BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.249
(684 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG048965.1|BG048965 OV1_21_D10.g1_A002 Ovary 1 (OV1) Sor... 638 0.0
gb|BG240839.1|BG240839 OV1_38_H10.g1_A002 Ovary 1 (OV1) Sor... 638 0.0
gb|BG241158.1|BG241158 OV1_38_H10.b1_A002 Ovary 1 (OV1) Sor... 638 0.0
gb|BI074873.1|BI074873 IP1_17_A02.g1_A002 Immature pannicle... 638 0.0
gb|BE918547.1|BE918547 OV1_8_C07.b1_A002 Ovary 1 (OV1) Sorg... 601 e-170
gb|CF770673.1|CF770673 DSBF1_9_D02.b1_A010 Drought-stressed... 601 e-170
gb|BG047701.1|BG047701 OV1_26_G03.b1_A002 Ovary 1 (OV1) Sor... 505 e-141
gb|CF770760.1|CF770760 DSBF1_9_D02.g1_A010 Drought-stressed... 476 e-132
gb|BG048661.1|BG048661 OV1_21_D10.b1_A002 Ovary 1 (OV1) Sor... 442 e-122
gb|BG048026.1|BG048026 OV1_26_G03.g1_A002 Ovary 1 (OV1) Sor... 434 e-120
gb|BI075181.1|BI075181 IP1_17_A02.b1_A002 Immature pannicle... 426 e-117
gb|BZ627745.1|BZ627745 ih54g03.g1 WGS-SbicolorF (DH5a methy... 357 9e-097
gb|AW677635.1|AW677635 WS1_10_B01.b1_A002 Water-stressed 1 ... 295 3e-078
gb|AW677759.1|AW677759 WS1_10_B01.g1_A002 Water-stressed 1 ... 295 3e-078
gb|CW242990.1|CW242990 104_702_11219641_116_37563_001 Sorgh... 293 1e-077
gb|BE917965.1|BE917965 OV1_8_C07.g1_A002 Ovary 1 (OV1) Sorg... 250 1e-064
gb|CX608128.1|CX608128 ANR1_32_G07.g1_A002 Anaerobic roots ... 218 5e-055
gb|CX611965.1|CX611965 ANR1_27_F01.g1_A002 Anaerobic roots ... 218 5e-055
gb|DN551858.1|DN551858 pSPR-RT-MR-H1_C06_C262 pSPR Sorghum ... 218 5e-055
gb|CW353735.1|CW353735 fsbb001f016j20k0 Sorghum methylation... 180 1e-043
gb|BQ656077.1|BQ656077 pRC0409 Sorghum halepense rhizome cD... 178 4e-043
gb|CW357147.1|CW357147 fsbb001f023j24k0 Sorghum methylation... 172 3e-041
gb|CF074204.1|CF074204 FE1_23_F08.b1_A002 Iron-deficient se... 170 1e-040
gb|CF430905.1|CF430905 NIT1_1_C04.g1_A002 Nitrogen-deficien... 165 7e-039
gb|CW481091.1|CW481091 fsbb001f240h16f0 Sorghum methylation... 161 1e-037
gb|AI724948.1|AI724948 RHIZ1_31_H01.y3_A001 Rhizome1 (RHIZ1... 133 2e-029
gb|CF675654.1|CF675654 cytB5 Subtractive cDNA library from ... 119 4e-025
gb|BE593285.1|BE593285 WS1_99_H07.g1_A002 Water-stressed 1 ... 103 2e-020
gb|CW101543.1|CW101543 104_469_11004708_148_34411_042 Sorgh... 98 1e-018
gb|BZ421854.1|BZ421854 id46f06.b1 WGS-SbicolorF (DH5a methy... 76 5e-012
gb|CF755930.1|CF755930 DSAF1_2_F09.b1_A011 Drought-stressed... 74 2e-011
gb|CF755994.1|CF755994 DSAF1_2_F09.g1_A011 Drought-stressed... 74 2e-011
gb|CF759156.1|CF759156 DSAF1_41_F12.b1_A011 Drought-stresse... 44 0.017
gb|CL148460.1|CL148460 104_328_10593111_148_31782_235 Sorgh... 42 0.066
gb|CW326965.1|CW326965 104_822_11478495_116_35971_056 Sorgh... 42 0.066
gb|CW411546.1|CW411546 fsbb001f106m09f0 Sorghum methylation... 42 0.066
gb|CW104028.1|CW104028 104_472_11012207_148_34436_082 Sorgh... 40 0.26
gb|CW154188.1|CW154188 104_556_11145451_148_36349_078 Sorgh... 40 0.26
gb|CW177578.1|CW177578 104_591_11159102_148_36609_063 Sorgh... 40 0.26
gb|CW274559.1|CW274559 104_747_11404489_148_35372_007 Sorgh... 40 0.26
gb|CW326721.1|CW326721 104_822_11478367_116_35967_030 Sorgh... 40 0.26
gb|CW326722.1|CW326722 104_822_11478367_148_35966_030 Sorgh... 40 0.26
gb|CW429618.1|CW429618 fsbb001f142p17f0 Sorghum methylation... 40 0.26
gb|CD221037.1|CD221037 CCC1_73_C07.b1_A007 Callus culture/c... 40 0.26
gb|CD224302.1|CD224302 CCC1_33_C06.b1_A007 Callus culture/c... 40 0.26
gb|CD224405.1|CD224405 CCC1_33_C06.g1_A007 Callus culture/c... 40 0.26
gb|CD225703.1|CD225703 CCC1_41_A07.b1_A007 Callus culture/c... 40 0.26
gb|CD226025.1|CD226025 CCC1_43_E03.b1_A007 Callus culture/c... 40 0.26
gb|AY188330.1| Sorghum bicolor phytochelatin synthetase-lik... 40 0.26
gb|CW050436.1|CW050436 104_290_10514658_114_30195 Sorghum m... 38 1.0
gb|CW270536.1|CW270536 104_742_11402479_148_35336_028 Sorgh... 38 1.0
gb|CW321806.1|CW321806 104_815_11475751_116_35947_026 Sorgh... 38 1.0
gb|CW425581.1|CW425581 fsbb001f136i13k0 Sorghum methylation... 38 1.0
gb|CW467689.1|CW467689 fsbb001f219h21f0 Sorghum methylation... 38 1.0
gb|CW471403.1|CW471403 fsbb001f225e08k0 Sorghum methylation... 38 1.0
gb|CL164093.1|CL164093 104_358_10807669_114_31814_037 Sorgh... 36 4.1
gb|CL177698.1|CL177698 104_385_10894012_116_31914_076 Sorgh... 36 4.1
gb|CW072491.1|CW072491 104_325_10592295_114_30537 Sorghum m... 36 4.1
gb|CW086178.1|CW086178 104_429_10946808_116_32518_082 Sorgh... 36 4.1
gb|CW225548.1|CW225548 104_663_11204413_148_37208_059 Sorgh... 36 4.1
gb|CW233154.1|CW233154 104_686_11213222_116_37376_061 Sorgh... 36 4.1
gb|CW250570.1|CW250570 104_712_11223461_148_35054_017 Sorgh... 36 4.1
gb|CW280397.1|CW280397 104_755_11407597_148_35445_053 Sorgh... 36 4.1
gb|CW310604.1|CW310604 104_799_11469801_116_37434_033 Sorgh... 36 4.1
gb|CW320312.1|CW320312 104_813_11474949_116_35898_091 Sorgh... 36 4.1
gb|CW394710.1|CW394710 fsbb001f082h01k0 Sorghum methylation... 36 4.1
gb|CW411597.1|CW411597 fsbb001f106n11k0 Sorghum methylation... 36 4.1
gb|CW416427.1|CW416427 fsbb001f116p12k0 Sorghum methylation... 36 4.1
gb|CW488731.1|CW488731 fsbb001f265e17k0 Sorghum methylation... 36 4.1
gb|AW282711.1|AW282711 LG1_292_G11.g1_A002 Light Grown 1 (L... 36 4.1
gb|AW676965.1|AW676965 DG1_3_E11.b1_A002 Dark Grown 1 (DG1)... 36 4.1
gb|AW677397.1|AW677397 DG1_6_C03.b1_A002 Dark Grown 1 (DG1)... 36 4.1
gb|BE363145.1|BE363145 DG1_9_D12.g1_A002 Dark Grown 1 (DG1)... 36 4.1
gb|BE918660.1|BE918660 FM1_1_A02.g1_A003 Floral-Induced Mer... 36 4.1
gb|BE919239.1|BE919239 FM1_4_H08.g1_A003 Floral-Induced Mer... 36 4.1
gb|BG049708.1|BG049708 EM1_8_B03.g1_A002 Embryo 1 (EM1) Sor... 36 4.1
gb|BG050678.1|BG050678 FM1_71_D09.g1_A003 Floral-Induced Me... 36 4.1
gb|BG053570.1|BG053570 RHIZ2_10_H07.g1_A003 Rhizome2 (RHIZ2... 36 4.1
gb|BG239971.1|BG239971 OV1_31_D03.g1_A002 Ovary 1 (OV1) Sor... 36 4.1
gb|BG240801.1|BG240801 OV1_38_D09.g1_A002 Ovary 1 (OV1) Sor... 36 4.1
gb|BG465376.1|BG465376 EM1_75_F04.g1_A002 Embryo 1 (EM1) So... 36 4.1
gb|BG556210.1|BG556210 EM1_67_B04.g1_A002 Embryo 1 (EM1) So... 36 4.1
gb|BG559423.1|BG559423 RHIZ2_54_F04.b1_A003 Rhizome2 (RHIZ2... 36 4.1
gb|BG559485.1|BG559485 RHIZ2_55_D06.b1_A003 Rhizome2 (RHIZ2... 36 4.1
gb|BG355920.2|BG355920 EM1_18_C09.g1_A002 Embryo 1 (EM1) So... 36 4.1
gb|BM329049.1|BM329049 PIC1_32_G05.g1_A002 Pathogen-infecte... 36 4.1
gb|BM331557.1|BM331557 PIC1_72_F12.g1_A002 Pathogen-infecte... 36 4.1
gb|CD208223.1|CD208223 HS1_32_D06.b1_A012 Heat-shocked seed... 36 4.1
gb|CD211282.1|CD211282 HS1_59_D06.b1_A012 Heat-shocked seed... 36 4.1
gb|CD212400.1|CD212400 HS1_5_E02.b1_A012 Heat-shocked seedl... 36 4.1
gb|CD219645.1|CD219645 CCC1_58_E09.b1_A007 Callus culture/c... 36 4.1
gb|CD219849.1|CD219849 CCC1_59_B06.b1_A007 Callus culture/c... 36 4.1
gb|CD220101.1|CD220101 CCC1_65_B06.b1_A007 Callus culture/c... 36 4.1
gb|CD220446.1|CD220446 CCC1_67_E04.b1_A007 Callus culture/c... 36 4.1
gb|CD221356.1|CD221356 CCC1_54_D05.b1_A007 Callus culture/c... 36 4.1
gb|CD221505.1|CD221505 CCC1_55_E10.b1_A007 Callus culture/c... 36 4.1
gb|CD222503.1|CD222503 CCC1_22_C08.b1_A007 Callus culture/c... 36 4.1
gb|CD222512.1|CD222512 CCC1_22_C05.b1_A007 Callus culture/c... 36 4.1
gb|CD223447.1|CD223447 CCC1_28_B08.b1_A007 Callus culture/c... 36 4.1
gb|CD224331.1|CD224331 CCC1_33_G03.b1_A007 Callus culture/c... 36 4.1
gb|CD224347.1|CD224347 CCC1_33_G09.g1_A007 Callus culture/c... 36 4.1
gb|CD224726.1|CD224726 CCC1_36_C05.b1_A007 Callus culture/c... 36 4.1
gb|CD224731.1|CD224731 CCC1_36_F09.b1_A007 Callus culture/c... 36 4.1
gb|CD225728.1|CD225728 CCC1_41_D02.b1_A007 Callus culture/c... 36 4.1
gb|CD225739.1|CD225739 CCC1_41_A03.b1_A007 Callus culture/c... 36 4.1
gb|CD226634.1|CD226634 CCC1_47_A08.b1_A007 Callus culture/c... 36 4.1
gb|CD226647.1|CD226647 CCC1_47_D09.b1_A007 Callus culture/c... 36 4.1
gb|CD226677.1|CD226677 CCC1_47_D10.b1_A007 Callus culture/c... 36 4.1
gb|CD226682.1|CD226682 CCC1_47_A09.b1_A007 Callus culture/c... 36 4.1
gb|CD227852.1|CD227852 CCC1_56_E02.b1_A007 Callus culture/c... 36 4.1
gb|CD231268.1|CD231268 SS1_15_F10.b1_A012 Salt-stressed see... 36 4.1
gb|CD233938.1|CD233938 SS1_5_D07.b1_A012 Salt-stressed seed... 36 4.1
gb|CD234060.1|CD234060 SS1_6_G07.b1_A012 Salt-stressed seed... 36 4.1
gb|CD234081.1|CD234081 SS1_6_G06.b1_A012 Salt-stressed seed... 36 4.1
gb|CD234106.1|CD234106 SS1_6_G05.b1_A012 Salt-stressed seed... 36 4.1
gb|CD234217.1|CD234217 SS1_26_E03.b1_A012 Salt-stressed see... 36 4.1
gb|CD235978.1|CD235978 SS1_25_A05.b1_A012 Salt-stressed see... 36 4.1
gb|CD235991.1|CD235991 SS1_25_F05.b1_A012 Salt-stressed see... 36 4.1
gb|CD428053.1|CD428053 ETH1_32_G12.b1_A002 Ethylene-treated... 36 4.1
gb|CD430158.1|CD430158 ETH1_17_D11.b1_A002 Ethylene-treated... 36 4.1
gb|CD431164.1|CD431164 ETH1_7_A11.b1_A002 Ethylene-treated ... 36 4.1
gb|CD432088.1|CD432088 ETH1_26_G07.b1_A002 Ethylene-treated... 36 4.1
gb|CD432127.1|CD432127 ETH1_26_H02.b1_A002 Ethylene-treated... 36 4.1
gb|CD461497.1|CD461497 SA1_32_F06.b1_A002 Salicylic acid-tr... 36 4.1
gb|CD462550.1|CD462550 ETH1_38_H07.b1_A002 Ethylene-treated... 36 4.1
gb|CF426862.1|CF426862 PH1_2_A07.b1_A002 Phosphorous-defici... 36 4.1
gb|CF426904.1|CF426904 PH1_2_F06.b1_A002 Phosphorous-defici... 36 4.1
gb|CF428151.1|CF428151 PH1_13_B01.b1_A002 Phosphorous-defic... 36 4.1
gb|CF428268.1|CF428268 PH1_14_H03.b1_A002 Phosphorous-defic... 36 4.1
gb|CF429777.1|CF429777 PH1_24_F04.b1_A002 Phosphorous-defic... 36 4.1
gb|CF431542.1|CF431542 NIT1_8_E10.b1_A002 Nitrogen-deficien... 36 4.1
gb|CF432086.1|CF432086 NIT1_14_F07.b1_A002 Nitrogen-deficie... 36 4.1
gb|CF433427.1|CF433427 NIT1_27_G03.b1_A002 Nitrogen-deficie... 36 4.1
gb|CF481270.1|CF481270 POL1_71_A11.b1_A002 Pollen Sorghum b... 36 4.1
gb|CF481312.1|CF481312 POL1_71_E11.b1_A002 Pollen Sorghum b... 36 4.1
gb|CF481807.1|CF481807 POL1_74_F07.b1_A002 Pollen Sorghum b... 36 4.1
gb|CF483186.1|CF483186 POL1_12_G05.b1_A002 Pollen Sorghum b... 36 4.1
gb|CF485064.1|CF485064 POL1_29_E12.b1_A002 Pollen Sorghum b... 36 4.1
gb|CF487469.1|CF487469 POL1_44_A12.b1_A002 Pollen Sorghum b... 36 4.1
gb|CF488374.1|CF488374 POL1_49_B12.g1_A002 Pollen Sorghum b... 36 4.1
gb|CF489029.1|CF489029 POL1_54_A01.b1_A002 Pollen Sorghum b... 36 4.1
gb|CF489888.1|CF489888 POL1_61_E10.b1_A002 Pollen Sorghum b... 36 4.1
gb|CF756569.1|CF756569 DSAF1_6_G10.b1_A011 Drought-stressed... 36 4.1
gb|CF756645.1|CF756645 DSAF1_6_G10.g1_A011 Drought-stressed... 36 4.1
gb|CF757840.1|CF757840 DSAF1_23_B11.g1_A011 Drought-stresse... 36 4.1
gb|CF758498.1|CF758498 DSAF1_32_F09.g1_A011 Drought-stresse... 36 4.1
gb|CF770965.1|CF770965 DSBF1_12_B11.g1_A010 Drought-stresse... 36 4.1
gb|CF771967.1|CF771967 DSBF1_26_G09.g9_A010 Drought-stresse... 36 4.1
gb|CN124004.1|CN124004 RHOH1_2_B04.b1_A002 Acid- and alkali... 36 4.1
gb|CN124075.1|CN124075 RHOH1_2_B04.g1_A002 Acid- and alkali... 36 4.1
gb|CN125906.1|CN125906 RHOH1_14_C05.b1_A002 Acid- and alkal... 36 4.1
gb|CN130393.1|CN130393 RHOH1_41_E07.b1_A002 Acid- and alkal... 36 4.1
gb|CN130470.1|CN130470 RHOH1_41_E07.g1_A002 Acid- and alkal... 36 4.1
gb|CN130983.1|CN130983 RHOH1_45_D04.b1_A002 Acid- and alkal... 36 4.1
gb|CN133065.1|CN133065 OX1_10_A05.b1_A002 Oxidatively-stres... 36 4.1
gb|CN134743.1|CN134743 OX1_28_E04.b1_A002 Oxidatively-stres... 36 4.1
gb|CN136594.1|CN136594 OX1_44_E01.b1_A002 Oxidatively-stres... 36 4.1
gb|CN136677.1|CN136677 OX1_44_E01.g1_A002 Oxidatively-stres... 36 4.1
gb|CN137284.1|CN137284 OX1_56_G08.b1_A002 Oxidatively-stres... 36 4.1
gb|CN149483.1|CN149483 WOUND1_63_B11.b1_A002 Wounded leaves... 36 4.1
gb|CN149673.1|CN149673 WOUND1_64_E12.b1_A002 Wounded leaves... 36 4.1
gb|CN149955.1|CN149955 WOUND1_66_A12.b1_A002 Wounded leaves... 36 4.1
gb|CN151526.1|CN151526 WOUND1_76_B01.b1_A002 Wounded leaves... 36 4.1
gb|CN152673.1|CN152673 WOUND1_83_B12.g1_A002 Wounded leaves... 36 4.1
gb|CN152750.1|CN152750 WOUND1_84_B06.b1_A002 Wounded leaves... 36 4.1
gb|CX606098.1|CX606098 ANR1_1_D06.b1_A002 Anaerobic roots S... 36 4.1
gb|CX607850.1|CX607850 ANR1_31_D06.b1_A002 Anaerobic roots ... 36 4.1
gb|CX608513.1|CX608513 ANR1_39_B10.b1_A002 Anaerobic roots ... 36 4.1
gb|CX608842.1|CX608842 ANR1_9_C06.b1_A002 Anaerobic roots S... 36 4.1
gb|CX609023.1|CX609023 ANR1_10_E03.b1_A002 Anaerobic roots ... 36 4.1
gb|CX609541.1|CX609541 ANR1_13_G04.b1_A002 Anaerobic roots ... 36 4.1
gb|CX612005.1|CX612005 ANR1_28_A09.b1_A002 Anaerobic roots ... 36 4.1
gb|CX613222.1|CX613222 GABR1_7_A08.b1_A002 GA- or brassinol... 36 4.1
gb|CX620943.1|CX620943 GABR1_55_B08.b1_A002 GA- or brassino... 36 4.1
>gb|BG048965.1|BG048965 OV1_21_D10.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 581
Score = 638 bits (322), Expect = 0.0
Identities = 397/422 (94%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||||||||||||||||||||||| |||||||||||||| |||| |||| |||||| |
Sbjct: 462 actaggcagattccgacttggtgtagatccttacagcgacagccaagcccaatattgcca 403
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 402 gggggaccaaaaactggaggatcttgatgacgaactctggggtcttatcctggttgtagt 343
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| |||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 342 gtggctgcttggggggcgtgtacttcaccttggtgggtattgtggctgcatcaatttcgc 283
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| |||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||
Sbjct: 282 cgactaagtactcgtccatcattgcacgagcagtggtgctgtgccccacatcttcaaaat 223
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
|||| |||||||||||||||||||||||||||||||||||||| ||||||||||| || |
Sbjct: 222 catcagtagcatccttggcagtggaagacagcagaacatcatcacctccagggtggtcat 163
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 162 ccaggaacttggtcacattgtacacctttccgccgatgacgagccagcagtcgtccttgg 103
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttggatcccgacatcctcgtcttcc 593
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 102 tgttgtgcttggccacctcctcgagggtgtacaccttggactccgacatcctcgtcttcc 43
Query: 594 tc 595
||
Sbjct: 42 tc 41
Score = 50.1 bits (25), Expect = 3e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 69 cgacagcaaagactcaagtttcagaattaatga 101
|||||||||||||| ||||||| ||||||||||
Sbjct: 571 cgacagcaaagactgaagtttctgaattaatga 539
>gb|BG240839.1|BG240839 OV1_38_H10.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 607
Score = 638 bits (322), Expect = 0.0
Identities = 397/422 (94%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||||||||||||||||||||||| |||||||||||||| |||| |||| |||||| |
Sbjct: 462 actaggcagattccgacttggtgtagatccttacagcgacagccaagcccaatattgcca 403
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 402 gggggaccaaaaactggaggatcttgatgacgaactctggggtcttatcctggttgtagt 343
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| |||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 342 gtggctgcttggggggcgtgtacttcaccttggtgggtattgtggctgcatcaatttcgc 283
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| |||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||
Sbjct: 282 cgactaagtactcgtccatcattgcacgagcagtggtgctgtgccccacatcttcaaaat 223
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
|||| |||||||||||||||||||||||||||||||||||||| ||||||||||| || |
Sbjct: 222 catcagtagcatccttggcagtggaagacagcagaacatcatcacctccagggtggtcat 163
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 162 ccaggaacttggtcacattgtacacctttccgccgatgacgagccagcagtcgtccttgg 103
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttggatcccgacatcctcgtcttcc 593
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 102 tgttgtgcttggccacctcctcgagggtgtacaccttggactccgacatcctcgtcttcc 43
Query: 594 tc 595
||
Sbjct: 42 tc 41
Score = 50.1 bits (25), Expect = 3e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 69 cgacagcaaagactcaagtttcagaattaatga 101
|||||||||||||| ||||||| ||||||||||
Sbjct: 571 cgacagcaaagactgaagtttctgaattaatga 539
>gb|BG241158.1|BG241158 OV1_38_H10.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 582
Score = 638 bits (322), Expect = 0.0
Identities = 397/422 (94%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||||||||||||||||||||||| |||||||||||||| |||| |||| |||||| |
Sbjct: 567 actaggcagattccgacttggtgtagatccttacagcgacagccaagcccaatattgcca 508
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 507 gggggaccaaaaactggaggatcttgatgacgaactctggggtcttatcctggttgtagt 448
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| |||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 447 gtggctgcttggggggcgtgtacttcaccttggtgggtattgtggctgcatcaatttcgc 388
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| |||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||
Sbjct: 387 cgactaagtactcgtccatcattgcacgagcagtggtgctgtgccccacatcttcaaaat 328
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
|||| |||||||||||||||||||||||||||||||||||||| ||||||||||| || |
Sbjct: 327 catcagtagcatccttggcagtggaagacagcagaacatcatcacctccagggtggtcat 268
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 267 ccaggaacttggtcacattgtacacctttccgccgatgacgagccagcagtcgtccttgg 208
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttggatcccgacatcctcgtcttcc 593
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 207 tgttgtgcttggccacctcctcgagggtgtacaccttggactccgacatcctcgtcttcc 148
Query: 594 tc 595
||
Sbjct: 147 tc 146
>gb|BI074873.1|BI074873 IP1_17_A02.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 603
Score = 638 bits (322), Expect = 0.0
Identities = 397/422 (94%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||||||||||||||||||||||| |||||||||||||| |||| |||| |||||| |
Sbjct: 431 actaggcagattccgacttggtgtagatccttacagcgacagccaagcccaatattgcca 372
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 371 gggggaccaaaaactggaggatcttgatgacgaactctggggtcttatcctggttgtagt 312
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| |||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 311 gtggctgcttggggggcgtgtacttcaccttggtgggtattgtggctgcatcaatttcgc 252
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| |||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||
Sbjct: 251 cgactaagtactcgtccatcattgcacgagcagtggtgctgtgccccacatcttcaaaat 192
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
|||| |||||||||||||||||||||||||||||||||||||| ||||||||||| || |
Sbjct: 191 catcagtagcatccttggcagtggaagacagcagaacatcatcacctccagggtggtcat 132
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 131 ccaggaacttggtcacattgtacacctttccgccgatgacgagccagcagtcgtccttgg 72
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttggatcccgacatcctcgtcttcc 593
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 71 tgttgtgcttggccacctcctcgagggtgtacaccttggactccgacatcctcgtcttcc 12
Query: 594 tc 595
||
Sbjct: 11 tc 10
Score = 50.1 bits (25), Expect = 3e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 69 cgacagcaaagactcaagtttcagaattaatga 101
|||||||||||||| ||||||| ||||||||||
Sbjct: 540 cgacagcaaagactgaagtttctgaattaatga 508
>gb|BE918547.1|BE918547 OV1_8_C07.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 550
Score = 601 bits (303), Expect = e-170
Identities = 386/414 (93%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||||||||||||||||||||||| |||||||||||||| |||| |||| |||||| |
Sbjct: 422 actaggcagattccgacttggtgtagatccttacagcgacagccaagcccaatattgcca 363
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 362 gggggaccaaaaactggaggatcttgatgacgaactctggggtcttatcctggttgtagt 303
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| |||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 302 gtggctgcttggggggcgtgtacttcaccttggtgggtattgtggctgcatcaatttcgc 243
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| |||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||
Sbjct: 242 cgactaagtactcgtccatcattgcacgagcagtggtgctgtgccccacatcttcaaaat 183
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
|||| |||||||||||||||||||||||||||||||||||||| ||||||||||| || |
Sbjct: 182 catcagtagcatccttggcagtggaagacagcagaacatcatcacctccagggtggtcat 123
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 122 ccaggaacttggtcacattgtacacctttccgccgatgacgagccagcagtcgtccttgg 63
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttggatcccgacatcctcg 587
||||||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 62 tgttgtgcttggccacctctcngagggtgtacaccttggactccgacatcctcg 9
Score = 50.1 bits (25), Expect = 3e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 69 cgacagcaaagactcaagtttcagaattaatga 101
|||||||||||||| ||||||| ||||||||||
Sbjct: 531 cgacagcaaagactgaagtttctgaattaatga 499
>gb|CF770673.1|CF770673 DSBF1_9_D02.b1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_9_D02_A010 5', mRNA sequence
Length = 423
Score = 601 bits (303), Expect = e-170
Identities = 378/403 (93%)
Strand = Plus / Minus
Query: 193 ggtgtacatccttacagcgacggccagacccagtattgcgagggggaccaaaaactggag 252
|||||| |||||||||||||| |||| |||| |||||| ||||||||||||||||||||
Sbjct: 423 ggtgtagatccttacagcgacagccaagcccaatattgccagggggaccaaaaactggag 364
Query: 253 gatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttggggggcgt 312
|||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||
Sbjct: 363 gatcttgatgacgaactctggggtcttatcctggttgtagtgtggctgcttggggggcgt 304
Query: 313 gtacttcaccttggtgggtatcgtggctgcatcaatctcacccactaagtactcgtccat 372
||||||||||||||||||||| |||||||||||||| || || |||||||||||||||||
Sbjct: 303 gtacttcaccttggtgggtattgtggctgcatcaatttcgccgactaagtactcgtccat 244
Query: 373 cattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtagcatccttggc 432
||||||||| |||||| ||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 243 cattgcacgagcagtggtgctgtgccccacatcttcaaaatcatcagtagcatccttggc 184
Query: 433 agtggaagacagcagaacatcatcgcctccagggtgatcctccagaaacttggtcacatt 492
|||||||||||||||||||||||| ||||||||||| || ||||| ||||||||||||||
Sbjct: 183 agtggaagacagcagaacatcatcacctccagggtggtcatccaggaacttggtcacatt 124
Query: 493 gtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctc 552
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gtacacctttccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctc 64
Query: 553 ctcgagggtgtacaccttggatcccgacatcctcgtcttcctc 595
||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 63 ctcgagggtgtacaccttggactccgacatcctcgtcttcctc 21
>gb|BG047701.1|BG047701 OV1_26_G03.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 472
Score = 505 bits (255), Expect = e-141
Identities = 306/323 (94%)
Strand = Plus / Minus
Query: 273 gggtcttgtcctggttgtagtgcggctgcttggggggcgtgtacttcaccttggtgggta 332
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 468 gggtcttatcctggttgtagtgtggctgcttggggggcgtgtacttcaccttggtgggta 409
Query: 333 tcgtggctgcatcaatctcacccactaagtactcgtccatcattgcacgggcagtgctgc 392
| |||||||||||||| || || |||||||||||||||||||||||||| |||||| |||
Sbjct: 408 ttgtggctgcatcaatttcgccgactaagtactcgtccatcattgcacgagcagtggtgc 349
Query: 393 tgtgccccacatcttcgaaatcatcggtagcatccttggcagtggaagacagcagaacat 452
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 348 tgtgccccacatcttcaaaatcatcagtagcatccttggcagtggaagacagcagaacat 289
Query: 453 catcgcctccagggtgatcctccagaaacttggtcacattgtacaccttgccgccgatga 512
|||| ||||||||||| || ||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 288 catcacctccagggtggtcatccaggaacttggtcacattgtacacctttccgccgatga 229
Query: 513 cgagccagcagtcgtccttggtgttgtgcttggccacctcctcgagggtgtacaccttgg 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 cgagccagcagtcgtccttggtgttgtgcttggccacctcctcgagggtgtacaccttgg 169
Query: 573 atcccgacatcctcgtcttcctc 595
| ||||||||||||||||||||
Sbjct: 168 actccgacatcctcgtcttcctc 146
>gb|CF770760.1|CF770760 DSBF1_9_D02.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_9_D02_A010 3', mRNA sequence
Length = 519
Score = 476 bits (240), Expect = e-132
Identities = 306/328 (93%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||||||||||||||||||||||| |||||||||||||| |||| |||| |||||| |
Sbjct: 329 actaggcagattccgacttggtgtagatccttacagcgacagccaagcccaatattgcca 270
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 269 gggggaccaaaaactggaggatcttgatgacgaactctggggtcttatcctggttgtagt 210
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| |||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 209 gtggctgcttggggggcgtgtacttcaccttggtgggtattgtggctgcatcaatttcgc 150
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| |||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||
Sbjct: 149 cgactaagtactcgtccatcattgcacgagcagtggtgctgtgccccacatcttcaaaat 90
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
|||| |||||||||||||||||||||||||||||||||||||| ||||||||||| || |
Sbjct: 89 catcagtagcatccttggcagtggaagacagcagaacatcatcacctccagggtggtcat 30
Query: 474 ccagaaacttggtcacattgtacacctt 501
|||| |||||||||||||||||||||||
Sbjct: 29 ccaggaacttggtcacattgtacacctt 2
Score = 50.1 bits (25), Expect = 3e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 69 cgacagcaaagactcaagtttcagaattaatga 101
|||||||||||||| ||||||| ||||||||||
Sbjct: 438 cgacagcaaagactgaagtttctgaattaatga 406
>gb|BG048661.1|BG048661 OV1_21_D10.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 407
Score = 442 bits (223), Expect = e-122
Identities = 274/291 (94%)
Strand = Plus / Minus
Query: 305 gggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcacccactaagtac 364
||||||||||||||||||||||||||||| ||| |||||||||| || || ||||||||
Sbjct: 407 gggggcgtgtacttcaccttggtgggtattgtgcctgcatcaatttcgccggctaagtac 348
Query: 365 tcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtagca 424
||||||||||||||||| |||||| ||||||||||||||||||| |||||||| ||||||
Sbjct: 347 tcgtccatcattgcacgagcagtggtgctgtgccccacatcttcaaaatcatcagtagca 288
Query: 425 tccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaacttg 484
|||||||||||||||||||||||||||||||| ||||||||||| || ||||| ||||||
Sbjct: 287 tccttggcagtggaagacagcagaacatcatcacctccagggtggtcatccaggaacttg 228
Query: 485 gtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttg 544
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 gtcacattgtacacctttccgccgatgacgagccagcagtcgtccttggtgttgtgcttg 168
Query: 545 gccacctcctcgagggtgtacaccttggatcccgacatcctcgtcttcctc 595
||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 167 gccacctcctcgagggtgtacaccttggactccgacatcctcgtcttcctc 117
>gb|BG048026.1|BG048026 OV1_26_G03.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 447
Score = 434 bits (219), Expect = e-120
Identities = 294/319 (92%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||||||||||||||||||||||| |||||||||||||| |||| |||| |||||| |
Sbjct: 328 actaggcagattccgacttggtgtagatccttacagcgacagccaagcccaatattgcca 269
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||
Sbjct: 268 gggggaccaaaaactggaggatcttgatgacgaactctggggtcttatccatgttgtagt 209
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| |||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 208 gtggctgcttggggggcgtgtacttcaccttggtgggtattgtggctgcatcaatttcgc 149
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| |||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||
Sbjct: 148 cgactaagtactcgtccatcattgcacgaccagtggtgctgtgccccacatcttcaaaat 89
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
|||| |||||||||||||||||||||||||||||||||||||| ||||||||||| || |
Sbjct: 88 catcagtagcatccttggcagtggaagacagcagaacatcatcacctccagggtggtcat 29
Query: 474 ccagaaacttggtcacatt 492
|||| ||||||||||||||
Sbjct: 28 ccaggaacttggtcacatt 10
Score = 50.1 bits (25), Expect = 3e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 69 cgacagcaaagactcaagtttcagaattaatga 101
|||||||||||||| ||||||| ||||||||||
Sbjct: 437 cgacagcaaagactgaagtttctgaattaatga 405
>gb|BI075181.1|BI075181 IP1_17_A02.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 520
Score = 426 bits (215), Expect = e-117
Identities = 260/275 (94%)
Strand = Plus / Minus
Query: 321 ccttggtgggtatcgtggctgcatcaatctcacccactaagtactcgtccatcattgcac 380
||||||||||||| |||||||||||||| || || |||||||||||||||||||||||||
Sbjct: 520 ccttggtgggtattgtggctgcatcaatttcgccgactaagtactcgtccatcattgcac 461
Query: 381 gggcagtgctgctgtgccccacatcttcgaaatcatcggtagcatccttggcagtggaag 440
| |||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 460 gagcagtggtgctgtgccccacatcttcaaaatcatcagtagcatccttggcagtggaag 401
Query: 441 acagcagaacatcatcgcctccagggtgatcctccagaaacttggtcacattgtacacct 500
|||||||||||||||| ||||||||||| || ||||| ||||||||||||||||||||||
Sbjct: 400 acagcagaacatcatcacctccagggtggtcatccaggaacttggtcacattgtacacct 341
Query: 501 tgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcctcgaggg 560
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 ttccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcctcgaggg 281
Query: 561 tgtacaccttggatcccgacatcctcgtcttcctc 595
||||||||||||| ||||||||||||||||||||
Sbjct: 280 tgtacaccttggactccgacatcctcgtcttcctc 246
>gb|BZ627745.1|BZ627745 ih54g03.g1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ih54g03 5', DNA sequence
Length = 673
Score = 357 bits (180), Expect = 9e-097
Identities = 234/252 (92%)
Strand = Plus / Minus
Query: 181 agattccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggac 240
|||||||||||||||||| |||||||||||||| |||| |||| |||||| ||||||||
Sbjct: 673 agattccgacttggtgtagatccttacagcgacagccaagcccaatattgccagggggac 614
Query: 241 caaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctg 300
|||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||
Sbjct: 613 caaaaactggaggatcttgatgacgaactctggggtcttatcctggttgtagtgtggctg 554
Query: 301 cttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcacccactaa 360
||||||||||||||||||||||||||||||||| |||||||||||||| || || |||||
Sbjct: 553 cttggggggcgtgtacttcaccttggtgggtattgtggctgcatcaatttcgccgactaa 494
Query: 361 gtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggt 420
||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||| ||
Sbjct: 493 gtactcgtccatcattgcacgagcagtggtgctgtgccccacatcttcaaaatcatcagt 434
Query: 421 agcatccttggc 432
||||||||||||
Sbjct: 433 agcatccttggc 422
Score = 105 bits (53), Expect = 5e-021
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 432 cagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaacttggtcacat 491
||||||||||||||||||||||||| ||||||||||| || ||||| |||||||||||||
Sbjct: 330 cagtggaagacagcagaacatcatcacctccagggtggtcatccaggaacttggtcacat 271
Query: 492 tgtacacct 500
|||||||||
Sbjct: 270 tgtacacct 262
>gb|AW677635.1|AW677635 WS1_10_B01.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 485
Score = 295 bits (149), Expect = 3e-078
Identities = 170/177 (96%)
Strand = Plus / Minus
Query: 419 gtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccaga 478
|||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||
Sbjct: 288 gtagcatccttggcagtggaagacagcagaacatcatcacctccagggtggtcatccagg 229
Query: 479 aacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttg 538
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 228 aacttggtcacattgtacacctttccgccgatgacgagccagcagtcgtccttggtgttg 169
Query: 539 tgcttggccacctcctcgagggtgtacaccttggatcccgacatcctcgtcttcctc 595
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 168 tgcttggccacctcctcgagggtgtacaccttggactccgacatcctcgtcttcctc 112
Score = 50.1 bits (25), Expect = 3e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 69 cgacagcaaagactcaagtttcagaattaatga 101
|||||||||||||| ||||||| ||||||||||
Sbjct: 364 cgacagcaaagactgaagtttctgaattaatga 332
>gb|AW677759.1|AW677759 WS1_10_B01.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 460
Score = 295 bits (149), Expect = 3e-078
Identities = 170/177 (96%)
Strand = Plus / Minus
Query: 419 gtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccaga 478
|||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||
Sbjct: 288 gtagcatccttggcagtggaagacagcagaacatcatcacctccagggtggtcatccagg 229
Query: 479 aacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttg 538
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 228 aacttggtcacattgtacacctttccgccgatgacgagccagcagtcgtccttggtgttg 169
Query: 539 tgcttggccacctcctcgagggtgtacaccttggatcccgacatcctcgtcttcctc 595
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 168 tgcttggccacctcctcgagggtgtacaccttggactccgacatcctcgtcttcctc 112
Score = 50.1 bits (25), Expect = 3e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 69 cgacagcaaagactcaagtttcagaattaatga 101
|||||||||||||| ||||||| ||||||||||
Sbjct: 364 cgacagcaaagactgaagtttctgaattaatga 332
>gb|CW242990.1|CW242990 104_702_11219641_116_37563_001 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11219641, DNA
sequence
Length = 663
Score = 293 bits (148), Expect = 1e-077
Identities = 193/208 (92%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||||||||||||||||||||||| |||||||||||||| |||| |||| |||||| |
Sbjct: 215 actaggcagattccgacttggtgtagatccttacagcgacagccaagcccaatattgcca 156
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 155 gggggaccaaaaactggaggatcttgatgacgaactctggggtcttatcctggttgtagt 96
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 95 gtggctgcttggggggcgtgtacttcaccttggtgggtactgtggctgcatcaatttcgc 36
Query: 354 ccactaagtactcgtccatcattgcacg 381
| ||||||||||||||||||||||||||
Sbjct: 35 cgactaagtactcgtccatcattgcacg 8
Score = 50.1 bits (25), Expect = 3e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 69 cgacagcaaagactcaagtttcagaattaatga 101
|||||||||||||| ||||||| ||||||||||
Sbjct: 324 cgacagcaaagactgaagtttctgaattaatga 292
>gb|BE917965.1|BE917965 OV1_8_C07.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 244
Score = 250 bits (126), Expect = 1e-064
Identities = 159/170 (93%)
Strand = Plus / Minus
Query: 179 gcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcgaggggg 238
|||||||||||||||||||| |||||||||||||| |||| |||| |||||| ||||||
Sbjct: 173 gcagattccgacttggtgtagatccttacagcgacagccaagcccaatattgccaggggg 114
Query: 239 accaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggc 298
|||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||
Sbjct: 113 accaaaaactggaggatcttgatgacgaactctggggtcttatcctggttgtagtgtggc 54
Query: 299 tgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaat 348
||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 53 tgcttggggggcgtgtacttcaccttggtgggtattgtggctgcatcaat 4
>gb|CX608128.1|CX608128 ANR1_32_G07.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_32_G07_A002 5', mRNA sequence
Length = 622
Score = 218 bits (110), Expect = 5e-055
Identities = 200/230 (86%)
Strand = Plus / Minus
Query: 344 tcaatctcacccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccaca 403
||||| ||||| || |||||||| ||||||||||||||||||||| |||||||||| |||
Sbjct: 306 tcaatttcaccgaccaagtactcatccatcattgcacgggcagtgttgctgtgcccgaca 247
Query: 404 tcttcgaaatcatcggtagcatccttggcagtggaagacagcagaacatcatcgcctcca 463
|| ||||||||||| || |||||||| |||| ||||||| |||||||||||| || ||
Sbjct: 246 tcctcgaaatcatcagttgcatccttaccagttgaagacaacagaacatcatcaccccct 187
Query: 464 gggtgatcctccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcag 523
||||| || |||| |||||| ||||||| || |||||||||||||||| |||||||||
Sbjct: 186 gggtggtcttccaaaaacttcgtcacatcatataccttgccgccgatgatgagccagcaa 127
Query: 524 tcgtccttggtgttgtgcttggccacctcctcgagggtgtacaccttgga 573
|| |||||||||||||||||||| || |||||||||||| | ||||||||
Sbjct: 126 tcctccttggtgttgtgcttggcgacgtcctcgagggtgaagaccttgga 77
Score = 149 bits (75), Expect = 4e-034
Identities = 117/131 (89%)
Strand = Plus / Minus
Query: 179 gcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcgaggggg 238
||||| |||||||||||||||||||| || || || ||||| ||||| ||||| |||||
Sbjct: 471 gcagactccgacttggtgtacatcctaacggcaacagccaggcccaggattgccagggga 412
Query: 239 accaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggc 298
||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||
Sbjct: 411 accaaaaactggaggatcttgataacaaactcgggggtcttgtcctggttgtagtgcggt 352
Query: 299 tgcttgggggg 309
|||||||||||
Sbjct: 351 tgcttgggggg 341
>gb|CX611965.1|CX611965 ANR1_27_F01.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_27_F01_A002 5', mRNA sequence
Length = 632
Score = 218 bits (110), Expect = 5e-055
Identities = 200/230 (86%)
Strand = Plus / Minus
Query: 344 tcaatctcacccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccaca 403
||||| ||||| || |||||||| ||||||||||||||||||||| |||||||||| |||
Sbjct: 320 tcaatttcaccgaccaagtactcatccatcattgcacgggcagtgttgctgtgcccgaca 261
Query: 404 tcttcgaaatcatcggtagcatccttggcagtggaagacagcagaacatcatcgcctcca 463
|| ||||||||||| || |||||||| |||| ||||||| |||||||||||| || ||
Sbjct: 260 tcctcgaaatcatcagttgcatccttaccagttgaagacaacagaacatcatcaccccct 201
Query: 464 gggtgatcctccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcag 523
||||| || |||| |||||| ||||||| || |||||||||||||||| |||||||||
Sbjct: 200 gggtggtcttccaaaaacttcgtcacatcatataccttgccgccgatgatgagccagcaa 141
Query: 524 tcgtccttggtgttgtgcttggccacctcctcgagggtgtacaccttgga 573
|| |||||||||||||||||||| || |||||||||||| | ||||||||
Sbjct: 140 tcctccttggtgttgtgcttggcgacgtcctcgagggtgaagaccttgga 91
Score = 149 bits (75), Expect = 4e-034
Identities = 117/131 (89%)
Strand = Plus / Minus
Query: 179 gcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcgaggggg 238
||||| |||||||||||||||||||| || || || ||||| ||||| ||||| |||||
Sbjct: 485 gcagactccgacttggtgtacatcctaacggcaacagccaggcccaggattgccagggga 426
Query: 239 accaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggc 298
||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||
Sbjct: 425 accaaaaactggaggatcttgataacaaactcgggggtcttgtcctggttgtagtgcggt 366
Query: 299 tgcttgggggg 309
|||||||||||
Sbjct: 365 tgcttgggggg 355
>gb|DN551858.1|DN551858 pSPR-RT-MR-H1_C06_C262 pSPR Sorghum propinquum cDNA, mRNA sequence
Length = 708
Score = 218 bits (110), Expect = 5e-055
Identities = 200/230 (86%)
Strand = Plus / Plus
Query: 344 tcaatctcacccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccaca 403
||||| ||||| || |||||||| |||||||| |||||||||||| |||||||||| |||
Sbjct: 396 tcaatttcaccgaccaagtactcatccatcatcgcacgggcagtgttgctgtgcccgaca 455
Query: 404 tcttcgaaatcatcggtagcatccttggcagtggaagacagcagaacatcatcgcctcca 463
|| ||||||||||| || ||||||||| |||| ||||||| |||||||||||| || ||
Sbjct: 456 tcctcgaaatcatcagttgcatccttgccagttgaagacaacagaacatcatcaccccct 515
Query: 464 gggtgatcctccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcag 523
||||| || |||| |||||| ||||||| || |||||||||||||||| |||||||||
Sbjct: 516 gggtggtcttccaaaaacttcgtcacatcatataccttgccgccgatgatgagccagcaa 575
Query: 524 tcgtccttggtgttgtgcttggccacctcctcgagggtgtacaccttgga 573
|| |||||||||||||||||||| || |||||||||||| | ||||||||
Sbjct: 576 tcctccttggtgttgtgcttggcgacgtcctcgagggtgaagaccttgga 625
Score = 149 bits (75), Expect = 4e-034
Identities = 117/131 (89%)
Strand = Plus / Plus
Query: 179 gcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcgaggggg 238
||||| |||||||||||||||||||| || || || ||||| ||||| ||||| |||||
Sbjct: 231 gcagactccgacttggtgtacatcctaacggcaacagccaggcccaggattgccagggga 290
Query: 239 accaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggc 298
||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||
Sbjct: 291 accaaaaactggaggatcttgataacaaactcgggggtcttgtcctggttgtagtgcggt 350
Query: 299 tgcttgggggg 309
|||||||||||
Sbjct: 351 tgcttgggggg 361
>gb|CW353735.1|CW353735 fsbb001f016j20k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f016j20, DNA
sequence
Length = 709
Score = 180 bits (91), Expect = 1e-043
Identities = 121/131 (92%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||||||||||||||||||||||| |||||||||||||| |||| |||| |||||| |
Sbjct: 131 actaggcagattccgacttggtgtagatccttacagcgacagccaagcccaatattgcca 72
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 71 gggggaccaaaaactggaggatcttgatgacgaactctggggtcttatcctggttgtagt 12
Query: 294 gcggctgcttg 304
| |||||||||
Sbjct: 11 gtggctgcttg 1
Score = 50.1 bits (25), Expect = 3e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 69 cgacagcaaagactcaagtttcagaattaatga 101
|||||||||||||| ||||||| ||||||||||
Sbjct: 240 cgacagcaaagactgaagtttctgaattaatga 208
>gb|BQ656077.1|BQ656077 pRC0409 Sorghum halepense rhizome cDNA library Sorghum halepense
cDNA clone pRC0409, mRNA sequence
Length = 496
Score = 178 bits (90), Expect = 4e-043
Identities = 195/230 (84%)
Strand = Plus / Minus
Query: 344 tcaatctcacccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccaca 403
||||| ||||| || |||||||| ||||||||||||||| | ||| | |||||||| |||
Sbjct: 435 tcaatttcaccgaccaagtactcatccatcattgcacggacggtgttactgtgcccaaca 376
Query: 404 tcttcgaaatcatcggtagcatccttggcagtggaagacagcagaacatcatcgcctcca 463
|| ||||||||||| || ||||||||| |||| || ||| |||||||||||| || ||
Sbjct: 375 tcctcgaaatcatcagttgcatccttgccagttgagtacaacagaacatcatcaccccct 316
Query: 464 gggtgatcctccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcag 523
||||| || |||| |||||| ||||||| || |||||||||||||||| |||||||||
Sbjct: 315 gggtggtcttccaaaaacttcgtcacatcatataccttgccgccgatgatgagccagcaa 256
Query: 524 tcgtccttggtgttgtgcttggccacctcctcgagggtgtacaccttgga 573
|| |||||||||||||||||| | || |||||||||||| | ||||||||
Sbjct: 255 tcctccttggtgttgtgcttgacgacgtcctcgagggtgaagaccttgga 206
Score = 36.2 bits (18), Expect = 4.1
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 283 ctggttgtagtgcggctgcttggggg 308
|||||||||||| || ||||||||||
Sbjct: 496 ctggttgtagtgtggttgcttggggg 471
>gb|CW357147.1|CW357147 fsbb001f023j24k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f023j24, DNA
sequence
Length = 728
Score = 172 bits (87), Expect = 3e-041
Identities = 96/99 (96%)
Strand = Plus / Minus
Query: 497 accttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcctcg 556
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 acctttccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcctcg 155
Query: 557 agggtgtacaccttggatcccgacatcctcgtcttcctc 595
||||||||||||||||| ||||||||||||||||||||
Sbjct: 154 agggtgtacaccttggactccgacatcctcgtcttcctc 116
>gb|CF074204.1|CF074204 FE1_23_F08.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_23_F08_A002 3', mRNA sequence
Length = 596
Score = 170 bits (86), Expect = 1e-040
Identities = 164/190 (86%)
Strand = Plus / Minus
Query: 344 tcaatctcacccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccaca 403
||||| ||||| || |||||||| ||||||||||||||||||||| |||||||||| |||
Sbjct: 190 tcaatttcaccgaccaagtactcatccatcattgcacgggcagtgttgctgtgcccgaca 131
Query: 404 tcttcgaaatcatcggtagcatccttggcagtggaagacagcagaacatcatcgcctcca 463
|| ||||||||||| || |||||||| |||| ||||||| |||||||||||| || ||
Sbjct: 130 tcctcgaaatcatcagttgcatccttaccagttgaagacaacagaacatcatcaccccct 71
Query: 464 gggtgatcctccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcag 523
||||| || |||| |||||| ||||||| || |||||||||||||||| |||||||||
Sbjct: 70 gggtggtcttccaaaaacttcgtcacatcatataccttgccgccgatgatgagccagcaa 11
Query: 524 tcgtccttgg 533
|| |||||||
Sbjct: 10 tcctccttgg 1
Score = 149 bits (75), Expect = 4e-034
Identities = 117/131 (89%)
Strand = Plus / Minus
Query: 179 gcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcgaggggg 238
||||| |||||||||||||||||||| || || || ||||| ||||| ||||| |||||
Sbjct: 355 gcagactccgacttggtgtacatcctaacggcaacagccaggcccaggattgccagggga 296
Query: 239 accaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggc 298
||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||
Sbjct: 295 accaaaaactggaggatcttgataacaaactcgggggtcttgtcctggttgtagtgcggt 236
Query: 299 tgcttgggggg 309
|||||||||||
Sbjct: 235 tgcttgggggg 225
>gb|CF430905.1|CF430905 NIT1_1_C04.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_1_C04_A002 5', mRNA sequence
Length = 458
Score = 165 bits (83), Expect = 7e-039
Identities = 95/99 (95%)
Strand = Plus / Minus
Query: 497 accttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcctcg 556
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 acctttccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcctcg 177
Query: 557 agggtgtacaccttggatcccgacatcctcgtcttcctc 595
||||||||||||||||| ||||||||||| ||||||||
Sbjct: 176 agggtgtacaccttggactccgacatcctcatcttcctc 138
>gb|CW481091.1|CW481091 fsbb001f240h16f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f240h16, DNA
sequence
Length = 662
Score = 161 bits (81), Expect = 1e-037
Identities = 118/129 (91%), Gaps = 1/129 (0%)
Strand = Plus / Plus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||||||||||||||||||||||| |||||||||||||| |||| |||| |||||| |
Sbjct: 534 actaggcagattccgacttggtgtagatccttacagcgacagccaagcccaatattgcca 593
Query: 234 ggggg-accaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtag 292
||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 594 ggggggaccaaaaactggaggatcttgatgacgaactctggggtcttatcctggttgtag 653
Query: 293 tgcggctgc 301
|| ||||||
Sbjct: 654 tgtggctgc 662
Score = 50.1 bits (25), Expect = 3e-004
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 69 cgacagcaaagactcaagtttcagaattaatga 101
|||||||||||||| ||||||| ||||||||||
Sbjct: 425 cgacagcaaagactgaagtttctgaattaatga 457
>gb|AI724948.1|AI724948 RHIZ1_31_H01.y3_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 353
Score = 133 bits (67), Expect = 2e-029
Identities = 115/131 (87%)
Strand = Plus / Minus
Query: 179 gcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcgaggggg 238
||||| |||||||||||||||||||| || || || ||||| ||||| |||| |||||
Sbjct: 148 gcagactccgacttggtgtacatcctaacggcaacagccaggcccaggattgtcagggga 89
Query: 239 accaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggc 298
||||||||||||||||||||||| || ||||| |||||||||||||||||||||| ||
Sbjct: 88 accaaaaactggaggatcttgataacaaactcgggggtcttgtcctggttgtagtgtggt 29
Query: 299 tgcttgggggg 309
|||||||||||
Sbjct: 28 tgcttgggggg 18
>gb|CF675654.1|CF675654 cytB5 Subtractive cDNA library from sorghum infested by greenbug
aphids Sorghum bicolor cDNA clone cytB5 similar to
Cytochrome B5, mRNA sequence
Length = 142
Score = 119 bits (60), Expect = 4e-025
Identities = 99/112 (88%)
Strand = Plus / Minus
Query: 198 acatccttacagcgacggccagacccagtattgcgagggggaccaaaaactggaggatct 257
||||||| || || || ||||| ||||| ||||| ||||| |||||||||||||||||||
Sbjct: 142 acatcctaacggcaacagccaggcccaggattgccaggggaaccaaaaactggaggatct 83
Query: 258 tgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttgggggg 309
|||| || ||||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 82 tgataacaaactcgggggtcttgtcctggttgtagtgcggttgcttgggggg 31
>gb|BE593285.1|BE593285 WS1_99_H07.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 181
Score = 103 bits (52), Expect = 2e-020
Identities = 85/96 (88%)
Strand = Plus / Minus
Query: 478 aaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgtt 537
|||||| ||||||| || |||||||||||||||| ||||||||| || |||||||||||
Sbjct: 169 aaacttcgtcacatcatataccttgccgccgatgatgagccagcaatcctccttggtgtt 110
Query: 538 gtgcttggccacctcctcgagggtgtacaccttgga 573
||||||||| || |||||||||||| | ||||||||
Sbjct: 109 gtgcttggcgacatcctcgagggtgaaaaccttgga 74
>gb|CW101543.1|CW101543 104_469_11004708_148_34411_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11004708, DNA
sequence
Length = 379
Score = 97.6 bits (49), Expect = 1e-018
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 497 accttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcctcg 556
|||||||||||||||| ||||||||| || |||||||||||||||||||| || ||||||
Sbjct: 223 accttgccgccgatgatgagccagcaatcctccttggtgttgtgcttggcgacgtcctcg 282
Query: 557 agggtgtacaccttgga 573
|||||| | ||||||||
Sbjct: 283 agggtgaataccttgga 299
>gb|BZ421854.1|BZ421854 id46f06.b1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone id46f06 5', DNA sequence
Length = 669
Score = 75.8 bits (38), Expect = 5e-012
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 497 accttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggc 546
|||||||||||||||| ||||||||| || ||||||||||||||||||||
Sbjct: 620 accttgccgccgatgatgagccagcaatcctccttggtgttgtgcttggc 669
>gb|CF755930.1|CF755930 DSAF1_2_F09.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_2_F09_A011 5', mRNA sequence
Length = 619
Score = 73.8 bits (37), Expect = 2e-011
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 461 ccagggtgatcctccagaaacttggtcacattgtacaccttgccgccgatgacgagccag 520
|||||||| ||||||| ||||||||||||| ||||||||||||||||||| || ||||
Sbjct: 315 ccagggtggtcctccaagaacttggtcacatcatacaccttgccgccgatgatgacccag 256
Query: 521 cagtc 525
|||||
Sbjct: 255 cagtc 251
>gb|CF755994.1|CF755994 DSAF1_2_F09.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_2_F09_A011 3', mRNA sequence
Length = 607
Score = 73.8 bits (37), Expect = 2e-011
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 461 ccagggtgatcctccagaaacttggtcacattgtacaccttgccgccgatgacgagccag 520
|||||||| ||||||| ||||||||||||| ||||||||||||||||||| || ||||
Sbjct: 71 ccagggtggtcctccaagaacttggtcacatcatacaccttgccgccgatgatgacccag 12
Query: 521 cagtc 525
|||||
Sbjct: 11 cagtc 7
>gb|CF759156.1|CF759156 DSAF1_41_F12.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_41_F12_A011 5', mRNA sequence
Length = 512
Score = 44.1 bits (22), Expect = 0.017
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 493 gtacaccttgccgccgatgacgagccagca 522
||||||||||||| |||||| |||||||||
Sbjct: 181 gtacaccttgccggcgatgatgagccagca 152
>gb|CL148460.1|CL148460 104_328_10593111_148_31782_235 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10593111, DNA
sequence
Length = 750
Score = 42.1 bits (21), Expect = 0.066
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 129 ttcagtttgtggatgatgtta 149
|||||||||||||||||||||
Sbjct: 115 ttcagtttgtggatgatgtta 95
>gb|CW326965.1|CW326965 104_822_11478495_116_35971_056 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11478495, DNA
sequence
Length = 530
Score = 42.1 bits (21), Expect = 0.066
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 129 ttcagtttgtggatgatgtta 149
|||||||||||||||||||||
Sbjct: 102 ttcagtttgtggatgatgtta 122
>gb|CW411546.1|CW411546 fsbb001f106m09f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f106m09, DNA
sequence
Length = 787
Score = 42.1 bits (21), Expect = 0.066
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 129 ttcagtttgtggatgatgtta 149
|||||||||||||||||||||
Sbjct: 323 ttcagtttgtggatgatgtta 343
>gb|CW104028.1|CW104028 104_472_11012207_148_34436_082 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11012207, DNA
sequence
Length = 692
Score = 40.1 bits (20), Expect = 0.26
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 497 accttgccgccgatgacgagccagcagtcgtc 528
||||||||| ||| ||||| ||||||||||||
Sbjct: 452 accttgccgtcgacgacgacccagcagtcgtc 421
>gb|CW154188.1|CW154188 104_556_11145451_148_36349_078 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11145451, DNA
sequence
Length = 700
Score = 40.1 bits (20), Expect = 0.26
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 497 accttgccgccgatgacgagccagcagtcgtc 528
||||||||| ||| ||||| ||||||||||||
Sbjct: 411 accttgccgtcgacgacgacccagcagtcgtc 380
>gb|CW177578.1|CW177578 104_591_11159102_148_36609_063 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11159102, DNA
sequence
Length = 603
Score = 40.1 bits (20), Expect = 0.26
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 498 ccttgccgccgatgacgagccagcagtc 525
||||||||||||||| || |||||||||
Sbjct: 111 ccttgccgccgatgatgacccagcagtc 138
>gb|CW274559.1|CW274559 104_747_11404489_148_35372_007 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11404489, DNA
sequence
Length = 659
Score = 40.1 bits (20), Expect = 0.26
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 498 ccttgccgccgatgacgagccagcagtc 525
||||||||||||||| || |||||||||
Sbjct: 602 ccttgccgccgatgatgacccagcagtc 629
Score = 40.1 bits (20), Expect = 0.26
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 461 ccagggtgatcctccagaaacttggtcacattgtacacct 500
|||||||| ||||||| ||||||||||||| |||||||
Sbjct: 446 ccagggtggtcctccaagaacttggtcacatcatacacct 485
>gb|CW326721.1|CW326721 104_822_11478367_116_35967_030 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11478367, DNA
sequence
Length = 728
Score = 40.1 bits (20), Expect = 0.26
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 497 accttgccgccgatgacgagccagcagtcgtc 528
||||||||| ||| ||||| ||||||||||||
Sbjct: 278 accttgccgtcgacgacgacccagcagtcgtc 309
>gb|CW326722.1|CW326722 104_822_11478367_148_35966_030 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11478367, DNA
sequence
Length = 670
Score = 40.1 bits (20), Expect = 0.26
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 497 accttgccgccgatgacgagccagcagtcgtc 528
||||||||| ||| ||||| ||||||||||||
Sbjct: 590 accttgccgtcgacgacgacccagcagtcgtc 559
>gb|CW429618.1|CW429618 fsbb001f142p17f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f142p17, DNA
sequence
Length = 766
Score = 40.1 bits (20), Expect = 0.26
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 497 accttgccgccgatgacgagccagcagtcgtc 528
||||||||| ||| ||||| ||||||||||||
Sbjct: 124 accttgccgtcgacgacgacccagcagtcgtc 93
>gb|CD221037.1|CD221037 CCC1_73_C07.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_73_C07_A007 3', mRNA sequence
Length = 667
Score = 40.1 bits (20), Expect = 0.26
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 602 cggtcagggtggaggaggcggagg 625
||||||||||||||| ||||||||
Sbjct: 20 cggtcagggtggaggtggcggagg 43
>gb|CD224302.1|CD224302 CCC1_33_C06.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_33_C06_A007 3', mRNA sequence
Length = 633
Score = 40.1 bits (20), Expect = 0.26
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 602 cggtcagggtggaggaggcggagg 625
||||||||||||||| ||||||||
Sbjct: 9 cggtcagggtggaggtggcggagg 32
>gb|CD224405.1|CD224405 CCC1_33_C06.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_33_C06_A007 5', mRNA sequence
Length = 329
Score = 40.1 bits (20), Expect = 0.26
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 602 cggtcagggtggaggaggcggagg 625
||||||||||||||| ||||||||
Sbjct: 269 cggtcagggtggaggtggcggagg 292
>gb|CD225703.1|CD225703 CCC1_41_A07.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_41_A07_A007 3', mRNA sequence
Length = 662
Score = 40.1 bits (20), Expect = 0.26
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 602 cggtcagggtggaggaggcggagg 625
||||||||||||||| ||||||||
Sbjct: 20 cggtcagggtggaggtggcggagg 43
>gb|CD226025.1|CD226025 CCC1_43_E03.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_43_E03_A007 3', mRNA sequence
Length = 641
Score = 40.1 bits (20), Expect = 0.26
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 602 cggtcagggtggaggaggcggagg 625
||||||||||||||| ||||||||
Sbjct: 9 cggtcagggtggaggtggcggagg 32
>gb|AY188330.1| Sorghum bicolor phytochelatin synthetase-like protein 1, phytochelatin
synthetase-like protein 2, and cytochrome b5 (Cyb5) genes,
complete cds; and MADS box protein AGLG1 (Aglg1) gene,
partial cds
Length = 23102
Score = 40.1 bits (20), Expect = 0.26
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 497 accttgccgccgatgacgagccagcagtcgtc 528
||||||||| ||| ||||| ||||||||||||
Sbjct: 14586 accttgccgtcgacgacgacccagcagtcgtc 14617
>gb|CW050436.1|CW050436 104_290_10514658_114_30195 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10514658, DNA
sequence
Length = 230
Score = 38.2 bits (19), Expect = 1.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 610 gtggaggaggcggaggcga 628
|||||||||||||||||||
Sbjct: 210 gtggaggaggcggaggcga 228
>gb|CW270536.1|CW270536 104_742_11402479_148_35336_028 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11402479, DNA
sequence
Length = 563
Score = 38.2 bits (19), Expect = 1.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 610 gtggaggaggcggaggcga 628
|||||||||||||||||||
Sbjct: 86 gtggaggaggcggaggcga 68
>gb|CW321806.1|CW321806 104_815_11475751_116_35947_026 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11475751, DNA
sequence
Length = 626
Score = 38.2 bits (19), Expect = 1.0
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 523 gtcgtccttggtgttgtgcttgg 545
|||||||||||||||||| ||||
Sbjct: 210 gtcgtccttggtgttgtggttgg 188
>gb|CW425581.1|CW425581 fsbb001f136i13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f136i13, DNA
sequence
Length = 353
Score = 38.2 bits (19), Expect = 1.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 161 ggtggaggaggcggaggcg 179
>gb|CW467689.1|CW467689 fsbb001f219h21f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f219h21, DNA
sequence
Length = 514
Score = 38.2 bits (19), Expect = 1.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 610 gtggaggaggcggaggcga 628
|||||||||||||||||||
Sbjct: 264 gtggaggaggcggaggcga 246
>gb|CW471403.1|CW471403 fsbb001f225e08k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f225e08, DNA
sequence
Length = 343
Score = 38.2 bits (19), Expect = 1.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 610 gtggaggaggcggaggcga 628
|||||||||||||||||||
Sbjct: 263 gtggaggaggcggaggcga 245
>gb|CL164093.1|CL164093 104_358_10807669_114_31814_037 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10807669, DNA
sequence
Length = 292
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 609 ggtggaggaggcggaggc 626
||||||||||||||||||
Sbjct: 29 ggtggaggaggcggaggc 46
>gb|CL177698.1|CL177698 104_385_10894012_116_31914_076 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10894012, DNA
sequence
Length = 266
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 141 atgatgttatgtttgcag 158
||||||||||||||||||
Sbjct: 59 atgatgttatgtttgcag 42
>gb|CW072491.1|CW072491 104_325_10592295_114_30537 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10592295, DNA
sequence
Length = 201
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 609 ggtggaggaggcggaggc 626
||||||||||||||||||
Sbjct: 172 ggtggaggaggcggaggc 189
>gb|CW086178.1|CW086178 104_429_10946808_116_32518_082 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10946808, DNA
sequence
Length = 601
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 615 ggaggcggaggcgaggac 632
||||||||||||||||||
Sbjct: 360 ggaggcggaggcgaggac 343
>gb|CW225548.1|CW225548 104_663_11204413_148_37208_059 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11204413, DNA
sequence
Length = 643
Score = 36.2 bits (18), Expect = 4.1
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 608 gggtggaggaggcggaggcgag 629
||||| ||||||||||||||||
Sbjct: 463 gggtgtaggaggcggaggcgag 442
>gb|CW233154.1|CW233154 104_686_11213222_116_37376_061 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11213222, DNA
sequence
Length = 709
Score = 36.2 bits (18), Expect = 4.1
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 81 ctcaagtttcagaattaatgat 102
|||||||| |||||||||||||
Sbjct: 42 ctcaagttgcagaattaatgat 63
>gb|CW250570.1|CW250570 104_712_11223461_148_35054_017 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11223461, DNA
sequence
Length = 669
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 141 atgatgttatgtttgcag 158
||||||||||||||||||
Sbjct: 250 atgatgttatgtttgcag 267
>gb|CW280397.1|CW280397 104_755_11407597_148_35445_053 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11407597, DNA
sequence
Length = 513
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 615 ggaggcggaggcgaggac 632
||||||||||||||||||
Sbjct: 56 ggaggcggaggcgaggac 39
>gb|CW310604.1|CW310604 104_799_11469801_116_37434_033 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11469801, DNA
sequence
Length = 693
Score = 36.2 bits (18), Expect = 4.1
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcgagg 630
||||||||||| ||||||||||
Sbjct: 475 ggtggaggaggtggaggcgagg 454
>gb|CW320312.1|CW320312 104_813_11474949_116_35898_091 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11474949, DNA
sequence
Length = 503
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 608 gggtggaggaggcggagg 625
||||||||||||||||||
Sbjct: 249 gggtggaggaggcggagg 266
>gb|CW394710.1|CW394710 fsbb001f082h01k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f082h01, DNA
sequence
Length = 532
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 215 tgctgctgtgccccacat 198
>gb|CW411597.1|CW411597 fsbb001f106n11k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f106n11, DNA
sequence
Length = 695
Score = 36.2 bits (18), Expect = 4.1
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 608 gggtggaggaggcggaggcgag 629
||||| ||||||||||||||||
Sbjct: 178 gggtgtaggaggcggaggcgag 199
>gb|CW416427.1|CW416427 fsbb001f116p12k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f116p12, DNA
sequence
Length = 707
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 343 atcaatctcacccactaa 360
||||||||||||||||||
Sbjct: 233 atcaatctcacccactaa 250
>gb|CW488731.1|CW488731 fsbb001f265e17k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f265e17, DNA
sequence
Length = 647
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 523 gtcgtccttggtgttgtg 540
||||||||||||||||||
Sbjct: 76 gtcgtccttggtgttgtg 59
>gb|AW282711.1|AW282711 LG1_292_G11.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 506
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 78 tgctgctgtgccccacat 95
>gb|AW676965.1|AW676965 DG1_3_E11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 475
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 610 gtggaggaggcggaggcg 627
||||||||||||||||||
Sbjct: 350 gtggaggaggcggaggcg 367
>gb|AW677397.1|AW677397 DG1_6_C03.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 428
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 610 gtggaggaggcggaggcg 627
||||||||||||||||||
Sbjct: 103 gtggaggaggcggaggcg 120
>gb|BE363145.1|BE363145 DG1_9_D12.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 383
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 229 tgctgctgtgccccacat 246
>gb|BE918660.1|BE918660 FM1_1_A02.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 465
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 215 tgctgctgtgccccacat 232
>gb|BE919239.1|BE919239 FM1_4_H08.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 571
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 182 tgctgctgtgccccacat 199
>gb|BG049708.1|BG049708 EM1_8_B03.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 494
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 67 tgctgctgtgccccacat 84
>gb|BG050678.1|BG050678 FM1_71_D09.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 587
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 193 tgctgctgtgccccacat 210
>gb|BG053570.1|BG053570 RHIZ2_10_H07.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 505
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 77 tgctgctgtgccccacat 94
>gb|BG239971.1|BG239971 OV1_31_D03.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 382
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 70 tgctgctgtgccccacat 87
>gb|BG240801.1|BG240801 OV1_38_D09.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 609
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 226 tgctgctgtgccccacat 243
>gb|BG465376.1|BG465376 EM1_75_F04.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 472
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 67 tgctgctgtgccccacat 84
>gb|BG556210.1|BG556210 EM1_67_B04.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 599
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 208 tgctgctgtgccccacat 225
>gb|BG559423.1|BG559423 RHIZ2_54_F04.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 396
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 612 ggaggaggcggaggcgag 629
||||||||||||||||||
Sbjct: 88 ggaggaggcggaggcgag 71
>gb|BG559485.1|BG559485 RHIZ2_55_D06.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 412
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 610 gtggaggaggcggaggcg 627
||||||||||||||||||
Sbjct: 94 gtggaggaggcggaggcg 111
>gb|BG355920.2|BG355920 EM1_18_C09.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 626
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 234 tgctgctgtgccccacat 251
>gb|BM329049.1|BM329049 PIC1_32_G05.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 575
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 147 tgctgctgtgccccacat 164
>gb|BM331557.1|BM331557 PIC1_72_F12.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 577
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 148 tgctgctgtgccccacat 165
>gb|CD208223.1|CD208223 HS1_32_D06.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_32_D06_A012 3', mRNA sequence
Length = 557
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 142 tgctgctgtgccccacat 159
>gb|CD211282.1|CD211282 HS1_59_D06.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_59_D06_A012 3', mRNA sequence
Length = 579
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 116 tgctgctgtgccccacat 133
>gb|CD212400.1|CD212400 HS1_5_E02.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_5_E02_A012 3', mRNA sequence
Length = 508
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 81 tgctgctgtgccccacat 98
>gb|CD219645.1|CD219645 CCC1_58_E09.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_58_E09_A007 3', mRNA sequence
Length = 643
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 228 tgctgctgtgccccacat 245
>gb|CD219849.1|CD219849 CCC1_59_B06.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_59_B06_A007 3', mRNA sequence
Length = 643
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 228 tgctgctgtgccccacat 245
>gb|CD220101.1|CD220101 CCC1_65_B06.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_65_B06_A007 3', mRNA sequence
Length = 652
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 236 tgctgctgtgccccacat 253
>gb|CD220446.1|CD220446 CCC1_67_E04.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_67_E04_A007 3', mRNA sequence
Length = 644
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 228 tgctgctgtgccccacat 245
>gb|CD221356.1|CD221356 CCC1_54_D05.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_54_D05_A007 3', mRNA sequence
Length = 643
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 228 tgctgctgtgccccacat 245
>gb|CD221505.1|CD221505 CCC1_55_E10.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_55_E10_A007 3', mRNA sequence
Length = 644
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 228 tgctgctgtgccccacat 245
>gb|CD222503.1|CD222503 CCC1_22_C08.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_22_C08_A007 3', mRNA sequence
Length = 647
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 232 tgctgctgtgccccacat 249
>gb|CD222512.1|CD222512 CCC1_22_C05.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_22_C05_A007 3', mRNA sequence
Length = 608
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 192 tgctgctgtgccccacat 209
>gb|CD223447.1|CD223447 CCC1_28_B08.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_28_B08_A007 3', mRNA sequence
Length = 638
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 228 tgctgctgtgccccacat 245
>gb|CD224331.1|CD224331 CCC1_33_G03.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_33_G03_A007 3', mRNA sequence
Length = 638
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 564 tgctgctgtgccccacat 581
>gb|CD224347.1|CD224347 CCC1_33_G09.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_33_G09_A007 5', mRNA sequence
Length = 605
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 610 gtggaggaggcggaggcg 627
||||||||||||||||||
Sbjct: 314 gtggaggaggcggaggcg 331
>gb|CD224726.1|CD224726 CCC1_36_C05.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_36_C05_A007 3', mRNA sequence
Length = 634
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 224 tgctgctgtgccccacat 241
>gb|CD224731.1|CD224731 CCC1_36_F09.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_36_F09_A007 3', mRNA sequence
Length = 640
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 225 tgctgctgtgccccacat 242
>gb|CD225728.1|CD225728 CCC1_41_D02.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_41_D02_A007 3', mRNA sequence
Length = 602
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 181 tgctgctgtgccccacat 198
>gb|CD225739.1|CD225739 CCC1_41_A03.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_41_A03_A007 3', mRNA sequence
Length = 561
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 142 tgctgctgtgccccacat 159
>gb|CD226634.1|CD226634 CCC1_47_A08.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_47_A08_A007 3', mRNA sequence
Length = 644
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 228 tgctgctgtgccccacat 245
>gb|CD226647.1|CD226647 CCC1_47_D09.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_47_D09_A007 3', mRNA sequence
Length = 663
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 142 tgctgctgtgccccacat 159
>gb|CD226677.1|CD226677 CCC1_47_D10.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_47_D10_A007 3', mRNA sequence
Length = 607
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 191 tgctgctgtgccccacat 208
>gb|CD226682.1|CD226682 CCC1_47_A09.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_47_A09_A007 3', mRNA sequence
Length = 639
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 228 tgctgctgtgccccacat 245
>gb|CD227852.1|CD227852 CCC1_56_E02.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_56_E02_A007 3', mRNA sequence
Length = 478
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 67 tgctgctgtgccccacat 84
>gb|CD231268.1|CD231268 SS1_15_F10.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_15_F10_A012 3', mRNA sequence
Length = 637
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 228 tgctgctgtgccccacat 245
>gb|CD233938.1|CD233938 SS1_5_D07.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_5_D07_A012 3', mRNA sequence
Length = 638
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 228 tgctgctgtgccccacat 245
>gb|CD234060.1|CD234060 SS1_6_G07.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_6_G07_A012 3', mRNA sequence
Length = 654
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 228 tgctgctgtgccccacat 245
>gb|CD234081.1|CD234081 SS1_6_G06.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_6_G06_A012 3', mRNA sequence
Length = 655
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 228 tgctgctgtgccccacat 245
>gb|CD234106.1|CD234106 SS1_6_G05.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_6_G05_A012 3', mRNA sequence
Length = 500
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 72 tgctgctgtgccccacat 89
>gb|CD234217.1|CD234217 SS1_26_E03.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_26_E03_A012 3', mRNA sequence
Length = 593
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 199 tgctgctgtgccccacat 216
>gb|CD235978.1|CD235978 SS1_25_A05.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_25_A05_A012 3', mRNA sequence
Length = 560
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 142 tgctgctgtgccccacat 159
>gb|CD235991.1|CD235991 SS1_25_F05.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_25_F05_A012 3', mRNA sequence
Length = 661
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 235 tgctgctgtgccccacat 252
>gb|CD428053.1|CD428053 ETH1_32_G12.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_32_G12_A002 3', mRNA sequence
Length = 684
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 265 tgctgctgtgccccacat 282
>gb|CD430158.1|CD430158 ETH1_17_D11.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_17_D11_A002 3', mRNA sequence
Length = 681
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 262 tgctgctgtgccccacat 279
>gb|CD431164.1|CD431164 ETH1_7_A11.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_7_A11_A002 3', mRNA sequence
Length = 557
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 142 tgctgctgtgccccacat 159
>gb|CD432088.1|CD432088 ETH1_26_G07.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_26_G07_A002 3', mRNA sequence
Length = 607
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 186 tgctgctgtgccccacat 203
>gb|CD432127.1|CD432127 ETH1_26_H02.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_26_H02_A002 3', mRNA sequence
Length = 599
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 180 tgctgctgtgccccacat 197
>gb|CD461497.1|CD461497 SA1_32_F06.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_32_F06_A002 3', mRNA sequence
Length = 572
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 141 atgatgttatgtttgcag 158
||||||||||||||||||
Sbjct: 480 atgatgttatgtttgcag 497
>gb|CD462550.1|CD462550 ETH1_38_H07.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_38_H07_A002 3', mRNA sequence
Length = 647
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 228 tgctgctgtgccccacat 245
>gb|CF426862.1|CF426862 PH1_2_A07.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_2_A07_A002 3', mRNA sequence
Length = 587
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 142 tgctgctgtgccccacat 159
>gb|CF426904.1|CF426904 PH1_2_F06.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_2_F06_A002 3', mRNA sequence
Length = 555
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 134 tgctgctgtgccccacat 151
>gb|CF428151.1|CF428151 PH1_13_B01.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_13_B01_A002 3', mRNA sequence
Length = 485
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 80 tgctgctgtgccccacat 97
>gb|CF428268.1|CF428268 PH1_14_H03.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_14_H03_A002 3', mRNA sequence
Length = 605
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 184 tgctgctgtgccccacat 201
>gb|CF429777.1|CF429777 PH1_24_F04.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_24_F04_A002 3', mRNA sequence
Length = 653
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 226 tgctgctgtgccccacat 243
>gb|CF431542.1|CF431542 NIT1_8_E10.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_8_E10_A002 3', mRNA sequence
Length = 556
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 142 tgctgctgtgccccacat 159
>gb|CF432086.1|CF432086 NIT1_14_F07.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_14_F07_A002 3', mRNA sequence
Length = 502
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 81 tgctgctgtgccccacat 98
>gb|CF433427.1|CF433427 NIT1_27_G03.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_27_G03_A002 3', mRNA sequence
Length = 689
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 262 tgctgctgtgccccacat 279
>gb|CF481270.1|CF481270 POL1_71_A11.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_71_A11_A002 3', mRNA sequence
Length = 456
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 27 tgctgctgtgccccacat 44
>gb|CF481312.1|CF481312 POL1_71_E11.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_71_E11_A002 3', mRNA sequence
Length = 553
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 125 tgctgctgtgccccacat 142
>gb|CF481807.1|CF481807 POL1_74_F07.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_74_F07_A002 3', mRNA sequence
Length = 654
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 227 tgctgctgtgccccacat 244
>gb|CF483186.1|CF483186 POL1_12_G05.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_12_G05_A002 3', mRNA sequence
Length = 566
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 142 tgctgctgtgccccacat 159
>gb|CF485064.1|CF485064 POL1_29_E12.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_29_E12_A002 3', mRNA sequence
Length = 610
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 182 tgctgctgtgccccacat 199
>gb|CF487469.1|CF487469 POL1_44_A12.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_44_A12_A002 3', mRNA sequence
Length = 614
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 186 tgctgctgtgccccacat 203
>gb|CF488374.1|CF488374 POL1_49_B12.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_49_B12_A002 5', mRNA sequence
Length = 683
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 615 ggaggcggaggcgaggac 632
||||||||||||||||||
Sbjct: 587 ggaggcggaggcgaggac 604
>gb|CF489029.1|CF489029 POL1_54_A01.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_54_A01_A002 3', mRNA sequence
Length = 519
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 125 tgctgctgtgccccacat 142
>gb|CF489888.1|CF489888 POL1_61_E10.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_61_E10_A002 3', mRNA sequence
Length = 673
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 252 tgctgctgtgccccacat 269
>gb|CF756569.1|CF756569 DSAF1_6_G10.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_6_G10_A011 5', mRNA sequence
Length = 532
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 117 tgctgctgtgccccacat 134
>gb|CF756645.1|CF756645 DSAF1_6_G10.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_6_G10_A011 3', mRNA sequence
Length = 522
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 117 tgctgctgtgccccacat 134
>gb|CF757840.1|CF757840 DSAF1_23_B11.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_23_B11_A011 3', mRNA sequence
Length = 520
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 117 tgctgctgtgccccacat 134
>gb|CF758498.1|CF758498 DSAF1_32_F09.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_32_F09_A011 3', mRNA sequence
Length = 496
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 14 tgctgctgtgccccacat 31
>gb|CF770965.1|CF770965 DSBF1_12_B11.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_12_B11_A010 3', mRNA sequence
Length = 530
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 126 tgctgctgtgccccacat 143
>gb|CF771967.1|CF771967 DSBF1_26_G09.g9_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_26_G09_A010 3', mRNA sequence
Length = 596
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 192 tgctgctgtgccccacat 209
>gb|CN124004.1|CN124004 RHOH1_2_B04.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_2_B04_A002 3', mRNA sequence
Length = 641
Score = 36.2 bits (18), Expect = 4.1
Identities = 69/86 (80%)
Strand = Plus / Minus
Query: 443 agcagaacatcatcgcctccagggtgatcctccagaaacttggtcacattgtacaccttg 502
||||||||||| | || ||||| || || |||| | |||||||||| | || | ||||
Sbjct: 188 agcagaacatcggcacccccaggatggtcttccaaatacttggtcacgtcataaatcttg 129
Query: 503 ccgccgatgacgagccagcagtcgtc 528
||| ||| ||||| ||||||||||||
Sbjct: 128 ccgtcgacgacgacccagcagtcgtc 103
>gb|CN124075.1|CN124075 RHOH1_2_B04.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_2_B04_A002 5', mRNA sequence
Length = 535
Score = 36.2 bits (18), Expect = 4.1
Identities = 69/86 (80%)
Strand = Plus / Minus
Query: 443 agcagaacatcatcgcctccagggtgatcctccagaaacttggtcacattgtacaccttg 502
||||||||||| | || ||||| || || |||| | |||||||||| | || | ||||
Sbjct: 288 agcagaacatcggcacccccaggatggtcttccaaatacttggtcacgtcataaatcttg 229
Query: 503 ccgccgatgacgagccagcagtcgtc 528
||| ||| ||||| ||||||||||||
Sbjct: 228 ccgtcgacgacgacccagcagtcgtc 203
>gb|CN125906.1|CN125906 RHOH1_14_C05.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_14_C05_A002 3', mRNA sequence
Length = 838
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 411 tgctgctgtgccccacat 428
>gb|CN130393.1|CN130393 RHOH1_41_E07.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_41_E07_A002 3', mRNA sequence
Length = 812
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 394 tgctgctgtgccccacat 411
>gb|CN130470.1|CN130470 RHOH1_41_E07.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_41_E07_A002 5', mRNA sequence
Length = 810
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 736 tgctgctgtgccccacat 753
>gb|CN130983.1|CN130983 RHOH1_45_D04.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_45_D04_A002 3', mRNA sequence
Length = 676
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 258 tgctgctgtgccccacat 275
>gb|CN133065.1|CN133065 OX1_10_A05.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_10_A05_A002 3', mRNA sequence
Length = 507
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 241 caaaaactggaggatctt 258
||||||||||||||||||
Sbjct: 280 caaaaactggaggatctt 263
>gb|CN134743.1|CN134743 OX1_28_E04.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_28_E04_A002 3', mRNA sequence
Length = 843
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 412 tgctgctgtgccccacat 429
>gb|CN136594.1|CN136594 OX1_44_E01.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_44_E01_A002 3', mRNA sequence
Length = 725
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 306 tgctgctgtgccccacat 323
>gb|CN136677.1|CN136677 OX1_44_E01.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_44_E01_A002 5', mRNA sequence
Length = 850
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 832 tgctgctgtgccccacat 849
>gb|CN137284.1|CN137284 OX1_56_G08.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_56_G08_A002 3', mRNA sequence
Length = 725
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 311 tgctgctgtgccccacat 328
>gb|CN149483.1|CN149483 WOUND1_63_B11.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_63_B11_A002 3', mRNA sequence
Length = 781
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 360 tgctgctgtgccccacat 377
>gb|CN149673.1|CN149673 WOUND1_64_E12.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_64_E12_A002 3', mRNA sequence
Length = 703
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 288 tgctgctgtgccccacat 305
>gb|CN149955.1|CN149955 WOUND1_66_A12.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_66_A12_A002 3', mRNA sequence
Length = 766
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 350 tgctgctgtgccccacat 367
>gb|CN151526.1|CN151526 WOUND1_76_B01.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_76_B01_A002 3', mRNA sequence
Length = 827
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 404 tgctgctgtgccccacat 421
>gb|CN152673.1|CN152673 WOUND1_83_B12.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_83_B12_A002 5', mRNA sequence
Length = 864
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 832 tgctgctgtgccccacat 849
>gb|CN152750.1|CN152750 WOUND1_84_B06.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_84_B06_A002 3', mRNA sequence
Length = 831
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 405 tgctgctgtgccccacat 422
>gb|CX606098.1|CX606098 ANR1_1_D06.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_1_D06_A002 3', mRNA sequence
Length = 717
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 290 tgctgctgtgccccacat 307
>gb|CX607850.1|CX607850 ANR1_31_D06.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_31_D06_A002 3', mRNA sequence
Length = 781
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 381 tgctgctgtgccccacat 398
>gb|CX608513.1|CX608513 ANR1_39_B10.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_39_B10_A002 3', mRNA sequence
Length = 648
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 222 tgctgctgtgccccacat 239
>gb|CX608842.1|CX608842 ANR1_9_C06.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_9_C06_A002 3', mRNA sequence
Length = 764
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 346 tgctgctgtgccccacat 363
>gb|CX609023.1|CX609023 ANR1_10_E03.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_10_E03_A002 3', mRNA sequence
Length = 791
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 366 tgctgctgtgccccacat 383
>gb|CX609541.1|CX609541 ANR1_13_G04.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_13_G04_A002 3', mRNA sequence
Length = 856
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 430 tgctgctgtgccccacat 447
>gb|CX612005.1|CX612005 ANR1_28_A09.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_28_A09_A002 3', mRNA sequence
Length = 771
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 351 tgctgctgtgccccacat 368
>gb|CX613222.1|CX613222 GABR1_7_A08.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_7_A08_A002 3', mRNA sequence
Length = 711
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 293 tgctgctgtgccccacat 310
>gb|CX620943.1|CX620943 GABR1_55_B08.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_55_B08_A002 3', mRNA sequence
Length = 685
Score = 36.2 bits (18), Expect = 4.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 387 tgctgctgtgccccacat 404
||||||||||||||||||
Sbjct: 237 tgctgctgtgccccacat 254
Database: Sorghum_nucl_with_EST.fasta
Posted date: May 2, 2006 3:37 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 207,409
Number of Sequences: 832831
Number of extensions: 207409
Number of successful extensions: 60261
Number of sequences better than 10.0: 174
Number of HSP's better than 10.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60020
Number of HSP's gapped (non-prelim): 238
length of query: 684
length of database: 491,359,669
effective HSP length: 19
effective length of query: 665
effective length of database: 475,535,880
effective search space: 316231360200
effective search space used: 316231360200
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)