BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.211
(777 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF071274.1|CF071274 FE1_16_D02.g1_A002 Iron-deficient se... 591 e-167
gb|CW319235.1|CW319235 104_811_11474377_148_35884_003 Sorgh... 583 e-165
gb|CW417908.1|CW417908 fsbb001f121c05f0 Sorghum methylation... 583 e-165
gb|BE355360.1|BE355360 DG1_114_A03.b1_A002 Dark Grown 1 (DG... 583 e-165
gb|AW680031.1|AW680031 WS1_34_A02.g1_A002 Water-stressed 1 ... 575 e-162
gb|BE355526.1|BE355526 DG1_114_A03.g1_A002 Dark Grown 1 (DG... 575 e-162
gb|BG410872.1|BG410872 EM1_27_A01.g1_A002 Embryo 1 (EM1) So... 575 e-162
gb|CW463246.1|CW463246 fsbb001f211m02f0 Sorghum methylation... 567 e-160
gb|CF072752.1|CF072752 FE1_25_E07.g1_A002 Iron-deficient se... 567 e-160
gb|CW188377.1|CW188377 104_608_11172997_148_36734_061 Sorgh... 549 e-154
gb|CW191309.1|CW191309 104_613_11178426_116_36942_075 Sorgh... 547 e-154
gb|BG411209.1|BG411209 EM1_27_A01.b1_A002 Embryo 1 (EM1) So... 547 e-154
gb|AW745446.1|AW745446 WS1_34_A02.b1_A002 Water-stressed 1 ... 543 e-153
gb|CW183462.1|CW183462 104_599_11164629_148_36672_089 Sorgh... 539 e-151
gb|CD464058.1|CD464058 ETH1_48_H05.b1_A002 Ethylene-treated... 539 e-151
gb|CW361905.1|CW361905 fsbb001f030l13f0 Sorghum methylation... 533 e-150
gb|CW129063.1|CW129063 104_511_11114353_148_34760_015 Sorgh... 513 e-144
gb|BE599532.1|BE599532 PI1_88_F07.b1_A002 Pathogen induced ... 498 e-139
gb|BF704683.1|BF704683 FM1_50_B08.b1_A003 Floral-Induced Me... 496 e-138
gb|AI724175.1|AI724175 RHIZ1_8_A04.y2_A001 Rhizome1 (RHIZ1)... 486 e-135
gb|BG102543.1|BG102543 RHIZ2_34_D04.g1_A003 Rhizome2 (RHIZ2... 484 e-135
gb|BG488416.1|BG488416 RHIZ2_63_D10.b1_A003 Rhizome2 (RHIZ2... 482 e-134
gb|BE917707.1|BE917707 OV1_6_B04.b1_A002 Ovary 1 (OV1) Sorg... 480 e-133
gb|CW297850.1|CW297850 104_780_11462260_116_35647_012 Sorgh... 474 e-132
gb|BG240440.1|BG240440 OV1_30_A12.b1_A002 Ovary 1 (OV1) Sor... 474 e-132
gb|CW128767.1|CW128767 104_510_11114194_148_34755_039 Sorgh... 472 e-131
gb|AW564395.1|AW564395 LG1_292_F12.b1_A002 Light Grown 1 (L... 472 e-131
gb|BE355445.1|BE355445 DG1_114_A03.b2_A002 Dark Grown 1 (DG... 472 e-131
gb|BE593143.1|BE593143 WS1_98_A10.g1_A002 Water-stressed 1 ... 472 e-131
gb|BG488106.1|BG488106 RHIZ2_63_D10.g1_A003 Rhizome2 (RHIZ2... 472 e-131
gb|CD431873.1|CD431873 ETH1_11_A02.g1_A002 Ethylene-treated... 472 e-131
gb|CN150853.1|CN150853 WOUND1_71_G11.g1_A002 Wounded leaves... 472 e-131
gb|CN126047.1|CN126047 RHOH1_14_H01.g1_A002 Acid- and alkal... 464 e-129
gb|CX608442.1|CX608442 ANR1_38_D08.g1_A002 Anaerobic roots ... 464 e-129
gb|CF071535.1|CF071535 FE1_17_C03.b1_A002 Iron-deficient se... 460 e-128
gb|BG052252.1|BG052252 RHIZ2_12_B05.g1_A003 Rhizome2 (RHIZ2... 454 e-126
gb|BE917630.1|BE917630 OV1_6_B04.g1_A002 Ovary 1 (OV1) Sorg... 452 e-125
gb|BE593453.1|BE593453 WS1_98_A10.b1_A002 Water-stressed 1 ... 436 e-120
gb|AW286565.1|AW286565 LG1_334_E01.g1_A002 Light Grown 1 (L... 428 e-118
gb|CW317075.1|CW317075 104_808_11473223_116_35851_084 Sorgh... 426 e-117
gb|BZ341857.1|BZ341857 ic79b05.g1 WGS-SbicolorF (JM107 adap... 424 e-117
gb|CL152064.1|CL152064 104_335_10779694_116_31364_094 Sorgh... 424 e-117
gb|CW155043.1|CW155043 104_557_11145924_116_36362_042 Sorgh... 424 e-117
gb|CW155044.1|CW155044 104_557_11145924_148_36361_042 Sorgh... 424 e-117
gb|BE599367.1|BE599367 PI1_88_F07.g1_A002 Pathogen induced ... 424 e-117
gb|BF480763.1|BF480763 FM1_14_F11.g1_A003 Floral-Induced Me... 424 e-117
gb|BF481909.1|BF481909 FM1_22_H04.g1_A003 Floral-Induced Me... 424 e-117
gb|BF656458.1|BF656458 FM1_50_B08.g1_A003 Floral-Induced Me... 424 e-117
gb|CD213618.1|CD213618 HS1_52_G12.b1_A012 Heat-shocked seed... 424 e-117
gb|CD213713.1|CD213713 HS1_52_G12.g1_A012 Heat-shocked seed... 424 e-117
gb|CD462726.1|CD462726 ETH1_39_B03.g1_A002 Ethylene-treated... 424 e-117
gb|CX606979.1|CX606979 ANR1_6_B05.b1_A002 Anaerobic roots S... 424 e-117
gb|CX607063.1|CX607063 ANR1_6_B05.g1_A002 Anaerobic roots S... 424 e-117
gb|CX610420.1|CX610420 ANR1_18_D02.g1_A002 Anaerobic roots ... 424 e-117
gb|CN125957.1|CN125957 RHOH1_14_H01.b1_A002 Acid- and alkal... 420 e-116
gb|CW410848.1|CW410848 fsbb001f105m09k0 Sorghum methylation... 416 e-114
gb|CW410847.1|CW410847 fsbb001f105m09f0 Sorghum methylation... 410 e-113
gb|BE357369.1|BE357369 DG1_148_A05.g1_A002 Dark Grown 1 (DG... 410 e-113
gb|CD432572.1|CD432572 ETH1_30_E04.g1_A002 Ethylene-treated... 410 e-113
gb|BG048803.1|BG048803 OV1_23_C04.b1_A002 Ovary 1 (OV1) Sor... 406 e-111
gb|CF431776.1|CF431776 NIT1_9_B03.b1_A002 Nitrogen-deficien... 404 e-111
gb|CW156116.1|CW156116 104_558_11146509_148_36368_081 Sorgh... 402 e-110
gb|CX607748.1|CX607748 ANR1_30_B07.g1_A002 Anaerobic roots ... 402 e-110
gb|BE592516.1|BE592516 WS1_94_A05.b1_A002 Water-stressed 1 ... 396 e-108
gb|CW306661.1|CW306661 104_792_11466961_148_35713_007 Sorgh... 392 e-107
gb|CW105327.1|CW105327 104_474_11012845_116_34450_053 Sorgh... 389 e-106
gb|CW394994.1|CW394994 fsbb001f082n15f0 Sorghum methylation... 389 e-106
gb|BF480894.1|BF480894 FM1_14_F11.b1_A003 Floral-Induced Me... 389 e-106
gb|CW490111.1|CW490111 fsbb001f275g08k0 Sorghum methylation... 387 e-105
gb|BF482021.1|BF482021 FM1_22_H04.b1_A003 Floral-Induced Me... 387 e-105
gb|CW182557.1|CW182557 104_598_11164141_116_36663_061 Sorgh... 385 e-105
gb|BE592378.1|BE592378 WS1_94_A05.g1_A002 Water-stressed 1 ... 385 e-105
gb|CW112587.1|CW112587 104_486_11104970_116_34548_007 Sorgh... 377 e-102
gb|AI723845.1|AI723845 RHIZ1_28_B06.y1_A001 Rhizome1 (RHIZ1... 377 e-102
gb|BG049237.1|BG049237 OV1_17_D01.g1_A002 Ovary 1 (OV1) Sor... 377 e-102
gb|CX607662.1|CX607662 ANR1_30_B07.b1_A002 Anaerobic roots ... 371 e-101
gb|AI724242.1|AI724242 RHIZ1_8_B12.y2_A001 Rhizome1 (RHIZ1)... 365 4e-099
gb|CF484983.1|CF484983 POL1_28_F02.g1_A002 Pollen Sorghum b... 347 9e-094
gb|CF431835.1|CF431835 NIT1_9_B03.g1_A002 Nitrogen-deficien... 331 6e-089
gb|CF772707.1|CF772707 DSBF1_38_D05.g1_A010 Drought-stresse... 321 5e-086
gb|CW432220.1|CW432220 fsbb001f146m24f0 Sorghum methylation... 319 2e-085
gb|BG052312.1|BG052312 RHIZ2_12_B05.b1_A003 Rhizome2 (RHIZ2... 315 3e-084
gb|BG102866.1|BG102866 RHIZ2_34_D04.b1_A003 Rhizome2 (RHIZ2... 315 3e-084
gb|BG049096.1|BG049096 OV1_23_C04.g1_A002 Ovary 1 (OV1) Sor... 307 8e-082
gb|BG558204.1|BG558204 RHIZ2_64_D04.b1_A003 Rhizome2 (RHIZ2... 307 8e-082
gb|BF704815.1|BF704815 FM1_51_H04.b1_A003 Floral-Induced Me... 299 2e-079
gb|CF074009.1|CF074009 FE1_9_D12.g1_A002 Iron-deficient see... 297 8e-079
gb|CN150769.1|CN150769 WOUND1_71_G11.b1_A002 Wounded leaves... 293 1e-077
gb|CW415400.1|CW415400 fsbb001f115h21f0 Sorghum methylation... 289 2e-076
gb|BG240054.1|BG240054 OV1_17_D01.b1_A002 Ovary 1 (OV1) Sor... 285 3e-075
gb|CW182558.1|CW182558 104_598_11164141_148_36664_061 Sorgh... 278 7e-073
gb|CW306660.1|CW306660 104_792_11466961_116_35709_007 Sorgh... 278 7e-073
gb|AW677105.1|AW677105 DG1_4_H07.b1_A002 Dark Grown 1 (DG1)... 278 7e-073
gb|CW070741.1|CW070741 104_322_10590964_114_30544 Sorghum m... 276 3e-072
gb|CW088567.1|CW088567 104_433_10948227_116_32575_006 Sorgh... 268 7e-070
gb|CW105328.1|CW105328 104_474_11012845_148_34446_053 Sorgh... 262 4e-068
gb|CW394995.1|CW394995 fsbb001f082n15k0 Sorghum methylation... 258 7e-067
gb|AI724884.1|AI724884 RHIZ1_30_G03.y3_A001 Rhizome1 (RHIZ1... 250 2e-064
gb|CW191310.1|CW191310 104_613_11178426_148_36941_075 Sorgh... 246 3e-063
gb|CW227263.1|CW227263 104_665_11205321_148_37224_037 Sorgh... 212 4e-053
gb|BF656582.1|BF656582 FM1_51_H04.g1_A003 Floral-Induced Me... 206 2e-051
gb|CL159717.1|CL159717 104_349_10804465_114_31381_289 Sorgh... 202 3e-050
gb|BG560769.1|BG560769 RHIZ2_64_D04.g1_A003 Rhizome2 (RHIZ2... 200 1e-049
gb|CW104944.1|CW104944 104_474_11012677_148_34448_061 Sorgh... 198 5e-049
gb|CF430869.1|CF430869 NIT1_1_E01.b1_A002 Nitrogen-deficien... 196 2e-048
gb|CD431850.1|CD431850 ETH1_11_D10.g1_A002 Ethylene-treated... 176 2e-042
gb|CW344083.1|CW344083 104_846_11487770_116_36196_005 Sorgh... 174 8e-042
gb|CW113300.1|CW113300 104_487_11105369_148_34551_071 Sorgh... 161 1e-037
gb|AI724525.1|AI724525 RHIZ1_37_E01.y1_A001 Rhizome1 (RHIZ1... 161 1e-037
gb|AI723852.1|AI723852 RHIZ1_28_C06.y1_A001 Rhizome1 (RHIZ1... 157 2e-036
gb|BE353104.1|BE353104 DG1_4_H07.g1_A002 Dark Grown 1 (DG1)... 157 2e-036
gb|CW088569.1|CW088569 104_433_10948227_251_32621_006 Sorgh... 155 7e-036
gb|CW104943.1|CW104943 104_474_11012677_116_34452_061 Sorgh... 151 1e-034
gb|CW238284.1|CW238284 104_695_11216646_148_37417_029 Sorgh... 147 2e-033
gb|CW424980.1|CW424980 fsbb001f135j06f0 Sorghum methylation... 147 2e-033
gb|CL152063.1|CL152063 104_335_10779694_114_31363_094 Sorgh... 123 3e-026
gb|CW070742.1|CW070742 104_322_10590964_116_30543 Sorghum m... 103 2e-020
gb|CW415401.1|CW415401 fsbb001f115h21k0 Sorghum methylation... 100 4e-019
gb|CF483259.1|CF483259 POL1_21_A09.b1_A002 Pollen Sorghum b... 72 8e-011
gb|CW049116.1|CW049116 104_288_10513836_114_30200 Sorghum m... 70 3e-010
gb|CF434162.1|CF434162 NIT1_32_H03.g1_A002 Nitrogen-deficie... 64 2e-008
gb|BE358843.1|BE358843 DG1_32_D03.g1_A002 Dark Grown 1 (DG1... 60 3e-007
gb|AW282719.1|AW282719 LG1_292_F12.g1_A002 Light Grown 1 (L... 56 5e-006
gb|CW424981.1|CW424981 fsbb001f135j06k0 Sorghum methylation... 50 3e-004
gb|CL170389.1|CL170389 104_371_10813777_116_31791_097 Sorgh... 48 0.001
gb|CL179294.1|CL179294 104_388_10895213_148_31909_125 Sorgh... 48 0.001
gb|CL186013.1|CL186013 104_400_10899928_116_32405_056 Sorgh... 48 0.001
gb|CW233439.1|CW233439 104_686_11213422_116_37376_085 Sorgh... 48 0.001
gb|CW252274.1|CW252274 104_715_11224407_116_35096_060 Sorgh... 48 0.001
gb|CW278768.1|CW278768 104_753_11406722_116_35426_009 Sorgh... 48 0.001
gb|CW317076.1|CW317076 104_808_11473223_148_35855_084 Sorgh... 48 0.001
gb|BE357302.1|BE357302 DG1_148_A05.b1_A002 Dark Grown 1 (DG... 48 0.001
gb|CN125761.1|CN125761 RHOH1_13_D05.b1_A002 Acid- and alkal... 48 0.001
gb|CN125836.1|CN125836 RHOH1_13_D05.g1_A002 Acid- and alkal... 48 0.001
gb|CW105329.1|CW105329 104_474_11012845_148_34479_053 Sorgh... 46 0.005
gb|BE358231.1|BE358231 DG1_26_E04.b2_A002 Dark Grown 1 (DG1... 46 0.005
gb|CW314974.1|CW314974 104_805_11472113_116_35877_065 Sorgh... 44 0.019
gb|CD212479.1|CD212479 HS1_5_C01.g1_A012 Heat-shocked seedl... 44 0.019
gb|CN133945.1|CN133945 OX1_19_F11.b1_A002 Oxidatively-stres... 44 0.019
gb|CN134030.1|CN134030 OX1_19_F11.g1_A002 Oxidatively-stres... 44 0.019
gb|BZ351026.1|BZ351026 ht64f02.g1 WGS-SbicolorF (JM107 adap... 40 0.30
gb|CL171001.1|CL171001 104_372_10889103_116_31779_159 Sorgh... 40 0.30
gb|CL171002.1|CL171002 104_372_10889103_148_31778_159 Sorgh... 40 0.30
gb|CL193509.1|CL193509 104_417_10940978_116_32279_011 Sorgh... 40 0.30
gb|CW026197.1|CW026197 104_252_10497812_114_30513 Sorghum m... 40 0.30
gb|CW030759.1|CW030759 104_258_10500410_116_30404 Sorghum m... 40 0.30
gb|CW205667.1|CW205667 104_634_11187186_116_36954_077 Sorgh... 40 0.30
gb|CW333757.1|CW333757 104_832_11482134_116_36058_031 Sorgh... 40 0.30
gb|CW333758.1|CW333758 104_832_11482134_148_36057_031 Sorgh... 40 0.30
gb|CW336928.1|CW336928 104_836_11483863_116_36110_024 Sorgh... 40 0.30
gb|CW336929.1|CW336929 104_836_11483863_148_36106_024 Sorgh... 40 0.30
gb|CW408451.1|CW408451 fsbb001f102f15f0 Sorghum methylation... 40 0.30
gb|CW473767.1|CW473767 fsbb001f229e18f0 Sorghum methylation... 40 0.30
gb|CW484996.1|CW484996 fsbb001f247h22f0 Sorghum methylation... 40 0.30
gb|BE600943.1|BE600943 PI1_95_A11.b1_A002 Pathogen induced ... 40 0.30
gb|CD221424.1|CD221424 CCC1_54_D11.g1_A007 Callus culture/c... 40 0.30
gb|CD226745.1|CD226745 CCC1_47_D11.g1_A007 Callus culture/c... 40 0.30
gb|CD431824.1|CD431824 ETH1_11_A02.b1_A002 Ethylene-treated... 40 0.30
gb|CF487244.1|CF487244 POL1_42_D05.g1_A002 Pollen Sorghum b... 40 0.30
gb|CF488705.1|CF488705 POL1_51_E04.g1_A002 Pollen Sorghum b... 40 0.30
gb|CN151122.1|CN151122 WOUND1_73_C02.g1_A002 Wounded leaves... 40 0.30
gb|CN151453.1|CN151453 WOUND1_75_C02.g1_A002 Wounded leaves... 40 0.30
gb|CN152088.1|CN152088 WOUND1_79_E05.g1_A002 Wounded leaves... 40 0.30
>gb|CF071274.1|CF071274 FE1_16_D02.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_16_D02_A002 5', mRNA sequence
Length = 551
Score = 591 bits (298), Expect = e-167
Identities = 340/354 (96%)
Strand = Plus / Plus
Query: 237 ctaggagctagtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgag 296
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 198 ctaggagctggtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgag 257
Query: 297 ctcgccggggaggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggctt 356
||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 258 ctcaccggggaggacgaggcggacggaggtctggatctcccgggacgtgatggtgggctt 317
Query: 357 cttgttgtaccgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgat 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 cttgttgtaccgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgat 377
Query: 417 gaaggagttcatgatggacatggccttggacgagatgccaatgtccgggtgcacctgctt 476
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 378 gaaggagttcatgatggacatggccttggacgagatgccgatgtccgggtgcacctgctt 437
Query: 477 cagcaccttgaagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccc 536
| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 438 cggcaccttgaagatgtagatcttgtacgtctccaccgacttcttcgccttcttctttcc 497
Query: 537 cttcttctcgccaccctccttgcctgcggacttgcccgcggggagccgcttctc 590
|||||||||||| || |||||||| ||||||||||||| ||||||||||||||
Sbjct: 498 cttcttctcgccgccttccttgcccgcggacttgcccgacgggagccgcttctc 551
>gb|CW319235.1|CW319235 104_811_11474377_148_35884_003 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11474377, DNA
sequence
Length = 704
Score = 583 bits (294), Expect = e-165
Identities = 412/452 (91%), Gaps = 12/452 (2%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 gtgaacttggtgacagccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 537
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 536 aggacgaggcgcaccgaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 477
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|||||||||||||| | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 476 cgcgccagcttggcggactcggccgcaagcttctcgaagatgtcgttgatgaaggagttc 417
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 416 atgatggacatggccttggacgagatgccgatgtccgggtgcacctgcttgagcaccttg 357
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttctt---c 543
||||||||||||||||| |||||||| |||||||| |||||||||||||||||||| |
Sbjct: 356 aagatgtagatcttgtaggtctccacggacttcttcgccttcttcttccccttcttgccc 297
Query: 544 tcgccaccctccttgcctgcggacttgcccgcggggagccgcttctcagccttgggcttc 603
||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 296 tcgccgccctccttgccggcggacttgcccgcggggagccgcttctcggccttgggcttc 237
Query: 604 ttccccgccgtggccttctccgc---------cgccggctcctcctcggcaggcttcttg 654
|||||||||| |||||||||||| ||| ||||||||||| || ||||||||
Sbjct: 236 ttccccgccggggccttctccgccttctcggtcgcgggctcctcctccgcgggcttcttc 177
Query: 655 gcggcgggcttcttctcggccttgggcgccat 686
|| || ||||||||||| |||||||| |||||
Sbjct: 176 gccgccggcttcttctccgccttgggtgccat 145
>gb|CW417908.1|CW417908 fsbb001f121c05f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f121c05, DNA
sequence
Length = 812
Score = 583 bits (294), Expect = e-165
Identities = 412/452 (91%), Gaps = 12/452 (2%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 gtgaacttggtgacagccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 487
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 486 aggacgaggcgcaccgaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 427
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|||||||||||||| | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 426 cgcgccagcttggcggactcggccgcaagcttctcgaagatgtcgttgatgaaggagttc 367
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 366 atgatggacatggccttggacgagatgccgatgtccgggtgcacctgcttgagcaccttg 307
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttctt---c 543
||||||||||||||||| |||||||| |||||||| |||||||||||||||||||| |
Sbjct: 306 aagatgtagatcttgtaggtctccacggacttcttcgccttcttcttccccttcttgccc 247
Query: 544 tcgccaccctccttgcctgcggacttgcccgcggggagccgcttctcagccttgggcttc 603
||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 246 tcgccgccctccttgccggcggacttgcccgcggggagccgcttctcggccttgggcttc 187
Query: 604 ttccccgccgtggccttctccgc---------cgccggctcctcctcggcaggcttcttg 654
|||||||||| |||||||||||| ||| ||||||||||| || ||||||||
Sbjct: 186 ttccccgccggggccttctccgccttctcggtcgcgggctcctcctccgcgggcttcttc 127
Query: 655 gcggcgggcttcttctcggccttgggcgccat 686
|| || ||||||||||| |||||||| |||||
Sbjct: 126 gccgccggcttcttctccgccttgggtgccat 95
>gb|BE355360.1|BE355360 DG1_114_A03.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 526
Score = 583 bits (294), Expect = e-165
Identities = 412/452 (91%), Gaps = 12/452 (2%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gtgaacttggtgacagccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 457
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 456 aggacgaggcgcaccgaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 397
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|||||||||||||| | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 396 cgcgccagcttggcggactcggccgcaagcttctcgaagatgtcgttgatgaaggagttc 337
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 336 atgatggacatggccttggacgagatgccgatgtccgggtgcacctgcttgagcaccttg 277
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttctt---c 543
||||||||||||||||| |||||||| |||||||| |||||||||||||||||||| |
Sbjct: 276 aagatgtagatcttgtaggtctccacggacttcttcgccttcttcttccccttcttgccc 217
Query: 544 tcgccaccctccttgcctgcggacttgcccgcggggagccgcttctcagccttgggcttc 603
||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 216 tcgccgccctccttgccggcggacttgcccgcggggagccgcttctcggccttgggcttc 157
Query: 604 ttccccgccgtggccttctccgc---------cgccggctcctcctcggcaggcttcttg 654
|||||||||| |||||||||||| ||| ||||||||||| || ||||||||
Sbjct: 156 ttccccgccggggccttctccgccttctcggtcgcgggctcctcctccgcgggcttcttc 97
Query: 655 gcggcgggcttcttctcggccttgggcgccat 686
|| || ||||||||||| |||||||| |||||
Sbjct: 96 gccgccggcttcttctccgccttgggtgccat 65
>gb|AW680031.1|AW680031 WS1_34_A02.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 558
Score = 575 bits (290), Expect = e-162
Identities = 361/384 (94%), Gaps = 3/384 (0%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 gtgaacttggtgacagccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 359
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 358 aggacgaggcgcaccgaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 299
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|||||||||||||| | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 298 cgcgccagcttggcggactcggccgcaagcttctcgaagatgtcgttgatgaaggagttc 239
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 238 atgatggacatggccttggacgagatgccgatgtccgggtgcacctgcttgagcaccttg 179
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttctt---c 543
||||||||||||||||| |||||||| |||||||| |||||||||||||||||||| |
Sbjct: 178 aagatgtagatcttgtaggtctccacggacttcttcgccttcttcttccccttcttgccc 119
Query: 544 tcgccaccctccttgcctgcggacttgcccgcggggagccgcttctcagccttgggcttc 603
||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 118 tcgccgccctccttgccggcggacttgcccgcggggagccgcttctcggccttgggcttc 59
Query: 604 ttccccgccgtggccttctccgcc 627
|||||||||| |||||||||||||
Sbjct: 58 ttccccgccggggccttctccgcc 35
>gb|BE355526.1|BE355526 DG1_114_A03.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 662
Score = 575 bits (290), Expect = e-162
Identities = 361/384 (94%), Gaps = 3/384 (0%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 gtgaacttggtgacagccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 353
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 352 aggacgaggcgcaccgaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 293
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|||||||||||||| | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 292 cgcgccagcttggcggactcggccgcaagcttctcgaagatgtcgttgatgaaggagttc 233
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 232 atgatggacatggccttggacgagatgccgatgtccgggtgcacctgcttgagcaccttg 173
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttctt---c 543
||||||||||||||||| |||||||| |||||||| |||||||||||||||||||| |
Sbjct: 172 aagatgtagatcttgtaggtctccacggacttcttcgccttcttcttccccttcttgccc 113
Query: 544 tcgccaccctccttgcctgcggacttgcccgcggggagccgcttctcagccttgggcttc 603
||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 112 tcgccgccctccttgccggcggacttgcccgcggggagccgcttctcggccttgggcttc 53
Query: 604 ttccccgccgtggccttctccgcc 627
|||||||||| |||||||||||||
Sbjct: 52 ttccccgccggggccttctccgcc 29
>gb|BG410872.1|BG410872 EM1_27_A01.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 537
Score = 575 bits (290), Expect = e-162
Identities = 361/384 (94%), Gaps = 3/384 (0%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtgaacttggtgacagccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 325
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 324 aggacgaggcgcaccgaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 265
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|||||||||||||| | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 264 cgcgccagcttggcggactcggccgcaagcttctcgaagatgtcgttgatgaaggagttc 205
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 204 atgatggacatggccttggacgagatgccgatgtccgggtgcacctgcttgagcaccttg 145
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttctt---c 543
||||||||||||||||| |||||||| |||||||| |||||||||||||||||||| |
Sbjct: 144 aagatgtagatcttgtaggtctccacggacttcttcgccttcttcttccccttcttgccc 85
Query: 544 tcgccaccctccttgcctgcggacttgcccgcggggagccgcttctcagccttgggcttc 603
||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 84 tcgccgccctccttgccggcggacttgcccgcggggagccgcttctcggccttgggcttc 25
Query: 604 ttccccgccgtggccttctccgcc 627
|||||||||| |||||||||||||
Sbjct: 24 ttccccgccggggccttctccgcc 1
>gb|CW463246.1|CW463246 fsbb001f211m02f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f211m02, DNA
sequence
Length = 667
Score = 567 bits (286), Expect = e-160
Identities = 366/394 (92%), Gaps = 9/394 (2%)
Strand = Plus / Minus
Query: 302 cggggaggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgt 361
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 667 cggggaggacgaggcggacggaggtctggatctcccgggacgtgatggtgggcttcttgt 608
Query: 362 tgtaccgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaagg 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 tgtaccgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaagg 548
Query: 422 agttcatgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagca 481
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 547 agttcatgatggacatggccttggacgagatgccgatgtccgggtgcacctgcttcagca 488
Query: 482 ccttgaagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttct 541
|||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 487 ccttgaagatgtagatcttgtacgtctccaccgacttcttcgccttcttctttcccttct 428
Query: 542 tctcgccaccctccttgcctgcggacttgcccgcggggagccgcttctcagccttgggct 601
||||||| || |||||||| ||||||||||||| |||||||||||||| ||||| ||||
Sbjct: 427 tctcgccgccttccttgcccgcggacttgcccgacgggagccgcttctcggccttcggct 368
Query: 602 tcttccccgccgtggcctt---------ctccgccgccggctcctcctcggcaggcttct 652
|||||||||||| |||||| ||||| || ||||||||||| || |||||||
Sbjct: 367 tcttccccgccggggccttctctgccttctccgtcgatggctcctcctccgccggcttct 308
Query: 653 tggcggcgggcttcttctcggccttgggcgccat 686
|||| |||||||||||||||||||||||||||||
Sbjct: 307 tggccgcgggcttcttctcggccttgggcgccat 274
>gb|CF072752.1|CF072752 FE1_25_E07.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_25_E07_A002 5', mRNA sequence
Length = 590
Score = 567 bits (286), Expect = e-160
Identities = 325/338 (96%)
Strand = Plus / Plus
Query: 237 ctaggagctagtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgag 296
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 253 ctaggagctggtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgag 312
Query: 297 ctcgccggggaggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggctt 356
||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 313 ctcaccggggaggacgaggcggacggaggtctggatctcccgggacgtgatggtgggctt 372
Query: 357 cttgttgtaccgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgat 416
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 373 cttgttgtaccgcgccagcttggccgcctccgccgccagcttctcgaaaatgtcgttgat 432
Query: 417 gaaggagttcatgatggacatggccttggacgagatgccaatgtccgggtgcacctgctt 476
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 433 gaaggagttcatgatggacatggccttggacgagatgccgatgtccgggtgcacctgctt 492
Query: 477 cagcaccttgaagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccc 536
||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||
Sbjct: 493 cagcaccttgaagatgtagatctcgtacgtctccaccgacttcttcgccttcttctttcc 552
Query: 537 cttcttctcgccaccctccttgcctgcggacttgcccg 574
|||||||||||| || |||||||| |||||||||||||
Sbjct: 553 cttcttctcgccgccttccttgcccgcggacttgcccg 590
>gb|CW188377.1|CW188377 104_608_11172997_148_36734_061 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11172997, DNA
sequence
Length = 707
Score = 549 bits (277), Expect = e-154
Identities = 402/443 (90%), Gaps = 3/443 (0%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 487
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||| || || ||||||||||| | ||| |||||||| ||||||||||||||
Sbjct: 486 aggacgaggcgcaccgacgtctggatctccctggaggtgatggtgggcttcttgttgtag 427
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
||||| |||||||| ||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 426 cgcgcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 367
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| |||||||||||||| |||||||||
Sbjct: 366 atgatggacatggccttggaggagatgccgatgtcagggtgcacctgcttgagcaccttg 307
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttcttctcg 546
||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 306 aagatgtagatcttgtaggtctccaccgacttcttggccttcttcttccccttcttgtcg 247
Query: 547 ccaccctccttgcctgcggacttgcccgcggggagccgcttctcagccttgggcttcttc 606
|| || |||||||| || ||||||||||| ||||| |||||||| |||||||||||||||
Sbjct: 246 ccgccttccttgccggccgacttgcccgccgggaggcgcttctccgccttgggcttcttc 187
Query: 607 cccgccgtggccttctccgccgccggctcctcct---cggcaggcttcttggcggcgggc 663
||||||| ||||||||| ||||| |||||||||| | || |||||||| || || |||
Sbjct: 186 cccgccggggccttctcggccgcgggctcctcctccgccgcgggcttcttcgccgccggc 127
Query: 664 ttcttctcggccttgggcgccat 686
|||||||| |||||||| |||||
Sbjct: 126 ttcttctccgccttgggagccat 104
>gb|CW191309.1|CW191309 104_613_11178426_116_36942_075 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11178426, DNA
sequence
Length = 724
Score = 547 bits (276), Expect = e-154
Identities = 399/440 (90%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 602 gtgaacttggtaacggccttggtgccctcggacacggcgtgcttggcgagctcgcctggg 543
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||| || || ||||||||||| | ||| |||||||| ||||||||||||||
Sbjct: 542 aggacgaggcgcaccgacgtctggatctccctggaggtgatggtgggcttcttgttgtag 483
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| ||||| | || |||||||||||||||||||||||||||||||||
Sbjct: 482 cgggcgagcttggcggcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 423
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| |||||||||||||| |||||||||
Sbjct: 422 atgatggacatggccttggaggagatgccgatgtcggggtgcacctgcttgagcaccttg 363
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttcttctcg 546
||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||| |||
Sbjct: 362 aagatgtagatcttgtaggtctccaccgacttcttggccttcttcttgcccttcttgtcg 303
Query: 547 ccaccctccttgcctgcggacttgcccgcggggagccgcttctcagccttgggcttcttc 606
|| ||||||||||| || ||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 302 ccgccctccttgccggcagacttgcccgcggggaggcgcttctccgccttgggcttcttc 243
Query: 607 cccgccgtggccttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttc 666
||||||| ||||||||| ||||| ||||||||||| || |||||||| || || ||||||
Sbjct: 242 cccgccggggccttctcggccgcgggctcctcctccgcgggcttcttcgccgccggcttc 183
Query: 667 ttctcggccttgggcgccat 686
||||| ||||||||||||||
Sbjct: 182 ttctccgccttgggcgccat 163
>gb|BG411209.1|BG411209 EM1_27_A01.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 498
Score = 547 bits (276), Expect = e-154
Identities = 388/426 (91%), Gaps = 12/426 (2%)
Strand = Plus / Minus
Query: 273 ctcggagacggcgtgcttggcgagctcgccggggaggacgaggcggacggaggtctggat 332
||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 498 ctcggagacggcgtgcttggcgagctcgccggggaggacgaggcgcaccgaggtctggat 439
Query: 333 ctcgcgggacgtgatggtaggcttcttgttgtaccgcgccagcttggccgcctccgccgc 392
||||||||| |||||||| |||||||||||||| |||||||||||||| | ||| |||||
Sbjct: 438 ctcgcgggaggtgatggtgggcttcttgttgtagcgcgccagcttggcggactcggccgc 379
Query: 393 cagcttctcgaagatgtcgttgatgaaggagttcatgatggacatggccttggacgagat 452
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 aagcttctcgaagatgtcgttgatgaaggagttcatgatggacatggccttggacgagat 319
Query: 453 gccaatgtccgggtgcacctgcttcagcaccttgaagatgtagatcttgtacgtctccac 512
||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 318 gccgatgtccgggtgcacctgcttgagcaccttgaagatgtagatcttgtaggtctccac 259
Query: 513 cgacttctttgccttcttcttccccttctt---ctcgccaccctccttgcctgcggactt 569
|||||||| |||||||||||||||||||| |||||| ||||||||||| ||||||||
Sbjct: 258 ggacttcttcgccttcttcttccccttcttgccctcgccgccctccttgccggcggactt 199
Query: 570 gcccgcggggagccgcttctcagccttgggcttcttccccgccgtggccttctccgc--- 626
||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 198 gcccgcggggagccgcttctcggccttgggcttcttccccgccggggccttctccgcctt 139
Query: 627 ------cgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggccttggg 680
||| ||||||||||| || |||||||| || || ||||||||||| ||||||||
Sbjct: 138 ctcggtcgcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttggg 79
Query: 681 cgccat 686
|||||
Sbjct: 78 tgccat 73
>gb|AW745446.1|AW745446 WS1_34_A02.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 500
Score = 543 bits (274), Expect = e-153
Identities = 386/424 (91%), Gaps = 12/424 (2%)
Strand = Plus / Minus
Query: 275 cggagacggcgtgcttggcgagctcgccggggaggacgaggcggacggaggtctggatct 334
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 498 cggagacggcgtgcttggcgagctcgccggggaggacgaggcgcaccgaggtctggatct 439
Query: 335 cgcgggacgtgatggtaggcttcttgttgtaccgcgccagcttggccgcctccgccgcca 394
||||||| |||||||| |||||||||||||| |||||||||||||| | ||| ||||| |
Sbjct: 438 cgcgggaggtgatggtgggcttcttgttgtagcgcgccagcttggcggactcggccgcaa 379
Query: 395 gcttctcgaagatgtcgttgatgaaggagttcatgatggacatggccttggacgagatgc 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gcttctcgaagatgtcgttgatgaaggagttcatgatggacatggccttggacgagatgc 319
Query: 455 caatgtccgggtgcacctgcttcagcaccttgaagatgtagatcttgtacgtctccaccg 514
| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |
Sbjct: 318 cgatgtccgggtgcacctgcttgagcaccttgaagatgtagatcttgtaggtctccacgg 259
Query: 515 acttctttgccttcttcttccccttctt---ctcgccaccctccttgcctgcggacttgc 571
||||||| |||||||||||||||||||| |||||| ||||||||||| ||||||||||
Sbjct: 258 acttcttcgccttcttcttccccttcttgccctcgccgccctccttgccggcggacttgc 199
Query: 572 ccgcggggagccgcttctcagccttgggcttcttccccgccgtggccttctccgc----- 626
||||||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 198 ccgcggggagccgcttctcggccttgggcttcttccccgccggggccttctccgccttct 139
Query: 627 ----cgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggccttgggcg 682
||| ||||||||||| || |||||||| || || ||||||||||| |||||||| |
Sbjct: 138 cggtcgcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttgggtg 79
Query: 683 ccat 686
||||
Sbjct: 78 ccat 75
>gb|CW183462.1|CW183462 104_599_11164629_148_36672_089 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11164629, DNA
sequence
Length = 693
Score = 539 bits (272), Expect = e-151
Identities = 398/440 (90%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gtgaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 439
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||| | ||| |||||||| ||||| ||||||||
Sbjct: 438 aggacgaggcggacggaggtctggatctccctggaggtgatggtgggctttttgttgtag 379
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
||||| |||||||| || || | || |||||||||||||| |||||||||||||| |||
Sbjct: 378 cgcgcgagcttggcggcttcgccggcgagcttctcgaagatatcgttgatgaaggaattc 319
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| |||| ||||| ||||||||||||||||||
Sbjct: 318 atgatggacatggccttggaggagatgccggtgtcggggtggacctgcttcagcaccttg 259
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttcttctcg 546
||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||| |||
Sbjct: 258 aagatgtagatcttgtaggtctccaccgacttcttagccttcttcttgcccttcttgtcg 199
Query: 547 ccaccctccttgcctgcggacttgcccgcggggagccgcttctcagccttgggcttcttc 606
|| ||||||||||| || ||||||||||| ||||| |||||||| |||||||||||||||
Sbjct: 198 cccccctccttgccggccgacttgcccgccgggaggcgcttctccgccttgggcttcttc 139
Query: 607 cccgccgtggccttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttc 666
||||||| |||||||| ||||| ||||||||||| || |||||||| || || ||||||
Sbjct: 138 cccgccggcgccttctcggccgcgggctcctcctccgcgggcttcttcgccgccggcttc 79
Query: 667 ttctcggccttgggcgccat 686
||||| ||||||||||||||
Sbjct: 78 ttctccgccttgggcgccat 59
>gb|CD464058.1|CD464058 ETH1_48_H05.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_48_H05_A002 3', mRNA sequence
Length = 746
Score = 539 bits (272), Expect = e-151
Identities = 398/440 (90%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 gtgaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 399
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||| | ||| |||||||| ||||| ||||||||
Sbjct: 398 aggacgaggcggacggaggtctggatctccctggaggtgatggtgggctttttgttgtag 339
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
||||| |||||||| || || | || |||||||||||||| |||||||||||||| |||
Sbjct: 338 cgcgcgagcttggcggcttcgccggcgagcttctcgaagatatcgttgatgaaggaattc 279
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| |||| ||||| ||||||||||||||||||
Sbjct: 278 atgatggacatggccttggaggagatgccggtgtcggggtggacctgcttcagcaccttg 219
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttcttctcg 546
||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||| |||
Sbjct: 218 aagatgtagatcttgtaggtctccaccgacttcttagccttcttcttgcccttcttgtcg 159
Query: 547 ccaccctccttgcctgcggacttgcccgcggggagccgcttctcagccttgggcttcttc 606
|| ||||||||||| || ||||||||||| ||||| |||||||| |||||||||||||||
Sbjct: 158 cccccctccttgccggccgacttgcccgccgggaggcgcttctccgccttgggcttcttc 99
Query: 607 cccgccgtggccttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttc 666
||||||| |||||||| ||||| ||||||||||| || |||||||| || || ||||||
Sbjct: 98 cccgccggcgccttctcggccgcgggctcctcctccgcgggcttcttcgccgccggcttc 39
Query: 667 ttctcggccttgggcgccat 686
||||| ||||||||||||||
Sbjct: 38 ttctccgccttgggcgccat 19
>gb|CW361905.1|CW361905 fsbb001f030l13f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f030l13, DNA
sequence
Length = 669
Score = 533 bits (269), Expect = e-150
Identities = 290/297 (97%)
Strand = Plus / Minus
Query: 237 ctaggagctagtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgag 296
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 301 ctaggagctggtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgag 242
Query: 297 ctcgccggggaggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggctt 356
||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 241 ctcaccggggaggacgaggcggacggaggtctggatctcccgggacgtgatggtgggctt 182
Query: 357 cttgttgtaccgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgat 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cttgttgtaccgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgat 122
Query: 417 gaaggagttcatgatggacatggccttggacgagatgccaatgtccgggtgcacctgctt 476
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 121 gaaggagttcatgatggacatggccttggacgagatgccgatgtccgggtgcacctgctt 62
Query: 477 cagcaccttgaagatgtagatcttgtacgtctccaccgacttctttgccttcttctt 533
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 61 cagcaccttgaagatgtagatcttgtacgtctccaccgacttcttcgccttcttctt 5
>gb|CW129063.1|CW129063 104_511_11114353_148_34760_015 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11114353, DNA
sequence
Length = 698
Score = 513 bits (259), Expect = e-144
Identities = 354/385 (91%), Gaps = 3/385 (0%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 630 gtgaacttggtgacggccttggtaccctcggagacggcgtgcttggcgagctccccgggg 571
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||
Sbjct: 570 aggacgaggcggacggaggtctggatctcgcgggaggtaatggtgggcttcttgttgtag 511
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| | |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 510 cgggcgagcttggcggactccgcggccagcttctcgaagatgtcgttgatgaaggagttc 451
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||
Sbjct: 450 atgatggacatggccttggaggagatgccgatgtccgggtgcacctgcttcaggaccttg 391
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttcttctcg 546
||||||||||||||||| |||||||| |||||| |||||||| ||||||||||||||
Sbjct: 390 aagatgtagatcttgtaggtctccacgctcttcttgcccttcttcctccccttcttctcg 331
Query: 547 ccaccctccttgcctgcg---gacttgcccgcggggagccgcttctcagccttgggcttc 603
|| ||||||||||| ||| ||||||||||| |||||||||||||| ||||||||||||
Sbjct: 330 ccgccctccttgccggcggacgacttgcccgccgggagccgcttctccgccttgggcttc 271
Query: 604 ttccccgccgtggccttctccgccg 628
|||||||| | ||||||||||||||
Sbjct: 270 ttccccgcgggggccttctccgccg 246
Score = 56.0 bits (28), Expect = 5e-006
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 631 ggctcctcctcggcaggcttcttggcggcgggcttcttctcggccttgggcgccat 686
||||||||||| || |||||||| | || ||||||||||| ||||||||||||||
Sbjct: 228 ggctcctcctccgcgggcttcttcgacgccggcttcttctctgccttgggcgccat 173
>gb|BE599532.1|BE599532 PI1_88_F07.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 491
Score = 498 bits (251), Expect = e-139
Identities = 371/411 (90%)
Strand = Plus / Minus
Query: 276 ggagacggcgtgcttggcgagctcgccggggaggacgaggcggacggaggtctggatctc 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ggagacggcgtgcttggcgagctcgccggggaggacgaggcggacggaggtctggatctc 432
Query: 336 gcgggacgtgatggtaggcttcttgttgtaccgcgccagcttggccgcctccgccgccag 395
| ||| |||||||| ||||| |||||||| ||||| |||||||| || || | || ||
Sbjct: 431 cctggaggtgatggtgggctttttgttgtagcgcgcgagcttggcggcttcgccggcgag 372
Query: 396 cttctcgaagatgtcgttgatgaaggagttcatgatggacatggccttggacgagatgcc 455
|||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 371 cttctcgaagatatcgttgatgaaggaattcatgatggacatggccttggaggagatgcc 312
Query: 456 aatgtccgggtgcacctgcttcagcaccttgaagatgtagatcttgtacgtctccaccga 515
|||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 311 ggtgtcggggtggacctgcttcagcaccttgaagatgtagatcttgtaggtctccaccga 252
Query: 516 cttctttgccttcttcttccccttcttctcgccaccctccttgcctgcggacttgcccgc 575
|||||| ||||||||||| |||||||| ||||| ||||||||||| || |||||||||||
Sbjct: 251 cttcttagccttcttcttgcccttcttgtcgcccccctccttgccggccgacttgcccgc 192
Query: 576 ggggagccgcttctcagccttgggcttcttccccgccgtggccttctccgccgccggctc 635
||||| |||||||| |||||||||||||||||||||| |||||||| ||||| |||||
Sbjct: 191 cgggaggcgcttctccgccttgggcttcttccccgccggcgccttctcggccgcgggctc 132
Query: 636 ctcctcggcaggcttcttggcggcgggcttcttctcggccttgggcgccat 686
|||||| || |||||||| || || ||||||||||| ||||||||||||||
Sbjct: 131 ctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccat 81
>gb|BF704683.1|BF704683 FM1_50_B08.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 563
Score = 496 bits (250), Expect = e-138
Identities = 393/440 (89%), Gaps = 3/440 (0%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 518 gtgaacttggtgacggccttggttccctcggagacggcgtgcttggcgagctctccgggg 459
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||| |||||||| |||||||||||||| |||||||| |||||||||||||||
Sbjct: 458 aggacgaggcgcacggaggtttggatctcgcgggaggtgatggtgggcttcttgttgtac 399
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
||||| |||||||| ||||| | || |||||||||||||||||||||||||||||||||
Sbjct: 398 cgcgcgagcttggcggcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 339
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||
Sbjct: 338 atgatggacatggccttggaggagatgccgatgtcggggtgcacctgcttcagcaccttg 279
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttcttctcg 546
||||||||||| ||||| |||||||| |||||| ||||||||||||||||||||||||
Sbjct: 278 aagatgtagattttgtaggtctccacgctcttcttggccttcttcttccccttcttctcg 219
Query: 547 ccaccctccttgcctgcggacttgcccgcggggagccgcttctcagccttgggcttcttc 606
|| ||||||||||| | ||||||| ||||| || |||||||| |||||||||||||||
Sbjct: 218 ccgccctccttgccggaggacttggaggcgggcaggcgcttctcggccttgggcttcttc 159
Query: 607 cccgccgtggccttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttc 666
|| || | |||||||||||| | ||||| |||| |||||||| | || ||||||
Sbjct: 158 cctgcgggcgccttctccgccttc---tcctcggcggccggcttcttctccgctggcttc 102
Query: 667 ttctcggccttgggcgccat 686
||||||||||||||||||||
Sbjct: 101 ttctcggccttgggcgccat 82
>gb|AI724175.1|AI724175 RHIZ1_8_A04.y2_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 509
Score = 486 bits (245), Expect = e-135
Identities = 344/377 (91%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 381 gtgaacttggtaacggccttggtgccctcggacacggcgtgcttggcgagctcgcctggg 322
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||| || || ||||||||||| | ||| |||||||| ||||||||||||||
Sbjct: 321 aggacgaggcgcaccgacgtctggatctccctggaggtgatggtgggcttcttgttgtag 262
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| ||||| | || |||||||||||||||||||||||||||||||||
Sbjct: 261 cgggcgagcttggcggcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 202
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||
Sbjct: 201 atgatggacatggccttggaggagatgccgatgtcggggtgcacctgcttcagcaccttg 142
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttcttctcg 546
||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||| |||
Sbjct: 141 aagatgtagatcttgtaggtctccaccgacttcttggccttcttcttgcccttcttgtcg 82
Query: 547 ccaccctccttgcctgcggacttgcccgcggggagccgcttctcagccttgggcttcttc 606
|| ||||||||||| || ||||||||||| ||||| |||||||| |||||||||||||||
Sbjct: 81 ccgccctccttgccggccgacttgcccgccgggaggcgcttctccgccttgggcttcttc 22
Query: 607 cccgccgtggccttctc 623
||||||| |||||||||
Sbjct: 21 cccgccggggccttctc 5
>gb|BG102543.1|BG102543 RHIZ2_34_D04.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 495
Score = 484 bits (244), Expect = e-135
Identities = 336/366 (91%), Gaps = 3/366 (0%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 366 gtgaacttggtgacggccttggtaccctcggagacggcgtgcttggcgagctccccgggg 307
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||
Sbjct: 306 aggacgaggcggacggaggtctggatctcgcgggaggtaatggtgggcttcttgttgtag 247
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| | |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 246 cgggcgagcttggcggactccgcggccagcttctcgaagatgtcgttgatgaaggagttc 187
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||
Sbjct: 186 atgatggacatggccttggaggagatgccgatgtccgggtgcacctgcttcaggaccttg 127
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttcttctcg 546
||||||||||||||||| |||||||| |||||| |||||||| ||||||||||||||
Sbjct: 126 aagatgtagatcttgtaggtctccacgctcttcttccccttcttcctccccttcttctcg 67
Query: 547 ccaccctccttgcctgcg---gacttgcccgcggggagccgcttctcagccttgggcttc 603
|| ||||||||||| || ||||||||||| |||||||||||||| ||||||||||||
Sbjct: 66 ccgccctccttgccgacggacgacttgcccgccgggagccgcttctccgccttgggcttc 7
Query: 604 ttcccc 609
||||||
Sbjct: 6 ttcccc 1
>gb|BG488416.1|BG488416 RHIZ2_63_D10.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 556
Score = 482 bits (243), Expect = e-134
Identities = 395/446 (88%), Gaps = 6/446 (1%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 528 gtgaacttggtgacggccttggtgccctcagagacggcgtgcttggcgagctccccgggg 469
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||| || || |||||||| ||||||||||||||
Sbjct: 468 aggacgaggcggacggaggtctggatctcccgagaagtgatggtgggcttcttgttgtag 409
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| ||||| | || ||||||||||||||||| |||||||||||||||
Sbjct: 408 cgggcgagcttggcggcctcgccggcgagcttctcgaagatgtcattgatgaaggagttc 349
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||
Sbjct: 348 atgatggacatggccttggaggagataccgatgtccgggtgcacctgcttcagcaccttg 289
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttcttctcg 546
|||||||||||||||||||||||||| |||||| |||||||| ||| ||||||||
Sbjct: 288 aagatgtagatcttgtacgtctccacgctcttcttgcccttcttccgacccctcttctcg 229
Query: 547 ccaccctccttgcctgcggacttgcccgcggggagccgcttctcagccttgggcttcttc 606
|| |||||||||| |||||||||||||| ||||| |||||||| |||||||||||||||
Sbjct: 228 ccgccctccttgctggcggacttgcccgccgggagacgcttctccgccttgggcttcttc 169
Query: 607 cccgccgtggccttctcc------gccgccggctcctcctcggcaggcttcttggcggcg 660
||||| | |||||||||| ||||| | ||||||||| | |||||||| || ||
Sbjct: 168 cccgcgggggccttctccgccggggccgcggactcctcctccacgggcttcttcgctgcc 109
Query: 661 ggcttcttctcggccttgggcgccat 686
||||||||||| ||||||||||||||
Sbjct: 108 ggcttcttctccgccttgggcgccat 83
>gb|BE917707.1|BE917707 OV1_6_B04.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 554
Score = 480 bits (242), Expect = e-133
Identities = 399/452 (88%), Gaps = 12/452 (2%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 539 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctccccgggg 480
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 479 aggacgaggcggacggaagtctggatctctcgggacgtgatggtgggcttcttgttgtag 420
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| | ||| || || |||||||||||||||||||||||||||||||||
Sbjct: 419 cgggcgagcttggcggactcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 360
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||
Sbjct: 359 atgatggacatggccttggaggagatgccgatgtccgggtgcacctgcttgagcaccttg 300
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttcttctcg 546
||||||||||||||||| |||||||| |||||| ||||||||||| |||||||| |
Sbjct: 299 aagatgtagatcttgtaggtctccacgctcttcttggccttcttcttgcccttcttgccc 240
Query: 547 ccaccctccttgcctgc---ggacttgcccgcggggagccgcttctcagccttgggcttc 603
| || |||||||| || |||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 239 tcgccgtccttgccggcgctggacttgcccgcggggaggcgcttctccgccttcggcttc 180
Query: 604 ttccccgccgtg---------gccttctccgccgccggctcctcctcggcaggcttcttg 654
|||||||||| | |||||||| ||||| ||||||||||| || ||||||||
Sbjct: 179 ttccccgccggggtcttctccgccttctcggccgcgggctcctcctccgcgggcttcttc 120
Query: 655 gcggcgggcttcttctcggccttgggcgccat 686
|| || ||||||||||| ||||||||||||||
Sbjct: 119 gccgccggcttcttctccgccttgggcgccat 88
>gb|CW297850.1|CW297850 104_780_11462260_116_35647_012 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11462260, DNA
sequence
Length = 662
Score = 474 bits (239), Expect = e-132
Identities = 328/357 (91%), Gaps = 3/357 (0%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 357 gtgaacttggtgacggccttggtaccctcggagacggcgtgcttggcgagctccccgggg 298
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||
Sbjct: 297 aggacgaggcggacggaggtctggatctcgcgggaggtaatggtgggcttcttgttgtag 238
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| | |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 237 cgggcgagcttggcggactccgcggccagcttctcgaagatgtcgttgatgaaggagttc 178
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||
Sbjct: 177 atgatggacatggccttggaggagatgccgatgtccgggtgcacctgcttcaggaccttg 118
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttcttctcg 546
||||||||||||||||| |||||||| |||||| |||||||| ||||||||||||||
Sbjct: 117 aagatgtagatcttgtaggtctccacgctcttcttgcccttcttcctccccttcttctcg 58
Query: 547 ccaccctccttgcctgcg---gacttgcccgcggggagccgcttctcagccttgggc 600
|| ||||||||||| ||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 57 ccgccctccttgccggcggacgacttgcccgccgggagccgcttctccgccttgggc 1
>gb|BG240440.1|BG240440 OV1_30_A12.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 555
Score = 474 bits (239), Expect = e-132
Identities = 394/446 (88%), Gaps = 6/446 (1%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 522 gtgaacttggtgacggccttggtgccctcagagacggcgtgcttggcgagctccccgggg 463
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||| || || |||||||| ||||||||||||||
Sbjct: 462 aggacgaggcggacggaggtctggatctcccgagaagtgatggtgggcttcttgttgtag 403
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| ||||| | || |||||||||||||||||||||||||| ||||||
Sbjct: 402 cgggcgagcttggcggcctcgccggcgagcttctcgaagatgtcgttgatgaacgagttc 343
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 342 atgatggacatggccttggaggagatgccgatgtccgggtgcacctgcttcagcaccttg 283
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttcttctcg 546
|||||||||||||||||||||||||| |||||| |||||||| ||| ||||||||
Sbjct: 282 aagatgtagatcttgtacgtctccacgctcttcttgcccttcttccgacccctcttctcg 223
Query: 547 ccaccctccttgcctgcggacttgcccgcggggagccgcttctcagccttgggcttcttc 606
|| |||||||||| |||||||||||||| ||||| |||||||| |||||||||||||||
Sbjct: 222 ccgccctccttgctggcggacttgcccgccgggagacgcttctccgccttgggcttcttc 163
Query: 607 cccgccgtggccttctcc------gccgccggctcctcctcggcaggcttcttggcggcg 660
||||| | || ||||||| ||||| | |||||||| | |||||||| || ||
Sbjct: 162 cccgcggggggcttctccgccggggccgcggattcctcctccacgggcttcttcgctgcc 103
Query: 661 ggcttcttctcggccttgggcgccat 686
||||||||||| ||||||||||||||
Sbjct: 102 ggcttcttctccgccttgggcgccat 77
>gb|CW128767.1|CW128767 104_510_11114194_148_34755_039 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11114194, DNA
sequence
Length = 652
Score = 472 bits (238), Expect = e-131
Identities = 346/382 (90%)
Strand = Plus / Plus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 202 gtgaacttggtgacggccttggtgccctcagagacggcgtgcttggcgagctccccgggg 261
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||| || || |||||||| ||||||||||||||
Sbjct: 262 aggacgaggcggacggaggtctggatctcccgagaagtgatggtgggcttcttgttgtag 321
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| ||||| | || |||||||||||||||||||||||||| ||||||
Sbjct: 322 cgggcgagcttggcggcctcgccggcgagcttctcgaagatgtcgttgatgaacgagttc 381
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 382 atgatggacatggccttggaggagatgccgatgtccgggtgcacctgcttcagcaccttg 441
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttcttctcg 546
|||||||||||||||||||||||||| |||||| |||||||| ||| ||||||||
Sbjct: 442 aagatgtagatcttgtacgtctccacgctcttcttgcccttcttccgacccctcttctcg 501
Query: 547 ccaccctccttgcctgcggacttgcccgcggggagccgcttctcagccttgggcttcttc 606
|| |||||||||| |||||||||||||| ||||| |||||||| |||||||||||||||
Sbjct: 502 ccgccctccttgctggcggacttgcccgccgggagacgcttctccgccttgggcttcttc 561
Query: 607 cccgccgtggccttctccgccg 628
||||| | || |||||||||||
Sbjct: 562 cccgcggggggcttctccgccg 583
>gb|AW564395.1|AW564395 LG1_292_F12.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 568
Score = 472 bits (238), Expect = e-131
Identities = 390/440 (88%), Gaps = 3/440 (0%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 513 gtgaacttggtgacggccttggttccctcggagacggcgtgcttggcgagctctccgggg 454
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||| |||||||| |||||||||||||| |||||||| |||||||||||||||
Sbjct: 453 aggacgaggcgcacggaggtttggatctcgcgggaggtgatggtgggcttcttgttgtac 394
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
||||| |||||||| ||||| | || ||||||||||||||||| |||||||||||||||
Sbjct: 393 cgcgcgagcttggcggcctcgccggcgagcttctcgaagatgtcattgatgaaggagttc 334
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||
Sbjct: 333 atgatggacatggccttggaggagatgccgatgtcggggtgcacctgcttcagcaccttg 274
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttcttctcg 546
||||||||||| ||||| |||||||| |||||| ||||||||||||||||||||||||
Sbjct: 273 aagatgtagattttgtaggtctccacgctcttcttggccttcttcttccccttcttctcg 214
Query: 547 ccaccctccttgcctgcggacttgcccgcggggagccgcttctcagccttgggcttcttc 606
|| |||||||| || | ||||||| ||||| || |||||||| ||||||||||||||
Sbjct: 213 ccgccctccttaccggaggacttggaggcgggcaggcgcttctcggccttgggcttcttt 154
Query: 607 cccgccgtggccttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttc 666
|| || | |||||||||||| | ||||| |||| |||||||| | || ||||||
Sbjct: 153 cctgcgggcgccttctccgccttc---tcctcggcggccggcttcttctccgctggcttc 97
Query: 667 ttctcggccttgggcgccat 686
||||||||||||||||||||
Sbjct: 96 ttctcggccttgggcgccat 77
>gb|BE355445.1|BE355445 DG1_114_A03.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 452
Score = 472 bits (238), Expect = e-131
Identities = 350/388 (90%), Gaps = 12/388 (3%)
Strand = Plus / Minus
Query: 311 cgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtaccgcg 370
||||||| || |||||||||||||||||||| |||||||| |||||||||||||| ||||
Sbjct: 452 cgaggcgcaccgaggtctggatctcgcgggaggtgatggtgggcttcttgttgtagcgcg 393
Query: 371 ccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttcatga 430
|||||||||| | ||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 392 ccagcttggcggactcggccgcaagcttctcgaagatgtcgttgatgaaggagttcatga 333
Query: 431 tggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttgaaga 490
||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 332 tggacatggccttggacgagatgccgatgtccgggtgcacctgcttgagcaccttgaaga 273
Query: 491 tgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttctt---ctcgc 547
||||||||||||| |||||||| |||||||| |||||||||||||||||||| |||||
Sbjct: 272 tgtagatcttgtaggtctccacggacttcttcgccttcttcttccccttcttgccctcgc 213
Query: 548 caccctccttgcctgcggacttgcccgcggggagccgcttctcagccttgggcttcttcc 607
| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 212 cgccctccttgccggcggacttgcccgcggggagccgcttctcggccttgggcttcttcc 153
Query: 608 ccgccgtggccttctccgc---------cgccggctcctcctcggcaggcttcttggcgg 658
|||||| |||||||||||| ||| ||||||||||| || |||||||| || |
Sbjct: 152 ccgccggggccttctccgccttctcggtcgcgggctcctcctccgcgggcttcttcgccg 93
Query: 659 cgggcttcttctcggccttgggcgccat 686
| ||||||||||| |||||||| |||||
Sbjct: 92 ccggcttcttctccgccttgggtgccat 65
>gb|BE593143.1|BE593143 WS1_98_A10.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 596
Score = 472 bits (238), Expect = e-131
Identities = 390/440 (88%), Gaps = 3/440 (0%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 459 gtgaacttggtgacggccttggttccctcggagacggcgtgcttggcgagctctccgggg 400
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||| |||||||| |||||||||||||| |||||||| |||||||||||||||
Sbjct: 399 aggacgaggcgcacggaggtttggatctcgcgggaggtgatggtgggcttcttgttgtac 340
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
||||| |||||||| ||||| | || ||||||||||||||||| |||||||||||||||
Sbjct: 339 cgcgcgagcttggcggcctcgccggcgagcttctcgaagatgtcattgatgaaggagttc 280
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||
Sbjct: 279 atgatggacatggccttggaggagatgccgatgtcggggtgcacctgcttcagcaccttg 220
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttcttctcg 546
||||||||||| ||||| |||||||| |||||| ||||||||||||||||||||||||
Sbjct: 219 aagatgtagattttgtaggtctccacgctcttcttggccttcttcttccccttcttctcg 160
Query: 547 ccaccctccttgcctgcggacttgcccgcggggagccgcttctcagccttgggcttcttc 606
|| |||||||| || | ||||||| ||||| || |||||||| ||||||||||||||
Sbjct: 159 ccgccctccttaccggaggacttggaggcgggcaggcgcttctcggccttgggcttcttt 100
Query: 607 cccgccgtggccttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttc 666
|| || | |||||||||||| | ||||| |||| |||||||| | || ||||||
Sbjct: 99 cctgcgggcgccttctccgccttc---tcctcggcggccggcttcttctccgctggcttc 43
Query: 667 ttctcggccttgggcgccat 686
||||||||||||||||||||
Sbjct: 42 ttctcggccttgggcgccat 23
>gb|BG488106.1|BG488106 RHIZ2_63_D10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 514
Score = 472 bits (238), Expect = e-131
Identities = 346/382 (90%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 400 gtgaacttggtgacggccttggtgccctcagagacggcgtgcttggcgagctccccgggg 341
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||| || || |||||||| ||||||||||||||
Sbjct: 340 aggacgaggcggacggaggtctggatctcccgagaagtgatggtgggcttcttgttgtag 281
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| ||||| | || ||||||||||||||||| |||||||||||||||
Sbjct: 280 cgggcgagcttggcggcctcgccggcgagcttctcgaagatgtcattgatgaaggagttc 221
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||
Sbjct: 220 atgatggacatggccttggaggagataccgatgtccgggtgcacctgcttcagcaccttg 161
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttcttctcg 546
|||||||||||||||||||||||||| |||||| |||||||| ||| ||||||||
Sbjct: 160 aagatgtagatcttgtacgtctccacgctcttcttgcccttcttccgacccctcttctcg 101
Query: 547 ccaccctccttgcctgcggacttgcccgcggggagccgcttctcagccttgggcttcttc 606
|| |||||||||| |||||||||||||| ||||| |||||||| |||||||||||||||
Sbjct: 100 ccgccctccttgctggcggacttgcccgccgggagacgcttctccgccttgggcttcttc 41
Query: 607 cccgccgtggccttctccgccg 628
||||| | ||||||||||||||
Sbjct: 40 cccgcgggggccttctccgccg 19
>gb|CD431873.1|CD431873 ETH1_11_A02.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_11_A02_A002 5', mRNA sequence
Length = 667
Score = 472 bits (238), Expect = e-131
Identities = 390/440 (88%), Gaps = 3/440 (0%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 537 gtgaacttggtgacggccttggttccctcggagacggcgtgcttggcgagctctccgggg 478
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||| |||||||| |||||||||||||| |||||||| |||||||||||||||
Sbjct: 477 aggacgaggcgcacggaggtttggatctcgcgggaggtgatggtgggcttcttgttgtac 418
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
||||| |||||||| ||||| | || ||||||||||||||||| |||||||||||||||
Sbjct: 417 cgcgcgagcttggcggcctcgccggcgagcttctcgaagatgtcattgatgaaggagttc 358
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||
Sbjct: 357 atgatggacatggccttggaggagatgccgatgtcggggtgcacctgcttcagcaccttg 298
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttcttctcg 546
||||||||||| ||||| |||||||| |||||| ||||||||||||||||||||||||
Sbjct: 297 aagatgtagattttgtaggtctccacgctcttcttggccttcttcttccccttcttctcg 238
Query: 547 ccaccctccttgcctgcggacttgcccgcggggagccgcttctcagccttgggcttcttc 606
|| |||||||| || | ||||||| ||||| || |||||||| ||||||||||||||
Sbjct: 237 ccgccctccttaccggaggacttggaggcgggcaggcgcttctcggccttgggcttcttt 178
Query: 607 cccgccgtggccttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttc 666
|| || | |||||||||||| | ||||| |||| |||||||| | || ||||||
Sbjct: 177 cctgcgggcgccttctccgccttc---tcctcggcggccggcttcttctccgctggcttc 121
Query: 667 ttctcggccttgggcgccat 686
||||||||||||||||||||
Sbjct: 120 ttctcggccttgggcgccat 101
>gb|CN150853.1|CN150853 WOUND1_71_G11.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_71_G11_A002 5', mRNA sequence
Length = 765
Score = 472 bits (238), Expect = e-131
Identities = 390/440 (88%), Gaps = 3/440 (0%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 519 gtgaacttggtgacggccttggttccctcggagacggcgtgcttggcgagctctccgggg 460
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||| |||||||| |||||||||||||| |||||||| |||||||||||||||
Sbjct: 459 aggacgaggcgcacggaggtttggatctcgcgggaggtgatggtgggcttcttgttgtac 400
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
||||| |||||||| ||||| | || ||||||||||||||||| |||||||||||||||
Sbjct: 399 cgcgcgagcttggcggcctcgccggcgagcttctcgaagatgtcattgatgaaggagttc 340
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||
Sbjct: 339 atgatggacatggccttggaggagatgccgatgtcggggtgcacctgcttcagcaccttg 280
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttcttctcg 546
||||||||||| ||||| |||||||| |||||| ||||||||||||||||||||||||
Sbjct: 279 aagatgtagattttgtaggtctccacgctcttcttggccttcttcttccccttcttctcg 220
Query: 547 ccaccctccttgcctgcggacttgcccgcggggagccgcttctcagccttgggcttcttc 606
|| |||||||| || | ||||||| ||||| || |||||||| ||||||||||||||
Sbjct: 219 ccgccctccttaccggaggacttggaggcgggcaggcgcttctcggccttgggcttcttt 160
Query: 607 cccgccgtggccttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttc 666
|| || | |||||||||||| | ||||| |||| |||||||| | || ||||||
Sbjct: 159 ccagcgggcgccttctccgccttc---tcctcggcggccggcttcttctccgctggcttc 103
Query: 667 ttctcggccttgggcgccat 686
||||||||||||||||||||
Sbjct: 102 ttctcggccttgggcgccat 83
>gb|CN126047.1|CN126047 RHOH1_14_H01.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_14_H01_A002 5', mRNA sequence
Length = 770
Score = 464 bits (234), Expect = e-129
Identities = 389/440 (88%), Gaps = 3/440 (0%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 519 gtgaacttggtgacggccttggttccctcggagacggcgtgcttggcgagctctccgggg 460
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||| |||||||| |||||||||||||| |||||||| |||||||||||||||
Sbjct: 459 aggacgaggcgcacggaggtttggatctcgcgggaggtgatggtgggcttcttgttgtac 400
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
||||| |||||||| ||||| | || ||||||||||||||| | |||||||||||||||
Sbjct: 399 cgcgcgagcttggcggcctcgccggcgagcttctcgaagatgccattgatgaaggagttc 340
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||
Sbjct: 339 atgatggacatggccttggaggagatgccgatgtcggggtgcacctgcttcagcaccttg 280
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttcttctcg 546
||||||||||| ||||| |||||||| |||||| ||||||||||||||||||||||||
Sbjct: 279 aagatgtagattttgtaggtctccacgctcttcttggccttcttcttccccttcttctcg 220
Query: 547 ccaccctccttgcctgcggacttgcccgcggggagccgcttctcagccttgggcttcttc 606
|| |||||||| || | ||||||| ||||| || |||||||| ||||||||||||||
Sbjct: 219 ccgccctccttaccggaggacttggaggcgggcaggcgcttctcggccttgggcttcttt 160
Query: 607 cccgccgtggccttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttc 666
|| || | |||||||||||| | ||||| |||| |||||||| | || ||||||
Sbjct: 159 cctgcgggcgccttctccgccttc---tcctcggcggccggcttcttctccgctggcttc 103
Query: 667 ttctcggccttgggcgccat 686
||||||||||||||||||||
Sbjct: 102 ttctcggccttgggcgccat 83
>gb|CX608442.1|CX608442 ANR1_38_D08.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_38_D08_A002 5', mRNA sequence
Length = 635
Score = 464 bits (234), Expect = e-129
Identities = 389/440 (88%), Gaps = 3/440 (0%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 511 gtgaacttggtgacggccttggttccctcggagacggcgtgcttggcgagctctccgggg 452
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||| |||||||| |||||||||||||| |||||||| |||||||||||||||
Sbjct: 451 aggacgaggcgcacggaggtttggatctcgcgggaggtgatggtgggcttcttgttgtac 392
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
||||| |||||||| ||||| | || ||||||||||||||||| ||||||||||||| |
Sbjct: 391 cgcgcgagcttggcggcctcgccggcgagcttctcgaagatgtcattgatgaaggagtcc 332
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||
Sbjct: 331 atgatggacatggccttggaggagatgccgatgtcggggtgcacctgcttcagcaccttg 272
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttcttctcg 546
||||||||||| ||||| |||||||| |||||| ||||||||||||||||||||||||
Sbjct: 271 aagatgtagattttgtaggtctccacgctcttcttggccttcttcttccccttcttctcg 212
Query: 547 ccaccctccttgcctgcggacttgcccgcggggagccgcttctcagccttgggcttcttc 606
|| |||||||| || | ||||||| ||||| || |||||||| ||||||||||||||
Sbjct: 211 ccgccctccttaccggaggacttggaggcgggcaggcgcttctcggccttgggcttcttt 152
Query: 607 cccgccgtggccttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttc 666
|| || | |||||||||||| | ||||| |||| |||||||| | || ||||||
Sbjct: 151 cctgcgggcgccttctccgccttc---tcctcggcggccggcttcttctccgctggcttc 95
Query: 667 ttctcggccttgggcgccat 686
||||||||||||||||||||
Sbjct: 94 ttctcggccttgggcgccat 75
>gb|CF071535.1|CF071535 FE1_17_C03.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_17_C03_A002 3', mRNA sequence
Length = 466
Score = 460 bits (232), Expect = e-128
Identities = 280/296 (94%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 gtgaacttggtgacagccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 271
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 270 aggacgaggcgcaccgaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 211
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|||||||||||||| | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 210 cgcgccagcttggcggactcggccgcaagcttctcgaagatgtcgttgatgaaggagttc 151
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 150 atgatggacatggccttggacgagatgccgatgtccgggtgcacctgcttgagcaccttg 91
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttctt 542
||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||
Sbjct: 90 aagatgtagatcttgtaggtctccacggacttcttcgccttcttcttccccttctt 35
>gb|BG052252.1|BG052252 RHIZ2_12_B05.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 464
Score = 454 bits (229), Expect = e-126
Identities = 318/347 (91%), Gaps = 3/347 (0%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 350 gtgaacttggtgacggccttggtaccctcggagacggcgtgcttggcgagctccccgggg 291
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||
Sbjct: 290 aggacgaggcggacggaggtctggatctcgcgggaggtaatggtgggcttcttgttgtag 231
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| | |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 230 cgggcgagcttggcggactccgcggccagcttctcgaagatgtcgttgatgaaggagttc 171
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||
Sbjct: 170 atgatggacatggccttggaggagatgccgatgtccgggtgcacctgcttcaggaccttg 111
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttcttctcg 546
||||||||||||||||| |||||||| |||||| |||||||| ||||||||||||||
Sbjct: 110 aagatgtagatcttgtaggtctccacgctcttcttccccttcttcctccccttcttctcg 51
Query: 547 ccaccctccttgcctgcg---gacttgcccgcggggagccgcttctc 590
|| ||||||||||| || ||||||||||| ||||||||||||||
Sbjct: 50 ccgccctccttgccgacggacgacttgcccgccgggagccgcttctc 4
>gb|BE917630.1|BE917630 OV1_6_B04.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 493
Score = 452 bits (228), Expect = e-125
Identities = 399/454 (87%), Gaps = 14/454 (3%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggt-gccctcg-gagacggcgtgcttggcgagctcgccgg 304
||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||| ||||
Sbjct: 465 gtgaacttggtgacggccttggttgccctcgtgagacggcgtgcttggcgagctccccgg 406
Query: 305 ggaggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgt 364
||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||
Sbjct: 405 ggaggacgaggcggacggaagtctggatctctcgggacgtgatggtgggcttcttgttgt 346
Query: 365 accgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagt 424
| || || |||||||| | ||| || || |||||||||||||||||||||||||||||||
Sbjct: 345 agcgggcgagcttggcggactcggcggcgagcttctcgaagatgtcgttgatgaaggagt 286
Query: 425 tcatgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcacct 484
|||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||
Sbjct: 285 tcatgatggacatggccttggaggagatgccgatgtccgggtgcacctgcttgagcacct 226
Query: 485 tgaagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttcttct 544
||||||||||||||||||| |||||||| |||||| ||||||||||| ||||||||
Sbjct: 225 tgaagatgtagatcttgtaggtctccacgctcttcttggccttcttcttgcccttcttgc 166
Query: 545 cgccaccctccttgcctgc---ggacttgcccgcggggagccgcttctcagccttgggct 601
| | || |||||||| || |||||||||||||||||| |||||||| ||||| ||||
Sbjct: 165 cctcgccgtccttgccggcgctggacttgcccgcggggaggcgcttctccgccttcggct 106
Query: 602 tcttccccgccgtg---------gccttctccgccgccggctcctcctcggcaggcttct 652
|||||||||||| | |||||||| ||||| ||||||||||| || |||||||
Sbjct: 105 tcttccccgccggggtcttctccgccttctcggccgcgggctcctcctccgcgggcttct 46
Query: 653 tggcggcgggcttcttctcggccttgggcgccat 686
| || || ||||||||||| ||||||||||||||
Sbjct: 45 tcgccgccggcttcttctccgccttgggcgccat 12
>gb|BE593453.1|BE593453 WS1_98_A10.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 487
Score = 436 bits (220), Expect = e-120
Identities = 366/414 (88%), Gaps = 3/414 (0%)
Strand = Plus / Minus
Query: 273 ctcggagacggcgtgcttggcgagctcgccggggaggacgaggcggacggaggtctggat 332
||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 487 ctcggagacggcgtgcttggcgagctctccggggaggacgaggcgcacggaggtttggat 428
Query: 333 ctcgcgggacgtgatggtaggcttcttgttgtaccgcgccagcttggccgcctccgccgc 392
||||||||| |||||||| |||||||||||||||||||| |||||||| ||||| | ||
Sbjct: 427 ctcgcgggaggtgatggtgggcttcttgttgtaccgcgcgagcttggcggcctcgccggc 368
Query: 393 cagcttctcgaagatgtcgttgatgaaggagttcatgatggacatggccttggacgagat 452
||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 367 gagcttctcgaagatgtcattgatgaaggagttcatgatggacatggccttggaggagat 308
Query: 453 gccaatgtccgggtgcacctgcttcagcaccttgaagatgtagatcttgtacgtctccac 512
||| ||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 307 gccgatgtcggggtgcacctgcttcagcaccttgaagatgtagattttgtaggtctccac 248
Query: 513 cgacttctttgccttcttcttccccttcttctcgccaccctccttgcctgcggacttgcc 572
|||||| |||||||||||||||||||||||||| |||||||| || | |||||||
Sbjct: 247 gctcttcttggccttcttcttccccttcttctcgccgccctccttaccggaggacttgga 188
Query: 573 cgcggggagccgcttctcagccttgggcttcttccccgccgtggccttctccgccgccgg 632
||||| || |||||||| |||||||||||||| || || | |||||||||||| |
Sbjct: 187 ggcgggcaggcgcttctcggccttgggcttctttcctgcgggcgccttctccgccttc-- 130
Query: 633 ctcctcctcggcaggcttcttggcggcgggcttcttctcggccttgggcgccat 686
||||| |||| |||||||| | || ||||||||||||||||||||||||||
Sbjct: 129 -tcctcggcggccggcttcttctccgctggcttcttctcggccttgggcgccat 77
>gb|AW286565.1|AW286565 LG1_334_E01.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 469
Score = 428 bits (216), Expect = e-118
Identities = 240/248 (96%)
Strand = Plus / Minus
Query: 237 ctaggagctagtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgag 296
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 248 ctaggagctggtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgag 189
Query: 297 ctcgccggggaggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggctt 356
||| ||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 188 ctcaccggggaggacaaggcggacggaggtctggatctcccgggacgtgatggtgggctt 129
Query: 357 cttgttgtaccgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgat 416
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 128 cttgttgtaccgcgccagcttggccgcctccgccgccagcttctcaaagatgtcgttgat 69
Query: 417 gaaggagttcatgatggacatggccttggacgagatgccaatgtccgggtgcacctgctt 476
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 68 gaaggagttcatgatggacatggccttggacgagatgccgatgtccgggtgcacctgctt 9
Query: 477 cagcacct 484
||||||||
Sbjct: 8 cagcacct 1
>gb|CW317075.1|CW317075 104_808_11473223_116_35851_084 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11473223, DNA
sequence
Length = 600
Score = 426 bits (215), Expect = e-117
Identities = 260/275 (94%)
Strand = Plus / Plus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gtgaacttggtgacagccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 385
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 386 aggacgaggcgcaccgaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 445
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|||||||||||||| | ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 446 cgcgccagcttggcggactcggccgcaagcttctcgaagatgtcgttgatgaaggagttc 505
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 506 atgatggacatggccttggacgagatgccgatgtccgggtgcacctgcttgagcaccttg 565
Query: 487 aagatgtagatcttgtacgtctccaccgacttctt 521
||||||||||||||||| |||||||| ||||||||
Sbjct: 566 aagatgtagatcttgtaggtctccacggacttctt 600
>gb|BZ341857.1|BZ341857 ic79b05.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ic79b05 5', DNA sequence
Length = 685
Score = 424 bits (214), Expect = e-117
Identities = 253/266 (95%)
Strand = Plus / Plus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 91 gtgaacttggtgacggccttggtgccctcagagacggcgtgcttcgcgagctccccgggg 150
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 151 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtac 210
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
||||| |||||||| ||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 211 cgcgcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 270
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 271 atgatggacatggccttggaggagatgccgatgtccgggtgcacctgcttcagcaccttg 330
Query: 487 aagatgtagatcttgtacgtctccac 512
||||||||||||||||||||||||||
Sbjct: 331 aagatgtagatcttgtacgtctccac 356
Score = 139 bits (70), Expect = 4e-031
Identities = 124/142 (87%)
Strand = Plus / Plus
Query: 545 cgccaccctccttgcctgcggacttgcccgcggggagccgcttctcagccttgggcttct 604
|||| ||||||||||| ||||||||||| ||||| || |||||||| || ||||||||||
Sbjct: 395 cgccgccctccttgccggcggacttgccagcgggcagacgcttctccgctttgggcttct 454
Query: 605 tccccgccgtggccttctccgccgccggctcctcctcggcaggcttcttggcggcgggct 664
|||| |||| |||||||| ||||| ||||||||||| || ||||||| || ||||| |
Sbjct: 455 tcccggccggcgccttctcggccgcgggctcctcctccgccagcttcttcgccgcgggtt 514
Query: 665 tcttctcggccttgggcgccat 686
||||||||||||||||||||||
Sbjct: 515 tcttctcggccttgggcgccat 536
>gb|CL152064.1|CL152064 104_335_10779694_116_31364_094 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10779694, DNA
sequence
Length = 690
Score = 424 bits (214), Expect = e-117
Identities = 253/266 (95%)
Strand = Plus / Plus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 277 gtgaacttggtgacggccttggtgccctcagagacggcgtgcttcgcgagctccccgggg 336
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 337 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtac 396
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
||||| |||||||| ||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 397 cgcgcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 456
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 457 atgatggacatggccttggaggagatgccgatgtccgggtgcacctgcttcagcaccttg 516
Query: 487 aagatgtagatcttgtacgtctccac 512
||||||||||||||||||||||||||
Sbjct: 517 aagatgtagatcttgtacgtctccac 542
Score = 97.6 bits (49), Expect = 1e-018
Identities = 85/97 (87%)
Strand = Plus / Plus
Query: 545 cgccaccctccttgcctgcggacttgcccgcggggagccgcttctcagccttgggcttct 604
|||| ||||||||||| ||||||||||| ||||| || |||||||| || ||||||||||
Sbjct: 581 cgccgccctccttgccggcggacttgccagcgggcagacgcttctccgctttgggcttct 640
Query: 605 tccccgccgtggccttctccgccgccggctcctcctc 641
|||| |||| |||||||| ||||| |||||||||||
Sbjct: 641 tcccggccggcgccttctcggccgcgggctcctcctc 677
>gb|CW155043.1|CW155043 104_557_11145924_116_36362_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11145924, DNA
sequence
Length = 743
Score = 424 bits (214), Expect = e-117
Identities = 253/266 (95%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 542 gtgaacttggtgacggccttggtgccctcagagacggcgtgcttcgcgagctccccgggg 483
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 482 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtac 423
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
||||| |||||||| ||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 422 cgcgcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 363
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 362 atgatggacatggccttggaggagatgccgatgtccgggtgcacctgcttcagcaccttg 303
Query: 487 aagatgtagatcttgtacgtctccac 512
||||||||||||||||||||||||||
Sbjct: 302 aagatgtagatcttgtacgtctccac 277
Score = 139 bits (70), Expect = 4e-031
Identities = 124/142 (87%)
Strand = Plus / Minus
Query: 545 cgccaccctccttgcctgcggacttgcccgcggggagccgcttctcagccttgggcttct 604
|||| ||||||||||| ||||||||||| ||||| || |||||||| || ||||||||||
Sbjct: 238 cgccgccctccttgccggcggacttgccagcgggcagacgcttctccgctttgggcttct 179
Query: 605 tccccgccgtggccttctccgccgccggctcctcctcggcaggcttcttggcggcgggct 664
|||| |||| |||||||| ||||| ||||||||||| || ||||||| || ||||| |
Sbjct: 178 tcccggccggcgccttctcggccgcgggctcctcctccgccagcttcttcgccgcgggtt 119
Query: 665 tcttctcggccttgggcgccat 686
||||||||||||||||||||||
Sbjct: 118 tcttctcggccttgggcgccat 97
>gb|CW155044.1|CW155044 104_557_11145924_148_36361_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11145924, DNA
sequence
Length = 679
Score = 424 bits (214), Expect = e-117
Identities = 253/266 (95%)
Strand = Plus / Plus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 342 gtgaacttggtgacggccttggtgccctcagagacggcgtgcttcgcgagctccccgggg 401
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 402 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtac 461
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
||||| |||||||| ||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 462 cgcgcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 521
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 522 atgatggacatggccttggaggagatgccgatgtccgggtgcacctgcttcagcaccttg 581
Query: 487 aagatgtagatcttgtacgtctccac 512
||||||||||||||||||||||||||
Sbjct: 582 aagatgtagatcttgtacgtctccac 607
Score = 44.1 bits (22), Expect = 0.019
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 545 cgccaccctccttgcctgcggacttgcccgcggg 578
|||| ||||||||||| ||||||||||| |||||
Sbjct: 645 cgccgccctccttgccggcggacttgccagcggg 678
>gb|BE599367.1|BE599367 PI1_88_F07.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 539
Score = 424 bits (214), Expect = e-117
Identities = 304/334 (91%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gtgaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 275
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||| | ||| |||||||| ||||| ||||||||
Sbjct: 274 aggacgaggcggacggaggtctggatctccctggaggtgatggtgggctttttgttgtag 215
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
||||| |||||||| || || | || |||||||||||||| |||||||||||||| |||
Sbjct: 214 cgcgcgagcttggcggcttcgccggcgagcttctcgaagatatcgttgatgaaggaattc 155
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| |||| ||||| ||||||||||||||||||
Sbjct: 154 atgatggacatggccttggaggagatgccggtgtcggggtggacctgcttcagcaccttg 95
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttcttctcg 546
||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||| |||
Sbjct: 94 aagatgtagatcttgtaggtctccaccgacttcttagccttcttcttgcccttcttgtcg 35
Query: 547 ccaccctccttgcctgcggacttgcccgcgggga 580
|| ||||||||||| || ||||||||||| ||||
Sbjct: 34 cccccctccttgccggccgacttgcccgccggga 1
>gb|BF480763.1|BF480763 FM1_14_F11.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 592
Score = 424 bits (214), Expect = e-117
Identities = 253/266 (95%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 422 gtgaacttggtgacggccttggtgccctcagagacggcgtgcttcgcgagctccccgggg 363
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 362 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtac 303
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
||||| |||||||| ||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 302 cgcgcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 243
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 242 atgatggacatggccttggaggagatgccgatgtccgggtgcacctgcttcagcaccttg 183
Query: 487 aagatgtagatcttgtacgtctccac 512
||||||||||||||||||||||||||
Sbjct: 182 aagatgtagatcttgtacgtctccac 157
Score = 115 bits (58), Expect = 6e-024
Identities = 103/118 (87%)
Strand = Plus / Minus
Query: 545 cgccaccctccttgcctgcggacttgcccgcggggagccgcttctcagccttgggcttct 604
|||| ||||||||||| ||||||||||| |||||||| |||||||| |||||||||||||
Sbjct: 118 cgccgccctccttgccggcggacttgccagcggggagacgcttctccgccttgggcttct 59
Query: 605 tccccgccgtggccttctccgccgccggctcctcctcggcaggcttcttggcggcggg 662
|||| |||| |||||||| ||||| ||||||||||| || ||||||| || |||||
Sbjct: 58 tcccggccggcgccttctcggccgcgggctcctcctccgccagcttcttcgccgcggg 1
>gb|BF481909.1|BF481909 FM1_22_H04.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 506
Score = 424 bits (214), Expect = e-117
Identities = 280/302 (92%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 306 gtgaacttggtgacggccttggttccctcggagacggcgtgcttggcgagctctccgggg 247
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||| |||||||| |||||||||||||| |||||||| |||||||||||||||
Sbjct: 246 aggacgaggcgcacggaggtttggatctcgcgggaggtgatggtgggcttcttgttgtac 187
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
||||| |||||||| ||||| | || |||||||||||||||||||||||||||||||||
Sbjct: 186 cgcgcgagcttggcggcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 127
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||
Sbjct: 126 atgatggacatggccttggaggagatgccgatgtcggggtgcacctgcttcagcaccttg 67
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttcttctcg 546
||||||||||| ||||| |||||||| |||||| ||||||||||||||||||||||||
Sbjct: 66 aagatgtagattttgtaggtctccacgctcttcttggccttcttcttccccttcttctcg 7
Query: 547 cc 548
||
Sbjct: 6 cc 5
>gb|BF656458.1|BF656458 FM1_50_B08.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 556
Score = 424 bits (214), Expect = e-117
Identities = 280/302 (92%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 303 gtgaacttggtgacggccttggttccctcggagacggcgtgcttggcgagctctccgggg 244
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||| |||||||| |||||||||||||| |||||||| |||||||||||||||
Sbjct: 243 aggacgaggcgcacggaggtttggatctcgcgggaggtgatggtgggcttcttgttgtac 184
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
||||| |||||||| ||||| | || |||||||||||||||||||||||||||||||||
Sbjct: 183 cgcgcgagcttggcggcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 124
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||
Sbjct: 123 atgatggacatggccttggaggagatgccgatgtcggggtgcacctgcttcagcaccttg 64
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttcttctcg 546
||||||||||| ||||| |||||||| |||||| ||||||||||||||||||||||||
Sbjct: 63 aagatgtagattttgtaggtctccacgctcttcttggccttcttcttccccttcttctcg 4
Query: 547 cc 548
||
Sbjct: 3 cc 2
>gb|CD213618.1|CD213618 HS1_52_G12.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_52_G12_A012 3', mRNA sequence
Length = 611
Score = 424 bits (214), Expect = e-117
Identities = 253/266 (95%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||||||||| ||||||||||||||||||||| | ||||||
Sbjct: 369 gtgaacttggtgacggccttggtgccctcagagacggcgtgcttggcgagccccccgggg 310
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 309 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtac 250
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
||||| |||||||| ||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 249 cgcgcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 190
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 189 atgatggacatggccttggaggagatgccgatgtccgggtgcacctgcttcagcaccttg 130
Query: 487 aagatgtagatcttgtacgtctccac 512
||||||||||||||||||||||||||
Sbjct: 129 aagatgtagatcttgtacgtctccac 104
Score = 87.7 bits (44), Expect = 1e-015
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 545 cgccaccctccttgcctgcggacttgcccgcggggagccgcttctcagccttgggcttct 604
|||| ||||||||||| ||||||||||| |||||||| |||||||| |||||||||||||
Sbjct: 65 cgccgccctccttgccggcggacttgccagcggggagacgcttctccgccttgggcttct 6
Query: 605 tccc 608
||||
Sbjct: 5 tccc 2
>gb|CD213713.1|CD213713 HS1_52_G12.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_52_G12_A012 5', mRNA sequence
Length = 729
Score = 424 bits (214), Expect = e-117
Identities = 253/266 (95%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||||||||| ||||||||||||||||||||| | ||||||
Sbjct: 528 gtgaacttggtgacggccttggtgccctcagagacggcgtgcttggcgagccccccgggg 469
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 468 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtac 409
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
||||| |||||||| ||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 408 cgcgcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 349
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 348 atgatggacatggccttggaggagatgccgatgtccgggtgcacctgcttcagcaccttg 289
Query: 487 aagatgtagatcttgtacgtctccac 512
||||||||||||||||||||||||||
Sbjct: 288 aagatgtagatcttgtacgtctccac 263
Score = 163 bits (82), Expect = 3e-038
Identities = 127/142 (89%)
Strand = Plus / Minus
Query: 545 cgccaccctccttgcctgcggacttgcccgcggggagccgcttctcagccttgggcttct 604
|||| ||||||||||| ||||||||||| |||||||| |||||||| |||||||||||||
Sbjct: 224 cgccgccctccttgccggcggacttgccagcggggagacgcttctccgccttgggcttct 165
Query: 605 tccccgccgtggccttctccgccgccggctcctcctcggcaggcttcttggcggcgggct 664
|||| |||| | |||||||||||| ||||||||||| || ||||||| || |||||||
Sbjct: 164 tcccggccggcgtcttctccgccgcgggctcctcctccgccagcttcttcgccgcgggct 105
Query: 665 tcttctcggccttgggcgccat 686
||||||||||||||||||||||
Sbjct: 104 tcttctcggccttgggcgccat 83
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 306,347
Number of Sequences: 832831
Number of extensions: 306347
Number of successful extensions: 93315
Number of sequences better than 0.5: 163
Number of HSP's better than 0.5 without gapping: 163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92835
Number of HSP's gapped (non-prelim): 372
length of query: 777
length of database: 491,359,669
effective HSP length: 20
effective length of query: 757
effective length of database: 474,703,049
effective search space: 359350208093
effective search space used: 359350208093
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)