||| |||||||||||| | ||||||
Sbjct: 80 ccgatggcgcccaaggccgagaagaagccagcggagaagaagccggccgccgaggagaa- 138
Query: 142 gcggcggagaagacgaccgccgggaagaagcccaaggcggagaagcggatccccgctggc 201
|||||||||| || |||| || |||||||||||||| |||||||| | ||||| |
Sbjct: 139 --ggcggagaaggcgcccgcaggaaagaagcccaaggccgagaagcgcctgcccgcctcc 196
Query: 202 aagtccgccggcaaggagggcggcgagggcaagcgtggcaagaagaagggcaagaagagc 261
|||||| |||| ||||||||||||||| ||| || |||||||||| ||||||||||
Sbjct: 197 aagtcctccggtaaggagggcggcgagaagaag---gggaagaagaaggccaagaagagc 253
Query: 262 gtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcggc 321
|||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 254 gtggagacctacaaaatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggc 313
Query: 322 atctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctg 381
||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 314 atctcctccaaggccatgtccatcatgaactccttcatcaatggcatcttcgagaagctc 373
Query: 382 gccggcgaggccgccaagctcgcgcgctacaacaagaagcccaccatcacgtcccgcgag 441
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 374 gccggcgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgcgag 433
Query: 442 atccagacctccgtgcgcctcgtgctccccggcgagctcgccaagcacgccgtctctgag 501
||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||| |||
Sbjct: 434 atccaaacctccgtgcgcctcgtcctccccggagagctcgccaagcacgccgtctccgag 493
Query: 502 ggcaccaaggccgtcaccaagttcacc 528
|| ||||||||||||||||||||||||
Sbjct: 494 ggaaccaaggccgtcaccaagttcacc 520
>gb|CX608442.1|CX608442 ANR1_38_D08.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_38_D08_A002 5', mRNA sequence
Length = 635
Score = 529 bits (267), Expect = e-148
Identities = 403/447 (90%), Gaps = 6/447 (1%)
Strand = Plus / Plus
Query: 82 ccgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagccc 141
||||||||||||||||||||||||||||| |||| |||||||||||| | ||||||
Sbjct: 72 ccgatggcgcccaaggccgagaagaagccagcggagaagaagccggccgccgaggagaa- 130
Query: 142 gcggcggagaagacgaccgccgggaagaagcccaaggcggagaagcggatccccgctggc 201
|||||||||| || |||| || |||||||||||||| |||||||| | ||||| |
Sbjct: 131 --ggcggagaaggcgcccgcaggaaagaagcccaaggccgagaagcgcctgcccgcctcc 188
Query: 202 aagtccgccggcaaggagggcggcgagggcaagcgtggcaagaagaagggcaagaagagc 261
|||||| |||| ||||||||||||||| ||| || |||||||||| ||||||||||
Sbjct: 189 aagtcctccggtaaggagggcggcgagaagaag---gggaagaagaaggccaagaagagc 245
Query: 262 gtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcggc 321
|||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 246 gtggagacctacaaaatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggc 305
Query: 322 atctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctg 381
||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 306 atctcctccaaggccatgtccatcatggactccttcatcaatgacatcttcgagaagctc 365
Query: 382 gccggcgaggccgccaagctcgcgcgctacaacaagaagcccaccatcacgtcccgcgag 441
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 366 gccggcgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgcgag 425
Query: 442 atccagacctccgtgcgcctcgtgctccccggcgagctcgccaagcacgccgtctctgag 501
||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||| |||
Sbjct: 426 atccaaacctccgtgcgcctcgtcctccccggagagctcgccaagcacgccgtctccgag 485
Query: 502 ggcaccaaggccgtcaccaagttcacc 528
|| ||||||||||||||||||||||||
Sbjct: 486 ggaaccaaggccgtcaccaagttcacc 512
>gb|BE599532.1|BE599532 PI1_88_F07.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 491
Score = 505 bits (255), Expect = e-141
Identities = 374/413 (90%), Gaps = 3/413 (0%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 81 atggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgcg 140
Query: 145 gcggagaagacgaccgccgggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|| |||||| || | || |||||||||||||||||||||||||| |||| || ||||||
Sbjct: 141 gccgagaaggcgccggcggggaagaagcccaaggcggagaagcgcctcccggcgggcaag 200
Query: 205 tccgccggcaaggagggcggcgagggcaagcgtggcaagaagaagggcaagaagagcgtg 264
|| |||||||||||||| ||||| |||| ||||||||||||| |||||| |||
Sbjct: 201 tcggccggcaaggaggggggcga---caagaagggcaagaagaaggctaagaagtcggtg 257
Query: 265 gagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcggcatc 324
||||| ||||||||||||||||||||||||||||||||||| ||||| |||| |||||||
Sbjct: 258 gagacctacaagatctacatcttcaaggtgctgaagcaggtccaccccgacaccggcatc 317
Query: 325 tcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctggcc 384
|||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||
Sbjct: 318 tcctccaaggccatgtccatcatgaattccttcatcaacgatatcttcgagaagctcgcc 377
Query: 385 ggcgaggccgccaagctcgcgcgctacaacaagaagcccaccatcacgtcccgcgagatc 444
||||| |||||||||||||||||||||||||| |||||||||||||| ||| | ||||||
Sbjct: 378 ggcgaagccgccaagctcgcgcgctacaacaaaaagcccaccatcacctccagggagatc 437
Query: 445 cagacctccgtgcgcctcgtgctccccggcgagctcgccaagcacgccgtctc 497
||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 438 cagacctccgtccgcctcgtcctccccggcgagctcgccaagcacgccgtctc 490
>gb|CW297850.1|CW297850 104_780_11462260_116_35647_012 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11462260, DNA
sequence
Length = 662
Score = 504 bits (254), Expect = e-141
Identities = 339/366 (92%), Gaps = 6/366 (1%)
Strand = Plus / Plus
Query: 171 gcccaaggcggagaagcggatccccgctggcaagtc---cgccggcaaggagggcggcga 227
||||||||||||||||||| |||| || |||||||| |||||||||||||||||||||
Sbjct: 1 gcccaaggcggagaagcggctcccggcgggcaagtcgtccgccggcaaggagggcggcga 60
Query: 228 gggcaagcgtggcaagaagaagggcaagaagagcgtggagacgtacaagatctacatctt 287
| ||| || | ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 61 gaagaag---gggaggaagaagggcaagaagagcgtggagacctacaagatctacatctt 117
Query: 288 caaggtgctgaagcaggtgcacccggacatcggcatctcctccaaggccatgtccatcat 347
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 caaggtcctgaagcaggtgcacccggacatcggcatctcctccaaggccatgtccatcat 177
Query: 348 gaactccttcatcaacgacatcttcgagaagctggccggcgaggccgccaagctcgcgcg 407
|||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||
Sbjct: 178 gaactccttcatcaacgacatcttcgagaagctggccgcggagtccgccaagctcgcccg 237
Query: 408 ctacaacaagaagcccaccatcacgtcccgcgagatccagacctccgtgcgcctcgtgct 467
||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||
Sbjct: 238 ctacaacaagaagcccaccattacctcccgcgagatccagacctccgtccgcctcgtcct 297
Query: 468 ccccggcgagctcgccaagcacgccgtctctgagggcaccaaggccgtcaccaagttcac 527
|||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 298 ccccggggagctcgccaagcacgccgtctccgagggtaccaaggccgtcaccaagttcac 357
Query: 528 ctcctc 533
||||||
Sbjct: 358 ctcctc 363
>gb|BG102543.1|BG102543 RHIZ2_34_D04.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 495
Score = 504 bits (254), Expect = e-141
Identities = 345/374 (92%), Gaps = 6/374 (1%)
Strand = Plus / Plus
Query: 163 gggaagaagcccaaggcggagaagcggatccccgctggcaagtc---cgccggcaaggag 219
||||||||||||||||||||||||||| |||| || |||||||| || ||||||||||
Sbjct: 2 gggaagaagcccaaggcggagaagcggctcccggcgggcaagtcgtccgtcggcaaggag 61
Query: 220 ggcggcgagggcaagcgtggcaagaagaagggcaagaagagcgtggagacgtacaagatc 279
||||||||| ||| || | ||||||||| ||||||||||||||||| |||||||||
Sbjct: 62 ggcggcgagaagaag---gggaggaagaaggggaagaagagcgtggagacctacaagatc 118
Query: 280 tacatcttcaaggtgctgaagcaggtgcacccggacatcggcatctcctccaaggccatg 339
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 tacatcttcaaggtcctgaagcaggtgcacccggacatcggcatctcctccaaggccatg 178
Query: 340 tccatcatgaactccttcatcaacgacatcttcgagaagctggccggcgaggccgccaag 399
|||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 179 tccatcatgaactccttcatcaacgacatcttcgagaagctggccgcggagtccgccaag 238
Query: 400 ctcgcgcgctacaacaagaagcccaccatcacgtcccgcgagatccagacctccgtgcgc 459
||||| ||||||||||||||||||||||| || ||||||||||||||||||||||| |||
Sbjct: 239 ctcgcccgctacaacaagaagcccaccattacctcccgcgagatccagacctccgtccgc 298
Query: 460 ctcgtgctccccggcgagctcgccaagcacgccgtctctgagggcaccaaggccgtcacc 519
||||| |||||||| ||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 299 ctcgtcctccccggggagctcgccaagcacgccgtctccgagggtaccaaggccgtcacc 358
Query: 520 aagttcacctcctc 533
||||||||||||||
Sbjct: 359 aagttcacctcctc 372
>gb|AI724175.1|AI724175 RHIZ1_8_A04.y2_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 509
Score = 496 bits (250), Expect = e-138
Identities = 339/368 (92%), Gaps = 3/368 (0%)
Strand = Plus / Plus
Query: 163 gggaagaagcccaaggcggagaagcggatccccgctggcaagtccgccggcaaggagggc 222
|||||||||||||||||||||||||| |||| || |||||||| |||||||||||||||
Sbjct: 20 gggaagaagcccaaggcggagaagcgcctcccggcgggcaagtcggccggcaaggagggc 79
Query: 223 ggcgagggcaagcgtggcaagaagaagggcaagaagagcgtggagacgtacaagatctac 282
||||| |||| ||||||||||||| ||||||| |||||||| ||||||||||||
Sbjct: 80 ggcga---caagaagggcaagaagaaggccaagaagtcggtggagacctacaagatctac 136
Query: 283 atcttcaaggtgctgaagcaggtgcacccggacatcggcatctcctccaaggccatgtcc 342
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 137 atcttcaaggtgctgaagcaggtgcaccccgacatcggcatctcctccaaggccatgtcc 196
Query: 343 atcatgaactccttcatcaacgacatcttcgagaagctggccggcgaggccgccaagctc 402
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 197 atcatgaactccttcatcaacgacatcttcgagaagctcgccggcgaggccgccaagctc 256
Query: 403 gcgcgctacaacaagaagcccaccatcacgtcccgcgagatccagacctccgtgcgcctc 462
|| |||||||||||||||||||||||||| ||| | ||||||||||| || |||||||||
Sbjct: 257 gcccgctacaacaagaagcccaccatcacctccagggagatccagacgtcggtgcgcctc 316
Query: 463 gtgctccccggcgagctcgccaagcacgccgtctctgagggcaccaaggccgtcaccaag 522
|| ||||| ||||||||||||||||||||||| || ||||||||||||||||| ||||||
Sbjct: 317 gtcctcccaggcgagctcgccaagcacgccgtgtccgagggcaccaaggccgttaccaag 376
Query: 523 ttcacctc 530
||||||||
Sbjct: 377 ttcacctc 384
>gb|BE593453.1|BE593453 WS1_98_A10.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 487
Score = 492 bits (248), Expect = e-137
Identities = 375/416 (90%), Gaps = 6/416 (1%)
Strand = Plus / Plus
Query: 82 ccgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagccc 141
||||||||||||||||||||||||||||| |||| |||||||||||| | ||||||
Sbjct: 74 ccgatggcgcccaaggccgagaagaagccagcggagaagaagccggccgccgaggagaa- 132
Query: 142 gcggcggagaagacgaccgccgggaagaagcccaaggcggagaagcggatccccgctggc 201
|||||||||| || |||| || |||||||||||||| |||||||| | ||||| |
Sbjct: 133 --ggcggagaaggcgcccgcaggaaagaagcccaaggccgagaagcgcctgcccgcctcc 190
Query: 202 aagtccgccggcaaggagggcggcgagggcaagcgtggcaagaagaagggcaagaagagc 261
|||||| |||| ||||||||||||||| ||| || |||||||||| ||||||||||
Sbjct: 191 aagtcctccggtaaggagggcggcgagaagaag---gggaagaagaaggccaagaagagc 247
Query: 262 gtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccggacatcggc 321
|||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 248 gtggagacctacaaaatctacatcttcaaggtgctgaagcaggtgcaccccgacatcggc 307
Query: 322 atctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcgagaagctg 381
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 308 atctcctccaaggccatgtccatcatgaactccttcatcaatgacatcttcgagaagctc 367
Query: 382 gccggcgaggccgccaagctcgcgcgctacaacaagaagcccaccatcacgtcccgcgag 441
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 368 gccggcgaggccgccaagctcgcgcggtacaacaagaagcccaccatcacctcccgcgag 427
Query: 442 atccagacctccgtgcgcctcgtgctccccggcgagctcgccaagcacgccgtctc 497
||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 428 atccaaacctccgtgcgcctcgtcctccccggagagctcgccaagcacgccgtctc 483
>gb|BE355445.1|BE355445 DG1_114_A03.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 452
Score = 476 bits (240), Expect = e-132
Identities = 353/392 (90%), Gaps = 9/392 (2%)
Strand = Plus / Plus
Query: 81 accgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcc 140
||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 61 accgatggcacccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcc 120
Query: 141 cgcg---------gcggagaagacgaccgccgggaagaagcccaaggcggagaagcggat 191
|||| ||||||||| | | || ||||||||||||||||| ||||||||| |
Sbjct: 121 cgcgaccgagaaggcggagaaggccccggcggggaagaagcccaaggccgagaagcggct 180
Query: 192 ccccgctggcaagtccgccggcaaggagggcggcgagggcaagcgtggcaagaagaaggg 251
|||||| |||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 181 ccccgcgggcaagtccgccggcaaggagggcggcgagggcaagaaggggaagaagaaggc 240
Query: 252 caagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcaccc 311
|||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 241 gaagaagtccgtggagacctacaagatctacatcttcaaggtgctcaagcaggtgcaccc 300
Query: 312 ggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatctt 371
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggacatcggcatctcgtccaaggccatgtccatcatgaactccttcatcaacgacatctt 360
Query: 372 cgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcccaccatcac 431
||||||||| || | |||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 361 cgagaagcttgcggccgagtccgccaagctggcgcgctacaacaagaagcccaccatcac 420
Query: 432 gtcccgcgagatccagacctccgtgcgcctcg 463
|||||||||||||||||||| ||||||||||
Sbjct: 421 ctcccgcgagatccagacctcggtgcgcctcg 452
>gb|BF481909.1|BF481909 FM1_22_H04.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 506
Score = 476 bits (240), Expect = e-132
Identities = 276/288 (95%)
Strand = Plus / Plus
Query: 241 aagaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaag 300
|||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 20 aagaagaaggccaagaagagcgtggagacctacaaaatctacatcttcaaggtgctgaag 79
Query: 301 caggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatc 360
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 caggtgcaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatc 139
Query: 361 aacgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaag 420
|||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 140 aacgacatcttcgagaagctcgccggcgaggccgccaagctcgcgcggtacaacaagaag 199
Query: 421 cccaccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctc 480
||||||||||| |||||||||||||| ||||||||||||||||| |||||||| ||||||
Sbjct: 200 cccaccatcacctcccgcgagatccaaacctccgtgcgcctcgtcctccccggagagctc 259
Query: 481 gccaagcacgccgtctctgagggcaccaaggccgtcaccaagttcacc 528
||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 260 gccaagcacgccgtctccgagggaaccaaggccgtcaccaagttcacc 307
>gb|BF656458.1|BF656458 FM1_50_B08.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 556
Score = 476 bits (240), Expect = e-132
Identities = 276/288 (95%)
Strand = Plus / Plus
Query: 241 aagaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaag 300
|||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 17 aagaagaaggccaagaagagcgtggagacctacaaaatctacatcttcaaggtgctgaag 76
Query: 301 caggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatc 360
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 caggtgcaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatc 136
Query: 361 aacgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaag 420
|||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 137 aacgacatcttcgagaagctcgccggcgaggccgccaagctcgcgcggtacaacaagaag 196
Query: 421 cccaccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctc 480
||||||||||| |||||||||||||| ||||||||||||||||| |||||||| ||||||
Sbjct: 197 cccaccatcacctcccgcgagatccaaacctccgtgcgcctcgtcctccccggagagctc 256
Query: 481 gccaagcacgccgtctctgagggcaccaaggccgtcaccaagttcacc 528
||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 257 gccaagcacgccgtctccgagggaaccaaggccgtcaccaagttcacc 304
>gb|BG052252.1|BG052252 RHIZ2_12_B05.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 464
Score = 474 bits (239), Expect = e-132
Identities = 330/359 (91%), Gaps = 6/359 (1%)
Strand = Plus / Plus
Query: 178 gcggagaagcggatccccgctggcaagtc---cgccggcaaggagggcggcgagggcaag 234
|||||||||||| |||| || |||||||| || ||||||||||||||||||| |||
Sbjct: 1 gcggagaagcggctcccggcgggcaagtcgtccgtcggcaaggagggcggcgagaagaag 60
Query: 235 cgtggcaagaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtg 294
|| | ||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 61 ---gggaggaagaaggggaagaagagcgtggagacctacaagatctacatcttcaaggtc 117
Query: 295 ctgaagcaggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactcc 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 ctgaagcaggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactcc 177
Query: 355 ttcatcaacgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaac 414
||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||
Sbjct: 178 ttcatcaacgacatcttcgagaagctggccgcggagtccgccaagctcgcccgctacaac 237
Query: 415 aagaagcccaccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggc 474
|||||||||||||| || ||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 238 aagaagcccaccattacctcccgcgagatccagacctccgtccgcctcgtcctccccggg 297
Query: 475 gagctcgccaagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctc 533
||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 298 gagctcgccaagcacgccgtctccgagggtaccaaggccgtcaccaagttcacctcctc 356
>gb|CW182557.1|CW182557 104_598_11164141_116_36663_061 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11164141, DNA
sequence
Length = 658
Score = 466 bits (235), Expect = e-129
Identities = 274/287 (95%)
Strand = Plus / Plus
Query: 242 agaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagc 301
||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 1 agaagaaggccaagaagagcgtggagacctacaaaatctacatcttcaaggtgctgaagc 60
Query: 302 aggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 361
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggtgcaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 120
Query: 362 acgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagc 421
| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 121 atgacatcttcgagaagctcgccggcgaggccgccaagctcgcgcggtacaacaagaagc 180
Query: 422 ccaccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcg 481
|||||||||| |||||||||||||| ||||||||||||||||| |||||||| |||||||
Sbjct: 181 ccaccatcacctcccgcgagatccaaacctccgtgcgcctcgtcctccccggagagctcg 240
Query: 482 ccaagcacgccgtctctgagggcaccaaggccgtcaccaagttcacc 528
|||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 241 ccaagcacgccgtctccgagggaaccaaggccgtcaccaagttcacc 287
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 318,331
Number of Sequences: 832831
Number of extensions: 318331
Number of successful extensions: 98546
Number of sequences better than 0.5: 175
Number of HSP's better than 0.5 without gapping: 175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97942
Number of HSP's gapped (non-prelim): 476
length of query: 857
length of database: 491,359,669
effective HSP length: 20
effective length of query: 837
effective length of database: 474,703,049
effective search space: 397326452013
effective search space used: 397326452013
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)