BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.149
(1197 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN152418.1|CN152418 WOUND1_81_H09.g1_A002 Wounded leaves... 973 0.0
gb|CF487936.1|CF487936 POL1_46_G01.g1_A002 Pollen Sorghum b... 922 0.0
gb|CN152333.1|CN152333 WOUND1_81_H09.b1_A002 Wounded leaves... 902 0.0
gb|CN126040.1|CN126040 RHOH1_14_G06.g1_A002 Acid- and alkal... 880 0.0
gb|BG649163.1|BG649163 EM1_77_B11.g1_A002 Embryo 1 (EM1) So... 878 0.0
gb|CF487849.1|CF487849 POL1_46_G01.b1_A002 Pollen Sorghum b... 817 0.0
gb|BG933591.1|BG933591 OV1_32_B11.g1_A002 Ovary 1 (OV1) Sor... 811 0.0
gb|BG103114.1|BG103114 RHIZ2_18_C12.g1_A003 Rhizome2 (RHIZ2... 791 0.0
gb|AW678569.1|AW678569 WS1_16_H06.g1_A002 Water-stressed 1 ... 785 0.0
gb|CD429217.1|CD429217 ETH1_3_E01.b1_A002 Ethylene-treated ... 724 0.0
gb|BM329969.1|BM329969 PIC1_45_E10.g1_A002 Pathogen-infecte... 716 0.0
gb|BE918513.1|BE918513 OV1_4_G09.g1_A002 Ovary 1 (OV1) Sorg... 704 0.0
gb|BG103298.1|BG103298 RHIZ2_18_C12.b1_A003 Rhizome2 (RHIZ2... 698 0.0
gb|BG052778.1|BG052778 RHIZ2_14_G07.g1_A003 Rhizome2 (RHIZ2... 696 0.0
gb|BE918770.1|BE918770 OV1_4_G09.b1_A002 Ovary 1 (OV1) Sorg... 690 0.0
gb|BG240609.1|BG240609 OV1_32_B11.b1_A002 Ovary 1 (OV1) Sor... 682 0.0
gb|BE366520.1|BE366520 PI1_34_B09.g1_A002 Pathogen induced ... 670 0.0
gb|CF428517.1|CF428517 PH1_15_D09.g1_A002 Phosphorous-defic... 670 0.0
gb|CN125950.1|CN125950 RHOH1_14_G06.b1_A002 Acid- and alkal... 648 0.0
gb|BM324198.1|BM324198 PIC1_25_E08.b1_A002 Pathogen-infecte... 642 0.0
gb|BG560038.1|BG560038 RHIZ2_68_F08.b1_A003 Rhizome2 (RHIZ2... 640 0.0
gb|AW678507.1|AW678507 WS1_16_H06.b1_A002 Water-stressed 1 ... 636 e-180
gb|BE362353.1|BE362353 DG1_86_C10.b1_A002 Dark Grown 1 (DG1... 626 e-177
gb|CD213543.1|CD213543 HS1_41_B02.g1_A012 Heat-shocked seed... 624 e-177
gb|BG052841.1|BG052841 RHIZ2_14_G07.b1_A003 Rhizome2 (RHIZ2... 603 e-170
gb|BM325519.1|BM325519 PIC1_45_E10.b1_A002 Pathogen-infecte... 599 e-169
gb|BE594510.1|BE594510 PI1_34_B09.b1_A002 Pathogen induced ... 597 e-169
gb|CD213453.1|CD213453 HS1_41_B02.b1_A012 Heat-shocked seed... 597 e-169
gb|BI643592.1|BI643592 DG1_90_D06.b1_A002 Dark Grown 1 (DG1... 579 e-163
gb|CF428434.1|CF428434 PH1_15_D09.b1_A002 Phosphorous-defic... 577 e-163
gb|BG050679.1|BG050679 FM1_71_D10.g1_A003 Floral-Induced Me... 569 e-160
gb|BE593246.1|BE593246 WS1_99_D04.g1_A002 Water-stressed 1 ... 553 e-155
gb|BE593660.1|BE593660 WS1_99_D04.b1_A002 Water-stressed 1 ... 553 e-155
gb|BM328700.1|BM328700 PIC1_25_E08.g1_A002 Pathogen-infecte... 547 e-154
gb|AI724706.1|AI724706 RHIZ1_26_A01.y2_A001 Rhizome1 (RHIZ1... 531 e-149
gb|BF422195.1|BF422195 FM1_13_A06.g1_A003 Floral-Induced Me... 529 e-148
gb|BF480817.1|BF480817 FM1_14_C08.b1_A003 Floral-Induced Me... 525 e-147
gb|BF422248.1|BF422248 FM1_13_A06.b1_A003 Floral-Induced Me... 515 e-144
gb|BE358248.1|BE358248 DG1_27_C08.b2_A002 Dark Grown 1 (DG1... 498 e-139
gb|BG558764.1|BG558764 RHIZ2_56_C04.b1_A003 Rhizome2 (RHIZ2... 486 e-135
gb|CF758342.1|CF758342 DSAF1_30_F02.g1_A011 Drought-stresse... 470 e-130
gb|CF758951.1|CF758951 DSAF1_38_E04.g1_A011 Drought-stresse... 430 e-118
gb|CF760153.1|CF760153 DSAF1_56_B06.b1_A011 Drought-stresse... 381 e-103
gb|CF761777.1|CF761777 DSAF1_80_G06.g1_A011 Drought-stresse... 381 e-103
gb|BG050836.1|BG050836 FM1_71_D10.b1_A003 Floral-Induced Me... 349 4e-094
gb|BF480866.1|BF480866 FM1_14_C08.g1_A003 Floral-Induced Me... 337 1e-090
gb|BE362922.2|BE362922 DG1_90_D06.g1_A002 Dark Grown 1 (DG1... 337 1e-090
gb|CF487781.1|CF487781 POL1_45_H06.g1_A002 Pollen Sorghum b... 317 1e-084
gb|CN127730.1|CN127730 RHOH1_24_E11.g3_A002 Acid- and alkal... 317 1e-084
gb|CN150657.1|CN150657 WOUND1_70_D10.g1_A002 Wounded leaves... 315 5e-084
gb|CW233972.1|CW233972 104_687_11213731_148_37378_072 Sorgh... 313 2e-083
gb|CN127366.1|CN127366 RHOH1_22_D02.g3_A002 Acid- and alkal... 307 1e-081
gb|CN127579.1|CN127579 RHOH1_23_G08.g3_A002 Acid- and alkal... 307 1e-081
gb|CN145357.1|CN145357 WOUND1_28_A05.g1_A002 Wounded leaves... 307 1e-081
gb|CN129864.1|CN129864 RHOH1_37_H08.g1_A002 Acid- and alkal... 305 5e-081
gb|CN141622.1|CN141622 OX1_52_G05.g1_A002 Oxidatively-stres... 305 5e-081
gb|CN134988.1|CN134988 OX1_29_G07.g1_A002 Oxidatively-stres... 297 1e-078
gb|AW677872.1|AW677872 WS1_11_F10.g1_A002 Water-stressed 1 ... 274 2e-071
gb|CD225983.1|CD225983 CCC1_42_H01.g1_A007 Callus culture/c... 268 1e-069
gb|CD223692.1|CD223692 CCC1_29_G04.g1_A007 Callus culture/c... 266 4e-069
gb|CF483652.1|CF483652 POL1_23_F10.g1_A002 Pollen Sorghum b... 266 4e-069
gb|CN141131.1|CN141131 OX1_49_B05.g1_A002 Oxidatively-stres... 264 2e-068
gb|CD225652.1|CD225652 CCC1_40_B09.g1_A007 Callus culture/c... 248 1e-063
gb|BE125018.1|BE125018 DG1_14_E01.b1_A002 Dark Grown 1 (DG1... 246 4e-063
gb|BG559552.1|BG559552 RHIZ2_68_F08.g1_A003 Rhizome2 (RHIZ2... 244 2e-062
gb|CD226282.1|CD226282 CCC1_44_H01.g1_A007 Callus culture/c... 240 2e-061
gb|BG649161.1|BG649161 EM1_77_A12.g1_A002 Embryo 1 (EM1) So... 234 2e-059
gb|CN141046.1|CN141046 OX1_49_B05.b1_A002 Oxidatively-stres... 228 9e-058
gb|CN127646.1|CN127646 RHOH1_24_E11.b1_A002 Acid- and alkal... 222 6e-056
gb|BM317857.1|BM317857 OV1_16_D06.b9_A002 Ovary 1 (OV1) Sor... 220 2e-055
gb|BG273447.1|BG273447 OV2_25_G11.b1_A002 Ovary 2 (OV2) Sor... 210 2e-052
gb|CN129784.1|CN129784 RHOH1_37_H08.b1_A002 Acid- and alkal... 210 2e-052
gb|BG649559.1|BG649559 EM1_80_H04.b1_A002 Embryo 1 (EM1) So... 206 3e-051
gb|BG560580.1|BG560580 RHIZ2_59_B09.b1_A003 Rhizome2 (RHIZ2... 204 1e-050
gb|CW233971.1|CW233971 104_687_11213731_116_37377_072 Sorgh... 200 2e-049
gb|CN127492.1|CN127492 RHOH1_23_G08.b1_A002 Acid- and alkal... 188 8e-046
gb|CW148563.1|CW148563 104_547_11142021_148_35008_091 Sorgh... 178 8e-043
gb|BM326454.1|BM326454 PIC1_57_C04.b1_A002 Pathogen-infecte... 174 1e-041
gb|AW924340.1|AW924340 WS1_52_C05.b1_A002 Water-stressed 1 ... 167 3e-039
gb|BE355050.1|BE355050 DG1_10_A02.b1_A002 Dark Grown 1 (DG1... 167 3e-039
gb|BE355030.1|BE355030 DG1_10_A02.g1_A002 Dark Grown 1 (DG1... 167 3e-039
gb|CD225552.1|CD225552 CCC1_40_B09.b1_A007 Callus culture/c... 167 3e-039
gb|CD225877.1|CD225877 CCC1_42_H01.b1_A007 Callus culture/c... 167 3e-039
gb|AW680375.1|AW680375 WS1_52_C05.g1_A002 Water-stressed 1 ... 163 5e-038
gb|BG048295.1|BG048295 OV1_16_D06.g1_A002 Ovary 1 (OV1) Sor... 163 5e-038
gb|CN134909.1|CN134909 OX1_29_G07.b1_A002 Oxidatively-stres... 161 2e-037
gb|CN150583.1|CN150583 WOUND1_70_D10.b1_A002 Wounded leaves... 161 2e-037
gb|CD223584.1|CD223584 CCC1_29_G04.b1_A007 Callus culture/c... 159 7e-037
gb|CN141541.1|CN141541 OX1_52_G05.b1_A002 Oxidatively-stres... 159 7e-037
gb|CN145286.1|CN145286 WOUND1_28_A05.b2_A002 Wounded leaves... 159 7e-037
gb|CW106335.1|CW106335 104_475_11013357_148_34460_081 Sorgh... 145 1e-032
gb|CF434049.1|CF434049 NIT1_31_E11.g1_A002 Nitrogen-deficie... 143 4e-032
gb|BM330840.1|BM330840 PIC1_57_C04.g1_A002 Pathogen-infecte... 111 2e-022
gb|CD226179.1|CD226179 CCC1_44_H01.b1_A007 Callus culture/c... 109 6e-022
gb|CW074592.1|CW074592 104_349_10804346_116_31382_170 Sorgh... 103 4e-020
gb|BG273312.1|BG273312 OV2_25_G11.g1_A002 Ovary 2 (OV2) Sor... 103 4e-020
gb|CL160960.1|CL160960 104_352_10805381_114_31826_053 Sorgh... 98 2e-018
gb|CL173652.1|CL173652 104_377_10891026_148_31792_162 Sorgh... 98 2e-018
gb|CL177482.1|CL177482 104_384_10893858_148_31915_306 Sorgh... 98 2e-018
gb|CW230864.1|CW230864 104_679_11210817_116_37331_033 Sorgh... 98 2e-018
gb|CW230865.1|CW230865 104_679_11210817_148_37335_033 Sorgh... 98 2e-018
gb|BF655616.1|BF655616 FM1_46_D09.b1_A003 Floral-Induced Me... 98 2e-018
gb|CF483093.1|CF483093 POL1_11_F02.b1_A002 Pollen Sorghum b... 96 9e-018
gb|CW148562.1|CW148562 104_547_11142021_116_35012_091 Sorgh... 92 1e-016
gb|CL173651.1|CL173651 104_377_10891026_116_31793_162 Sorgh... 90 6e-016
gb|CF769974.1|CF769974 DSBF1_5_A06.b1_A010 Drought-stressed... 90 6e-016
gb|CW468359.1|CW468359 fsbb001f220i02f0 Sorghum methylation... 86 9e-015
gb|AW285106.1|AW285106 LG1_300_F09.g1_A002 Light Grown 1 (L... 82 1e-013
gb|CF770886.1|CF770886 DSBF1_11_A12.g1_A010 Drought-stresse... 82 1e-013
gb|CD429325.1|CD429325 ETH1_3_C01.g1_A002 Ethylene-treated ... 76 8e-012
gb|AI724742.1|AI724742 RHIZ1_26_E07.y2_A001 Rhizome1 (RHIZ1... 62 1e-007
gb|BG558481.1|BG558481 RHIZ2_56_C04.g1_A003 Rhizome2 (RHIZ2... 60 5e-007
gb|BE597532.1|BE597532 PI1_70_G03.b1_A002 Pathogen induced ... 56 8e-006
gb|CN127676.1|CN127676 RHOH1_24_A03.g3_A002 Acid- and alkal... 48 0.002
gb|CL177481.1|CL177481 104_384_10893858_116_31916_306 Sorgh... 46 0.007
gb|CW197306.1|CW197306 104_621_11181615_116_36817_054 Sorgh... 46 0.007
gb|CW197307.1|CW197307 104_621_11181615_148_36818_054 Sorgh... 46 0.007
gb|CW305332.1|CW305332 104_790_11466258_148_37436_069 Sorgh... 46 0.007
gb|CL160961.1|CL160961 104_352_10805381_116_31827_053 Sorgh... 42 0.12
>gb|CN152418.1|CN152418 WOUND1_81_H09.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_81_H09_A002 5', mRNA sequence
Length = 804
Score = 973 bits (491), Expect = 0.0
Identities = 638/687 (92%)
Strand = Plus / Minus
Query: 404 gagcttcccaagatcgaacttgggggccttgagtatcttcaccttgcggatgaagacgtt 463
||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 804 gagcttcccgagatcaaacttgggagccttgagtatcttcaccttgcggatgaagacatt 745
Query: 464 ttgaagtgggaagatgctggaggtagacttctcaatctccttaccaataacttctggaat 523
||| |||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 744 ttggagtgagaagatgctggaggtggacttctcaatctctttaccaataacttctggaat 685
Query: 524 gaacttcgaaacaagttctttcaggtcacatgtagaagcctggttgatcataatctcaac 583
|||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 684 gaactttgaaacaagctctttcaggtcacatgtagaagcctggttggccataatctcaac 625
Query: 584 catcttacggcggatctgacggatctgggatgcctgagcatagcaggttctcttgacctg 643
|||||| ||||||||||| ||||||||||| ||||| ||||||||||||||||| |||||
Sbjct: 624 catcttgcggcggatctggcggatctgggaagcctgggcatagcaggttctcttcacctg 565
Query: 644 gtttgggcgcctcttggtgaagccgatgcagaacaaacgcaacatgtagttgtcggttgt 703
|||||| ||||||||||||||||| ||||||||||| |||| |||||||||||| |||||
Sbjct: 564 gtttggacgcctcttggtgaagccaatgcagaacaagcgcagcatgtagttgtcagttgt 505
Query: 704 cttgacatcaacatgggcttcgattaatgtctgccacttcttcactagggatctcagttt 763
|||||||||||||||||||| || | ||||||||||||||| || |||||||| |||||
Sbjct: 504 tttgacatcaacatgggcttcaatgagtgtctgccacttcttgaccagggatctgagttt 445
Query: 764 atcagtggtaaaattcataccccaaaagtttgtgagcacattcctgccctgcacatcttc 823
|||||| ||||| ||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 444 atcagtagtaaatgacattccccaaaagtttgtgagcacattcctgccttgcacatcttc 385
Query: 824 agcacggagcctgattttcctgtaagcttgatcctcgtcgccctgaagatcagctaggca 883
|||||| ||||||||||||| |||||| ||||||||||| ||||||||||||||||||||
Sbjct: 384 agcacgaagcctgattttccggtaagcctgatcctcgtcaccctgaagatcagctaggca 325
Query: 884 aacctcaaagactctgtgcttcagaccctcagaagcaatcctggtaccctgtgtcctgga 943
||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 324 aacctcaaagactctatgcttcagaccctcagatgcaatcctggtaccctgtgtcctgga 265
Query: 944 tacgagagtcttcccgatgttgcgcacactgaacaccgacggtgccttgatgtcatacca 1003
|||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 264 cacgagagtcttcccaatgttgcgcacactgaacaccgacggggccttgatgtcatacca 205
Query: 1004 atccttcttagagaaagggtcgacggtctttttcttgccacccttctttcccttggagat 1063
||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 204 atccttcttagagaaggggtcgacggtcttcttcttcccacccttctttcccttggagat 145
Query: 1064 cctcttgttctttccgacagccatggt 1090
|||||||||||| ||||| ||||||||
Sbjct: 144 cctcttgttcttgccgactgccatggt 118
>gb|CF487936.1|CF487936 POL1_46_G01.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_46_G01_A002 5', mRNA sequence
Length = 722
Score = 922 bits (465), Expect = 0.0
Identities = 600/645 (93%)
Strand = Plus / Minus
Query: 446 cttgcggatgaagacgttttgaagtgggaagatgctggaggtagacttctcaatctcctt 505
||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||| ||
Sbjct: 722 cttgcggatgaagacattttggagtgggaagatgctggaggtggacttctcaatctcttt 663
Query: 506 accaataacttctggaatgaacttcgaaacaagttctttcaggtcacatgtagaagcctg 565
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 662 accaataacttctggaatgaactttgaaacaagctctttcaggtcacatgtagaagcctg 603
Query: 566 gttgatcataatctcaaccatcttacggcggatctgacggatctgggatgcctgagcata 625
|||| |||||||||||||||||| ||||||||||| ||||||||||| ||||| |||||
Sbjct: 602 gttggccataatctcaaccatcttgcggcggatctggcggatctgggaagcctgggcata 543
Query: 626 gcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaacgcaa 685
|||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||||
Sbjct: 542 gcaggttctcttcacctggtttggacgcctcttggtgaagccaatgcagaacaagcgcag 483
Query: 686 catgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccacttctt 745
|||||||||||| ||||| |||||||||||||||||||| || | |||||||||||||||
Sbjct: 482 catgtagttgtcagttgttttgacatcaacatgggcttcaatgagtgtctgccacttctt 423
Query: 746 cactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagcacatt 805
|| |||||||| ||||||||||| ||||| ||| |||||||||||||||||||||||
Sbjct: 422 gaccagggatctgagtttatcagtagtaaatgacattccccaaaagtttgtgagcacatt 363
Query: 806 cctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcgtcgcc 865
|||||| ||||||||||||||||| ||||||||||||| |||||| ||||||||||| ||
Sbjct: 362 cctgccttgcacatcttcagcacgaagcctgattttccggtaagcctgatcctcgtcacc 303
Query: 866 ctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagcaatcct 925
||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 302 ctgaagatcagctaggcaaacctcaaagactctatgcttcagaccctcagatgcaatcct 243
Query: 926 ggtaccctgtgtcctggatacgagagtcttcccgatgttgcgcacactgaacaccgacgg 985
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 242 ggtaccctgtgtcctggacacgagagtcttcccaatgttgcgcacactgaacaccgacgg 183
Query: 986 tgccttgatgtcataccaatccttcttagagaaagggtcgacggtctttttcttgccacc 1045
|||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||
Sbjct: 182 ggccttgatgtcataccaatccttcttagagaaggggtcgacggtcttcttcttcccacc 123
Query: 1046 cttctttcccttggagatcctcttgttctttccgacagccatggt 1090
|||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 122 cttctttcccttggagatcctcttgttcttgccgactgccatggt 78
>gb|CN152333.1|CN152333 WOUND1_81_H09.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_81_H09_A002 3', mRNA sequence
Length = 766
Score = 902 bits (455), Expect = 0.0
Identities = 647/709 (91%), Gaps = 4/709 (0%)
Strand = Plus / Minus
Query: 201 aatcttagggccagatgaaaacacgtagccaagacaactctat-aagttcacgtcataag 259
||||||||||||||| | ||||| |||||||| |||| ||||| |||||||| |||||||
Sbjct: 709 aatcttagggccagaagcaaacaggtagccaatacaattctatgaagttcacatcataag 650
Query: 260 caacctcatgtccagactcgcctagatat---agaagtagcaaacaaactactcggcagc 316
|||||| |||||| | || |||||||| || ||||||||| |||||||||||||||
Sbjct: 649 caacctactgtccaaaatcttctagatattatagtagtagcaaataaactactcggcagc 590
Query: 317 agcaacctcctgcccagcctcatctccctcgacaggcctctcaagcttcacaccaacatc 376
|||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct: 589 agcaacctcctgcccagcctcatctccctcaacaggcctctcaagcttcacccccacatc 530
Query: 377 ctctttgtagtcgccatgaacctccatgagcttcccaagatcgaacttgggggccttgag 436
||| |||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 529 ctccttgtagtcaccatgaacctccatgagcttcccgagatcaaacttgggagccttgag 470
Query: 437 tatcttcaccttgcggatgaagacgttttgaagtgggaagatgctggaggtagacttctc 496
|||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 469 tatcttcaccttgcggatgaagacattttggagtgggaagatgctggaggtggacttctc 410
Query: 497 aatctccttaccaataacttctggaatgaacttcgaaacaagttctttcaggtcacatgt 556
|||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 409 aatctctttaccaataacttctggaatgaactttgaaacaagctctttcaggtcacatgt 350
Query: 557 agaagcctggttgatcataatctcaaccatcttacggcggatctgacggatctgggatgc 616
||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| ||
Sbjct: 349 agaagcctggttggccataatctcaaccatcttgcggcggatctggcggatctgggaagc 290
Query: 617 ctgagcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaa 676
||| ||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||
Sbjct: 289 ctgggcatagcaggttctcttcacctggtttggacgcctcttggtgaagccaatgcagaa 230
Query: 677 caaacgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctg 736
||| |||| |||||||||||| ||||| |||||||||||||||||||| || | ||||||
Sbjct: 229 caagcgcagcatgtagttgtcagttgttttgacatcaacatgggcttcaatgagtgtctg 170
Query: 737 ccacttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgt 796
||||||||| || |||||||| ||||||||||| ||||| ||| ||||||||||||||
Sbjct: 169 ccacttcttgaccagggatctgagtttatcagtagtaaatgacattccccaaaagtttgt 110
Query: 797 gagcacattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatc 856
||||||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||||
Sbjct: 109 gagcacattcctgccttgcacatcttcagcacgaagcctgattttccggtaagcctgatc 50
Query: 857 ctcgtcgccctgaagatcagctaggcaaacctcaaagactctgtgcttc 905
|||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 49 ctcgtcaccctgaagatcagctaggcaaacctcaaagactctatgcttc 1
>gb|CN126040.1|CN126040 RHOH1_14_G06.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_14_G06_A002 5', mRNA sequence
Length = 783
Score = 880 bits (444), Expect = 0.0
Identities = 642/707 (90%), Gaps = 2/707 (0%)
Strand = Plus / Minus
Query: 384 tagtcgccatgaacctccatgagcttcccaagatcgaacttgggggccttgagtatcttc 443
||||| |||||||||||||| ||||||||||| || |||| |||||||| || ||||||
Sbjct: 783 tagtcaccatgaacctccataagcttcccaaggtcaaactgtggggccttcaggatcttc 724
Query: 444 accttgcggatgaagacgttttgaagtgggaagatgctggaggtagacttctcaatctcc 503
|||||||||||||| || || ||||| ||||||||||||||||||| |||||||||||
Sbjct: 723 accttgcggatgaaaacattctgaagcgggaagatgctggaggtagctttctcaatctct 664
Query: 504 ttaccaataacttctggaatgaacttcgaaacaagttctttcaggtcacatgtagaagcc 563
|| ||||| |||||||| || ||||| ||||| || || || || ||||| | ||| |||
Sbjct: 663 ttgccaatcacttctggtataaactttgaaaccagctccttaagatcacaggaagaggcc 604
Query: 564 tggttgatcataatctcaaccatcttacggcggatctgacggatctgggatgcctgagca 623
||||| | |||||| || |||||||| ||||||||||| ||||||| |||||||||||||
Sbjct: 603 tggttcaccataatgtccaccatcttgcggcggatctgccggatctaggatgcctgagca 544
Query: 624 tagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaacgc 683
||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 543 tagcacgttctcttgacctggtttgggcgcctcttggtgaagccaatgcagaacaagcgc 484
Query: 684 aacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccacttc 743
| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 483 agcatgtagttgtcagttgtcttgacatcaacatgggcttcaattaatgtctgccacttc 424
Query: 744 ttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagcaca 803
|||||||||||||| |||||||| || |||||| |||| |||||||||||||||||||||
Sbjct: 423 ttcactagggatctgagtttatcggtagtaaaactcatgccccaaaagtttgtgagcaca 364
Query: 804 ttcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcgtcg 863
| |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 363 tccctgccttgcacatcttcagcacggagcctgattttcctgtaagcctgatcctcgtcg 304
Query: 864 ccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagcaatc 923
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ccttgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagcaatc 244
Query: 924 ctggtaccctgtgtcctggatacgagagtcttcccgatgttgcgcacactgaacaccgac 983
|||||||||||||||||||| || |||||| || ||||||||||| |||||||| ||
Sbjct: 243 ctggtaccctgtgtcctggacac--tagtcttgccaatgttgcgcacgctgaacacagat 186
Query: 984 ggtgccttgatgtcataccaatccttcttagagaaagggtcgacggtctttttcttgcca 1043
|| |||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||
Sbjct: 185 ggggccttgatgtcataccaatccttcttagagaaggggtcgacggtcttcttcttccca 126
Query: 1044 cccttctttcccttggagatcctcttgttctttccgacagccatggt 1090
|||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 125 cccttctttcccttcgagatcctcttgttctttccaacagccatggt 79
>gb|BG649163.1|BG649163 EM1_77_B11.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 726
Score = 878 bits (443), Expect = 0.0
Identities = 632/693 (91%), Gaps = 4/693 (0%)
Strand = Plus / Minus
Query: 201 aatcttagggccagatgaaaacacgtagccaagacaactctat-aagttcacgtcataag 259
||||||||||||||| | ||||| |||||||| |||| ||||| |||||||| |||||||
Sbjct: 693 aatcttagggccagaagcaaacaggtagccaatacaattctatgaagttcacatcataag 634
Query: 260 caacctcatgtccagactcgcctagatat---agaagtagcaaacaaactactcggcagc 316
|||||| |||||| | || |||||||| || ||||||||| |||||||||||||||
Sbjct: 633 caacctactgtccaaaatcttctagatattatagtagtagcaaataaactactcggcagc 574
Query: 317 agcaacctcctgcccagcctcatctccctcgacaggcctctcaagcttcacaccaacatc 376
|||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct: 573 agcaacctcctgcccagcctcatctccctcaacaggcctctcaagcttcacccccacatc 514
Query: 377 ctctttgtagtcgccatgaacctccatgagcttcccaagatcgaacttgggggccttgag 436
||| |||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 513 ctccttgtagtcaccatgaacctccatgagcttcccgagatcaaacttgggagccttgag 454
Query: 437 tatcttcaccttgcggatgaagacgttttgaagtgggaagatgctggaggtagacttctc 496
|||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 453 tatcttcaccttgcggatgaagacattttggagtgggaagatgctggaggtggacttctc 394
Query: 497 aatctccttaccaataacttctggaatgaacttcgaaacaagttctttcaggtcacatgt 556
|||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 393 aatctctttaccaataacttctggaatgaactttgaaacaagctctttcaggtcacatgt 334
Query: 557 agaagcctggttgatcataatctcaaccatcttacggcggatctgacggatctgggatgc 616
||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| ||
Sbjct: 333 agaagcctggttggccataatctcaaccatcttgcggcggatctggcggatctgggaagc 274
Query: 617 ctgagcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaa 676
||| ||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||
Sbjct: 273 ctgggcatagcaggttctcttcacctggtttggacgcctcttggtgaagccaatgcagaa 214
Query: 677 caaacgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctg 736
||| |||| |||||||||||| ||||| |||||||||||||||||||| || | ||||||
Sbjct: 213 caagcgcagcatgtagttgtcagttgttttgacatcaacatgggcttcaatgagtgtctg 154
Query: 737 ccacttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgt 796
||||||||| || |||||||| ||||||||||| ||||| ||| ||||||||||||||
Sbjct: 153 ccacttcttgaccagggatctgagtttatcagtagtaaatgacattccccaaaagtttgt 94
Query: 797 gagcacattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatc 856
||||||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||||
Sbjct: 93 gagcacattcctgccttgcacatcttcagcacgaagcctgattttccggtaagcctgatc 34
Query: 857 ctcgtcgccctgaagatcagctaggcaaacctc 889
|||||| ||||||||||||||||||||||||||
Sbjct: 33 ctcgtcaccctgaagatcagctaggcaaacctc 1
>gb|CF487849.1|CF487849 POL1_46_G01.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_46_G01_A002 3', mRNA sequence
Length = 707
Score = 817 bits (412), Expect = 0.0
Identities = 601/662 (90%), Gaps = 4/662 (0%)
Strand = Plus / Minus
Query: 201 aatcttagggccagatgaaaacacgtagccaagacaactctat-aagttcacgtcataag 259
||||||||||||||| | ||||| |||||||| |||| ||||| |||||||| |||||||
Sbjct: 662 aatcttagggccagaagcaaacaggtagccaatacaattctatgaagttcacatcataag 603
Query: 260 caacctcatgtccagactcgcctagatat---agaagtagcaaacaaactactcggcagc 316
|||||| |||||| | || |||||||| || ||||||||| |||||||||||||||
Sbjct: 602 caacctactgtccaaaatcttctagatattatagtagtagcaaataaactactcggcagc 543
Query: 317 agcaacctcctgcccagcctcatctccctcgacaggcctctcaagcttcacaccaacatc 376
|||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct: 542 agcaacctcctgcccagcctcatctccctcaacaggcctctcaagcttcacccccacatc 483
Query: 377 ctctttgtagtcgccatgaacctccatgagcttcccaagatcgaacttgggggccttgag 436
||| |||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 482 ctccttgtagtcaccatgaacctccatgagcttcccgagatcaaacttgggagccttgag 423
Query: 437 tatcttcaccttgcggatgaagacgttttgaagtgggaagatgctggaggtagacttctc 496
|||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 422 tatcttcaccttgcggatgaagacattttggagtgggaagatgctggaggtggacttctc 363
Query: 497 aatctccttaccaataacttctggaatgaacttcgaaacaagttctttcaggtcacatgt 556
|||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 362 aatctctttaccaataacttctggaatgaactttgaaacaagctctttcaggtcacatgt 303
Query: 557 agaagcctggttgatcataatctcaaccatcttacggcggatctgacggatctgggatgc 616
||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| ||
Sbjct: 302 agaagcctggttggccataatctcaaccatcttgcggcggatctggcggatctgggaagc 243
Query: 617 ctgagcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaa 676
||| ||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||
Sbjct: 242 ctgggcatagcaggttctcttcacctggtttggacgcctcttggtgaagccaatgcagaa 183
Query: 677 caaacgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctg 736
||| |||| |||||||||||| ||||| |||||||||||||||||||| || | || |||
Sbjct: 182 caagcgcagcatgtagttgtcagttgttttgacatcaacatgggcttcaatgagtggctg 123
Query: 737 ccacttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgt 796
||||||||| || |||||||| ||||||||||| ||||| ||| ||||||||||||||
Sbjct: 122 ccacttcttgaccagggatctgagtttatcagtagtaaatgacattccccaaaagtttgt 63
Query: 797 gagcacattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatc 856
||||||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||||
Sbjct: 62 gagcacattcctgccttgcacatcttcagcacgaagcctgattttccggtaagcctgatc 3
Query: 857 ct 858
||
Sbjct: 2 ct 1
>gb|BG933591.1|BG933591 OV1_32_B11.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 669
Score = 811 bits (409), Expect = 0.0
Identities = 589/647 (91%), Gaps = 4/647 (0%)
Strand = Plus / Minus
Query: 201 aatcttagggccagatgaaaacacgtagccaagacaactctat-aagttcacgtcataag 259
||||||||||||||| | ||||| |||||||| |||| ||||| |||||||| |||||||
Sbjct: 649 aatcttagggccagaagcaaacaggtagccaatacaattctatgaagttcacatcataag 590
Query: 260 caacctcatgtccagactcgcctagatat---agaagtagcaaacaaactactcggcagc 316
|||||| |||||| | || |||||||| || ||||||||| |||||||||||||||
Sbjct: 589 caacctactgtccaaaatcttctagatattatagtagtagcaaataaactactcggcagc 530
Query: 317 agcaacctcctgcccagcctcatctccctcgacaggcctctcaagcttcacaccaacatc 376
|||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct: 529 agcaacctcctgcccagcctcatctccctcaacaggcctctcaagcttcacccccacatc 470
Query: 377 ctctttgtagtcgccatgaacctccatgagcttcccaagatcgaacttgggggccttgag 436
||| |||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 469 ctccttgtagtcaccatgaacctccatgagcttcccgagatcaaacttgggagccttgag 410
Query: 437 tatcttcaccttgcggatgaagacgttttgaagtgggaagatgctggaggtagacttctc 496
|||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 409 tatcttcaccttgcggatgaagacattttggagtgggaagatgctggaggtggacttctc 350
Query: 497 aatctccttaccaataacttctggaatgaacttcgaaacaagttctttcaggtcacatgt 556
|||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 349 aatctctttaccaataacttctggaatgaactttgaaacaagctctttcaggtcacatgt 290
Query: 557 agaagcctggttgatcataatctcaaccatcttacggcggatctgacggatctgggatgc 616
||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| ||
Sbjct: 289 agaagcctggttggccataatctcaaccatcttgcggcggatctggcggatctgggaagc 230
Query: 617 ctgagcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaa 676
||| ||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||
Sbjct: 229 ctgggcatagcaggttctcttcacctggtttggacgcctcttggtgaagccaatgcagaa 170
Query: 677 caaacgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctg 736
||| |||| |||||||||||| ||||| |||||||||||||||||||| || | ||||||
Sbjct: 169 caagcgcagcatgtagttgtcagttgttttgacatcaacatgggcttcaatgagtgtctg 110
Query: 737 ccacttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgt 796
||||||||| || |||||||| ||||||||||| ||||| ||| ||||||||||||||
Sbjct: 109 ccacttcttgaccagggatctgagtttatcagtagtaaatgacattccccaaaagtttgt 50
Query: 797 gagcacattcctgccctgcacatcttcagcacggagcctgattttcc 843
||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 49 gagcacattcctgccttgcacatcttcagcacgaagcctgattttcc 3
>gb|BG103114.1|BG103114 RHIZ2_18_C12.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 662
Score = 791 bits (399), Expect = 0.0
Identities = 576/633 (90%), Gaps = 4/633 (0%)
Strand = Plus / Minus
Query: 201 aatcttagggccagatgaaaacacgtagccaagacaactctat-aagttcacgtcataag 259
||||||||||||||| | ||||| |||||||| |||| ||||| |||||||| |||||||
Sbjct: 633 aatcttagggccagaagcaaacaggtagccaatacaattctatgaagttcacatcataag 574
Query: 260 caacctcatgtccagactcgcctagatat---agaagtagcaaacaaactactcggcagc 316
|||||| |||||| | || |||||||| || ||||||||| |||||||||||||||
Sbjct: 573 caacctactgtccaaaatcttctagatattatagtagtagcaaataaactactcggcagc 514
Query: 317 agcaacctcctgcccagcctcatctccctcgacaggcctctcaagcttcacaccaacatc 376
|||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||
Sbjct: 513 agcaacctcctgcccagcctcatctccctcaacaggcctctcgagcttcacacccacatc 454
Query: 377 ctctttgtagtcgccatgaacctccatgagcttcccaagatcgaacttgggggccttgag 436
||| |||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 453 ctccttgtagtcaccatgaacctccatgagcttcccgagatcaaacttgggagccttgag 394
Query: 437 tatcttcaccttgcggatgaagacgttttgaagtgggaagatgctggaggtagacttctc 496
|||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 393 tatcttcaccttgcggatgaagacattttggagtgggaagatgctggaggtggacttctc 334
Query: 497 aatctccttaccaataacttctggaatgaacttcgaaacaagttctttcaggtcacatgt 556
|||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 333 aatctctttaccaataacttctggaatgaactttgaaacaagctctttcaggtcacatgt 274
Query: 557 agaagcctggttgatcataatctcaaccatcttacggcggatctgacggatctgggatgc 616
||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| ||
Sbjct: 273 agaagcctggttggccataatctcaaccatcttgcggcggatctggcggatctgggaagc 214
Query: 617 ctgagcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaa 676
||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||
Sbjct: 213 ctgagcatagcaggttctcttcacctggtttggacgcctcttggtgaagccaatgcagaa 154
Query: 677 caaacgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctg 736
||| |||| |||||||||||| ||||| |||||||||||||||||||| || | ||||||
Sbjct: 153 caagcgcagcatgtagttgtcagttgttttgacatcaacatgggcttcaatgagtgtctg 94
Query: 737 ccacttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgt 796
||||||||| || |||||||| ||||||||||| ||||| ||| ||||||||| ||||
Sbjct: 93 ccacttcttgaccagggatctgagtttatcagtagtaaatgacattccccaaaaggttgt 34
Query: 797 gagcacattcctgccctgcacatcttcagcacg 829
||||||||||||||| |||||||||||||||||
Sbjct: 33 gagcacattcctgccttgcacatcttcagcacg 1
>gb|AW678569.1|AW678569 WS1_16_H06.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 675
Score = 785 bits (396), Expect = 0.0
Identities = 573/630 (90%), Gaps = 4/630 (0%)
Strand = Plus / Minus
Query: 201 aatcttagggccagatgaaaacacgtagccaagacaactctat-aagttcacgtcataag 259
||||||||||||||| | ||||| |||||||| |||| ||||| |||||||| |||||||
Sbjct: 630 aatcttagggccagaagcaaacaggtagccaatacaattctatgaagttcacatcataag 571
Query: 260 caacctcatgtccagactcgcctagatat---agaagtagcaaacaaactactcggcagc 316
|||||| |||||| | || |||||||| || ||||||||| |||||||||||||||
Sbjct: 570 caacctactgtccaaaatcttctagatattatagtagtagcaaataaactactcggcagc 511
Query: 317 agcaacctcctgcccagcctcatctccctcgacaggcctctcaagcttcacaccaacatc 376
|||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct: 510 agcaacctcctgcccagcctcatctccctcaacaggcctctcaagcttcacccccacatc 451
Query: 377 ctctttgtagtcgccatgaacctccatgagcttcccaagatcgaacttgggggccttgag 436
||| |||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 450 ctccttgtagtcaccatgaacctccatgagcttcccgagatcaaacttgggagccttgag 391
Query: 437 tatcttcaccttgcggatgaagacgttttgaagtgggaagatgctggaggtagacttctc 496
|||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 390 tatcttcaccttgcggatgaagacattttggagtgggaagatgctggaggtggacttctc 331
Query: 497 aatctccttaccaataacttctggaatgaacttcgaaacaagttctttcaggtcacatgt 556
|||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 330 aatctctttaccaataacttctggaatgaactttgaaacaagctctttcaggtcacatgt 271
Query: 557 agaagcctggttgatcataatctcaaccatcttacggcggatctgacggatctgggatgc 616
||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| ||
Sbjct: 270 agaagcctggttggccataatctcaaccatcttgcggcggatctggcggatctgggaagc 211
Query: 617 ctgagcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaa 676
||| ||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||
Sbjct: 210 ctgggcatagcaggttctcttcacctggtttggacgcctcttggtgaagccaatgcagaa 151
Query: 677 caaacgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctg 736
||| |||| |||||||||||| ||||| |||||||||||||||||||| || | ||||||
Sbjct: 150 caagcgcagcatgtagttgtcagttgttttgacatcaacatgggcttcaatgagtgtctg 91
Query: 737 ccacttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgt 796
||||||||| || |||||||| ||||||||||| ||||| ||| ||||||||||||||
Sbjct: 90 ccacttcttgaccagggatctgagtttatcagtagtaaatgacattccccaaaagtttgt 31
Query: 797 gagcacattcctgccctgcacatcttcagc 826
||||||||||||||| ||||||||||||||
Sbjct: 30 gagcacattcctgccttgcacatcttcagc 1
>gb|CD429217.1|CD429217 ETH1_3_E01.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_3_E01_A002 3', mRNA sequence
Length = 651
Score = 724 bits (365), Expect = 0.0
Identities = 527/579 (91%), Gaps = 4/579 (0%)
Strand = Plus / Minus
Query: 201 aatcttagggccagatgaaaacacgtagccaagacaactctat-aagttcacgtcataag 259
||||||||||||||| | ||||| |||||||| |||| ||||| |||||||| |||||||
Sbjct: 587 aatcttagggccagaagcaaacaggtagccaatacaattctatgaagttcacatcataag 528
Query: 260 caacctcatgtccagactcgcctagatat---agaagtagcaaacaaactactcggcagc 316
|||||| |||||| | || |||||||| || ||||||||| |||||||||||||||
Sbjct: 527 caacctactgtccaaaatcttctagatattatagtagtagcaaataaactactcggcagc 468
Query: 317 agcaacctcctgcccagcctcatctccctcgacaggcctctcaagcttcacaccaacatc 376
|||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct: 467 agcaacctcctgcccagcctcatctccctcaacaggcctctcaagcttcacccccacatc 408
Query: 377 ctctttgtagtcgccatgaacctccatgagcttcccaagatcgaacttgggggccttgag 436
||| |||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 407 ctccttgtagtcaccatgaacctccatgagcttcccgagatcaaacttgggagccttgag 348
Query: 437 tatcttcaccttgcggatgaagacgttttgaagtgggaagatgctggaggtagacttctc 496
|||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 347 tatcttcaccttgcggatgaagacattttggagtgggaagatgctggaggtggacttctc 288
Query: 497 aatctccttaccaataacttctggaatgaacttcgaaacaagttctttcaggtcacatgt 556
|||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 287 aatctctttaccaataacttctggaatgaactttgaaacaagctctttcaggtcacatgt 228
Query: 557 agaagcctggttgatcataatctcaaccatcttacggcggatctgacggatctgggatgc 616
||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| ||
Sbjct: 227 agaagcctggttggccataatctcaaccatcttgcggcggatctggcggatctgggaagc 168
Query: 617 ctgagcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaa 676
||| ||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||
Sbjct: 167 ctgggcatagcaggttctcttcacctggtttggacgcctcttggtgaagccaatgcagaa 108
Query: 677 caaacgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctg 736
||| |||| |||||||||||| ||||| |||||||||||||||||||| || | ||||||
Sbjct: 107 caagcgcagcatgtagttgtcagttgttttgacatcaacatgggcttcaatgagtgtctg 48
Query: 737 ccacttcttcactagggatctcagtttatcagtggtaaa 775
||||||||| || |||||||| ||||||||||| |||||
Sbjct: 47 ccacttcttgaccagggatctgagtttatcagtagtaaa 9
>gb|BM329969.1|BM329969 PIC1_45_E10.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 617
Score = 716 bits (361), Expect = 0.0
Identities = 520/571 (91%), Gaps = 4/571 (0%)
Strand = Plus / Minus
Query: 201 aatcttagggccagatgaaaacacgtagccaagacaactctat-aagttcacgtcataag 259
||||||||||||||| | ||||| |||||||| |||| ||||| |||||||| |||||||
Sbjct: 571 aatcttagggccagaagcaaacaggtagccaatacaattctatgaagttcacatcataag 512
Query: 260 caacctcatgtccagactcgcctagatat---agaagtagcaaacaaactactcggcagc 316
|||||| |||||| | || |||||||| || ||||||||| |||||||||||||||
Sbjct: 511 caacctactgtccaaaatcttctagatattatagtagtagcaaataaactactcggcagc 452
Query: 317 agcaacctcctgcccagcctcatctccctcgacaggcctctcaagcttcacaccaacatc 376
|||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct: 451 agcaacctcctgcccagcctcatctccctcaacaggcctctcaagcttcacccccacatc 392
Query: 377 ctctttgtagtcgccatgaacctccatgagcttcccaagatcgaacttgggggccttgag 436
||| |||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 391 ctccttgtagtcaccatgaacctccatgagcttcccgagatcaaacttgggagccttgag 332
Query: 437 tatcttcaccttgcggatgaagacgttttgaagtgggaagatgctggaggtagacttctc 496
|||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 331 tatcttcaccttgcggatgaagacattttggagtgggaagatgctggaggtggacttctc 272
Query: 497 aatctccttaccaataacttctggaatgaacttcgaaacaagttctttcaggtcacatgt 556
|||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 271 aatctctttaccaataacttctggaatgaactttgaaacaagctctttcaggtcacatgt 212
Query: 557 agaagcctggttgatcataatctcaaccatcttacggcggatctgacggatctgggatgc 616
||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| ||
Sbjct: 211 agaagcctggttggccataatctcaaccatcttgcggcggatctggcggatctgggaagc 152
Query: 617 ctgagcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaa 676
||| ||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||
Sbjct: 151 ctgggcatagcaggttctcttcacctggtttggacgcctcttggtgaagccaatgcagaa 92
Query: 677 caaacgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctg 736
||| |||| |||||||||||| ||||| |||||||||||||||||||| || | ||||||
Sbjct: 91 caagcgcagcatgtagttgtcagttgttttgacatcaacatgggcttcaatgagtgtctg 32
Query: 737 ccacttcttcactagggatctcagtttatca 767
||||||||| || |||||||| |||||||||
Sbjct: 31 ccacttcttgaccagggatctgagtttatca 1
>gb|BE918513.1|BE918513 OV1_4_G09.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 580
Score = 704 bits (355), Expect = 0.0
Identities = 511/561 (91%), Gaps = 4/561 (0%)
Strand = Plus / Minus
Query: 219 aaacacgtagccaagacaactctat-aagttcacgtcataagcaacctcatgtccagact 277
||||| |||||||| |||| ||||| |||||||| ||||||||||||| |||||| | |
Sbjct: 572 aaacaggtagccaatacaattctatgaagttcacatcataagcaacctactgtccaaaat 513
Query: 278 cgcctagatat---agaagtagcaaacaaactactcggcagcagcaacctcctgcccagc 334
| |||||||| || ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 512 cttctagatattatagtagtagcaaataaactactcggcagcagcaacctcctgcccagc 453
Query: 335 ctcatctccctcgacaggcctctcaagcttcacaccaacatcctctttgtagtcgccatg 394
|||||||||||| |||||||||||||||||||| || |||||||| |||||||| |||||
Sbjct: 452 ctcatctccctcaacaggcctctcaagcttcacccccacatcctccttgtagtcaccatg 393
Query: 395 aacctccatgagcttcccaagatcgaacttgggggccttgagtatcttcaccttgcggat 454
|||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 392 aacctccatgagcttcccgagatcaaacttgggagccttgagtatcttcaccttgcggat 333
Query: 455 gaagacgttttgaagtgggaagatgctggaggtagacttctcaatctccttaccaataac 514
|||||| ||||| |||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 332 gaagacattttggagtgggaagatgctggaggtggacttctcaatctctttaccaataac 273
Query: 515 ttctggaatgaacttcgaaacaagttctttcaggtcacatgtagaagcctggttgatcat 574
||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 272 ttctggaatgaactttgaaacaagctctttcaggtcacatgtagaagcctggttggccat 213
Query: 575 aatctcaaccatcttacggcggatctgacggatctgggatgcctgagcatagcaggttct 634
||||||||||||||| ||||||||||| ||||||||||| ||||| ||||||||||||||
Sbjct: 212 aatctcaaccatcttgcggcggatctggcggatctgggaagcctgggcatagcaggttct 153
Query: 635 cttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaacgcaacatgtagtt 694
||| ||||||||||| ||||||||||||||||| ||||||||||| |||| |||||||||
Sbjct: 152 cttcacctggtttggacgcctcttggtgaagccaatgcagaacaagcgcagcatgtagtt 93
Query: 695 gtcggttgtcttgacatcaacatgggcttcgattaatgtctgccacttcttcactaggga 754
||| ||||| |||||||||||||||||||| || | ||||||||||||||| || |||||
Sbjct: 92 gtcagttgttttgacatcaacatgggcttcaatgagtgtctgccacttcttgaccaggga 33
Query: 755 tctcagtttatcagtggtaaa 775
||| ||||||||||| |||||
Sbjct: 32 tctgagtttatcagtagtaaa 12
>gb|BG103298.1|BG103298 RHIZ2_18_C12.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 529
Score = 698 bits (352), Expect = 0.0
Identities = 445/476 (93%)
Strand = Plus / Minus
Query: 615 gcctgagcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcag 674
||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||
Sbjct: 528 gcctgagcatagcaggttctcttcacctggtttggacgcctcttggtgaagccaatgcag 469
Query: 675 aacaaacgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtc 734
||||| |||| |||||||||||| ||||| |||||||||||||||||||| || | ||||
Sbjct: 468 aacaagcgcagcatgtagttgtcagttgttttgacatcaacatgggcttcaatgagtgtc 409
Query: 735 tgccacttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagttt 794
||||||||||| || |||||||| ||||||||||| ||||| ||| ||||||||||||
Sbjct: 408 tgccacttcttgaccagggatctgagtttatcagtagtaaatgacattccccaaaagttt 349
Query: 795 gtgagcacattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttga 854
||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 348 gtgagcacattcctgccttgcacatcttcagcacggagcctgattttccggtaagcctga 289
Query: 855 tcctcgtcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctca 914
|||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 288 tcctcgtcaccctgaagatcagctaggcaaacctcaaagactctatgcttcagaccctca 229
Query: 915 gaagcaatcctggtaccctgtgtcctggatacgagagtcttcccgatgttgcgcacactg 974
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 228 gaagcaatcctggtaccctgtgtcctggacacgagagtcttcccaatgttgcgcacactg 169
Query: 975 aacaccgacggtgccttgatgtcataccaatccttcttagagaaagggtcgacggtcttt 1034
||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 168 aacaccgacggggccttgatgtcataccaatccttcttagagaaggggtcgacggtcttc 109
Query: 1035 ttcttgccacccttctttcccttggagatcctcttgttctttccgacagccatggt 1090
||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 108 ttcttcccacccttctttcccttggagatcctcttgttcttgccgactgccatggt 53
>gb|BG052778.1|BG052778 RHIZ2_14_G07.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 575
Score = 696 bits (351), Expect = 0.0
Identities = 498/545 (91%), Gaps = 4/545 (0%)
Strand = Plus / Minus
Query: 201 aatcttagggccagatgaaaacacgtagccaagacaactctat-aagttcacgtcataag 259
||||||||||||||| | ||||| |||||||| |||| ||||| |||||||| |||||||
Sbjct: 545 aatcttagggccagaagcaaacaggtagccaatacaattctatgaagttcacatcataag 486
Query: 260 caacctcatgtccagactcgcctagatat---agaagtagcaaacaaactactcggcagc 316
|||||| |||||| | || |||||||| || ||||||||| |||||||||||||||
Sbjct: 485 caacctactgtccaaaatcttctagatattatagtagtagcaaataaactactcggcagc 426
Query: 317 agcaacctcctgcccagcctcatctccctcgacaggcctctcaagcttcacaccaacatc 376
|||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||
Sbjct: 425 agcaacctcctgcccagcctcatctccctcaacaggcctctcgagcttcacacccacatc 366
Query: 377 ctctttgtagtcgccatgaacctccatgagcttcccaagatcgaacttgggggccttgag 436
||| |||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 365 ctccttgtagtcaccatgaacctccatgagcttcccgagatcaaacttgggagccttgag 306
Query: 437 tatcttcaccttgcggatgaagacgttttgaagtgggaagatgctggaggtagacttctc 496
|||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 305 tatcttcaccttgcggatgaagacattttggagtgggaagatgctggaggtggacttctc 246
Query: 497 aatctccttaccaataacttctggaatgaacttcgaaacaagttctttcaggtcacatgt 556
|||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 245 aatctctttaccaataacttctggaatgaactttgaaacaagctctttcaggtcacatgt 186
Query: 557 agaagcctggttgatcataatctcaaccatcttacggcggatctgacggatctgggatgc 616
||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| ||
Sbjct: 185 agaagcctggttggccataatctcaaccatcttgcggcggatctggcggatctgggaagc 126
Query: 617 ctgagcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaa 676
||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||
Sbjct: 125 ctgagcatagcaggttctcttcacctggtttggacgcctcttggtgaagccaatgcagaa 66
Query: 677 caaacgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctg 736
||| |||| |||||||||||| ||||| |||||||||||||||||||| || | ||||||
Sbjct: 65 caagcgcagcatgtagttgtcagttgttttgacatcaacatgggcttcaatgagtgtctg 6
Query: 737 ccact 741
|||||
Sbjct: 5 ccact 1
>gb|BE918770.1|BE918770 OV1_4_G09.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 530
Score = 690 bits (348), Expect = 0.0
Identities = 453/488 (92%)
Strand = Plus / Minus
Query: 603 cggatctgggatgcctgagcatagcaggttctcttgacctggtttgggcgcctcttggtg 662
||||||||||| ||||| ||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 530 cggatctgggaagcctgggcatagcaggttctcttcacctggtttggacgcctcttggtg 471
Query: 663 aagccgatgcagaacaaacgcaacatgtagttgtcggttgtcttgacatcaacatgggct 722
||||| ||||||||||| |||| |||||||||||| ||||| ||||||||||||||||||
Sbjct: 470 aagccaatgcagaacaagcgcagcatgtagttgtcagttgttttgacatcaacatgggct 411
Query: 723 tcgattaatgtctgccacttcttcactagggatctcagtttatcagtggtaaaattcata 782
|| || | ||||||||||||||| || |||||||| ||||||||||| ||||| |||
Sbjct: 410 tcaatgagtgtctgccacttcttgaccagggatctgagtttatcagtagtaaatgacatt 351
Query: 783 ccccaaaagtttgtgagcacattcctgccctgcacatcttcagcacggagcctgattttc 842
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 350 ccccaaaagtttgtgagcacattcctgccttgcacatcttcagcacgaagcctgattttc 291
Query: 843 ctgtaagcttgatcctcgtcgccctgaagatcagctaggcaaacctcaaagactctgtgc 902
| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 290 cggtaagcctgatcctcgtcaccctgaagatcagctaggcaaacctcaaagactctatgc 231
Query: 903 ttcagaccctcagaagcaatcctggtaccctgtgtcctggatacgagagtcttcccgatg 962
|||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 230 ttcagaccctcagatgcaatcctggtaccctgtgtcctggacacgagagtcttcccaatg 171
Query: 963 ttgcgcacactgaacaccgacggtgccttgatgtcataccaatccttcttagagaaaggg 1022
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 170 ttgcgcacactgaacaccgacggggccttgatgtcataccaatccttcttagagaagggg 111
Query: 1023 tcgacggtctttttcttgccacccttctttcccttggagatcctcttgttctttccgaca 1082
||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 110 tcgacggtcttcttcttcccacccttctttcccttggagatcctcttgttcttgccgact 51
Query: 1083 gccatggt 1090
||||||||
Sbjct: 50 gccatggt 43
>gb|BG240609.1|BG240609 OV1_32_B11.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 552
Score = 682 bits (344), Expect = 0.0
Identities = 449/484 (92%)
Strand = Plus / Minus
Query: 607 tctgggatgcctgagcatagcaggttctcttgacctggtttgggcgcctcttggtgaagc 666
||||||| ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 552 tctgggaagcctgggcatagcaggttctcttcacctggtttggacgcctcttggtgaagc 493
Query: 667 cgatgcagaacaaacgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcga 726
| ||||||||||| |||| |||||||||||| ||||| |||||||||||||||||||| |
Sbjct: 492 caatgcagaacaagcgcagcatgtagttgtcagttgttttgacatcaacatgggcttcaa 433
Query: 727 ttaatgtctgccacttcttcactagggatctcagtttatcagtggtaaaattcatacccc 786
| | ||||||||||||||| || |||||||| ||||||||||| ||||| ||| ||||
Sbjct: 432 tgagtgtctgccacttcttgaccagggatctgagtttatcagtagtaaatgacattcccc 373
Query: 787 aaaagtttgtgagcacattcctgccctgcacatcttcagcacggagcctgattttcctgt 846
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||
Sbjct: 372 aaaagtttgtgagcacattcctgccttgcacatcttcagcacgaagcctgattttccggt 313
Query: 847 aagcttgatcctcgtcgccctgaagatcagctaggcaaacctcaaagactctgtgcttca 906
|||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 312 aagcctgatcctcgtcaccctgaagatcagctaggcaaacctcaaagactctatgcttca 253
Query: 907 gaccctcagaagcaatcctggtaccctgtgtcctggatacgagagtcttcccgatgttgc 966
|||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 252 gaccctcagatgcaatcctggtaccctgtgtcctggacacgagagtcttcccaatgttgc 193
Query: 967 gcacactgaacaccgacggtgccttgatgtcataccaatccttcttagagaaagggtcga 1026
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 192 gcacactgaacaccgacggggccttgatgtcataccaatccttcttagagaaggggtcga 133
Query: 1027 cggtctttttcttgccacccttctttcccttggagatcctcttgttctttccgacagcca 1086
||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 132 cggtcttcttcttcccacccttctttcccttggagatcctcttgttcttgccgactgcca 73
Query: 1087 tggt 1090
||||
Sbjct: 72 tggt 69
>gb|BE366520.1|BE366520 PI1_34_B09.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 580
Score = 670 bits (338), Expect = 0.0
Identities = 482/528 (91%), Gaps = 4/528 (0%)
Strand = Plus / Minus
Query: 201 aatcttagggccagatgaaaacacgtagccaagacaactctat-aagttcacgtcataag 259
||||||||||||||| | ||||| |||||||| |||| ||||| |||||||| |||||||
Sbjct: 532 aatcttagggccagaagcaaacaggtagccaatacaattctatgaagttcacatcataag 473
Query: 260 caacctcatgtccagactcgcctagatat---agaagtagcaaacaaactactcggcagc 316
|||||| |||||| | || |||||||| || ||||||||| |||||||||||||||
Sbjct: 472 caacctactgtccaaaatcttctagatattatagtagtagcaaataaactactcggcagc 413
Query: 317 agcaacctcctgcccagcctcatctccctcgacaggcctctcaagcttcacaccaacatc 376
|||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct: 412 agcaacctcctgcccagcctcatctccctcaacaggcctctcaagcttcacccccacatc 353
Query: 377 ctctttgtagtcgccatgaacctccatgagcttcccaagatcgaacttgggggccttgag 436
||| |||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 352 ctccttgtagtcaccatgaacctccatgagcttcccgagatcaaacttgggagccttgag 293
Query: 437 tatcttcaccttgcggatgaagacgttttgaagtgggaagatgctggaggtagacttctc 496
|||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 292 tatcttcaccttgcggatgaagacattttggagtgggaagatgctggaggtggacttctc 233
Query: 497 aatctccttaccaataacttctggaatgaacttcgaaacaagttctttcaggtcacatgt 556
|||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 232 aatctctttaccaataacttctggaatgaactttgaaacaagctctttcaggtcacatgt 173
Query: 557 agaagcctggttgatcataatctcaaccatcttacggcggatctgacggatctgggatgc 616
||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| ||
Sbjct: 172 agaagcctggttggccataatctcaaccatcttgcggcggatctggcggatctgggaagc 113
Query: 617 ctgagcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaa 676
||| ||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||
Sbjct: 112 ctgggcatagcaggttctcttcacctggtttggacgcctcttggtgaagccaatgcagaa 53
Query: 677 caaacgcaacatgtagttgtcggttgtcttgacatcaacatgggcttc 724
||| |||| |||||||| ||| ||||| ||||||||||||||||||||
Sbjct: 52 caagcgcagcatgtagtagtcagttgttttgacatcaacatgggcttc 5
>gb|CF428517.1|CF428517 PH1_15_D09.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_15_D09_A002 5', mRNA sequence
Length = 596
Score = 670 bits (338), Expect = 0.0
Identities = 437/470 (92%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 595 gcatagcaggttctcttcacctggtttggacgcctcttggtgaagccaatgcagaacaag 536
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
|||| |||||||||||| ||||| |||||||||||||||||||| || | ||||||||||
Sbjct: 535 cgcagcatgtagttgtcagttgttttgacatcaacatgggcttcaatgagtgtctgccac 476
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
||||| || |||||||| ||||||||||| ||||| ||| ||||||||||||||||||
Sbjct: 475 ttcttgaccagggatctgagtttatcagtagtaaatgacattccccaaaagtttgtgagc 416
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||||||||
Sbjct: 415 acattcctgccttgcacatcttcagcacgaagcctgattttccggtaagcctgatcctcg 356
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 355 tcaccctgaagatcagctaggcaaacctcaaagactctatgcttcagaccctcagatgca 296
Query: 921 atcctggtaccctgtgtcctggatacgagagtcttcccgatgttgcgcacactgaacacc 980
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 295 atcctggtaccctgtgtcctggacacgagagtcttcccaatgttgcgcacactgaacacc 236
Query: 981 gacggtgccttgatgtcataccaatccttcttagagaaagggtcgacggtctttttcttg 1040
||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 235 gacggggccttgatgtcataccaatccttcttagagaaggggtcgacggtcttcttcttc 176
Query: 1041 ccacccttctttcccttggagatcctcttgttctttccgacagccatggt 1090
||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 175 ccacccttctttcccttggagatcctcttgttcttgccgactgccatggt 126
>gb|CN125950.1|CN125950 RHOH1_14_G06.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_14_G06_A002 3', mRNA sequence
Length = 811
Score = 648 bits (327), Expect = 0.0
Identities = 486/539 (90%)
Strand = Plus / Minus
Query: 318 gcaacctcctgcccagcctcatctccctcgacaggcctctcaagcttcacaccaacatcc 377
||||||||||| ||||||||||||||||| || ||||||||||||||||| |||||||||
Sbjct: 539 gcaacctcctgtccagcctcatctccctcaacgggcctctcaagcttcacgccaacatcc 480
Query: 378 tctttgtagtcgccatgaacctccatgagcttcccaagatcgaacttgggggccttgagt 437
||||| ||||| |||||||||||||| ||||||||||| || ||||| |||||||| ||
Sbjct: 479 tctttatagtcaccatgaacctccataagcttcccaaggtcaaactttggggccttcagg 420
Query: 438 atcttcaccttgcggatgaagacgttttgaagtgggaagatgctggaggtagacttctca 497
|||||||||||||||||||| || || ||||| ||||||||||||||||||| ||||||
Sbjct: 419 atcttcaccttgcggatgaaaacattctgaagcgggaagatgctggaggtagctttctca 360
Query: 498 atctccttaccaataacttctggaatgaacttcgaaacaagttctttcaggtcacatgta 557
||||| || ||||| |||||||| || ||||| ||||| || || || || ||||| | |
Sbjct: 359 atctctttgccaatcacttctggtataaactttgaaaccagctccttaagatcacaggaa 300
Query: 558 gaagcctggttgatcataatctcaaccatcttacggcggatctgacggatctgggatgcc 617
|| |||||||| | |||||| || |||||||| ||||||||||| ||||||| |||||||
Sbjct: 299 gaggcctggttcaccataatgtccaccatcttgcggcggatctgccggatctaggatgcc 240
Query: 618 tgagcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaac 677
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 239 tgagcatagcacgttctcttgacctggtttgggcgcctcttggtgaagccaatgcagaac 180
Query: 678 aaacgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgc 737
|| |||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 179 aagcgcagcatgtagttgtcagttgtcttgacatcaacatgggcttcaattaatgtctgc 120
Query: 738 cacttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtg 797
|||||||||||||||||||| |||||||| || |||||| |||| |||||||||||||||
Sbjct: 119 cacttcttcactagggatctgagtttatcggtagtaaaactcatgccccaaaagtttgtg 60
Query: 798 agcacattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatc 856
||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 59 agcacatccctgccttgcacatcttcagcacggagcctgattttcctgtaagcctgatc 1
>gb|BM324198.1|BM324198 PIC1_25_E08.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 478
Score = 642 bits (324), Expect = 0.0
Identities = 429/464 (92%)
Strand = Plus / Minus
Query: 532 aaacaagttctttcaggtcacatgtagaagcctggttgatcataatctcaaccatcttac 591
||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct: 472 aaacaagctctttcaggtcacatgtagaagcctggttggccataatctcaaccatcttgc 413
Query: 592 ggcggatctgacggatctgggatgcctgagcatagcaggttctcttgacctggtttgggc 651
|||||||||| ||||||||||| ||||| ||||||||||||||||| ||||||||||| |
Sbjct: 412 ggcggatctggcggatctgggaagcctgggcatagcaggttctcttcacctggtttggac 353
Query: 652 gcctcttggtgaagccgatgcagaacaaacgcaacatgtagttgtcggttgtcttgacat 711
|||||||||||||||| ||||||||||| |||| |||||||||||| ||||| |||||||
Sbjct: 352 gcctcttggtgaagccaatgcagaacaagcgcagcatgtagttgtcagttgttttgacat 293
Query: 712 caacatgggcttcgattaatgtctgccacttcttcactagggatctcagtttatcagtgg 771
||||||||||||| || | ||||||||||||||| || |||||||| ||||||||||| |
Sbjct: 292 caacatgggcttcaatgagtgtctgccacttcttgaccagggatctgagtttatcagtag 233
Query: 772 taaaattcataccccaaaagtttgtgagcacattcctgccctgcacatcttcagcacgga 831
|||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 232 taaatgacattccccaaaagtttgtgagcacattcctgccttgcacatcttcagcacgaa 173
Query: 832 gcctgattttcctgtaagcttgatcctcgtcgccctgaagatcagctaggcaaacctcaa 891
|||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 172 gcctgattttccggtaagcctgatcctcgtcaccctgaagatcagctaggcaaacctcaa 113
Query: 892 agactctgtgcttcagaccctcagaagcaatcctggtaccctgtgtcctggatacgagag 951
||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 112 agactctatgcttcagaccctcagatgcaatcctggtaccctgtgtcctggacacgagag 53
Query: 952 tcttcccgatgttgcgcacactgaacaccgacggtgccttgatg 995
||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 52 tcttcccaatgttgcgcacactgaacaccgacggggccttgatg 9
>gb|BG560038.1|BG560038 RHIZ2_68_F08.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 495
Score = 640 bits (323), Expect = 0.0
Identities = 410/439 (93%)
Strand = Plus / Minus
Query: 652 gcctcttggtgaagccgatgcagaacaaacgcaacatgtagttgtcggttgtcttgacat 711
|||||||||||||||| ||||||||||| |||| |||||||||||| ||||| |||||||
Sbjct: 495 gcctcttggtgaagccaatgcagaacaagcgcagcatgtagttgtcagttgttttgacat 436
Query: 712 caacatgggcttcgattaatgtctgccacttcttcactagggatctcagtttatcagtgg 771
||||||||||||| || | ||||||||||||||| || |||||||| ||||||||||| |
Sbjct: 435 caacatgggcttcaatgagtgtctgccacttcttgaccagggatctgagtttatcagtag 376
Query: 772 taaaattcataccccaaaagtttgtgagcacattcctgccctgcacatcttcagcacgga 831
|||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 375 taaatgacattccccaaaagtttgtgagcacattcctgccttgcacatcttcagcacgga 316
Query: 832 gcctgattttcctgtaagcttgatcctcgtcgccctgaagatcagctaggcaaacctcaa 891
|||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 315 gcctgattttccggtaagcctgatcctcgtcaccctgaagatcagctaggcaaacctcaa 256
Query: 892 agactctgtgcttcagaccctcagaagcaatcctggtaccctgtgtcctggatacgagag 951
||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 255 agactctatgcttcagaccctcagaagcaatcctggtaccctgtgtcctggacacgagag 196
Query: 952 tcttcccgatgttgcgcacactgaacaccgacggtgccttgatgtcataccaatccttct 1011
||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 195 tcttcccaatgttgcgcacactgaacaccgacggggccttgatgtcataccaatccttct 136
Query: 1012 tagagaaagggtcgacggtctttttcttgccacccttctttcccttggagatcctcttgt 1071
||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 135 tagagaaggggtcgacggtcttcttcttcccacccttctttcccttggagatcctcttgt 76
Query: 1072 tctttccgacagccatggt 1090
|||| ||||| ||||||||
Sbjct: 75 tcttgccgactgccatggt 57
>gb|AW678507.1|AW678507 WS1_16_H06.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 515
Score = 636 bits (321), Expect = e-180
Identities = 417/449 (92%)
Strand = Plus / Minus
Query: 642 tggtttgggcgcctcttggtgaagccgatgcagaacaaacgcaacatgtagttgtcggtt 701
|||||||| ||||||||||||||||| ||||||||||| |||| |||||||||||| |||
Sbjct: 515 tggtttggacgcctcttggtgaagccaatgcagaacaagcgcagcatgtagttgtcagtt 456
Query: 702 gtcttgacatcaacatgggcttcgattaatgtctgccacttcttcactagggatctcagt 761
|| |||||||||||||||||||| || | ||||||||||||||| || |||||||| |||
Sbjct: 455 gttttgacatcaacatgggcttcaatgagtgtctgccacttcttgaccagggatctgagt 396
Query: 762 ttatcagtggtaaaattcataccccaaaagtttgtgagcacattcctgccctgcacatct 821
|||||||| ||||| ||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 395 ttatcagtagtaaatgacattccccaaaagtttgtgagcacattcctgccttgcacatct 336
Query: 822 tcagcacggagcctgattttcctgtaagcttgatcctcgtcgccctgaagatcagctagg 881
|||||||| ||||||||||||| |||||| ||||||||||| ||||||||||||||||||
Sbjct: 335 tcagcacgaagcctgattttccggtaagcctgatcctcgtcaccctgaagatcagctagg 276
Query: 882 caaacctcaaagactctgtgcttcagaccctcagaagcaatcctggtaccctgtgtcctg 941
||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 275 caaacctcaaagactctatgcttcagaccctcagatgcaatcctggtaccctgtgtcctg 216
Query: 942 gatacgagagtcttcccgatgttgcgcacactgaacaccgacggtgccttgatgtcatac 1001
|| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 215 gacacgagagtcttcccaatgttgcgcacactgaacaccgacggggccttgatgtcatac 156
Query: 1002 caatccttcttagagaaagggtcgacggtctttttcttgccacccttctttcccttggag 1061
||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 155 caatccttcttagagaaggggtcgacggtcttcttcttcccacccttctttcccttggag 96
Query: 1062 atcctcttgttctttccgacagccatggt 1090
|||||||||||||| ||||| ||||||||
Sbjct: 95 atcctcttgttcttgccgactgccatggt 67
>gb|BE362353.1|BE362353 DG1_86_C10.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 564
Score = 626 bits (316), Expect = e-177
Identities = 409/440 (92%)
Strand = Plus / Minus
Query: 651 cgcctcttggtgaagccgatgcagaacaaacgcaacatgtagttgtcggttgtcttgaca 710
||||||||||||||||| ||||||||||| |||| |||||||||||| ||||| ||||||
Sbjct: 561 cgcctcttggtgaagccaatgcagaacaagcgcagcatgtagttgtcagttgttttgaca 502
Query: 711 tcaacatgggcttcgattaatgtctgccacttcttcactagggatctcagtttatcagtg 770
|||||||||||||| || | ||||||||||||||| || |||||||| |||||||||||
Sbjct: 501 tcaacatgggcttcaatgagtgtctgccacttcttgaccagggatctgagtttatcagta 442
Query: 771 gtaaaattcataccccaaaagtttgtgagcacattcctgccctgcacatcttcagcacgg 830
||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 441 gtaaatgacattccccaaaagtttgtgagcacattcctgccttgcacatcttcagcacga 382
Query: 831 agcctgattttcctgtaagcttgatcctcgtcgccctgaagatcagctaggcaaacctca 890
||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 agcctgattttccggtaagcctgatcctcgtcaccctgaagatcagctaggcaaacctca 322
Query: 891 aagactctgtgcttcagaccctcagaagcaatcctggtaccctgtgtcctggatacgaga 950
|||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 321 aagactctatgcttcagaccctcagatgcaatcctggtaccctgtgtcctggacacgaga 262
Query: 951 gtcttcccgatgttgcgcacactgaacaccgacggtgccttgatgtcataccaatccttc 1010
|||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 261 gtcttcccaatgttgcgcacactgaacaccgacggggccttgatgtcataccaatccttc 202
Query: 1011 ttagagaaagggtcgacggtctttttcttgccacccttctttcccttggagatcctcttg 1070
|||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 201 ttagagaaggggtcgacggtcttcttcttcccacccttctttcccttggagatcctcttg 142
Query: 1071 ttctttccgacagccatggt 1090
||||| ||||| ||||||||
Sbjct: 141 ttcttgccgactgccatggt 122
>gb|CD213543.1|CD213543 HS1_41_B02.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_41_B02_A012 5', mRNA sequence
Length = 569
Score = 624 bits (315), Expect = e-177
Identities = 405/435 (93%)
Strand = Plus / Minus
Query: 656 cttggtgaagccgatgcagaacaaacgcaacatgtagttgtcggttgtcttgacatcaac 715
|||||||||||| ||||||||||| |||| |||||||||||| ||||| |||||||||||
Sbjct: 569 cttggtgaagccaatgcagaacaagcgcagcatgtagttgtcagttgttttgacatcaac 510
Query: 716 atgggcttcgattaatgtctgccacttcttcactagggatctcagtttatcagtggtaaa 775
||||||||| || | ||||||||||||||| || |||||||| ||||||||||| |||||
Sbjct: 509 atgggcttcaatgagtgtctgccacttcttgaccagggatctgagtttatcagtagtaaa 450
Query: 776 attcataccccaaaagtttgtgagcacattcctgccctgcacatcttcagcacggagcct 835
||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 449 tgacattccccaaaagtttgtgagcacattcctgccttgcacatcttcagcacggagcct 390
Query: 836 gattttcctgtaagcttgatcctcgtcgccctgaagatcagctaggcaaacctcaaagac 895
|||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 389 gattttccggtaagcctgatcctcgtcaccctgaagatcagctaggcaaacctcaaagac 330
Query: 896 tctgtgcttcagaccctcagaagcaatcctggtaccctgtgtcctggatacgagagtctt 955
||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 329 tctatgcttcagaccctcagaagcaatcctggtaccctgtgtcctggacacgagagtctt 270
Query: 956 cccgatgttgcgcacactgaacaccgacggtgccttgatgtcataccaatccttcttaga 1015
||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 269 cccaatgttgcgcacactgaacaccgacggggccttgatgtcataccaatccttcttgga 210
Query: 1016 gaaagggtcgacggtctttttcttgccacccttctttcccttggagatcctcttgttctt 1075
||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 209 gaaggggtcgacggtcttcttcttcccacccttctttcccttggagatcctcttgttctt 150
Query: 1076 tccgacagccatggt 1090
||||| ||||||||
Sbjct: 149 gccgactgccatggt 135
>gb|BG052841.1|BG052841 RHIZ2_14_G07.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 493
Score = 603 bits (304), Expect = e-170
Identities = 406/440 (92%)
Strand = Plus / Minus
Query: 651 cgcctcttggtgaagccgatgcagaacaaacgcaacatgtagttgtcggttgtcttgaca 710
||||||||||||||||| ||||||||||| |||| |||||||||||| ||||| ||||||
Sbjct: 492 cgcctcttggtgaagccaatgcagaacaagcgcagcatgtagttgtcagttgttttgaca 433
Query: 711 tcaacatgggcttcgattaatgtctgccacttcttcactagggatctcagtttatcagtg 770
|||||||||||||| || | ||||||||||||||| | |||||||| |||||||||||
Sbjct: 432 tcaacatgggcttcaatgagtgtctgccacttcttgcccagggatctgagtttatcagta 373
Query: 771 gtaaaattcataccccaaaagtttgtgagcacattcctgccctgcacatcttcagcacgg 830
||||| ||| ||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 372 gtaaatgacattccccaaaagtttgtgagcacattcctgccttgcgcatcttcagcacgg 313
Query: 831 agcctgattttcctgtaagcttgatcctcgtcgccctgaagatcagctaggcaaacctca 890
||| ||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 312 agcatgattttccggtaagcatgatcctcgtcaccctgaagatcagctaggcaaacctca 253
Query: 891 aagactctgtgcttcagaccctcagaagcaatcctggtaccctgtgtcctggatacgaga 950
|||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 252 aagactatatgcttcagaccctcagaagcaatcctggtaccctgtgtcctggacacgaga 193
Query: 951 gtcttcccgatgttgcgcacactgaacaccgacggtgccttgatgtcataccaatccttc 1010
|||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 192 gtcttcccaatgttgcgcacactgaacaccgacggggcgttgatgtcataccaatccttc 133
Query: 1011 ttagagaaagggtcgacggtctttttcttgccacccttctttcccttggagatcctcttg 1070
|||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 132 ttagagaaggggtcgacggtcttcttcttcccacccttctttcccttggagatcctcttg 73
Query: 1071 ttctttccgacagccatggt 1090
||||| ||||| ||||||||
Sbjct: 72 ttcttgccgactgccatggt 53
>gb|BM325519.1|BM325519 PIC1_45_E10.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 555
Score = 599 bits (302), Expect = e-169
Identities = 397/429 (92%)
Strand = Plus / Minus
Query: 662 gaagccgatgcagaacaaacgcaacatgtagttgtcggttgtcttgacatcaacatgggc 721
|||||| ||||||||||| |||| |||||||||||| ||||| |||||||||||||||||
Sbjct: 555 gaagccaatgcagaacaagcgcagcatgtagttgtcagttgttttgacatcaacatgggc 496
Query: 722 ttcgattaatgtctgccacttcttcactagggatctcagtttatcagtggtaaaattcat 781
||| || | ||||||||||||||| || |||||||| ||||||||||| ||||| |||
Sbjct: 495 ttcaatgagtgtctgccacttcttgaccagggatctgagtttatcagtagtaaatgacat 436
Query: 782 accccaaaagtttgtgagcacattcctgccctgcacatcttcagcacggagcctgatttt 841
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |
Sbjct: 435 tccccaaaagtttgtgagcacattcctgccttgcacatcttcagcacgaagcctgattnt 376
Query: 842 cctgtaagcttgatcctcgtcgccctgaagatcagctaggcaaacctcaaagactctgtg 901
|| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 375 ccggtaagcctgatcctcgtcaccctgaagatcagctaggcaaacctcaaagactctatg 316
Query: 902 cttcagaccctcagaagcaatcctggtaccctgtgtcctggatacgagagtcttcccgat 961
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 315 cttcagaccctcagatgcaatcctggtaccctgtgtcctggacacgagagtcttcccaat 256
Query: 962 gttgcgcacactgaacaccgacggtgccttgatgtcataccaatccttcttagagaaagg 1021
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 255 gttgcgcacactgaacaccgacggggccttgatgtcataccaatccttcttagagaaggg 196
Query: 1022 gtcgacggtctttttcttgccacccttctttcccttggagatcctcttgttctttccgac 1081
|||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 195 gtcgacggtcttcttcttcccacccttctttcccttggagatcctcttgttcttgccgac 136
Query: 1082 agccatggt 1090
||||||||
Sbjct: 135 tgccatggt 127
>gb|BE594510.1|BE594510 PI1_34_B09.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 572
Score = 597 bits (301), Expect = e-169
Identities = 404/437 (92%), Gaps = 1/437 (0%)
Strand = Plus / Minus
Query: 655 tcttggtgaagccgatgcagaacaaacgcaacatgtagttgtcggttgtcttgacatcaa 714
||||||||||||| ||||||||||| |||| |||||||||||| ||||| ||||||||||
Sbjct: 571 tcttggtgaagccaatgcagaacaagcgcagcatgtagttgtcagttgttttgacatcaa 512
Query: 715 catgggcttcgattaatgtctgccacttcttcactagggatctcagtttatcagtggtaa 774
|||||||||| || | ||||||||||||||| || |||||||| ||||||||||| ||||
Sbjct: 511 catgggcttcaatgagtgtctgccacttcttgaccagggatctgagtttatcagtagtaa 452
Query: 775 aattcataccccaaaagtttgtgagcacattcctgccctgcacatcttcagcacggagcc 834
| ||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 451 atgacattccccaaaagtttgtgagcacattcctgccttgcacatcttcagcacgaagcc 392
Query: 835 tgattttcctgtaagcttgatcctcgtcgccctgaagatcagctaggcaaacctcaaaga 894
||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 391 tgattttccggtaagcctgatcctcgtcaccctgaagatcagctaggcaaacctcaaaga 332
Query: 895 ctctgtgcttcagaccctcagaagcaatcctggtaccctgtgtcctggatacgagagtct 954
|||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 331 ctctatgcttcagaccctcagatgcaatcctggtaccctgtgtcctggacacgagagtct 272
Query: 955 tcccgatgttgcgcacactgaacaccgacggtgccttgatgtcataccaatccttcttag 1014
||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 271 tcctaatgttgcgcacactgaacaccgacggggccttgatgtcataccaatccttcttag 212
Query: 1015 agaaagggtcgacggtctttttcttgccacccttcttt-cccttggagatcctcttgttc 1073
|||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||
Sbjct: 211 agaaggggtcgacggtcttcttcttcccacccttctttccccttggagatcctcttgttc 152
Query: 1074 tttccgacagccatggt 1090
|| ||||| ||||||||
Sbjct: 151 ttgccgactgccatggt 135
>gb|CD213453.1|CD213453 HS1_41_B02.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_41_B02_A012 3', mRNA sequence
Length = 516
Score = 597 bits (301), Expect = e-169
Identities = 427/467 (91%), Gaps = 4/467 (0%)
Strand = Plus / Minus
Query: 201 aatcttagggccagatgaaaacacgtagccaagacaactctat-aagttcacgtcataag 259
||||||||||||||| | ||||| |||||||| |||| ||||| |||||||| |||||||
Sbjct: 467 aatcttagggccagaagcaaacaggtagccaatacaattctatgaagttcacatcataag 408
Query: 260 caacctcatgtccagactcgcctagatat---agaagtagcaaacaaactactcggcagc 316
|||||| |||||| | || |||||||| || ||||||||| |||||||||||||||
Sbjct: 407 caacctactgtccaaaatcttctagatattatagtagtagcaaataaactactcggcagc 348
Query: 317 agcaacctcctgcccagcctcatctccctcgacaggcctctcaagcttcacaccaacatc 376
|||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||
Sbjct: 347 agcaacctcctgcccagcctcatctccctcaacaggcctctcgagcttcacacccacatc 288
Query: 377 ctctttgtagtcgccatgaacctccatgagcttcccaagatcgaacttgggggccttgag 436
||| |||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 287 ctccttgtagtcaccatgaacctccatgagcttcccgagatcaaacttgggagccttgag 228
Query: 437 tatcttcaccttgcggatgaagacgttttgaagtgggaagatgctggaggtagacttctc 496
|||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 227 tatcttcaccttgcggatgaagacattttggagtgggaagatgctggaggtggacttctc 168
Query: 497 aatctccttaccaataacttctggaatgaacttcgaaacaagttctttcaggtcacatgt 556
|||||| ||||||||||||||||| |||||||| |||||||| |||||||||||||||||
Sbjct: 167 aatctctttaccaataacttctgggatgaactttgaaacaagctctttcaggtcacatgt 108
Query: 557 agaagcctggttgatcataatctcaaccatcttacggcggatctgacggatctgggatgc 616
||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| ||
Sbjct: 107 agaagcctggttggccataatctcaaccatcttgcggcggatctggcggatctgggaagc 48
Query: 617 ctgagcatagcaggttctcttgacctggtttgggcgcctcttggtga 663
||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 47 ctgagcatagcaggttctcttcacctggtttggacgcctcttggtga 1
>gb|BI643592.1|BI643592 DG1_90_D06.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 553
Score = 579 bits (292), Expect = e-163
Identities = 394/428 (92%)
Strand = Plus / Minus
Query: 663 aagccgatgcagaacaaacgcaacatgtagttgtcggttgtcttgacatcaacatgggct 722
||||| ||||||||||| |||| |||||||||||| ||||| ||||||||| ||||||||
Sbjct: 553 aagccaatgcagaacaagcgcagcatgtagttgtcagttgttttgacatcagcatgggct 494
Query: 723 tcgattaatgtctgccacttcttcactagggatctcagtttatcagtggtaaaattcata 782
|| || | ||||||||||||||| || |||||||| ||||||||||| ||||| |||
Sbjct: 493 tcaatgagtgtctgccacttcttgaccagggatctgagtttatcagtagtaaatgacatt 434
Query: 783 ccccaaaagtttgtgagcacattcctgccctgcacatcttcagcacggagcctgattttc 842
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 433 ccccaaaagtttgtgagcacattcctgccttgcacatcttcagcacgaagcctgattttc 374
Query: 843 ctgtaagcttgatcctcgtcgccctgaagatcagctaggcaaacctcaaagactctgtgc 902
| |||||| ||||||||||| || |||||||||||||||||||||||||||||||| |||
Sbjct: 373 cggtaagcctgatcctcgtcaccgtgaagatcagctaggcaaacctcaaagactctatgc 314
Query: 903 ttcagaccctcagaagcaatcctggtaccctgtgtcctggatacgagagtcttcccgatg 962
|||||||||||||| |||||| ||||||||||||||||||| |||||||||||||| |||
Sbjct: 313 ttcagaccctcagatgcaatcttggtaccctgtgtcctggacacgagagtcttcccaatg 254
Query: 963 ttgcgcacactgaacaccgacggtgccttgatgtcataccaatccttcttagagaaaggg 1022
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 253 ttgcgcacactgaacaccgacggggccttgatgtcataccaatccttcttagagaagggg 194
Query: 1023 tcgacggtctttttcttgccacccttctttcccttggagatcctcttgttctttccgaca 1082
||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 193 tcgacggtcttcttcttcccacccttctttcccttggagatcctcttgttcttgccgact 134
Query: 1083 gccatggt 1090
||||||||
Sbjct: 133 gccatggt 126
>gb|CF428434.1|CF428434 PH1_15_D09.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_15_D09_A002 3', mRNA sequence
Length = 502
Score = 577 bits (291), Expect = e-163
Identities = 414/453 (91%), Gaps = 4/453 (0%)
Strand = Plus / Minus
Query: 201 aatcttagggccagatgaaaacacgtagccaagacaactctat-aagttcacgtcataag 259
||||||||||||||| | ||||| |||||||| |||| ||||| |||||||| |||||||
Sbjct: 454 aatcttagggccagaagcaaacaggtagccaatacaattctatgaagttcacatcataag 395
Query: 260 caacctcatgtccagactcgcctagatat---agaagtagcaaacaaactactcggcagc 316
|||||| |||||| | || |||||||| || ||||||||| |||||||||||||||
Sbjct: 394 caacctactgtccaaaatcttctagatattatagtagtagcaaataaactactcggcagc 335
Query: 317 agcaacctcctgcccagcctcatctccctcgacaggcctctcaagcttcacaccaacatc 376
|||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct: 334 agcaacctcctgcccagcctcatctccctcaacaggcctctcaagcttcacccccacatc 275
Query: 377 ctctttgtagtcgccatgaacctccatgagcttcccaagatcgaacttgggggccttgag 436
||| |||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 274 ctccttgtagtcaccatgaacctccatgagcttcccgagatcaaacttgggagccttgag 215
Query: 437 tatcttcaccttgcggatgaagacgttttgaagtgggaagatgctggaggtagacttctc 496
|||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 214 tatcttcaccttgcggatgaagacattttggagtgggaagatgctggaggtggacttctc 155
Query: 497 aatctccttaccaataacttctggaatgaacttcgaaacaagttctttcaggtcacatgt 556
|||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 154 aatctctttaccaataacttctggaatgaactttgaaacaagctctttcaggtcacatgt 95
Query: 557 agaagcctggttgatcataatctcaaccatcttacggcggatctgacggatctgggatgc 616
||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| ||
Sbjct: 94 agaagcctggttggccataatctcaaccatcttgcggcggatctggcggatctgggaagc 35
Query: 617 ctgagcatagcaggttctcttgacctggtttgg 649
||| ||||||||||||||||| |||||||||||
Sbjct: 34 ctgggcatagcaggttctcttcacctggtttgg 2
>gb|BG050679.1|BG050679 FM1_71_D10.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 473
Score = 569 bits (287), Expect = e-160
Identities = 413/453 (91%), Gaps = 4/453 (0%)
Strand = Plus / Minus
Query: 201 aatcttagggccagatgaaaacacgtagccaagacaactctat-aagttcacgtcataag 259
||||||||||||||| | ||||| |||||||| |||| ||||| |||||||| |||||||
Sbjct: 453 aatcttagggccagaagcaaacaggtagccaatacaattctatgaagttcacatcataag 394
Query: 260 caacctcatgtccagactcgcctagatat---agaagtagcaaacaaactactcggcagc 316
|||||| |||||| | || |||||||| || ||||||||| |||||||||||||||
Sbjct: 393 caacctactgtccaaaatcttctagatattatagtagtagcaaataaactactcggcagc 334
Query: 317 agcaacctcctgcccagcctcatctccctcgacaggcctctcaagcttcacaccaacatc 376
|||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||
Sbjct: 333 agcaacctcctgcccagcctcatctccctcaacaggcctctcgagcttcacacccacatc 274
Query: 377 ctctttgtagtcgccatgaacctccatgagcttcccaagatcgaacttgggggccttgag 436
||| |||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 273 ctccttgtagtcaccatgaacctccatgagcttcccgagatcaaacttgggagccttgag 214
Query: 437 tatcttcaccttgcggatgaagacgttttgaagtgggaagatgctggaggtagacttctc 496
|||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 213 tatcttcaccttgcggatgaagacattttggagtgggaagatgctggaggtggacttctc 154
Query: 497 aatctccttaccaataacttctggaatgaacttcgaaacaagttctttcaggtcacatgt 556
|||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 153 aatctctttaccaataacttctggaatgaactttgaaacaagctctttcaggtcacatgt 94
Query: 557 agaagcctggttgatcataatctcaaccatcttacggcggatctgacggatctgggatgc 616
||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| ||
Sbjct: 93 agaagcctggttggccataatctcaaccatcttgcggcggatctggcggatctgggaagc 34
Query: 617 ctgagcatagcaggttctcttgacctggtttgg 649
|||||||||||| | |||||| |||||||||||
Sbjct: 33 ctgagcatagcaaggtctcttcacctggtttgg 1
>gb|BE593246.1|BE593246 WS1_99_D04.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 471
Score = 553 bits (279), Expect = e-155
Identities = 399/437 (91%), Gaps = 4/437 (0%)
Strand = Plus / Minus
Query: 201 aatcttagggccagatgaaaacacgtagccaagacaactctat-aagttcacgtcataag 259
||||||||||||||| | ||||| |||||||| |||| ||||| |||||||| |||||||
Sbjct: 445 aatcttagggccagaagcaaacaggtagccaatacaattctatgaagttcacatcataag 386
Query: 260 caacctcatgtccagactcgcctagatat---agaagtagcaaacaaactactcggcagc 316
|||||| |||||| | || |||||||| || ||||||||| |||||||||||||||
Sbjct: 385 caacctactgtccaaaatcttctagatattatagtagtagcaaataaactactcggcagc 326
Query: 317 agcaacctcctgcccagcctcatctccctcgacaggcctctcaagcttcacaccaacatc 376
|||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct: 325 agcaacctcctgcccagcctcatctccctcaacaggcctctcaagcttcacccccacatc 266
Query: 377 ctctttgtagtcgccatgaacctccatgagcttcccaagatcgaacttgggggccttgag 436
||| |||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 265 ctccttgtagtcaccatgaacctccatgagcttcccgagatcaaacttgggagccttgag 206
Query: 437 tatcttcaccttgcggatgaagacgttttgaagtgggaagatgctggaggtagacttctc 496
|||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 205 tatcttcaccttgcggatgaagacattttggagtgggaagatgctggaggtggacttctc 146
Query: 497 aatctccttaccaataacttctggaatgaacttcgaaacaagttctttcaggtcacatgt 556
|||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 145 aatctctttaccaataacttctggaatgaactttgaaacaagctctttcaggtcacatgt 86
Query: 557 agaagcctggttgatcataatctcaaccatcttacggcggatctgacggatctgggatgc 616
||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| ||
Sbjct: 85 agaagcctggttggccataatctcaaccatcttgcggcggatctggcggatctgggaagc 26
Query: 617 ctgagcatagcaggttc 633
||| |||||||||||||
Sbjct: 25 ctgggcatagcaggttc 9
>gb|BE593660.1|BE593660 WS1_99_D04.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 498
Score = 553 bits (279), Expect = e-155
Identities = 399/437 (91%), Gaps = 4/437 (0%)
Strand = Plus / Minus
Query: 201 aatcttagggccagatgaaaacacgtagccaagacaactctat-aagttcacgtcataag 259
||||||||||||||| | ||||| |||||||| |||| ||||| |||||||| |||||||
Sbjct: 445 aatcttagggccagaagcaaacaggtagccaatacaattctatgaagttcacatcataag 386
Query: 260 caacctcatgtccagactcgcctagatat---agaagtagcaaacaaactactcggcagc 316
|||||| |||||| | || |||||||| || ||||||||| |||||||||||||||
Sbjct: 385 caacctactgtccaaaatcttctagatattatagtagtagcaaataaactactcggcagc 326
Query: 317 agcaacctcctgcccagcctcatctccctcgacaggcctctcaagcttcacaccaacatc 376
|||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct: 325 agcaacctcctgcccagcctcatctccctcaacaggcctctcaagcttcacccccacatc 266
Query: 377 ctctttgtagtcgccatgaacctccatgagcttcccaagatcgaacttgggggccttgag 436
||| |||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 265 ctccttgtagtcaccatgaacctccatgagcttcccgagatcaaacttgggagccttgag 206
Query: 437 tatcttcaccttgcggatgaagacgttttgaagtgggaagatgctggaggtagacttctc 496
|||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 205 tatcttcaccttgcggatgaagacattttggagtgggaagatgctggaggtggacttctc 146
Query: 497 aatctccttaccaataacttctggaatgaacttcgaaacaagttctttcaggtcacatgt 556
|||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 145 aatctctttaccaataacttctggaatgaactttgaaacaagctctttcaggtcacatgt 86
Query: 557 agaagcctggttgatcataatctcaaccatcttacggcggatctgacggatctgggatgc 616
||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| ||
Sbjct: 85 agaagcctggttggccataatctcaaccatcttgcggcggatctggcggatctgggaagc 26
Query: 617 ctgagcatagcaggttc 633
||| |||||||||||||
Sbjct: 25 ctgggcatagcaggttc 9
>gb|BM328700.1|BM328700 PIC1_25_E08.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 499
Score = 547 bits (276), Expect = e-154
Identities = 396/434 (91%), Gaps = 4/434 (0%)
Strand = Plus / Minus
Query: 201 aatcttagggccagatgaaaacacgtagccaagacaactctat-aagttcacgtcataag 259
||||||||||||||| | ||||| |||||||| |||| ||||| |||||||| |||||||
Sbjct: 434 aatcttagggccagaagcaaacaggtagccaatacaattctatgaagttcacatcataag 375
Query: 260 caacctcatgtccagactcgcctagatat---agaagtagcaaacaaactactcggcagc 316
|||||| |||||| | || |||||||| || ||||||||| |||||||||||||||
Sbjct: 374 caacctactgtccaaaatcttctagatattatagtagtagcaaataaactactcggcagc 315
Query: 317 agcaacctcctgcccagcctcatctccctcgacaggcctctcaagcttcacaccaacatc 376
|||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct: 314 agcaacctcctgcccagcctcatctccctcaacaggcctctcaagcttcacccccacatc 255
Query: 377 ctctttgtagtcgccatgaacctccatgagcttcccaagatcgaacttgggggccttgag 436
||| |||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 254 ctccttgtagtcaccatgaacctccatgagcttcccgagatcaaacttgggagccttgag 195
Query: 437 tatcttcaccttgcggatgaagacgttttgaagtgggaagatgctggaggtagacttctc 496
|||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 194 tatcttcaccttgcggatgaagacattttggagtgggaagatgctggaggtggacttctc 135
Query: 497 aatctccttaccaataacttctggaatgaacttcgaaacaagttctttcaggtcacatgt 556
|||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 134 aatctctttaccaataacttctggaatgaactttgaaacaagctctttcaggtcacatgt 75
Query: 557 agaagcctggttgatcataatctcaaccatcttacggcggatctgacggatctgggatgc 616
||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| ||
Sbjct: 74 agaagcctggttggccataatctcaaccatcttgcggcggatctggcggatctgggaagc 15
Query: 617 ctgagcatagcagg 630
||| ||||||||||
Sbjct: 14 ctgggcatagcagg 1
>gb|AI724706.1|AI724706 RHIZ1_26_A01.y2_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 489
Score = 531 bits (268), Expect = e-149
Identities = 385/422 (91%), Gaps = 4/422 (0%)
Strand = Plus / Minus
Query: 201 aatcttagggccagatgaaaacacgtagccaagacaactctat-aagttcacgtcataag 259
||||||||||||||| | ||||| |||||||| |||| ||||| |||||||| |||||||
Sbjct: 427 aatcttagggccagaagcaaacaggtagccaatacaattctatgaagttcacatcataag 368
Query: 260 caacctcatgtccagactcgcctagatat---agaagtagcaaacaaactactcggcagc 316
|||||| |||||| | || |||||||| || ||||||||| |||||||||||||||
Sbjct: 367 caacctactgtccaaaatcttctagatattatagtagtagcaaataaactactcggcagc 308
Query: 317 agcaacctcctgcccagcctcatctccctcgacaggcctctcaagcttcacaccaacatc 376
|||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||
Sbjct: 307 agcaacctcctgcccagcctcatctccctcaacaggcctctcgagcttcacacccacatc 248
Query: 377 ctctttgtagtcgccatgaacctccatgagcttcccaagatcgaacttgggggccttgag 436
||| |||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 247 ctccttgtagtcaccatgaacctccatgagcttcccgagatcaaacttgggagccttgag 188
Query: 437 tatcttcaccttgcggatgaagacgttttgaagtgggaagatgctggaggtagacttctc 496
|||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 187 tatcttcaccttgcggatgaagacattttggagtgggaagatgctggaggtggacttctc 128
Query: 497 aatctccttaccaataacttctggaatgaacttcgaaacaagttctttcaggtcacatgt 556
|||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 127 aatctctttaccaataacttctggaatgaactttgaaacaagctctttcaggtcacatgt 68
Query: 557 agaagcctggttgatcataatctcaaccatcttacggcggatctgacggatctgggatgc 616
||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| ||
Sbjct: 67 agaagcctggttggccataatctcaaccatcttgcggcggatctggcggatctgggaagc 8
Query: 617 ct 618
||
Sbjct: 7 ct 6
>gb|BF422195.1|BF422195 FM1_13_A06.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 431
Score = 529 bits (267), Expect = e-148
Identities = 381/417 (91%), Gaps = 4/417 (0%)
Strand = Plus / Minus
Query: 201 aatcttagggccagatgaaaacacgtagccaagacaactctat-aagttcacgtcataag 259
||||||||||||||| | ||||| |||||||| |||| ||||| |||||||| |||||||
Sbjct: 417 aatcttagggccagaagcaaacaggtagccaatacaattctatgaagttcacatcataag 358
Query: 260 caacctcatgtccagactcgcctagatat---agaagtagcaaacaaactactcggcagc 316
|||||| |||||| | || |||||||| || ||||||||| |||||||||||||||
Sbjct: 357 caacctactgtccaaaatcttctagatattatagtagtagcaaataaactactcggcagc 298
Query: 317 agcaacctcctgcccagcctcatctccctcgacaggcctctcaagcttcacaccaacatc 376
|||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||
Sbjct: 297 agcaacctcctgcccagcctcatctccctcaacaggcctctcgagcttcacacccacatc 238
Query: 377 ctctttgtagtcgccatgaacctccatgagcttcccaagatcgaacttgggggccttgag 436
||| |||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 237 ctccttgtagtcaccatgaacctccatgagcttcccgagatcaaacttgggagccttgag 178
Query: 437 tatcttcaccttgcggatgaagacgttttgaagtgggaagatgctggaggtagacttctc 496
|||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 177 tatcttcaccttgcggatgaagacattttggagtgggaagatgctggaggtggacttctc 118
Query: 497 aatctccttaccaataacttctggaatgaacttcgaaacaagttctttcaggtcacatgt 556
|||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 117 aatctctttaccaataacttctggaatgaactttgaaacaagctctttcaggtcacatgt 58
Query: 557 agaagcctggttgatcataatctcaaccatcttacggcggatctgacggatctggga 613
||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 57 agaagcctggttggccataatctcaaccatcttgcggcggatctggcggatctggga 1
>gb|BF480817.1|BF480817 FM1_14_C08.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 443
Score = 525 bits (265), Expect = e-147
Identities = 325/345 (94%)
Strand = Plus / Minus
Query: 746 cactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagcacatt 805
|||||||||||| ||||||||||| |||||| |||| |||||||||||||||||||||||
Sbjct: 443 cactagggatctgagtttatcagtagtaaaactcatgccccaaaagtttgtgagcacatt 384
Query: 806 cctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcgtcgcc 865
|||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 383 cctgccttgcacatcttcagcacggagcctgattttcctgtaagcctgatcctcatcgcc 324
Query: 866 ctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagcaatcct 925
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ttgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagcaatcct 264
Query: 926 ggtaccctgtgtcctggatacgagagtcttcccgatgttgcgcacactgaacaccgacgg 985
|||||||||||||||||| || |||||||| || ||||||||||| |||||||| |||||
Sbjct: 263 ggtaccctgtgtcctggacactagagtcttgccaatgttgcgcacgctgaacacagacgg 204
Query: 986 tgccttgatgtcataccaatccttcttagagaaagggtcgacggtctttttcttgccacc 1045
|||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||
Sbjct: 203 ggccttgatgtcataccaatccttcttagagaaggggtcgacggtcttcttcttcccacc 144
Query: 1046 cttctttcccttggagatcctcttgttctttccgacagccatggt 1090
|||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 143 cttctttcccttcgagatcctcttgttctttccaacagccatggt 99
>gb|BF422248.1|BF422248 FM1_13_A06.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 386
Score = 515 bits (260), Expect = e-144
Identities = 314/332 (94%)
Strand = Plus / Minus
Query: 759 agtttatcagtggtaaaattcataccccaaaagtttgtgagcacattcctgccctgcaca 818
||||||||||| ||||| ||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 386 agtttatcagtagtaaatgacattccccaaaagtttgtgagcacattcctgccttgcaca 327
Query: 819 tcttcagcacggagcctgattttcctgtaagcttgatcctcgtcgccctgaagatcagct 878
||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||
Sbjct: 326 tcttcagcacggagcctgattttccggtaagcctgatcctcgtcaccctgaagatcagct 267
Query: 879 aggcaaacctcaaagactctgtgcttcagaccctcagaagcaatcctggtaccctgtgtc 938
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 266 aggcaaacctcaaagactctatgcttcagaccctcagaagcaatcctggtaccctgtgtc 207
Query: 939 ctggatacgagagtcttcccgatgttgcgcacactgaacaccgacggtgccttgatgtca 998
||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 206 ctggacacgagagtcttcccaatgttgcgcacactgaacaccgacggggccttgatgtca 147
Query: 999 taccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttcccttg 1058
|||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||
Sbjct: 146 taccaatccttcttagagaaggggtcgacggtcttcttcttcccacccttctttcccttg 87
Query: 1059 gagatcctcttgttctttccgacagccatggt 1090
||||||||||||||||| ||||| ||||||||
Sbjct: 86 gagatcctcttgttcttgccgactgccatggt 55
>gb|BE358248.1|BE358248 DG1_27_C08.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 397
Score = 498 bits (251), Expect = e-139
Identities = 316/338 (93%)
Strand = Plus / Minus
Query: 753 gatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagcacattcctgccc 812
||||| ||||||||||| ||||| ||| |||||||||||||||||||||||||||||
Sbjct: 397 gatctgagtttatcagtagtaaatgacattccccaaaagtttgtgagcacattcctgcct 338
Query: 813 tgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcgtcgccctgaaga 872
||||||||||||||||| ||||||||| ||| |||||| ||||||||||| |||||||||
Sbjct: 337 tgcacatcttcagcacgaagcctgattntccggtaagcctgatcctcgtcaccctgaaga 278
Query: 873 tcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagcaatcctggtaccc 932
|||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 277 tcagctaggcaaacctcaaagactctatgcttcagaccctcagatgcaatcctggtaccc 218
Query: 933 tgtgtcctggatacgagagtcttcccgatgttgcgcacactgaacaccgacggtgccttg 992
||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 217 tgtgtcctggacacgagagtcttcccaatgttgcgcacactgaacaccgacggggccttg 158
Query: 993 atgtcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttcttt 1052
|||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||
Sbjct: 157 atgtcataccaatccttcttagagaaggggtcgacggtcttcttcttcccacccttcttt 98
Query: 1053 cccttggagatcctcttgttctttccgacagccatggt 1090
||||||||||||||||||||||| ||||| ||||||||
Sbjct: 97 cccttggagatcctcttgttcttgccgactgccatggt 60
>gb|BG558764.1|BG558764 RHIZ2_56_C04.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 423
Score = 486 bits (245), Expect = e-135
Identities = 301/320 (94%)
Strand = Plus / Minus
Query: 771 gtaaaattcataccccaaaagtttgtgagcacattcctgccctgcacatcttcagcacgg 830
|||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 422 gtaaaactcatgccccaaaagtttgtgagcacattcctgccttgcacatcttcagcacgg 363
Query: 831 agcctgattttcctgtaagcttgatcctcgtcgccctgaagatcagctaggcaaacctca 890
|||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||
Sbjct: 362 agcctgattttcctgtaagcctgatcctcctcgccttgaagatcagctaggcaaacctca 303
Query: 891 aagactctgtgcttcagaccctcagaagcaatcctggtaccctgtgtcctggatacgaga 950
|||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 302 aagactntgtgcttcagaccctcagaagcaatcctggtaccctgtgtcctggacactaga 243
Query: 951 gtcttcccgatgttgcgcacactgaacaccgacggtgccttgatgtcataccaatccttc 1010
||||| || ||||||||||| |||||||| ||||| ||||||||||||||||||||||||
Sbjct: 242 gtcttgccaatgttgcgcacgctgaacacagacggggccttgatgtcataccaatccttc 183
Query: 1011 ttagagaaagggtcgacggtctttttcttgccacccttctttcccttggagatcctcttg 1070
|||||||| |||||||||||||| ||||| ||||||||||||||||| ||||||||||||
Sbjct: 182 ttagagaaggggtcgacggtcttcttcttcccacccttctttcccttcgagatcctcttg 123
Query: 1071 ttctttccgacagccatggt 1090
|||||||| |||||||||||
Sbjct: 122 ttctttccaacagccatggt 103
>gb|CF758342.1|CF758342 DSAF1_30_F02.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_30_F02_A011 3', mRNA sequence
Length = 519
Score = 470 bits (237), Expect = e-130
Identities = 378/423 (89%), Gaps = 4/423 (0%)
Strand = Plus / Minus
Query: 201 aatcttagggccagatgaaaacacgtagccaagacaactctat-aagttcacgtcataag 259
||||||||||||| | | ||||| |||||||| |||| ||||| |||||||| |||||||
Sbjct: 426 aatcttagggccaaaagcaaacaggtagccaatacaattctatgaagttcacatcataag 367
Query: 260 caacctcatgtccagactcgcctagatat---agaagtagcaaacaaactactcggcagc 316
|||||| |||||| | || ||| |||| || ||||||||| |||||||||||||||
Sbjct: 366 caacctactgtccaaaatcttctaaatattatagtagtagcaaataaactactcggcagc 307
Query: 317 agcaacctcctgcccagcctcatctccctcgacaggcctctcaagcttcacaccaacatc 376
|||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct: 306 agcaacctcctgcccagcctcatctccctcaacaggcctctcaagcttcacccccacatc 247
Query: 377 ctctttgtagtcgccatgaacctccatgagcttcccaagatcgaacttgggggccttgag 436
||| |||||||| ||||||||||||||||||||||| | ||| |||||||| ||||||||
Sbjct: 246 ctccttgtagtcaccatgaacctccatgagcttcccgaaatcaaacttgggagccttgag 187
Query: 437 tatcttcaccttgcggatgaagacgttttgaagtgggaagatgctggaggtagacttctc 496
||||||||||||||||||||| || ||||| |||||||| |||||||||| ||||||||
Sbjct: 186 tatcttcaccttgcggatgaaaacattttggagtgggaaaatgctggagggggacttctc 127
Query: 497 aatctccttaccaataacttctggaatgaacttcgaaacaagttctttcaggtcacatgt 556
|||||| |||||||||||||||||||||||||| |||||||| || ||||||||||||||
Sbjct: 126 aatctctttaccaataacttctggaatgaactttgaaacaagctcattcaggtcacatgt 67
Query: 557 agaagcctggttgatcataatctcaaccatcttacggcggatctgacggatctgggatgc 616
| ||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| ||
Sbjct: 66 aaaagcctggttggccataatctcaaccatcttgcggcggatctggcggatctgggaagc 7
Query: 617 ctg 619
|||
Sbjct: 6 ctg 4
>gb|CF758951.1|CF758951 DSAF1_38_E04.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_38_E04_A011 3', mRNA sequence
Length = 444
Score = 430 bits (217), Expect = e-118
Identities = 319/351 (90%), Gaps = 4/351 (1%)
Strand = Plus / Minus
Query: 201 aatcttagggccagatgaaaacacgtagccaagacaactctat-aagttcacgtcataag 259
||||||||||||||| | ||||| |||||||| |||| ||||| |||||||| |||||||
Sbjct: 351 aatcttagggccagaagcaaacaggtagccaatacaattctatgaagttcacatcataag 292
Query: 260 caacctcatgtccagactcgcctagatat---agaagtagcaaacaaactactcggcagc 316
|||||| |||||| | || |||||||| || ||||||||| |||||||||||||||
Sbjct: 291 caacctactgtccaaaatcttctagatattatagtagtagcaaataaactactcggcagc 232
Query: 317 agcaacctcctgcccagcctcatctccctcgacaggcctctcaagcttcacaccaacatc 376
|||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct: 231 agcaacctcctgcccagcctcatctccctcaacaggcctctcaagcttcacccccacatc 172
Query: 377 ctctttgtagtcgccatgaacctccatgagcttcccaagatcgaacttgggggccttgag 436
||| |||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 171 ctccttgtagtcaccatgaacctccatgagcttcccgagatcaaacttgggagccttgag 112
Query: 437 tatcttcaccttgcggatgaagacgttttgaagtgggaagatgctggaggtagacttctc 496
|||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 111 tatcttcaccttgcggatgaagacattttggagtgggaagatgctggaggtggacttctc 52
Query: 497 aatctccttaccaataacttctggaatgaacttcgaaacaagttctttcag 547
|||||| |||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 51 aatctctttaccaataacttctggaatgaactttgaaacaagctctttcag 1
>gb|CF760153.1|CF760153 DSAF1_56_B06.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_56_B06_A011 5', mRNA sequence
Length = 434
Score = 381 bits (192), Expect = e-103
Identities = 288/318 (90%), Gaps = 4/318 (1%)
Strand = Plus / Minus
Query: 201 aatcttagggccagatgaaaacacgtagccaagacaactctat-aagttcacgtcataag 259
||||||||||||||| | ||||| |||||||| |||| ||||| |||||||| |||||||
Sbjct: 318 aatcttagggccagaagcaaacaggtagccaatacaattctatgaagttcacatcataag 259
Query: 260 caacctcatgtccagactcgcctagatat---agaagtagcaaacaaactactcggcagc 316
|||||| |||||| | || |||||||| || ||||||||| |||||||||||||||
Sbjct: 258 caacctactgtccaaaatcttctagatattatagtagtagcaaataaactactcggcagc 199
Query: 317 agcaacctcctgcccagcctcatctccctcgacaggcctctcaagcttcacaccaacatc 376
|||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct: 198 agcaacctcctgcccagcctcatctccctcaacaggcctctcaagcttcacccccacatc 139
Query: 377 ctctttgtagtcgccatgaacctccatgagcttcccaagatcgaacttgggggccttgag 436
||| |||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 138 ctccttgtagtcaccatgaacctccatgagcttcccgagatcaaacttgggagccttgag 79
Query: 437 tatcttcaccttgcggatgaagacgttttgaagtgggaagatgctggaggtagacttctc 496
|||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 78 tatcttcaccttgcggatgaagacattttggagtgggaagatgctggaggtggacttctc 19
Query: 497 aatctccttaccaataac 514
|||||| |||||||||||
Sbjct: 18 aatctctttaccaataac 1
>gb|CF761777.1|CF761777 DSAF1_80_G06.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_80_G06_A011 3', mRNA sequence
Length = 411
Score = 381 bits (192), Expect = e-103
Identities = 288/318 (90%), Gaps = 4/318 (1%)
Strand = Plus / Minus
Query: 201 aatcttagggccagatgaaaacacgtagccaagacaactctat-aagttcacgtcataag 259
||||||||||||||| | ||||| |||||||| |||| ||||| |||||||| |||||||
Sbjct: 318 aatcttagggccagaagcaaacaggtagccaatacaattctatgaagttcacatcataag 259
Query: 260 caacctcatgtccagactcgcctagatat---agaagtagcaaacaaactactcggcagc 316
|||||| |||||| | || |||||||| || ||||||||| |||||||||||||||
Sbjct: 258 caacctactgtccaaaatcttctagatattatagtagtagcaaataaactactcggcagc 199
Query: 317 agcaacctcctgcccagcctcatctccctcgacaggcctctcaagcttcacaccaacatc 376
|||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct: 198 agcaacctcctgcccagcctcatctccctcaacaggcctctcaagcttcacccccacatc 139
Query: 377 ctctttgtagtcgccatgaacctccatgagcttcccaagatcgaacttgggggccttgag 436
||| |||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 138 ctccttgtagtcaccatgaacctccatgagcttcccgagatcaaacttgggagccttgag 79
Query: 437 tatcttcaccttgcggatgaagacgttttgaagtgggaagatgctggaggtagacttctc 496
|||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 78 tatcttcaccttgcggatgaagacattttggagtgggaagatgctggaggtggacttctc 19
Query: 497 aatctccttaccaataac 514
|||||| |||||||||||
Sbjct: 18 aatctctttaccaataac 1
>gb|BG050836.1|BG050836 FM1_71_D10.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 283
Score = 349 bits (176), Expect = 4e-094
Identities = 212/224 (94%)
Strand = Plus / Minus
Query: 867 tgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagcaatcctg 926
|||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct: 278 tgaagatcaggtaggcaaacctcaaagactctatgcttcagaccctcagaagcaatcgtg 219
Query: 927 gtaccctgtgtcctggatacgagagtcttcccgatgttgcgcacactgaacaccgacggt 986
||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 218 gtaccctgtgtcctggacacgagagtcttcccaatgttgcgcacactgaacaccgacggg 159
Query: 987 gccttgatgtcataccaatccttcttagagaaagggtcgacggtctttttcttgccaccc 1046
|| ||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||
Sbjct: 158 gcgttgatgtcataccaatccttcttagagaaggggtcgacggtcttcttcttcccaccc 99
Query: 1047 ttctttcccttggagatcctcttgttctttccgacagccatggt 1090
||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 98 ttctttcccttggagatcctcttgttcttgccgactgccatggt 55
>gb|BF480866.1|BF480866 FM1_14_C08.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 488
Score = 337 bits (170), Expect = 1e-090
Identities = 284/322 (88%)
Strand = Plus / Minus
Query: 318 gcaacctcctgcccagcctcatctccctcgacaggcctctcaagcttcacaccaacatcc 377
||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 322 gcaacctcctgtccagcctcatctccctcgacgggcctctcaagcttcacgccaacatcc 263
Query: 378 tctttgtagtcgccatgaacctccatgagcttcccaagatcgaacttgggggccttgagt 437
||||| ||||| |||||||||||||| ||||||||||| || ||||| |||||||| ||
Sbjct: 262 tctttatagtcaccatgaacctccataagcttcccaaggtcaaactttggggccttcagg 203
Query: 438 atcttcaccttgcggatgaagacgttttgaagtgggaagatgctggaggtagacttctca 497
|||||||||||||||||||| || || ||||| ||||||||||||||||||| ||||||
Sbjct: 202 atcttcaccttgcggatgaaaacattctgaagcgggaagatgctggaggtagctttctca 143
Query: 498 atctccttaccaataacttctggaatgaacttcgaaacaagttctttcaggtcacatgta 557
||||| || ||||| |||||||| || ||||| ||||| || || || || ||||| | |
Sbjct: 142 atctctttgccaatcacttctggtataaactttgaaaccagctccttaagatcacaggaa 83
Query: 558 gaagcctggttgatcataatctcaaccatcttacggcggatctgacggatctgggatgcc 617
|| |||||||| | |||||| || |||||||| ||||||||||| |||||||||||||||
Sbjct: 82 gaggcctggttcaccataatgtccaccatcttgcggcggatctgccggatctgggatgcc 23
Query: 618 tgagcatagcaggttctcttga 639
||||||||||| ||||||||||
Sbjct: 22 tgagcatagcacgttctcttga 1
>gb|BE362922.2|BE362922 DG1_90_D06.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 258
Score = 337 bits (170), Expect = 1e-090
Identities = 224/242 (92%)
Strand = Plus / Minus
Query: 372 acatcctctttgtagtcgccatgaacctccatgagcttcccaagatcgaacttgggggcc 431
|||| ||| ||||| || ||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 246 acattctccttgtattcaccatgaacctccatgagcttcccgagatcaaacttgggagcc 187
Query: 432 ttgagtatcttcaccttgcggatgaagacgttttgaagtgggaagatgctggaggtagac 491
||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || |||
Sbjct: 186 ttgagtatcttcaccttgcggatgaagacattttggagtgggaagatgctggacgtggac 127
Query: 492 ttctcaatctccttaccaataacttctggaatgaacttcgaaacaagttctttcaggtca 551
||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 126 ttctcaatctctttaccaataacttctggaatgaactttgaaacaagctctttcaggtca 67
Query: 552 catgtagaagcctggttgatcataatctcaaccatcttacggcggatctgacggatctgg 611
|||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||
Sbjct: 66 catgtagaagcctggttggccataatctcaaccatcttgcggcggatctggcggatctgg 7
Query: 612 ga 613
||
Sbjct: 6 ga 5
>gb|CF487781.1|CF487781 POL1_45_H06.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_45_H06_A002 5', mRNA sequence
Length = 779
Score = 317 bits (160), Expect = 1e-084
Identities = 541/668 (80%)
Strand = Plus / Minus
Query: 396 acctccatgagcttcccaagatcgaacttgggggccttgagtatcttcaccttgcggatg 455
|||||||||||||| || | |||||||| || || || || ||||||||||||||||||
Sbjct: 776 acctccatgagctttccgatgtcgaactttggtgcttttaggatcttcaccttgcggatg 717
Query: 456 aagacgttttgaagtgggaagatgctggaggtagacttctcaatctccttaccaataact 515
||||| ||||| | ||||| ||||| ||||| | ||||| || ||||| ||||| ||
Sbjct: 716 aagacattttgcaaggggaatatgctagaggtggctttctcgatttcctttccaatgacc 657
Query: 516 tctggaatgaacttcgaaacaagttctttcaggtcacatgtagaagcctggttgatcata 575
|| || |||||||| || || ||||||||||| ||||| || ||||| |||||| ||||
Sbjct: 656 tcagggatgaacttggacacgagttctttcagatcacaagttgaagcttggttgctcatg 597
Query: 576 atctcaaccatcttacggcggatctgacggatctgggatgcctgagcatagcaggttctc 635
|| ||| |||||| || || ||||| | ||| ||| ||| ||||||||||| || | |
Sbjct: 596 atttcagtcatcttccgacgaatctgtctgatttggcttgcttgagcatagcaagtgcgc 537
Query: 636 ttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaacgcaacatgtagttg 695
|| || || || || |||||||||||||| || |||||||||| ||| | |||||||||
Sbjct: 536 ttcacttgattgggccgcctcttggtgaacccaatgcagaacagacgtagcatgtagtta 477
Query: 696 tcggttgtcttgacatcaacatgggcttcgattaatgtctgccacttcttcactagggat 755
||||| ||||||||||||||||| || || || | |||||||| |||||||| || ||
Sbjct: 476 tcggtggtcttgacatcaacatgtgcctcaataagcgtctgccatttcttcaccagtgaa 417
Query: 756 ctcagtttatcagtggtaaaattcataccccaaaagtttgtgagcacattcctgccctgc 815
| || || || || || || |||||||||| ||||||||||| ||||| || || ||
Sbjct: 416 cggagcttgtcggtagtgaagctcataccccagaagtttgtgagaacatttctcccttgt 357
Query: 816 acatcttcagcacggagcctgattttcctgtaagcttgatcctcgtcgccctgaagatca 875
| ||| || ||||| || ||||| |||||||| || || || || || | ||||||||||
Sbjct: 356 atatcctctgcacgaagtctgatcttcctgtacgcctggtcttcatcactctgaagatca 297
Query: 876 gctaggcaaacctcaaagactctgtgcttcagaccctcagaagcaatcctggtaccctgt 935
|| | | | |||||||| ||||||||||| | ||||||||| |||||| |||| ||||||
Sbjct: 296 gccaaggagacctcaaatactctgtgctttaaaccctcagatgcaatcttggtgccctgt 237
Query: 936 gtcctggatacgagagtcttcccgatgttgcgcacactgaacaccgacggtgccttgatg 995
|||||||| || || ||||| ||||||| |||||||||||| |||||||| ||||||||
Sbjct: 236 gtcctggagaccagggtcttgccgatgtcgcgcacactgaagaccgacggagccttgata 177
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
|||||||||||||| || ||| || || |||||||| |||||||| |||||||| |||
Sbjct: 176 tcataccaatcctttttgctgaacggatccacggtcttcttcttgcctcccttcttgccc 117
Query: 1056 ttggagat 1063
||||||||
Sbjct: 116 ttggagat 109
>gb|CN127730.1|CN127730 RHOH1_24_E11.g3_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_24_E11_A002 5', mRNA sequence
Length = 827
Score = 317 bits (160), Expect = 1e-084
Identities = 541/668 (80%)
Strand = Plus / Minus
Query: 396 acctccatgagcttcccaagatcgaacttgggggccttgagtatcttcaccttgcggatg 455
|||||||||||||| || | |||||||| || || || || ||||||||||||||||||
Sbjct: 770 acctccatgagctttccgatgtcgaactttggtgcttttaggatcttcaccttgcggatg 711
Query: 456 aagacgttttgaagtgggaagatgctggaggtagacttctcaatctccttaccaataact 515
||||| ||||| | ||||| ||||| ||||| | ||||| || ||||| ||||| ||
Sbjct: 710 aagacattttgcaaggggaatatgctagaggtggctttctcgatttcctttccaatgacc 651
Query: 516 tctggaatgaacttcgaaacaagttctttcaggtcacatgtagaagcctggttgatcata 575
|| || |||||||| || || ||||||||||| ||||| || ||||| |||||| ||||
Sbjct: 650 tcagggatgaacttggacacgagttctttcagatcacaagttgaagcttggttgctcatg 591
Query: 576 atctcaaccatcttacggcggatctgacggatctgggatgcctgagcatagcaggttctc 635
|| ||| |||||| || || ||||| | ||| ||| ||| ||||||||||| || | |
Sbjct: 590 atttcagtcatcttccgacgaatctgtctgatttggcttgcttgagcatagcaagtgcgc 531
Query: 636 ttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaacgcaacatgtagttg 695
|| || || || || |||||||||||||| || |||||||||| ||| | |||||||||
Sbjct: 530 ttcacttgattgggccgcctcttggtgaacccaatgcagaacagacgtagcatgtagtta 471
Query: 696 tcggttgtcttgacatcaacatgggcttcgattaatgtctgccacttcttcactagggat 755
||||| ||||||||||||||||| || || || | |||||||| |||||||| || ||
Sbjct: 470 tcggtggtcttgacatcaacatgtgcctcaataagcgtctgccatttcttcaccagtgaa 411
Query: 756 ctcagtttatcagtggtaaaattcataccccaaaagtttgtgagcacattcctgccctgc 815
| || || || || || || |||||||||| ||||||||||| ||||| || || ||
Sbjct: 410 cggagcttgtcggtagtgaagctcataccccagaagtttgtgagaacatttctcccttgt 351
Query: 816 acatcttcagcacggagcctgattttcctgtaagcttgatcctcgtcgccctgaagatca 875
| ||| || ||||| || ||||| |||||||| || || || || || | ||||||||||
Sbjct: 350 atatcctctgcacgaagtctgatcttcctgtacgcctggtcttcatcactctgaagatca 291
Query: 876 gctaggcaaacctcaaagactctgtgcttcagaccctcagaagcaatcctggtaccctgt 935
|| | | | |||||||| ||||||||||| | ||||||||| |||||| |||| ||||||
Sbjct: 290 gccaaggagacctcaaatactctgtgctttaaaccctcagatgcaatcttggtgccctgt 231
Query: 936 gtcctggatacgagagtcttcccgatgttgcgcacactgaacaccgacggtgccttgatg 995
|||||||| || || ||||| ||||||| |||||||||||| |||||||| ||||||||
Sbjct: 230 gtcctggagaccagggtcttgccgatgtcgcgcacactgaagaccgacggagccttgata 171
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
|||||||||||||| || ||| || || |||||||| |||||||| |||||||| |||
Sbjct: 170 tcataccaatcctttttgctgaacggatccacggtcttcttcttgcctcccttcttgccc 111
Query: 1056 ttggagat 1063
||||||||
Sbjct: 110 ttggagat 103
>gb|CN150657.1|CN150657 WOUND1_70_D10.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_70_D10_A002 5', mRNA sequence
Length = 823
Score = 315 bits (159), Expect = 5e-084
Identities = 566/701 (80%), Gaps = 3/701 (0%)
Strand = Plus / Minus
Query: 366 acaccaacatcctctttg---tagtcgccatgaacctccatgagcttcccaagatcgaac 422
|||||||||||||| ||| ||||| || || |||||||||||||| || | ||||||
Sbjct: 804 acaccaacatcctccttggcatagtcaccgtggacctccatgagctttccgatgtcgaac 745
Query: 423 ttgggggccttgagtatcttcaccttgcggatgaagacgttttgaagtgggaagatgctg 482
|| || || || || ||||||||||||||||||||||| ||||| | ||||| |||||
Sbjct: 744 tttggtgcttttaggatcttcaccttgcggatgaagacattttgcaaggggaatatgcta 685
Query: 483 gaggtagacttctcaatctccttaccaataacttctggaatgaacttcgaaacaagttct 542
||||| | ||||| || ||||| ||||| || || || |||||||| || || ||||||
Sbjct: 684 gaggtggctttctcgatttcctttccaatgacctcagggatgaacttggacacgagttct 625
Query: 543 ttcaggtcacatgtagaagcctggttgatcataatctcaaccatcttacggcggatctga 602
||||| ||||| || ||||| |||||| |||| || ||| |||||| || || |||||
Sbjct: 624 ttcagatcacaagttgaagcttggttgctcatgatttcagtcatcttccgacgaatctgt 565
Query: 603 cggatctgggatgcctgagcatagcaggttctcttgacctggtttgggcgcctcttggtg 662
| ||| ||| ||| ||||||||||| || | ||| || || || || ||||||||||||
Sbjct: 564 ctgatttggcttgcttgagcatagcaagtgcgcttcacttgattgggccgcctcttggtg 505
Query: 663 aagccgatgcagaacaaacgcaacatgtagttgtcggttgtcttgacatcaacatgggct 722
|| || |||||||||| ||| | ||||||||| ||||| ||||||||||||||||| ||
Sbjct: 504 aacccaatgcagaacagacgtagcatgtagttatcggtggtcttgacatcaacatgtgcc 445
Query: 723 tcgattaatgtctgccacttcttcactagggatctcagtttatcagtggtaaaattcata 782
|| || | |||||||| |||||||| || || | || || || || || || |||||
Sbjct: 444 tcaataagcgtctgccatttcttcaccagtgaacggagcttgtcggtagtgaagctcata 385
Query: 783 ccccaaaagtttgtgagcacattcctgccctgcacatcttcagcacggagcctgattttc 842
||||| ||||||||||| ||||| || || || | ||| || ||||| || ||||| |||
Sbjct: 384 ccccagaagtttgtgagaacatttctcccttgtatatcctctgcacgaagtctgatcttc 325
Query: 843 ctgtaagcttgatcctcgtcgccctgaagatcagctaggcaaacctcaaagactctgtgc 902
||||| || || || || || | |||||||||||| | | | |||||||| |||||||||
Sbjct: 324 ctgtacgcctggtcttcatcactctgaagatcagccaaggagacctcaaatactctgtgc 265
Query: 903 ttcagaccctcagaagcaatcctggtaccctgtgtcctggatacgagagtcttcccgatg 962
|| | ||||||||| |||||| |||| |||||||||||||| || || ||||| ||||||
Sbjct: 264 tttaaaccctcagatgcaatcttggtgccctgtgtcctggagaccagggtcttgccgatg 205
Query: 963 ttgcgcacactgaacaccgacggtgccttgatgtcataccaatccttcttagagaaaggg 1022
| |||||||||||| |||||||| |||||||| |||||||||||||| | ||| ||
Sbjct: 204 tcgcgcacactgaagaccgacggagccttgatatcataccaatccttttcgctgaacgga 145
Query: 1023 tcgacggtctttttcttgccacccttctttcccttggagat 1063
|| |||||||| |||||||| |||||||| |||||||||||
Sbjct: 144 tccacggtcttcttcttgcctcccttcttgcccttggagat 104
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 284,088
Number of Sequences: 832831
Number of extensions: 284088
Number of successful extensions: 75762
Number of sequences better than 0.5: 119
Number of HSP's better than 0.5 without gapping: 119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75428
Number of HSP's gapped (non-prelim): 212
length of query: 1197
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1177
effective length of database: 474,703,049
effective search space: 558725488673
effective search space used: 558725488673
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)