BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.134
(674 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AI724242.1|AI724242 RHIZ1_8_B12.y2_A001 Rhizome1 (RHIZ1)... 494 e-138
gb|CD432572.1|CD432572 ETH1_30_E04.g1_A002 Ethylene-treated... 494 e-138
gb|BE357369.1|BE357369 DG1_148_A05.g1_A002 Dark Grown 1 (DG... 492 e-137
gb|CX607748.1|CX607748 ANR1_30_B07.g1_A002 Anaerobic roots ... 486 e-135
gb|CF772707.1|CF772707 DSBF1_38_D05.g1_A010 Drought-stresse... 466 e-129
gb|CX607662.1|CX607662 ANR1_30_B07.b1_A002 Anaerobic roots ... 462 e-128
gb|CW188377.1|CW188377 104_608_11172997_148_36734_061 Sorgh... 422 e-116
gb|CW191309.1|CW191309 104_613_11178426_116_36942_075 Sorgh... 422 e-116
gb|BE592378.1|BE592378 WS1_94_A05.g1_A002 Water-stressed 1 ... 422 e-116
gb|CW317075.1|CW317075 104_808_11473223_116_35851_084 Sorgh... 416 e-114
gb|CW319235.1|CW319235 104_811_11474377_148_35884_003 Sorgh... 416 e-114
gb|CW417908.1|CW417908 fsbb001f121c05f0 Sorghum methylation... 416 e-114
gb|AW680031.1|AW680031 WS1_34_A02.g1_A002 Water-stressed 1 ... 416 e-114
gb|BE355526.1|BE355526 DG1_114_A03.g1_A002 Dark Grown 1 (DG... 416 e-114
gb|BG410872.1|BG410872 EM1_27_A01.g1_A002 Embryo 1 (EM1) So... 416 e-114
gb|CF071535.1|CF071535 FE1_17_C03.b1_A002 Iron-deficient se... 416 e-114
gb|AI724175.1|AI724175 RHIZ1_8_A04.y2_A001 Rhizome1 (RHIZ1)... 414 e-114
gb|BE355360.1|BE355360 DG1_114_A03.b1_A002 Dark Grown 1 (DG... 414 e-114
gb|CF074009.1|CF074009 FE1_9_D12.g1_A002 Iron-deficient see... 402 e-110
gb|CW306661.1|CW306661 104_792_11466961_148_35713_007 Sorgh... 400 e-110
gb|BE917707.1|BE917707 OV1_6_B04.b1_A002 Ovary 1 (OV1) Sorg... 400 e-110
gb|BG411209.1|BG411209 EM1_27_A01.b1_A002 Embryo 1 (EM1) So... 396 e-108
gb|CW128767.1|CW128767 104_510_11114194_148_34755_039 Sorgh... 394 e-108
gb|AW745446.1|AW745446 WS1_34_A02.b1_A002 Water-stressed 1 ... 394 e-108
gb|BG240440.1|BG240440 OV1_30_A12.b1_A002 Ovary 1 (OV1) Sor... 394 e-108
gb|AI724884.1|AI724884 RHIZ1_30_G03.y3_A001 Rhizome1 (RHIZ1... 392 e-107
gb|BZ341857.1|BZ341857 ic79b05.g1 WGS-SbicolorF (JM107 adap... 391 e-107
gb|CL152064.1|CL152064 104_335_10779694_116_31364_094 Sorgh... 391 e-107
gb|CW155043.1|CW155043 104_557_11145924_116_36362_042 Sorgh... 391 e-107
gb|CW155044.1|CW155044 104_557_11145924_148_36361_042 Sorgh... 391 e-107
gb|BF480763.1|BF480763 FM1_14_F11.g1_A003 Floral-Induced Me... 391 e-107
gb|BG049096.1|BG049096 OV1_23_C04.g1_A002 Ovary 1 (OV1) Sor... 391 e-107
gb|CD213618.1|CD213618 HS1_52_G12.b1_A012 Heat-shocked seed... 391 e-107
gb|CD213713.1|CD213713 HS1_52_G12.g1_A012 Heat-shocked seed... 391 e-107
gb|CD462726.1|CD462726 ETH1_39_B03.g1_A002 Ethylene-treated... 391 e-107
gb|CX606979.1|CX606979 ANR1_6_B05.b1_A002 Anaerobic roots S... 391 e-107
gb|CX607063.1|CX607063 ANR1_6_B05.g1_A002 Anaerobic roots S... 391 e-107
gb|CX610420.1|CX610420 ANR1_18_D02.g1_A002 Anaerobic roots ... 391 e-107
gb|CW088567.1|CW088567 104_433_10948227_116_32575_006 Sorgh... 389 e-106
gb|AI723845.1|AI723845 RHIZ1_28_B06.y1_A001 Rhizome1 (RHIZ1... 387 e-105
gb|BG488106.1|BG488106 RHIZ2_63_D10.g1_A003 Rhizome2 (RHIZ2... 387 e-105
gb|BG488416.1|BG488416 RHIZ2_63_D10.b1_A003 Rhizome2 (RHIZ2... 387 e-105
gb|CW129063.1|CW129063 104_511_11114353_148_34760_015 Sorgh... 385 e-105
gb|CW297850.1|CW297850 104_780_11462260_116_35647_012 Sorgh... 385 e-105
gb|BG052252.1|BG052252 RHIZ2_12_B05.g1_A003 Rhizome2 (RHIZ2... 385 e-105
gb|BG102543.1|BG102543 RHIZ2_34_D04.g1_A003 Rhizome2 (RHIZ2... 385 e-105
gb|CW410848.1|CW410848 fsbb001f105m09k0 Sorghum methylation... 383 e-104
gb|BE917630.1|BE917630 OV1_6_B04.g1_A002 Ovary 1 (OV1) Sorg... 379 e-103
gb|BF480894.1|BF480894 FM1_14_F11.b1_A003 Floral-Induced Me... 379 e-103
gb|CW410847.1|CW410847 fsbb001f105m09f0 Sorghum methylation... 377 e-103
gb|BF481909.1|BF481909 FM1_22_H04.g1_A003 Floral-Induced Me... 375 e-102
gb|BF656458.1|BF656458 FM1_50_B08.g1_A003 Floral-Induced Me... 375 e-102
gb|BF704683.1|BF704683 FM1_50_B08.b1_A003 Floral-Induced Me... 375 e-102
gb|CF431776.1|CF431776 NIT1_9_B03.b1_A002 Nitrogen-deficien... 375 e-102
gb|CW361905.1|CW361905 fsbb001f030l13f0 Sorghum methylation... 373 e-101
gb|CW182557.1|CW182557 104_598_11164141_116_36663_061 Sorgh... 367 e-100
gb|AW564395.1|AW564395 LG1_292_F12.b1_A002 Light Grown 1 (L... 367 e-100
gb|BE593143.1|BE593143 WS1_98_A10.g1_A002 Water-stressed 1 ... 367 e-100
gb|CD431873.1|CD431873 ETH1_11_A02.g1_A002 Ethylene-treated... 367 e-100
gb|CN150853.1|CN150853 WOUND1_71_G11.g1_A002 Wounded leaves... 367 e-100
gb|BG049237.1|BG049237 OV1_17_D01.g1_A002 Ovary 1 (OV1) Sor... 365 3e-099
gb|CF071274.1|CF071274 FE1_16_D02.g1_A002 Iron-deficient se... 365 3e-099
gb|CW183462.1|CW183462 104_599_11164629_148_36672_089 Sorgh... 361 5e-098
gb|BE599367.1|BE599367 PI1_88_F07.g1_A002 Pathogen induced ... 361 5e-098
gb|CD464058.1|CD464058 ETH1_48_H05.b1_A002 Ethylene-treated... 361 5e-098
gb|CN125957.1|CN125957 RHOH1_14_H01.b1_A002 Acid- and alkal... 359 2e-097
gb|CN126047.1|CN126047 RHOH1_14_H01.g1_A002 Acid- and alkal... 359 2e-097
gb|CX608442.1|CX608442 ANR1_38_D08.g1_A002 Anaerobic roots ... 359 2e-097
gb|CF072752.1|CF072752 FE1_25_E07.g1_A002 Iron-deficient se... 357 9e-097
gb|CW112587.1|CW112587 104_486_11104970_116_34548_007 Sorgh... 353 1e-095
gb|BE593453.1|BE593453 WS1_98_A10.b1_A002 Water-stressed 1 ... 351 5e-095
gb|CF484983.1|CF484983 POL1_28_F02.g1_A002 Pollen Sorghum b... 341 5e-092
gb|BE355445.1|BE355445 DG1_114_A03.b2_A002 Dark Grown 1 (DG... 331 5e-089
gb|CW191310.1|CW191310 104_613_11178426_148_36941_075 Sorgh... 329 2e-088
gb|BE599532.1|BE599532 PI1_88_F07.b1_A002 Pathogen induced ... 329 2e-088
gb|CW105327.1|CW105327 104_474_11012845_116_34450_053 Sorgh... 319 2e-085
gb|CW394994.1|CW394994 fsbb001f082n15f0 Sorghum methylation... 319 2e-085
gb|CW463246.1|CW463246 fsbb001f211m02f0 Sorghum methylation... 317 7e-085
gb|BE592516.1|BE592516 WS1_94_A05.b1_A002 Water-stressed 1 ... 317 7e-085
gb|CF431835.1|CF431835 NIT1_9_B03.g1_A002 Nitrogen-deficien... 309 2e-082
gb|AW286565.1|AW286565 LG1_334_E01.g1_A002 Light Grown 1 (L... 307 7e-082
gb|BF482021.1|BF482021 FM1_22_H04.b1_A003 Floral-Induced Me... 295 3e-078
gb|CN150769.1|CN150769 WOUND1_71_G11.b1_A002 Wounded leaves... 291 4e-077
gb|CL159717.1|CL159717 104_349_10804465_114_31381_289 Sorgh... 281 4e-074
gb|CW306660.1|CW306660 104_792_11466961_116_35709_007 Sorgh... 281 4e-074
gb|CW182558.1|CW182558 104_598_11164141_148_36664_061 Sorgh... 280 2e-073
gb|CW432220.1|CW432220 fsbb001f146m24f0 Sorghum methylation... 280 2e-073
gb|CW088569.1|CW088569 104_433_10948227_251_32621_006 Sorgh... 274 1e-071
gb|CW156116.1|CW156116 104_558_11146509_148_36368_081 Sorgh... 238 5e-061
gb|CW105328.1|CW105328 104_474_11012845_148_34446_053 Sorgh... 230 1e-058
gb|BG240054.1|BG240054 OV1_17_D01.b1_A002 Ovary 1 (OV1) Sor... 212 3e-053
gb|CW394995.1|CW394995 fsbb001f082n15k0 Sorghum methylation... 204 8e-051
gb|BF656582.1|BF656582 FM1_51_H04.g1_A003 Floral-Induced Me... 204 8e-051
gb|BG048803.1|BG048803 OV1_23_C04.b1_A002 Ovary 1 (OV1) Sor... 204 8e-051
gb|CW490111.1|CW490111 fsbb001f275g08k0 Sorghum methylation... 200 1e-049
gb|CW070741.1|CW070741 104_322_10590964_114_30544 Sorghum m... 192 3e-047
gb|BG052312.1|BG052312 RHIZ2_12_B05.b1_A003 Rhizome2 (RHIZ2... 192 3e-047
gb|BG102866.1|BG102866 RHIZ2_34_D04.b1_A003 Rhizome2 (RHIZ2... 192 3e-047
gb|CF430869.1|CF430869 NIT1_1_E01.b1_A002 Nitrogen-deficien... 190 1e-046
gb|BF704815.1|BF704815 FM1_51_H04.b1_A003 Floral-Induced Me... 186 2e-045
gb|BG558204.1|BG558204 RHIZ2_64_D04.b1_A003 Rhizome2 (RHIZ2... 186 2e-045
gb|CW104944.1|CW104944 104_474_11012677_148_34448_061 Sorgh... 182 3e-044
gb|BG560769.1|BG560769 RHIZ2_64_D04.g1_A003 Rhizome2 (RHIZ2... 178 4e-043
gb|CW415400.1|CW415400 fsbb001f115h21f0 Sorghum methylation... 176 2e-042
gb|AI723852.1|AI723852 RHIZ1_28_C06.y1_A001 Rhizome1 (RHIZ1... 163 3e-038
gb|CW424980.1|CW424980 fsbb001f135j06f0 Sorghum methylation... 157 2e-036
gb|BE353104.1|BE353104 DG1_4_H07.g1_A002 Dark Grown 1 (DG1)... 141 9e-032
gb|CW227263.1|CW227263 104_665_11205321_148_37224_037 Sorgh... 129 4e-028
gb|CW113300.1|CW113300 104_487_11105369_148_34551_071 Sorgh... 127 1e-027
gb|AW677105.1|AW677105 DG1_4_H07.b1_A002 Dark Grown 1 (DG1)... 113 2e-023
gb|CW104943.1|CW104943 104_474_11012677_116_34452_061 Sorgh... 107 1e-021
gb|AI724525.1|AI724525 RHIZ1_37_E01.y1_A001 Rhizome1 (RHIZ1... 107 1e-021
gb|BE357302.1|BE357302 DG1_148_A05.b1_A002 Dark Grown 1 (DG... 94 2e-017
gb|CD431850.1|CD431850 ETH1_11_D10.g1_A002 Ethylene-treated... 94 2e-017
gb|BE358231.1|BE358231 DG1_26_E04.b2_A002 Dark Grown 1 (DG1... 84 2e-014
gb|CW415401.1|CW415401 fsbb001f115h21k0 Sorghum methylation... 78 1e-012
gb|CL152063.1|CL152063 104_335_10779694_114_31363_094 Sorgh... 72 7e-011
gb|CW070742.1|CW070742 104_322_10590964_116_30543 Sorghum m... 72 7e-011
gb|CW238284.1|CW238284 104_695_11216646_148_37417_029 Sorgh... 70 3e-010
gb|CW088568.1|CW088568 104_433_10948227_250_32620_006 Sorgh... 68 1e-009
gb|CW049116.1|CW049116 104_288_10513836_114_30200 Sorghum m... 64 2e-008
gb|CW088566.1|CW088566 104_433_10948227_114_32572_006 Sorgh... 64 2e-008
gb|CW344083.1|CW344083 104_846_11487770_116_36196_005 Sorgh... 64 2e-008
gb|CW105329.1|CW105329 104_474_11012845_148_34479_053 Sorgh... 58 1e-006
gb|CW317076.1|CW317076 104_808_11473223_148_35855_084 Sorgh... 56 4e-006
gb|CW424981.1|CW424981 fsbb001f135j06k0 Sorghum methylation... 56 4e-006
gb|BE358843.1|BE358843 DG1_32_D03.g1_A002 Dark Grown 1 (DG1... 56 4e-006
gb|CF434162.1|CF434162 NIT1_32_H03.g1_A002 Nitrogen-deficie... 56 4e-006
gb|CW314974.1|CW314974 104_805_11472113_116_35877_065 Sorgh... 44 0.016
gb|CD212479.1|CD212479 HS1_5_C01.g1_A012 Heat-shocked seedl... 44 0.016
gb|CN133945.1|CN133945 OX1_19_F11.b1_A002 Oxidatively-stres... 44 0.016
gb|CN134030.1|CN134030 OX1_19_F11.g1_A002 Oxidatively-stres... 44 0.016
gb|CL170389.1|CL170389 104_371_10813777_116_31791_097 Sorgh... 40 0.26
gb|CL186013.1|CL186013 104_400_10899928_116_32405_056 Sorgh... 40 0.26
gb|CW026197.1|CW026197 104_252_10497812_114_30513 Sorghum m... 40 0.26
gb|CW233439.1|CW233439 104_686_11213422_116_37376_085 Sorgh... 40 0.26
gb|CW247875.1|CW247875 104_709_11221996_116_35032_016 Sorgh... 40 0.26
gb|CW247876.1|CW247876 104_709_11221996_148_35028_016 Sorgh... 40 0.26
gb|CW250677.1|CW250677 104_713_11223520_148_35059_064 Sorgh... 40 0.26
gb|CW252274.1|CW252274 104_715_11224407_116_35096_060 Sorgh... 40 0.26
gb|CW278768.1|CW278768 104_753_11406722_116_35426_009 Sorgh... 40 0.26
gb|CW333757.1|CW333757 104_832_11482134_116_36058_031 Sorgh... 40 0.26
gb|CW333758.1|CW333758 104_832_11482134_148_36057_031 Sorgh... 40 0.26
gb|CW408451.1|CW408451 fsbb001f102f15f0 Sorghum methylation... 40 0.26
gb|CW430318.1|CW430318 fsbb001f143p12k0 Sorghum methylation... 40 0.26
gb|CW473767.1|CW473767 fsbb001f229e18f0 Sorghum methylation... 40 0.26
gb|BE600943.1|BE600943 PI1_95_A11.b1_A002 Pathogen induced ... 40 0.26
gb|BG649739.1|BG649739 RHIZ2_83_A06.b1_A003 Rhizome2 (RHIZ2... 40 0.26
gb|AF466200.2| Sorghum bicolor putative protein kinase gene... 40 0.26
>gb|AI724242.1|AI724242 RHIZ1_8_B12.y2_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 448
Score = 494 bits (249), Expect = e-138
Identities = 351/383 (91%), Gaps = 4/383 (1%)
Strand = Plus / Minus
Query: 60 tcattcagcaattataacaaattctacattgttgcacgaacaacctagcacaggcctaa- 118
|||||||||| || ||||||||||||| |||| ||||| |||||||||| |||||||
Sbjct: 400 tcattcagcagatacaacaaattctacactgtttcacgaggaacctagcactggcctaaa 341
Query: 119 -atatgag--aattaaacaggatcgtagcaacgtgcggcggcaccctaagaggatgtaaa 175
| | ||| || ||||| || ||||| | ||| | || ||| ||||||| || |||||
Sbjct: 340 cacacgaggaaacgaaacatgaccgtagaaccgtacagcagcaacctaagatgaagtaaa 281
Query: 176 cttggtaaccgccttggtcccttcggatacggcgtgcttggcgagctcgccggggaggac 235
|||||||||||||||||| || || || |||||||||||||||||||||||||| |||||
Sbjct: 280 cttggtaaccgccttggtgccctcagagacggcgtgcttggcgagctcgccgggaaggac 221
Query: 236 gaggcgcaccgaggtctggatctcccgggaggtgatggtgggcttcttgttgtagcgggc 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 gaggcgcaccgaggtctggatctcccgggaggtgatggtgggcttcttgttgtagcgggc 161
Query: 296 gagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttcatgat 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 gagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttcatgat 101
Query: 356 ggacatggccttggacgagatgccaatgtccgggtgcacctgcttgagcaccttgaagat 415
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 100 ggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaagat 41
Query: 416 gtagatcttgtacgtctcgacgc 438
|||||||||||||||||||||||
Sbjct: 40 gtagatcttgtacgtctcgacgc 18
>gb|CD432572.1|CD432572 ETH1_30_E04.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_30_E04_A002 5', mRNA sequence
Length = 667
Score = 494 bits (249), Expect = e-138
Identities = 351/383 (91%), Gaps = 4/383 (1%)
Strand = Plus / Minus
Query: 60 tcattcagcaattataacaaattctacattgttgcacgaacaacctagcacaggcctaa- 118
|||||||||| || ||||||||||||| |||| ||||| | ||| ||||| |||||||
Sbjct: 618 tcattcagcagatacaacaaattctacactgtttcacgagcgacccagcactggcctaaa 559
Query: 119 -atatgag--aattaaacaggatcgtagcaacgtgcggcggcaccctaagaggatgtaaa 175
| | ||| || ||||| || ||||||| | ||| |||||| |||||||||| |||||
Sbjct: 558 cacacgaggaaacgaaacaagaccgtagcaccatgcagcggcagcctaagaggaagtaaa 499
Query: 176 cttggtaaccgccttggtcccttcggatacggcgtgcttggcgagctcgccggggaggac 235
||||||||| |||||||| || ||||| |||||||||||||||||||||||||| |||||
Sbjct: 498 cttggtaacagccttggtgccctcggagacggcgtgcttggcgagctcgccgggaaggac 439
Query: 236 gaggcgcaccgaggtctggatctcccgggaggtgatggtgggcttcttgttgtagcgggc 295
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gaggcgcaccgacgtctggatctcccgggaggtgatggtgggcttcttgttgtagcgggc 379
Query: 296 gagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttcatgat 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttcatgat 319
Query: 356 ggacatggccttggacgagatgccaatgtccgggtgcacctgcttgagcaccttgaagat 415
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ggacatggccttggaggagataccaatgtccgggtgcacctgcttgagcaccttgaagat 259
Query: 416 gtagatcttgtacgtctcgacgc 438
|||||||||||||||||||||||
Sbjct: 258 gtagatcttgtacgtctcgacgc 236
Score = 222 bits (112), Expect = 3e-056
Identities = 176/196 (89%), Gaps = 1/196 (0%)
Strand = Plus / Minus
Query: 469 cgccgccctccttgctcggcacgcgcttctccgcccttggcttcttctcggccttctcct 528
||||||||||||||| || ||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 205 cgccgccctccttgccggggacgcgtttctccgccctgggcttcttctcggccttctcct 146
Query: 529 ccgccggcttcttctccgcgggcttcttctcggccttgggcgccatcaggaatcgatcaa 588
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 145 ccgccggcttcttctccgcgggcttcttctcggccttgggcgccatcagtaatcgatcaa 86
Query: 589 atggggc-gcgaaagagatgggggaaggggcggcttgggaatttgctggtgagtggcggc 647
|||| || ||||| | || | |||||| ||||| ||| ||||||||||||| | ||||||
Sbjct: 85 atggagcggcgaacgcgaggtgggaagcggcggattgcgaatttgctggtgggaggcggc 26
Query: 648 gagtgttcgtagcttt 663
|||| |||| |||||
Sbjct: 25 aagtgctcgtggcttt 10
>gb|BE357369.1|BE357369 DG1_148_A05.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 616
Score = 492 bits (248), Expect = e-137
Identities = 287/300 (95%)
Strand = Plus / Minus
Query: 139 cgtagcaacgtgcggcggcaccctaagaggatgtaaacttggtaaccgccttggtccctt 198
||||||| | ||| |||||| |||||||||| |||||||||||||| |||||||| || |
Sbjct: 524 cgtagcaccatgcagcggcagcctaagaggaagtaaacttggtaacagccttggtgccct 465
Query: 199 cggatacggcgtgcttggcgagctcgccggggaggacgaggcgcaccgaggtctggatct 258
|||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 464 cggagacggcgtgcttggcgagctcgccgggaaggacgaggcgcaccgacgtctggatct 405
Query: 259 cccgggaggtgatggtgggcttcttgttgtagcgggcgagcttggcggcctcggcggcga 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 cccgggaggtgatggtgggcttcttgttgtagcgggcgagcttggcggcctcggcggcga 345
Query: 319 gcttctcgaagatgtcgttgatgaaggagttcatgatggacatggccttggacgagatgc 378
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 344 gcttctcgaagatgtcgttgatgaaggagttcatgatggacatggccttggaggagatac 285
Query: 379 caatgtccgggtgcacctgcttgagcaccttgaagatgtagatcttgtacgtctcgacgc 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 caatgtccgggtgcacctgcttgagcaccttgaagatgtagatcttgtacgtctcgacgc 225
Score = 216 bits (109), Expect = 2e-054
Identities = 167/185 (90%), Gaps = 1/185 (0%)
Strand = Plus / Minus
Query: 469 cgccgccctccttgctcggcacgcgcttctccgcccttggcttcttctcggccttctcct 528
||||||||||||||| || ||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 194 cgccgccctccttgccggggacgcgtttctccgccctgggcttcttctcggccttctcct 135
Query: 529 ccgccggcttcttctccgcgggcttcttctcggccttgggcgccatcaggaatcgatcaa 588
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 134 ccgccggcttcttctccgcgggcttcttctcggccttgggcgccatcagtaatcgatcaa 75
Query: 589 atggggc-gcgaaagagatgggggaaggggcggcttgggaatttgctggtgagtggcggc 647
|||| || ||||| | || | |||||| ||||| ||| ||||||||||||| | ||||||
Sbjct: 74 atggagcggcgaacgcgaggtgggaagcggcggattgcgaatttgctggtgggaggcggc 15
Query: 648 gagtg 652
||||
Sbjct: 14 aagtg 10
>gb|CX607748.1|CX607748 ANR1_30_B07.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_30_B07_A002 5', mRNA sequence
Length = 644
Score = 486 bits (245), Expect = e-135
Identities = 293/309 (94%)
Strand = Plus / Minus
Query: 130 aaacaggatcgtagcaacgtgcggcggcaccctaagaggatgtaaacttggtaaccgcct 189
||||| || ||||||| | ||| |||||| |||||||||| |||||||||||||| ||||
Sbjct: 540 aaacaagaccgtagcaccatgcagcggcagcctaagaggaagtaaacttggtaacagcct 481
Query: 190 tggtcccttcggatacggcgtgcttggcgagctcgccggggaggacgaggcgcaccgagg 249
|||| || ||||| |||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 480 tggtgccctcggagacggcgtgcttggcgagctcgccgggaaggacgaggcgcaccgacg 421
Query: 250 tctggatctcccgggaggtgatggtgggcttcttgttgtagcgggcgagcttggcggcct 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tctggatctcccgggaggtgatggtgggcttcttgttgtagcgggcgagcttggcggcct 361
Query: 310 cggcggcgagcttctcgaagatgtcgttgatgaaggagttcatgatggacatggccttgg 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 360 cggcggcgagcttctcgaagatgtcgttgatgaaggagttcatgatggacatggcctcgg 301
Query: 370 acgagatgccaatgtccgggtgcacctgcttgagcaccttgaagatgtagatcttgtacg 429
| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 aggagataccaatgtccgggtgcacctgcttgagcaccttgaagatgtagatcttgtacg 241
Query: 430 tctcgacgc 438
|||||||||
Sbjct: 240 tctcgacgc 232
Score = 218 bits (110), Expect = 5e-055
Identities = 171/190 (90%), Gaps = 1/190 (0%)
Strand = Plus / Minus
Query: 469 cgccgccctccttgctcggcacgcgcttctccgcccttggcttcttctcggccttctcct 528
||||||||||||||| || ||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 201 cgccgccctccttgccggggacgcgtttctccgccctgggcttcttctcggccttctcct 142
Query: 529 ccgccggcttcttctccgcgggcttcttctcggccttgggcgccatcaggaatcgatcaa 588
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 141 ccgccggcttcttctccgcgggcttcttctcggccttgggcgccatcagtaatcgatcaa 82
Query: 589 atggggc-gcgaaagagatgggggaaggggcggcttgggaatttgctggtgagtggcggc 647
|||| || ||||| | || | |||||| ||||| ||| ||||||||||||| | ||||||
Sbjct: 81 atggagcggcgaacgcgaggtgggaagcggcggattgcgaatttgctggtgggaggcggc 22
Query: 648 gagtgttcgt 657
|||| ||||
Sbjct: 21 aagtgctcgt 12
Score = 48.1 bits (24), Expect = 0.001
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 60 tcattcagcaattataacaaattctacattgttgcacgaacaacctagcacaggcctaaa 119
|||||||||| || ||||||||||||| |||| ||||| | ||| ||||| ||||||||
Sbjct: 614 tcattcagcagatacaacaaattctacactgtttcacgagcgacccagcactggcctaaa 555
>gb|CF772707.1|CF772707 DSBF1_38_D05.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_38_D05_A010 3', mRNA sequence
Length = 420
Score = 466 bits (235), Expect = e-129
Identities = 316/341 (92%), Gaps = 4/341 (1%)
Strand = Plus / Minus
Query: 75 aacaaattctacattgttgcacgaacaacctagcacaggcctaaatat--gag--aatta 130
||||||||||||| |||| ||||| ||||||||||| |||||||| | ||| || |
Sbjct: 341 aacaaattctacactgtttcacgagcaacctagcactggcctaaacacacgaggaaacga 282
Query: 131 aacaggatcgtagcaacgtgcggcggcaccctaagaggatgtaaacttggtaaccgcctt 190
|||| || ||||||| ||||| || ||| |||||||||| |||||||||||||| |||||
Sbjct: 281 aacaagaccgtagcaccgtgcagcagcaacctaagaggaagtaaacttggtaacagcctt 222
Query: 191 ggtcccttcggatacggcgtgcttggcgagctcgccggggaggacgaggcgcaccgaggt 250
||| || ||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 221 ggtgccctcggaaacggcgtgcttggcgagctcgccgggaaggacgaggcgcaccgaggt 162
Query: 251 ctggatctcccgggaggtgatggtgggcttcttgttgtagcgggcgagcttggcggcctc 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 ctggatctcccgggaggtgatggtgggcttcttgttgtagcgggcgagcttggcggcctc 102
Query: 311 ggcggcgagcttctcgaagatgtcgttgatgaaggagttcatgatggacatggccttgga 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 ggcggcgagcttctcgaagatgtcgttgatgaaggagttcatgatggacatggccttgga 42
Query: 371 cgagatgccaatgtccgggtgcacctgcttgagcaccttga 411
|||||| ||||||||||||||||||||||||||||||||||
Sbjct: 41 cgagataccaatgtccgggtgcacctgcttgagcaccttga 1
>gb|CX607662.1|CX607662 ANR1_30_B07.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_30_B07_A002 3', mRNA sequence
Length = 607
Score = 462 bits (233), Expect = e-128
Identities = 290/309 (93%)
Strand = Plus / Minus
Query: 130 aaacaggatcgtagcaacgtgcggcggcaccctaagaggatgtaaacttggtaaccgcct 189
||||| || ||||||| | ||| |||||| |||||||||| |||||||||||||| ||||
Sbjct: 470 aaacaagaccgtagcaccatgcagcggcagcctaagaggaagtaaacttggtaacagcct 411
Query: 190 tggtcccttcggatacggcgtgcttggcgagctcgccggggaggacgaggcgcaccgagg 249
|||| || ||||| |||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 410 tggtgccctcggaaacggcgtgcttggcgagctcgccgggaaggacgaggcgcaccgacg 351
Query: 250 tctggatctcccgggaggtgatggtgggcttcttgttgtagcgggcgagcttggcggcct 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tctggatctcccgggaggtgatggtgggcttcttgttgtagcgggcgagcttggcggcct 291
Query: 310 cggcggcgagcttctcgaagatgtcgttgatgaaggagttcatgatggacatggccttgg 369
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 cggcggcgagcttctcgaaaatgtcgttgatgaaggagttcatgatggacatggccttgg 231
Query: 370 acgagatgccaatgtccgggtgcacctgcttgagcaccttgaagatgtagatcttgtacg 429
| || || ||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 230 aggaaataccaatgtccgggtgcacctgcttgagcaccttgaaaatgtaaatcttgtacg 171
Query: 430 tctcgacgc 438
|||||||||
Sbjct: 170 tctcgacgc 162
Score = 198 bits (100), Expect = 5e-049
Identities = 118/124 (95%)
Strand = Plus / Minus
Query: 469 cgccgccctccttgctcggcacgcgcttctccgcccttggcttcttctcggccttctcct 528
||||||||||||||| || ||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 131 cgccgccctccttgccggggacgcgtttctccgccctgggcttcttctcggccttctcct 72
Query: 529 ccgccggcttcttctccgcgggcttcttctcggccttgggcgccatcaggaatcgatcaa 588
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 71 ccgccggcttcttctccgcgggcttcttctcggccttgggcgccatcagtaatcgatcaa 12
Query: 589 atgg 592
||||
Sbjct: 11 atgg 8
Score = 56.0 bits (28), Expect = 4e-006
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 60 tcattcagcaattataacaaattctacattgttgcacgaacaacctagcacaggcctaaa 119
||||||||||| || ||||||||||||| |||| ||||| | ||| ||||| ||||||||
Sbjct: 544 tcattcagcaaatacaacaaattctacactgtttcacgagcgacccagcactggcctaaa 485
>gb|CW188377.1|CW188377 104_608_11172997_148_36734_061 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11172997, DNA
sequence
Length = 707
Score = 422 bits (213), Expect = e-116
Identities = 258/273 (94%)
Strand = Plus / Minus
Query: 161 ctaagaggatgtaaacttggtaaccgccttggtcccttcggatacggcgtgcttggcgag 220
|||||| || || |||||||| || |||||||| || ||||| |||||||||||||||||
Sbjct: 556 ctaagatgaggtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgag 497
Query: 221 ctcgccggggaggacgaggcgcaccgaggtctggatctcccgggaggtgatggtgggctt 280
||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 496 ctcgccggggaggacgaggcgcaccgacgtctggatctccctggaggtgatggtgggctt 437
Query: 281 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 340
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 cttgttgtagcgcgcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 377
Query: 341 gaaggagttcatgatggacatggccttggacgagatgccaatgtccgggtgcacctgctt 400
|||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||
Sbjct: 376 gaaggagttcatgatggacatggccttggaggagatgccgatgtcagggtgcacctgctt 317
Query: 401 gagcaccttgaagatgtagatcttgtacgtctc 433
||||||||||||||||||||||||||| |||||
Sbjct: 316 gagcaccttgaagatgtagatcttgtaggtctc 284
Score = 56.0 bits (28), Expect = 4e-006
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 524 ctcctccgccggcttcttctccgcgggcttcttctcggccttgggcgccatc 575
|||| |||| ||||||||| |||| ||||||||||| |||||||| ||||||
Sbjct: 154 ctccgccgcgggcttcttcgccgccggcttcttctccgccttgggagccatc 103
>gb|CW191309.1|CW191309 104_613_11178426_116_36942_075 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11178426, DNA
sequence
Length = 724
Score = 422 bits (213), Expect = e-116
Identities = 258/273 (94%)
Strand = Plus / Minus
Query: 161 ctaagaggatgtaaacttggtaaccgccttggtcccttcggatacggcgtgcttggcgag 220
|||||| || || ||||||||||| |||||||| || ||||| |||||||||||||||||
Sbjct: 612 ctaagatgaggtgaacttggtaacggccttggtgccctcggacacggcgtgcttggcgag 553
Query: 221 ctcgccggggaggacgaggcgcaccgaggtctggatctcccgggaggtgatggtgggctt 280
|||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 552 ctcgcctgggaggacgaggcgcaccgacgtctggatctccctggaggtgatggtgggctt 493
Query: 281 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 340
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 492 cttgttgtagcgggcgagcttggcggcctcgccggcgagcttctcgaagatgtcgttgat 433
Query: 341 gaaggagttcatgatggacatggccttggacgagatgccaatgtccgggtgcacctgctt 400
|||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||
Sbjct: 432 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtgcacctgctt 373
Query: 401 gagcaccttgaagatgtagatcttgtacgtctc 433
||||||||||||||||||||||||||| |||||
Sbjct: 372 gagcaccttgaagatgtagatcttgtaggtctc 340
Score = 71.9 bits (36), Expect = 7e-011
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 524 ctcctccgccggcttcttctccgcgggcttcttctcggccttgggcgccatc 575
||||||||| ||||||||| |||| ||||||||||| |||||||||||||||
Sbjct: 213 ctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccatc 162
Score = 40.1 bits (20), Expect = 0.26
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 518 ggccttctcctccgccggcttcttctccgcgggcttcttc 557
||||||||| |||| |||| || ||||||||||||||||
Sbjct: 234 ggccttctcggccgcgggctcctcctccgcgggcttcttc 195
>gb|BE592378.1|BE592378 WS1_94_A05.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 464
Score = 422 bits (213), Expect = e-116
Identities = 258/273 (94%)
Strand = Plus / Minus
Query: 161 ctaagaggatgtaaacttggtaaccgccttggtcccttcggatacggcgtgcttggcgag 220
|||||| || || ||||||||||| |||||||| || ||||| |||||||||||||||||
Sbjct: 313 ctaagatgaggtgaacttggtaacggccttggtgccctcggacacggcgtgcttggcgag 254
Query: 221 ctcgccggggaggacgaggcgcaccgaggtctggatctcccgggaggtgatggtgggctt 280
|||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 253 ctcgcctgggaggacgaggcgcaccgacgtctggatctccctggaggtgatggtgggctt 194
Query: 281 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 340
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 193 cttgttgtagcgggcgagcttggcggcctcgccggcgagcttctcgaagatgtcgttgat 134
Query: 341 gaaggagttcatgatggacatggccttggacgagatgccaatgtccgggtgcacctgctt 400
|||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||
Sbjct: 133 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtgcacctgctt 74
Query: 401 gagcaccttgaagatgtagatcttgtacgtctc 433
||||||||||||||||||||||||||| |||||
Sbjct: 73 gagcaccttgaagatgtagatcttgtaggtctc 41
>gb|CW317075.1|CW317075 104_808_11473223_116_35851_084 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11473223, DNA
sequence
Length = 600
Score = 416 bits (210), Expect = e-114
Identities = 258/274 (94%)
Strand = Plus / Plus
Query: 160 cctaagaggatgtaaacttggtaaccgccttggtcccttcggatacggcgtgcttggcga 219
||||||| || || |||||||| || |||||||| || ||||| ||||||||||||||||
Sbjct: 315 cctaagaagaggtgaacttggtgacagccttggtgccctcggagacggcgtgcttggcga 374
Query: 220 gctcgccggggaggacgaggcgcaccgaggtctggatctcccgggaggtgatggtgggct 279
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 375 gctcgccggggaggacgaggcgcaccgaggtctggatctcgcgggaggtgatggtgggct 434
Query: 280 tcttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttga 339
||||||||||||| || |||||||||| |||||| || ||||||||||||||||||||||
Sbjct: 435 tcttgttgtagcgcgccagcttggcggactcggccgcaagcttctcgaagatgtcgttga 494
Query: 340 tgaaggagttcatgatggacatggccttggacgagatgccaatgtccgggtgcacctgct 399
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 495 tgaaggagttcatgatggacatggccttggacgagatgccgatgtccgggtgcacctgct 554
Query: 400 tgagcaccttgaagatgtagatcttgtacgtctc 433
|||||||||||||||||||||||||||| |||||
Sbjct: 555 tgagcaccttgaagatgtagatcttgtaggtctc 588
>gb|CW319235.1|CW319235 104_811_11474377_148_35884_003 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11474377, DNA
sequence
Length = 704
Score = 416 bits (210), Expect = e-114
Identities = 258/274 (94%)
Strand = Plus / Minus
Query: 160 cctaagaggatgtaaacttggtaaccgccttggtcccttcggatacggcgtgcttggcga 219
||||||| || || |||||||| || |||||||| || ||||| ||||||||||||||||
Sbjct: 607 cctaagaagaggtgaacttggtgacagccttggtgccctcggagacggcgtgcttggcga 548
Query: 220 gctcgccggggaggacgaggcgcaccgaggtctggatctcccgggaggtgatggtgggct 279
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 547 gctcgccggggaggacgaggcgcaccgaggtctggatctcgcgggaggtgatggtgggct 488
Query: 280 tcttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttga 339
||||||||||||| || |||||||||| |||||| || ||||||||||||||||||||||
Sbjct: 487 tcttgttgtagcgcgccagcttggcggactcggccgcaagcttctcgaagatgtcgttga 428
Query: 340 tgaaggagttcatgatggacatggccttggacgagatgccaatgtccgggtgcacctgct 399
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 427 tgaaggagttcatgatggacatggccttggacgagatgccgatgtccgggtgcacctgct 368
Query: 400 tgagcaccttgaagatgtagatcttgtacgtctc 433
|||||||||||||||||||||||||||| |||||
Sbjct: 367 tgagcaccttgaagatgtagatcttgtaggtctc 334
Score = 63.9 bits (32), Expect = 2e-008
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 524 ctcctccgccggcttcttctccgcgggcttcttctcggccttgggcgccatc 575
||||||||| ||||||||| |||| ||||||||||| |||||||| ||||||
Sbjct: 195 ctcctccgcgggcttcttcgccgccggcttcttctccgccttgggtgccatc 144
>gb|CW417908.1|CW417908 fsbb001f121c05f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f121c05, DNA
sequence
Length = 812
Score = 416 bits (210), Expect = e-114
Identities = 258/274 (94%)
Strand = Plus / Minus
Query: 160 cctaagaggatgtaaacttggtaaccgccttggtcccttcggatacggcgtgcttggcga 219
||||||| || || |||||||| || |||||||| || ||||| ||||||||||||||||
Sbjct: 557 cctaagaagaggtgaacttggtgacagccttggtgccctcggagacggcgtgcttggcga 498
Query: 220 gctcgccggggaggacgaggcgcaccgaggtctggatctcccgggaggtgatggtgggct 279
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 497 gctcgccggggaggacgaggcgcaccgaggtctggatctcgcgggaggtgatggtgggct 438
Query: 280 tcttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttga 339
||||||||||||| || |||||||||| |||||| || ||||||||||||||||||||||
Sbjct: 437 tcttgttgtagcgcgccagcttggcggactcggccgcaagcttctcgaagatgtcgttga 378
Query: 340 tgaaggagttcatgatggacatggccttggacgagatgccaatgtccgggtgcacctgct 399
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 377 tgaaggagttcatgatggacatggccttggacgagatgccgatgtccgggtgcacctgct 318
Query: 400 tgagcaccttgaagatgtagatcttgtacgtctc 433
|||||||||||||||||||||||||||| |||||
Sbjct: 317 tgagcaccttgaagatgtagatcttgtaggtctc 284
Score = 63.9 bits (32), Expect = 2e-008
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 524 ctcctccgccggcttcttctccgcgggcttcttctcggccttgggcgccatc 575
||||||||| ||||||||| |||| ||||||||||| |||||||| ||||||
Sbjct: 145 ctcctccgcgggcttcttcgccgccggcttcttctccgccttgggtgccatc 94
>gb|AW680031.1|AW680031 WS1_34_A02.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 558
Score = 416 bits (210), Expect = e-114
Identities = 258/274 (94%)
Strand = Plus / Minus
Query: 160 cctaagaggatgtaaacttggtaaccgccttggtcccttcggatacggcgtgcttggcga 219
||||||| || || |||||||| || |||||||| || ||||| ||||||||||||||||
Sbjct: 429 cctaagaagaggtgaacttggtgacagccttggtgccctcggagacggcgtgcttggcga 370
Query: 220 gctcgccggggaggacgaggcgcaccgaggtctggatctcccgggaggtgatggtgggct 279
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 369 gctcgccggggaggacgaggcgcaccgaggtctggatctcgcgggaggtgatggtgggct 310
Query: 280 tcttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttga 339
||||||||||||| || |||||||||| |||||| || ||||||||||||||||||||||
Sbjct: 309 tcttgttgtagcgcgccagcttggcggactcggccgcaagcttctcgaagatgtcgttga 250
Query: 340 tgaaggagttcatgatggacatggccttggacgagatgccaatgtccgggtgcacctgct 399
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 249 tgaaggagttcatgatggacatggccttggacgagatgccgatgtccgggtgcacctgct 190
Query: 400 tgagcaccttgaagatgtagatcttgtacgtctc 433
|||||||||||||||||||||||||||| |||||
Sbjct: 189 tgagcaccttgaagatgtagatcttgtaggtctc 156
>gb|BE355526.1|BE355526 DG1_114_A03.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 662
Score = 416 bits (210), Expect = e-114
Identities = 258/274 (94%)
Strand = Plus / Minus
Query: 160 cctaagaggatgtaaacttggtaaccgccttggtcccttcggatacggcgtgcttggcga 219
||||||| || || |||||||| || |||||||| || ||||| ||||||||||||||||
Sbjct: 423 cctaagaagaggtgaacttggtgacagccttggtgccctcggagacggcgtgcttggcga 364
Query: 220 gctcgccggggaggacgaggcgcaccgaggtctggatctcccgggaggtgatggtgggct 279
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 363 gctcgccggggaggacgaggcgcaccgaggtctggatctcgcgggaggtgatggtgggct 304
Query: 280 tcttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttga 339
||||||||||||| || |||||||||| |||||| || ||||||||||||||||||||||
Sbjct: 303 tcttgttgtagcgcgccagcttggcggactcggccgcaagcttctcgaagatgtcgttga 244
Query: 340 tgaaggagttcatgatggacatggccttggacgagatgccaatgtccgggtgcacctgct 399
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 243 tgaaggagttcatgatggacatggccttggacgagatgccgatgtccgggtgcacctgct 184
Query: 400 tgagcaccttgaagatgtagatcttgtacgtctc 433
|||||||||||||||||||||||||||| |||||
Sbjct: 183 tgagcaccttgaagatgtagatcttgtaggtctc 150
>gb|BG410872.1|BG410872 EM1_27_A01.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 537
Score = 416 bits (210), Expect = e-114
Identities = 258/274 (94%)
Strand = Plus / Minus
Query: 160 cctaagaggatgtaaacttggtaaccgccttggtcccttcggatacggcgtgcttggcga 219
||||||| || || |||||||| || |||||||| || ||||| ||||||||||||||||
Sbjct: 395 cctaagaagaggtgaacttggtgacagccttggtgccctcggagacggcgtgcttggcga 336
Query: 220 gctcgccggggaggacgaggcgcaccgaggtctggatctcccgggaggtgatggtgggct 279
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 335 gctcgccggggaggacgaggcgcaccgaggtctggatctcgcgggaggtgatggtgggct 276
Query: 280 tcttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttga 339
||||||||||||| || |||||||||| |||||| || ||||||||||||||||||||||
Sbjct: 275 tcttgttgtagcgcgccagcttggcggactcggccgcaagcttctcgaagatgtcgttga 216
Query: 340 tgaaggagttcatgatggacatggccttggacgagatgccaatgtccgggtgcacctgct 399
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 215 tgaaggagttcatgatggacatggccttggacgagatgccgatgtccgggtgcacctgct 156
Query: 400 tgagcaccttgaagatgtagatcttgtacgtctc 433
|||||||||||||||||||||||||||| |||||
Sbjct: 155 tgagcaccttgaagatgtagatcttgtaggtctc 122
>gb|CF071535.1|CF071535 FE1_17_C03.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_17_C03_A002 3', mRNA sequence
Length = 466
Score = 416 bits (210), Expect = e-114
Identities = 258/274 (94%)
Strand = Plus / Minus
Query: 160 cctaagaggatgtaaacttggtaaccgccttggtcccttcggatacggcgtgcttggcga 219
||||||| || || |||||||| || |||||||| || ||||| ||||||||||||||||
Sbjct: 341 cctaagaagaggtgaacttggtgacagccttggtgccctcggagacggcgtgcttggcga 282
Query: 220 gctcgccggggaggacgaggcgcaccgaggtctggatctcccgggaggtgatggtgggct 279
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 281 gctcgccggggaggacgaggcgcaccgaggtctggatctcgcgggaggtgatggtgggct 222
Query: 280 tcttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttga 339
||||||||||||| || |||||||||| |||||| || ||||||||||||||||||||||
Sbjct: 221 tcttgttgtagcgcgccagcttggcggactcggccgcaagcttctcgaagatgtcgttga 162
Query: 340 tgaaggagttcatgatggacatggccttggacgagatgccaatgtccgggtgcacctgct 399
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 161 tgaaggagttcatgatggacatggccttggacgagatgccgatgtccgggtgcacctgct 102
Query: 400 tgagcaccttgaagatgtagatcttgtacgtctc 433
|||||||||||||||||||||||||||| |||||
Sbjct: 101 tgagcaccttgaagatgtagatcttgtaggtctc 68
>gb|AI724175.1|AI724175 RHIZ1_8_A04.y2_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 509
Score = 414 bits (209), Expect = e-114
Identities = 257/273 (94%)
Strand = Plus / Minus
Query: 161 ctaagaggatgtaaacttggtaaccgccttggtcccttcggatacggcgtgcttggcgag 220
|||||| || || ||||||||||| |||||||| || ||||| |||||||||||||||||
Sbjct: 391 ctaagatgaggtgaacttggtaacggccttggtgccctcggacacggcgtgcttggcgag 332
Query: 221 ctcgccggggaggacgaggcgcaccgaggtctggatctcccgggaggtgatggtgggctt 280
|||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 331 ctcgcctgggaggacgaggcgcaccgacgtctggatctccctggaggtgatggtgggctt 272
Query: 281 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 340
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 271 cttgttgtagcgggcgagcttggcggcctcgccggcgagcttctcgaagatgtcgttgat 212
Query: 341 gaaggagttcatgatggacatggccttggacgagatgccaatgtccgggtgcacctgctt 400
|||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||
Sbjct: 211 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtgcacctgctt 152
Query: 401 gagcaccttgaagatgtagatcttgtacgtctc 433
|||||||||||||||||||||||||| |||||
Sbjct: 151 cagcaccttgaagatgtagatcttgtaggtctc 119
>gb|BE355360.1|BE355360 DG1_114_A03.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 526
Score = 414 bits (209), Expect = e-114
Identities = 257/273 (94%)
Strand = Plus / Minus
Query: 161 ctaagaggatgtaaacttggtaaccgccttggtcccttcggatacggcgtgcttggcgag 220
|||||| || || |||||||| || |||||||| || ||||| |||||||||||||||||
Sbjct: 526 ctaagaagaggtgaacttggtgacagccttggtgccctcggagacggcgtgcttggcgag 467
Query: 221 ctcgccggggaggacgaggcgcaccgaggtctggatctcccgggaggtgatggtgggctt 280
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 466 ctcgccggggaggacgaggcgcaccgaggtctggatctcgcgggaggtgatggtgggctt 407
Query: 281 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 340
|||||||||||| || |||||||||| |||||| || |||||||||||||||||||||||
Sbjct: 406 cttgttgtagcgcgccagcttggcggactcggccgcaagcttctcgaagatgtcgttgat 347
Query: 341 gaaggagttcatgatggacatggccttggacgagatgccaatgtccgggtgcacctgctt 400
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 346 gaaggagttcatgatggacatggccttggacgagatgccgatgtccgggtgcacctgctt 287
Query: 401 gagcaccttgaagatgtagatcttgtacgtctc 433
||||||||||||||||||||||||||| |||||
Sbjct: 286 gagcaccttgaagatgtagatcttgtaggtctc 254
Score = 63.9 bits (32), Expect = 2e-008
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 524 ctcctccgccggcttcttctccgcgggcttcttctcggccttgggcgccatc 575
||||||||| ||||||||| |||| ||||||||||| |||||||| ||||||
Sbjct: 115 ctcctccgcgggcttcttcgccgccggcttcttctccgccttgggtgccatc 64
>gb|CF074009.1|CF074009 FE1_9_D12.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_9_D12_A002 5', mRNA sequence
Length = 269
Score = 402 bits (203), Expect = e-110
Identities = 248/263 (94%)
Strand = Plus / Plus
Query: 153 gcggcaccctaagaggatgtaaacttggtaaccgccttggtcccttcggatacggcgtgc 212
|||||| |||||||||| |||||||||||||| |||||||| || ||||| || ||||||
Sbjct: 7 gcggcagcctaagaggaagtaaacttggtaacagccttggtgccctcggagaccgcgtgc 66
Query: 213 ttggcgagctcgccggggaggacgaggcgcaccgaggtctggatctcccgggaggtgatg 272
||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 67 ttggcgagctcgccgggaaggacgaggcgcaccgacgtctggatctcccgggaagtgatg 126
Query: 273 gtgggcttcttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatg 332
||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 127 gtgggcttcttgttgtaacgggcgaacttggcggcctcgggggcgagcttctcgaagatg 186
Query: 333 tcgttgatgaaggagttcatgatggacatggccttggacgagatgccaatgtccgggtgc 392
|||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 187 tcgttgatgaaggagttcatgatggacatggccttggaggagataccaatgtccgggtgc 246
Query: 393 acctgcttgagcaccttgaagat 415
|||||||||||||||||||||||
Sbjct: 247 acctgcttgagcaccttgaagat 269
>gb|CW306661.1|CW306661 104_792_11466961_148_35713_007 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11466961, DNA
sequence
Length = 711
Score = 400 bits (202), Expect = e-110
Identities = 259/278 (93%)
Strand = Plus / Minus
Query: 161 ctaagaggatgtaaacttggtaaccgccttggtcccttcggatacggcgtgcttggcgag 220
|||||| || || |||||||| || |||||||| || ||||| |||||||||||||||||
Sbjct: 292 ctaagacgaggtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgag 233
Query: 221 ctcgccggggaggacgaggcgcaccgaggtctggatctcccgggaggtgatggtgggctt 280
||| ||||||||||||||||| || || ||||||||||| ||||| ||||||||||||||
Sbjct: 232 ctccccggggaggacgaggcggacggaagtctggatctctcgggacgtgatggtgggctt 173
Query: 281 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 340
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 172 cttgttgtagcgggcgagcttggcggactcggcggcgagcttctcgaagatgtcgttgat 113
Query: 341 gaaggagttcatgatggacatggccttggacgagatgccaatgtccgggtgcacctgctt 400
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 112 gaaggagttcatgatggacatggccttggaggagatgccgatgtccgggtgcacctgctt 53
Query: 401 gagcaccttgaagatgtagatcttgtacgtctcgacgc 438
||||||||||||||||||||||||||| ||||| ||||
Sbjct: 52 gagcaccttgaagatgtagatcttgtaggtctccacgc 15
>gb|BE917707.1|BE917707 OV1_6_B04.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 554
Score = 400 bits (202), Expect = e-110
Identities = 259/278 (93%)
Strand = Plus / Minus
Query: 161 ctaagaggatgtaaacttggtaaccgccttggtcccttcggatacggcgtgcttggcgag 220
|||||| || || |||||||| || |||||||| || ||||| |||||||||||||||||
Sbjct: 549 ctaagacgaggtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgag 490
Query: 221 ctcgccggggaggacgaggcgcaccgaggtctggatctcccgggaggtgatggtgggctt 280
||| ||||||||||||||||| || || ||||||||||| ||||| ||||||||||||||
Sbjct: 489 ctccccggggaggacgaggcggacggaagtctggatctctcgggacgtgatggtgggctt 430
Query: 281 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 340
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 429 cttgttgtagcgggcgagcttggcggactcggcggcgagcttctcgaagatgtcgttgat 370
Query: 341 gaaggagttcatgatggacatggccttggacgagatgccaatgtccgggtgcacctgctt 400
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 369 gaaggagttcatgatggacatggccttggaggagatgccgatgtccgggtgcacctgctt 310
Query: 401 gagcaccttgaagatgtagatcttgtacgtctcgacgc 438
||||||||||||||||||||||||||| ||||| ||||
Sbjct: 309 gagcaccttgaagatgtagatcttgtaggtctccacgc 272
Score = 71.9 bits (36), Expect = 7e-011
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 524 ctcctccgccggcttcttctccgcgggcttcttctcggccttgggcgccatc 575
||||||||| ||||||||| |||| ||||||||||| |||||||||||||||
Sbjct: 138 ctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccatc 87
Score = 46.1 bits (23), Expect = 0.004
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 511 tcttctcggccttctcctccgccggcttcttctccgcgggcttcttc 557
||||||| |||||||| |||| |||| || ||||||||||||||||
Sbjct: 166 tcttctccgccttctcggccgcgggctcctcctccgcgggcttcttc 120
>gb|BG411209.1|BG411209 EM1_27_A01.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 498
Score = 396 bits (200), Expect = e-108
Identities = 227/236 (96%)
Strand = Plus / Minus
Query: 198 tcggatacggcgtgcttggcgagctcgccggggaggacgaggcgcaccgaggtctggatc 257
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tcggagacggcgtgcttggcgagctcgccggggaggacgaggcgcaccgaggtctggatc 438
Query: 258 tcccgggaggtgatggtgggcttcttgttgtagcgggcgagcttggcggcctcggcggcg 317
|| |||||||||||||||||||||||||||||||| || |||||||||| |||||| ||
Sbjct: 437 tcgcgggaggtgatggtgggcttcttgttgtagcgcgccagcttggcggactcggccgca 378
Query: 318 agcttctcgaagatgtcgttgatgaaggagttcatgatggacatggccttggacgagatg 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 agcttctcgaagatgtcgttgatgaaggagttcatgatggacatggccttggacgagatg 318
Query: 378 ccaatgtccgggtgcacctgcttgagcaccttgaagatgtagatcttgtacgtctc 433
|| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 317 ccgatgtccgggtgcacctgcttgagcaccttgaagatgtagatcttgtaggtctc 262
Score = 63.9 bits (32), Expect = 2e-008
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 524 ctcctccgccggcttcttctccgcgggcttcttctcggccttgggcgccatc 575
||||||||| ||||||||| |||| ||||||||||| |||||||| ||||||
Sbjct: 123 ctcctccgcgggcttcttcgccgccggcttcttctccgccttgggtgccatc 72
>gb|CW128767.1|CW128767 104_510_11114194_148_34755_039 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11114194, DNA
sequence
Length = 652
Score = 394 bits (199), Expect = e-108
Identities = 259/279 (92%)
Strand = Plus / Plus
Query: 160 cctaagaggatgtaaacttggtaaccgccttggtcccttcggatacggcgtgcttggcga 219
||||||| || || |||||||| || |||||||| || || || ||||||||||||||||
Sbjct: 191 cctaagacgaggtgaacttggtgacggccttggtgccctcagagacggcgtgcttggcga 250
Query: 220 gctcgccggggaggacgaggcgcaccgaggtctggatctcccgggaggtgatggtgggct 279
|||| ||||||||||||||||| || ||||||||||||||||| || |||||||||||||
Sbjct: 251 gctccccggggaggacgaggcggacggaggtctggatctcccgagaagtgatggtgggct 310
Query: 280 tcttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttga 339
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 311 tcttgttgtagcgggcgagcttggcggcctcgccggcgagcttctcgaagatgtcgttga 370
Query: 340 tgaaggagttcatgatggacatggccttggacgagatgccaatgtccgggtgcacctgct 399
|||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 371 tgaacgagttcatgatggacatggccttggaggagatgccgatgtccgggtgcacctgct 430
Query: 400 tgagcaccttgaagatgtagatcttgtacgtctcgacgc 438
| |||||||||||||||||||||||||||||||| ||||
Sbjct: 431 tcagcaccttgaagatgtagatcttgtacgtctccacgc 469
>gb|AW745446.1|AW745446 WS1_34_A02.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 500
Score = 394 bits (199), Expect = e-108
Identities = 226/235 (96%)
Strand = Plus / Minus
Query: 199 cggatacggcgtgcttggcgagctcgccggggaggacgaggcgcaccgaggtctggatct 258
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 cggagacggcgtgcttggcgagctcgccggggaggacgaggcgcaccgaggtctggatct 439
Query: 259 cccgggaggtgatggtgggcttcttgttgtagcgggcgagcttggcggcctcggcggcga 318
| |||||||||||||||||||||||||||||||| || |||||||||| |||||| || |
Sbjct: 438 cgcgggaggtgatggtgggcttcttgttgtagcgcgccagcttggcggactcggccgcaa 379
Query: 319 gcttctcgaagatgtcgttgatgaaggagttcatgatggacatggccttggacgagatgc 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gcttctcgaagatgtcgttgatgaaggagttcatgatggacatggccttggacgagatgc 319
Query: 379 caatgtccgggtgcacctgcttgagcaccttgaagatgtagatcttgtacgtctc 433
| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 318 cgatgtccgggtgcacctgcttgagcaccttgaagatgtagatcttgtaggtctc 264
Score = 63.9 bits (32), Expect = 2e-008
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 524 ctcctccgccggcttcttctccgcgggcttcttctcggccttgggcgccatc 575
||||||||| ||||||||| |||| ||||||||||| |||||||| ||||||
Sbjct: 125 ctcctccgcgggcttcttcgccgccggcttcttctccgccttgggtgccatc 74
>gb|BG240440.1|BG240440 OV1_30_A12.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 555
Score = 394 bits (199), Expect = e-108
Identities = 259/279 (92%)
Strand = Plus / Minus
Query: 160 cctaagaggatgtaaacttggtaaccgccttggtcccttcggatacggcgtgcttggcga 219
||||||| || || |||||||| || |||||||| || || || ||||||||||||||||
Sbjct: 533 cctaagacgaggtgaacttggtgacggccttggtgccctcagagacggcgtgcttggcga 474
Query: 220 gctcgccggggaggacgaggcgcaccgaggtctggatctcccgggaggtgatggtgggct 279
|||| ||||||||||||||||| || ||||||||||||||||| || |||||||||||||
Sbjct: 473 gctccccggggaggacgaggcggacggaggtctggatctcccgagaagtgatggtgggct 414
Query: 280 tcttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttga 339
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 413 tcttgttgtagcgggcgagcttggcggcctcgccggcgagcttctcgaagatgtcgttga 354
Query: 340 tgaaggagttcatgatggacatggccttggacgagatgccaatgtccgggtgcacctgct 399
|||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 353 tgaacgagttcatgatggacatggccttggaggagatgccgatgtccgggtgcacctgct 294
Query: 400 tgagcaccttgaagatgtagatcttgtacgtctcgacgc 438
| |||||||||||||||||||||||||||||||| ||||
Sbjct: 293 tcagcaccttgaagatgtagatcttgtacgtctccacgc 255
Score = 56.0 bits (28), Expect = 4e-006
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 524 ctcctccgccggcttcttctccgcgggcttcttctcggccttgggcgccatc 575
||||||| | ||||||||| | || ||||||||||| |||||||||||||||
Sbjct: 127 ctcctccacgggcttcttcgctgccggcttcttctccgccttgggcgccatc 76
>gb|AI724884.1|AI724884 RHIZ1_30_G03.y3_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 388
Score = 392 bits (198), Expect = e-107
Identities = 297/328 (90%), Gaps = 4/328 (1%)
Strand = Plus / Minus
Query: 60 tcattcagcaattataacaaattctacattgttgcacgaacaacctagcacaggcctaaa 119
|||||||||| || ||||||||||||| |||| ||||| ||||||||||| ||||||||
Sbjct: 328 tcattcagcagatacaacaaattctacactgtttcacgagcaacctagcactggcctaaa 269
Query: 120 tat--gag--aattaaacaggatcgtagcaacgtgcggcggcaccctaagaggatgtaaa 175
| ||| || ||||| || ||||||| ||||| || ||| |||||||||| |||||
Sbjct: 268 cacacgaggaaacgaaacaagaccgtagcaccgtgcagcagcaacctaagaggaagtaaa 209
Query: 176 cttggtaaccgccttggtcccttcggatacggcgtgcttggcgagctcgccggggaggac 235
||||||||| |||||||| || ||||| ||||||||||| |||||||||||||| |||||
Sbjct: 208 cttggtaacagccttggtgccctcggaaacggcgtgcttcgcgagctcgccgggaaggac 149
Query: 236 gaggcgcaccgaggtctggatctcccgggaggtgatggtgggcttcttgttgtagcgggc 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 gaggcgcaccgaggtctggatctcccgggaggtgatggtgggcttcttgttgtagcgggc 89
Query: 296 gagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttcatgat 355
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 88 gagcttggcggcctcggcggcgagcttctcgaagatatcgttgatgaaggagttcatgat 29
Query: 356 ggacatggccttggacgagatgccaatg 383
||||||||| ||||||||||| ||||||
Sbjct: 28 ggacatggctttggacgagataccaatg 1
>gb|BZ341857.1|BZ341857 ic79b05.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ic79b05 5', DNA sequence
Length = 685
Score = 391 bits (197), Expect = e-107
Identities = 248/265 (93%)
Strand = Plus / Plus
Query: 174 aacttggtaaccgccttggtcccttcggatacggcgtgcttggcgagctcgccggggagg 233
|||||||| || |||||||| || || || ||||||||||| |||||||| |||||||||
Sbjct: 94 aacttggtgacggccttggtgccctcagagacggcgtgcttcgcgagctccccggggagg 153
Query: 234 acgaggcgcaccgaggtctggatctcccgggaggtgatggtgggcttcttgttgtagcgg 293
|||||||| || |||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 154 acgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtaccgc 213
Query: 294 gcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttcatg 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 gcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttcatg 273
Query: 354 atggacatggccttggacgagatgccaatgtccgggtgcacctgcttgagcaccttgaag 413
||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 274 atggacatggccttggaggagatgccgatgtccgggtgcacctgcttcagcaccttgaag 333
Query: 414 atgtagatcttgtacgtctcgacgc 438
|||||||||||||||||||| ||||
Sbjct: 334 atgtagatcttgtacgtctccacgc 358
Score = 79.8 bits (40), Expect = 3e-013
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 524 ctcctccgccggcttcttctccgcgggcttcttctcggccttgggcgccatc 575
|||||||||| |||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 486 ctcctccgccagcttcttcgccgcgggtttcttctcggccttgggcgccatc 537
>gb|CL152064.1|CL152064 104_335_10779694_116_31364_094 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10779694, DNA
sequence
Length = 690
Score = 391 bits (197), Expect = e-107
Identities = 248/265 (93%)
Strand = Plus / Plus
Query: 174 aacttggtaaccgccttggtcccttcggatacggcgtgcttggcgagctcgccggggagg 233
|||||||| || |||||||| || || || ||||||||||| |||||||| |||||||||
Sbjct: 280 aacttggtgacggccttggtgccctcagagacggcgtgcttcgcgagctccccggggagg 339
Query: 234 acgaggcgcaccgaggtctggatctcccgggaggtgatggtgggcttcttgttgtagcgg 293
|||||||| || |||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 340 acgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtaccgc 399
Query: 294 gcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttcatg 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 gcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttcatg 459
Query: 354 atggacatggccttggacgagatgccaatgtccgggtgcacctgcttgagcaccttgaag 413
||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 460 atggacatggccttggaggagatgccgatgtccgggtgcacctgcttcagcaccttgaag 519
Query: 414 atgtagatcttgtacgtctcgacgc 438
|||||||||||||||||||| ||||
Sbjct: 520 atgtagatcttgtacgtctccacgc 544
>gb|CW155043.1|CW155043 104_557_11145924_116_36362_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11145924, DNA
sequence
Length = 743
Score = 391 bits (197), Expect = e-107
Identities = 248/265 (93%)
Strand = Plus / Minus
Query: 174 aacttggtaaccgccttggtcccttcggatacggcgtgcttggcgagctcgccggggagg 233
|||||||| || |||||||| || || || ||||||||||| |||||||| |||||||||
Sbjct: 539 aacttggtgacggccttggtgccctcagagacggcgtgcttcgcgagctccccggggagg 480
Query: 234 acgaggcgcaccgaggtctggatctcccgggaggtgatggtgggcttcttgttgtagcgg 293
|||||||| || |||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 479 acgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtaccgc 420
Query: 294 gcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttcatg 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttcatg 360
Query: 354 atggacatggccttggacgagatgccaatgtccgggtgcacctgcttgagcaccttgaag 413
||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 359 atggacatggccttggaggagatgccgatgtccgggtgcacctgcttcagcaccttgaag 300
Query: 414 atgtagatcttgtacgtctcgacgc 438
|||||||||||||||||||| ||||
Sbjct: 299 atgtagatcttgtacgtctccacgc 275
Score = 79.8 bits (40), Expect = 3e-013
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 524 ctcctccgccggcttcttctccgcgggcttcttctcggccttgggcgccatc 575
|||||||||| |||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 147 ctcctccgccagcttcttcgccgcgggtttcttctcggccttgggcgccatc 96
>gb|CW155044.1|CW155044 104_557_11145924_148_36361_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11145924, DNA
sequence
Length = 679
Score = 391 bits (197), Expect = e-107
Identities = 248/265 (93%)
Strand = Plus / Plus
Query: 174 aacttggtaaccgccttggtcccttcggatacggcgtgcttggcgagctcgccggggagg 233
|||||||| || |||||||| || || || ||||||||||| |||||||| |||||||||
Sbjct: 345 aacttggtgacggccttggtgccctcagagacggcgtgcttcgcgagctccccggggagg 404
Query: 234 acgaggcgcaccgaggtctggatctcccgggaggtgatggtgggcttcttgttgtagcgg 293
|||||||| || |||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 405 acgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtaccgc 464
Query: 294 gcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttcatg 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 gcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttcatg 524
Query: 354 atggacatggccttggacgagatgccaatgtccgggtgcacctgcttgagcaccttgaag 413
||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 525 atggacatggccttggaggagatgccgatgtccgggtgcacctgcttcagcaccttgaag 584
Query: 414 atgtagatcttgtacgtctcgacgc 438
|||||||||||||||||||| ||||
Sbjct: 585 atgtagatcttgtacgtctccacgc 609
>gb|BF480763.1|BF480763 FM1_14_F11.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 592
Score = 391 bits (197), Expect = e-107
Identities = 248/265 (93%)
Strand = Plus / Minus
Query: 174 aacttggtaaccgccttggtcccttcggatacggcgtgcttggcgagctcgccggggagg 233
|||||||| || |||||||| || || || ||||||||||| |||||||| |||||||||
Sbjct: 419 aacttggtgacggccttggtgccctcagagacggcgtgcttcgcgagctccccggggagg 360
Query: 234 acgaggcgcaccgaggtctggatctcccgggaggtgatggtgggcttcttgttgtagcgg 293
|||||||| || |||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 359 acgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtaccgc 300
Query: 294 gcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttcatg 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 gcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttcatg 240
Query: 354 atggacatggccttggacgagatgccaatgtccgggtgcacctgcttgagcaccttgaag 413
||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 239 atggacatggccttggaggagatgccgatgtccgggtgcacctgcttcagcaccttgaag 180
Query: 414 atgtagatcttgtacgtctcgacgc 438
|||||||||||||||||||| ||||
Sbjct: 179 atgtagatcttgtacgtctccacgc 155
>gb|BG049096.1|BG049096 OV1_23_C04.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 372
Score = 391 bits (197), Expect = e-107
Identities = 241/256 (94%)
Strand = Plus / Minus
Query: 161 ctaagaggatgtaaacttggtaaccgccttggtcccttcggatacggcgtgcttggcgag 220
|||||| || || ||||||||||| |||||||| || ||||| |||||||||||||||||
Sbjct: 256 ctaagatgaggtgaacttggtaacggccttggtgccctcggacacggcgtgcttggcgag 197
Query: 221 ctcgccggggaggacgaggcgcaccgaggtctggatctcccgggaggtgatggtgggctt 280
|||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 196 ctcgcctgggaggacgaggcgcaccgacgtctggatctccctggaggtgatggtgggctt 137
Query: 281 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 340
||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 136 cttgttgtancgggcgagcttggcggcctcgccggcgagcttctcgaagatgtcgttgat 77
Query: 341 gaaggagttcatgatggacatggccttggacgagatgccaatgtccgggtgcacctgctt 400
|||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||
Sbjct: 76 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtgcacctgctt 17
Query: 401 gagcaccttgaagatg 416
||||||||||||||||
Sbjct: 16 gagcaccttgaagatg 1
>gb|CD213618.1|CD213618 HS1_52_G12.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_52_G12_A012 3', mRNA sequence
Length = 611
Score = 391 bits (197), Expect = e-107
Identities = 248/265 (93%)
Strand = Plus / Minus
Query: 174 aacttggtaaccgccttggtcccttcggatacggcgtgcttggcgagctcgccggggagg 233
|||||||| || |||||||| || || || |||||||||||||||||| | |||||||||
Sbjct: 366 aacttggtgacggccttggtgccctcagagacggcgtgcttggcgagccccccggggagg 307
Query: 234 acgaggcgcaccgaggtctggatctcccgggaggtgatggtgggcttcttgttgtagcgg 293
|||||||| || |||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 306 acgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtaccgc 247
Query: 294 gcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttcatg 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttcatg 187
Query: 354 atggacatggccttggacgagatgccaatgtccgggtgcacctgcttgagcaccttgaag 413
||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 186 atggacatggccttggaggagatgccgatgtccgggtgcacctgcttcagcaccttgaag 127
Query: 414 atgtagatcttgtacgtctcgacgc 438
|||||||||||||||||||| ||||
Sbjct: 126 atgtagatcttgtacgtctccacgc 102
>gb|CD213713.1|CD213713 HS1_52_G12.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_52_G12_A012 5', mRNA sequence
Length = 729
Score = 391 bits (197), Expect = e-107
Identities = 248/265 (93%)
Strand = Plus / Minus
Query: 174 aacttggtaaccgccttggtcccttcggatacggcgtgcttggcgagctcgccggggagg 233
|||||||| || |||||||| || || || |||||||||||||||||| | |||||||||
Sbjct: 525 aacttggtgacggccttggtgccctcagagacggcgtgcttggcgagccccccggggagg 466
Query: 234 acgaggcgcaccgaggtctggatctcccgggaggtgatggtgggcttcttgttgtagcgg 293
|||||||| || |||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 465 acgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtaccgc 406
Query: 294 gcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttcatg 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 gcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttcatg 346
Query: 354 atggacatggccttggacgagatgccaatgtccgggtgcacctgcttgagcaccttgaag 413
||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 345 atggacatggccttggaggagatgccgatgtccgggtgcacctgcttcagcaccttgaag 286
Query: 414 atgtagatcttgtacgtctcgacgc 438
|||||||||||||||||||| ||||
Sbjct: 285 atgtagatcttgtacgtctccacgc 261
Score = 87.7 bits (44), Expect = 1e-015
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 524 ctcctccgccggcttcttctccgcgggcttcttctcggccttgggcgccatc 575
|||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 133 ctcctccgccagcttcttcgccgcgggcttcttctcggccttgggcgccatc 82
>gb|CD462726.1|CD462726 ETH1_39_B03.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_39_B03_A002 5', mRNA sequence
Length = 637
Score = 391 bits (197), Expect = e-107
Identities = 248/265 (93%)
Strand = Plus / Minus
Query: 174 aacttggtaaccgccttggtcccttcggatacggcgtgcttggcgagctcgccggggagg 233
|||||||| || |||||||| || || || ||||||||||| |||||||| |||||||||
Sbjct: 537 aacttggtgacggccttggtgccctcagagacggcgtgcttcgcgagctccccggggagg 478
Query: 234 acgaggcgcaccgaggtctggatctcccgggaggtgatggtgggcttcttgttgtagcgg 293
|||||||| || |||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 477 acgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtaccgc 418
Query: 294 gcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttcatg 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttcatg 358
Query: 354 atggacatggccttggacgagatgccaatgtccgggtgcacctgcttgagcaccttgaag 413
||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 357 atggacatggccttggaggagatgccgatgtccgggtgcacctgcttcagcaccttgaag 298
Query: 414 atgtagatcttgtacgtctcgacgc 438
|||||||||||||||||||| ||||
Sbjct: 297 atgtagatcttgtacgtctccacgc 273
Score = 79.8 bits (40), Expect = 3e-013
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 524 ctcctccgccggcttcttctccgcgggcttcttctcggccttgggcgccatc 575
|||||||||| |||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 144 ctcctccgccagcttcttcgccgcgggtttcttctcggccttgggcgccatc 93
>gb|CX606979.1|CX606979 ANR1_6_B05.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_B05_A002 3', mRNA sequence
Length = 665
Score = 391 bits (197), Expect = e-107
Identities = 248/265 (93%)
Strand = Plus / Minus
Query: 174 aacttggtaaccgccttggtcccttcggatacggcgtgcttggcgagctcgccggggagg 233
|||||||| || |||||||| || || || ||||||||||| |||||||| |||||||||
Sbjct: 496 aacttggtgacggccttggtgccctcagagacggcgtgcttcgcgagctccccggggagg 437
Query: 234 acgaggcgcaccgaggtctggatctcccgggaggtgatggtgggcttcttgttgtagcgg 293
|||||||| || |||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 436 acgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtaccgc 377
Query: 294 gcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttcatg 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttcatg 317
Query: 354 atggacatggccttggacgagatgccaatgtccgggtgcacctgcttgagcaccttgaag 413
||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 316 atggacatggccttggaggagatgccgatgtccgggtgcacctgcttcagcaccttgaag 257
Query: 414 atgtagatcttgtacgtctcgacgc 438
|||||||||||||||||||| ||||
Sbjct: 256 atgtagatcttgtacgtctccacgc 232
Score = 79.8 bits (40), Expect = 3e-013
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 524 ctcctccgccggcttcttctccgcgggcttcttctcggccttgggcgccatc 575
|||||||||| |||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 104 ctcctccgccagcttcttcgccgcgggtttcttctcggccttgggcgccatc 53
>gb|CX607063.1|CX607063 ANR1_6_B05.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_B05_A002 5', mRNA sequence
Length = 702
Score = 391 bits (197), Expect = e-107
Identities = 248/265 (93%)
Strand = Plus / Minus
Query: 174 aacttggtaaccgccttggtcccttcggatacggcgtgcttggcgagctcgccggggagg 233
|||||||| || |||||||| || || || ||||||||||| |||||||| |||||||||
Sbjct: 515 aacttggtgacggccttggtgccctcagagacggcgtgcttcgcgagctccccggggagg 456
Query: 234 acgaggcgcaccgaggtctggatctcccgggaggtgatggtgggcttcttgttgtagcgg 293
|||||||| || |||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 455 acgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtaccgc 396
Query: 294 gcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttcatg 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttcatg 336
Query: 354 atggacatggccttggacgagatgccaatgtccgggtgcacctgcttgagcaccttgaag 413
||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 335 atggacatggccttggaggagatgccgatgtccgggtgcacctgcttcagcaccttgaag 276
Query: 414 atgtagatcttgtacgtctcgacgc 438
|||||||||||||||||||| ||||
Sbjct: 275 atgtagatcttgtacgtctccacgc 251
Score = 79.8 bits (40), Expect = 3e-013
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 524 ctcctccgccggcttcttctccgcgggcttcttctcggccttgggcgccatc 575
|||||||||| |||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 123 ctcctccgccagcttcttcgccgcgggtttcttctcggccttgggcgccatc 72
>gb|CX610420.1|CX610420 ANR1_18_D02.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_18_D02_A002 5', mRNA sequence
Length = 711
Score = 391 bits (197), Expect = e-107
Identities = 248/265 (93%)
Strand = Plus / Minus
Query: 174 aacttggtaaccgccttggtcccttcggatacggcgtgcttggcgagctcgccggggagg 233
|||||||| || |||||||| || || || ||||||||||| |||||||| |||||||||
Sbjct: 514 aacttggtgacggccttggtgccctcagagacggcgtgcttcgcgagctccccggggagg 455
Query: 234 acgaggcgcaccgaggtctggatctcccgggaggtgatggtgggcttcttgttgtagcgg 293
|||||||| || |||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 454 acgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtaccgc 395
Query: 294 gcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttcatg 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 gcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttcatg 335
Query: 354 atggacatggccttggacgagatgccaatgtccgggtgcacctgcttgagcaccttgaag 413
||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 334 atggacatggccttggaggagatgccgatgtccgggtgcacctgcttcagcaccttgaag 275
Query: 414 atgtagatcttgtacgtctcgacgc 438
|||||||||||||||||||| ||||
Sbjct: 274 atgtagatcttgtacgtctccacgc 250
Score = 79.8 bits (40), Expect = 3e-013
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 524 ctcctccgccggcttcttctccgcgggcttcttctcggccttgggcgccatc 575
|||||||||| |||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 122 ctcctccgccagcttcttcgccgcgggtttcttctcggccttgggcgccatc 71
>gb|CW088567.1|CW088567 104_433_10948227_116_32575_006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10948227, DNA
sequence
Length = 733
Score = 389 bits (196), Expect = e-106
Identities = 311/346 (89%), Gaps = 5/346 (1%)
Strand = Plus / Plus
Query: 60 tcattcagcaattataacaaattctacattgttgcacgaacaacctagcacaggcctaa- 118
|||||||||| || ||||||||||||| |||| ||||| | ||| ||||| |||||||
Sbjct: 389 tcattcagcagatacaacaaattctacactgtttcacgagcgacccagcactggcctaaa 448
Query: 119 -atatgag--aattaaacaggatcgtagcaacgtgcggcggcaccctaagaggatgtaaa 175
| | ||| || ||||| || ||||||| | ||| |||||| |||||||||| |||||
Sbjct: 449 cacacgaggaaacgaaacaagaccgtagcaccatgcagcggcagcctaagaggaagtaaa 508
Query: 176 cttggtaaccgccttggtcccttcggatacggcgtgcttggcgagctcgccggggaggac 235
||||||||| |||||||| || ||||| |||||||||||||||||||||||||| |||||
Sbjct: 509 cttggtaacagccttggtgccctcggagacggcgtgcttggcgagctcgccgggaaggac 568
Query: 236 gaggcgcaccgaggtctggatctcccgggaggtgatggtgggcttcttgttgtagcgggc 295
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 gaggcgcaccgacgtctggatctcccgggaggtgatggtgggcttcttgttgtagcgggc 628
Query: 296 gagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttcatgat 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 gagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttcatgat 688
Query: 356 ggacatggccttggacgagatgccaatgtccgggtgcacctgcttg 401
|||||||||||| | ||||| || |||||||||||||||||||||
Sbjct: 689 ggacatggcctttggagagatacc-atgtccgggtgcacctgcttg 733
>gb|AI723845.1|AI723845 RHIZ1_28_B06.y1_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 557
Score = 387 bits (195), Expect = e-105
Identities = 258/279 (92%)
Strand = Plus / Minus
Query: 160 cctaagaggatgtaaacttggtaaccgccttggtcccttcggatacggcgtgcttggcga 219
||||||| || || |||||||| || |||||||| || || || ||||||||||||||||
Sbjct: 283 cctaagacgaggtgaacttggtgacggccttggtgccctcagagacggcgtgcttggcga 224
Query: 220 gctcgccggggaggacgaggcgcaccgaggtctggatctcccgggaggtgatggtgggct 279
|||| ||||||||||||||||| || ||||||||||||||||| || |||||||||||||
Sbjct: 223 gctccccggggaggacgaggcggacggaggtctggatctcccgagaagtgatggtgggct 164
Query: 280 tcttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttga 339
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 163 tcttgttgtagcgggcgagcttggcggcctcgccggcgagcttctcgaagatgtcattga 104
Query: 340 tgaaggagttcatgatggacatggccttggacgagatgccaatgtccgggtgcacctgct 399
||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||
Sbjct: 103 tgaaggagttcatgatggacatggccttggaggagataccgatgtccgggtgcacctgct 44
Query: 400 tgagcaccttgaagatgtagatcttgtacgtctcgacgc 438
| |||||||||||||||||||||||||||||||| ||||
Sbjct: 43 tcagcaccttgaagatgtagatcttgtacgtctccacgc 5
>gb|BG488106.1|BG488106 RHIZ2_63_D10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 514
Score = 387 bits (195), Expect = e-105
Identities = 258/279 (92%)
Strand = Plus / Minus
Query: 160 cctaagaggatgtaaacttggtaaccgccttggtcccttcggatacggcgtgcttggcga 219
||||||| || || |||||||| || |||||||| || || || ||||||||||||||||
Sbjct: 411 cctaagacgaggtgaacttggtgacggccttggtgccctcagagacggcgtgcttggcga 352
Query: 220 gctcgccggggaggacgaggcgcaccgaggtctggatctcccgggaggtgatggtgggct 279
|||| ||||||||||||||||| || ||||||||||||||||| || |||||||||||||
Sbjct: 351 gctccccggggaggacgaggcggacggaggtctggatctcccgagaagtgatggtgggct 292
Query: 280 tcttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttga 339
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 291 tcttgttgtagcgggcgagcttggcggcctcgccggcgagcttctcgaagatgtcattga 232
Query: 340 tgaaggagttcatgatggacatggccttggacgagatgccaatgtccgggtgcacctgct 399
||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||
Sbjct: 231 tgaaggagttcatgatggacatggccttggaggagataccgatgtccgggtgcacctgct 172
Query: 400 tgagcaccttgaagatgtagatcttgtacgtctcgacgc 438
| |||||||||||||||||||||||||||||||| ||||
Sbjct: 171 tcagcaccttgaagatgtagatcttgtacgtctccacgc 133
>gb|BG488416.1|BG488416 RHIZ2_63_D10.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 556
Score = 387 bits (195), Expect = e-105
Identities = 258/279 (92%)
Strand = Plus / Minus
Query: 160 cctaagaggatgtaaacttggtaaccgccttggtcccttcggatacggcgtgcttggcga 219
||||||| || || |||||||| || |||||||| || || || ||||||||||||||||
Sbjct: 539 cctaagacgaggtgaacttggtgacggccttggtgccctcagagacggcgtgcttggcga 480
Query: 220 gctcgccggggaggacgaggcgcaccgaggtctggatctcccgggaggtgatggtgggct 279
|||| ||||||||||||||||| || ||||||||||||||||| || |||||||||||||
Sbjct: 479 gctccccggggaggacgaggcggacggaggtctggatctcccgagaagtgatggtgggct 420
Query: 280 tcttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttga 339
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 419 tcttgttgtagcgggcgagcttggcggcctcgccggcgagcttctcgaagatgtcattga 360
Query: 340 tgaaggagttcatgatggacatggccttggacgagatgccaatgtccgggtgcacctgct 399
||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||
Sbjct: 359 tgaaggagttcatgatggacatggccttggaggagataccgatgtccgggtgcacctgct 300
Query: 400 tgagcaccttgaagatgtagatcttgtacgtctcgacgc 438
| |||||||||||||||||||||||||||||||| ||||
Sbjct: 299 tcagcaccttgaagatgtagatcttgtacgtctccacgc 261
Score = 56.0 bits (28), Expect = 4e-006
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 524 ctcctccgccggcttcttctccgcgggcttcttctcggccttgggcgccatc 575
||||||| | ||||||||| | || ||||||||||| |||||||||||||||
Sbjct: 133 ctcctccacgggcttcttcgctgccggcttcttctccgccttgggcgccatc 82
>gb|CW129063.1|CW129063 104_511_11114353_148_34760_015 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11114353, DNA
sequence
Length = 698
Score = 385 bits (194), Expect = e-105
Identities = 257/278 (92%)
Strand = Plus / Minus
Query: 161 ctaagaggatgtaaacttggtaaccgccttggtcccttcggatacggcgtgcttggcgag 220
||||||||| || |||||||| || |||||||| || ||||| |||||||||||||||||
Sbjct: 640 ctaagaggaggtgaacttggtgacggccttggtaccctcggagacggcgtgcttggcgag 581
Query: 221 ctcgccggggaggacgaggcgcaccgaggtctggatctcccgggaggtgatggtgggctt 280
||| ||||||||||||||||| || |||||||||||||| |||||||| |||||||||||
Sbjct: 580 ctccccggggaggacgaggcggacggaggtctggatctcgcgggaggtaatggtgggctt 521
Query: 281 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 340
|||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||
Sbjct: 520 cttgttgtagcgggcgagcttggcggactccgcggccagcttctcgaagatgtcgttgat 461
Query: 341 gaaggagttcatgatggacatggccttggacgagatgccaatgtccgggtgcacctgctt 400
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 460 gaaggagttcatgatggacatggccttggaggagatgccgatgtccgggtgcacctgctt 401
Query: 401 gagcaccttgaagatgtagatcttgtacgtctcgacgc 438
|| ||||||||||||||||||||||| ||||| ||||
Sbjct: 400 caggaccttgaagatgtagatcttgtaggtctccacgc 363
Score = 63.9 bits (32), Expect = 2e-008
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 524 ctcctccgccggcttcttctccgcgggcttcttctcggccttgggcgccatc 575
||||||||| ||||||||| ||| ||||||||||| |||||||||||||||
Sbjct: 223 ctcctccgcgggcttcttcgacgccggcttcttctctgccttgggcgccatc 172
>gb|CW297850.1|CW297850 104_780_11462260_116_35647_012 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11462260, DNA
sequence
Length = 662
Score = 385 bits (194), Expect = e-105
Identities = 257/278 (92%)
Strand = Plus / Minus
Query: 161 ctaagaggatgtaaacttggtaaccgccttggtcccttcggatacggcgtgcttggcgag 220
||||||||| || |||||||| || |||||||| || ||||| |||||||||||||||||
Sbjct: 367 ctaagaggaggtgaacttggtgacggccttggtaccctcggagacggcgtgcttggcgag 308
Query: 221 ctcgccggggaggacgaggcgcaccgaggtctggatctcccgggaggtgatggtgggctt 280
||| ||||||||||||||||| || |||||||||||||| |||||||| |||||||||||
Sbjct: 307 ctccccggggaggacgaggcggacggaggtctggatctcgcgggaggtaatggtgggctt 248
Query: 281 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 340
|||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||
Sbjct: 247 cttgttgtagcgggcgagcttggcggactccgcggccagcttctcgaagatgtcgttgat 188
Query: 341 gaaggagttcatgatggacatggccttggacgagatgccaatgtccgggtgcacctgctt 400
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 187 gaaggagttcatgatggacatggccttggaggagatgccgatgtccgggtgcacctgctt 128
Query: 401 gagcaccttgaagatgtagatcttgtacgtctcgacgc 438
|| ||||||||||||||||||||||| ||||| ||||
Sbjct: 127 caggaccttgaagatgtagatcttgtaggtctccacgc 90
>gb|BG052252.1|BG052252 RHIZ2_12_B05.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 464
Score = 385 bits (194), Expect = e-105
Identities = 257/278 (92%)
Strand = Plus / Minus
Query: 161 ctaagaggatgtaaacttggtaaccgccttggtcccttcggatacggcgtgcttggcgag 220
||||||||| || |||||||| || |||||||| || ||||| |||||||||||||||||
Sbjct: 360 ctaagaggaggtgaacttggtgacggccttggtaccctcggagacggcgtgcttggcgag 301
Query: 221 ctcgccggggaggacgaggcgcaccgaggtctggatctcccgggaggtgatggtgggctt 280
||| ||||||||||||||||| || |||||||||||||| |||||||| |||||||||||
Sbjct: 300 ctccccggggaggacgaggcggacggaggtctggatctcgcgggaggtaatggtgggctt 241
Query: 281 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 340
|||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||
Sbjct: 240 cttgttgtagcgggcgagcttggcggactccgcggccagcttctcgaagatgtcgttgat 181
Query: 341 gaaggagttcatgatggacatggccttggacgagatgccaatgtccgggtgcacctgctt 400
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 180 gaaggagttcatgatggacatggccttggaggagatgccgatgtccgggtgcacctgctt 121
Query: 401 gagcaccttgaagatgtagatcttgtacgtctcgacgc 438
|| ||||||||||||||||||||||| ||||| ||||
Sbjct: 120 caggaccttgaagatgtagatcttgtaggtctccacgc 83
>gb|BG102543.1|BG102543 RHIZ2_34_D04.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 495
Score = 385 bits (194), Expect = e-105
Identities = 257/278 (92%)
Strand = Plus / Minus
Query: 161 ctaagaggatgtaaacttggtaaccgccttggtcccttcggatacggcgtgcttggcgag 220
||||||||| || |||||||| || |||||||| || ||||| |||||||||||||||||
Sbjct: 376 ctaagaggaggtgaacttggtgacggccttggtaccctcggagacggcgtgcttggcgag 317
Query: 221 ctcgccggggaggacgaggcgcaccgaggtctggatctcccgggaggtgatggtgggctt 280
||| ||||||||||||||||| || |||||||||||||| |||||||| |||||||||||
Sbjct: 316 ctccccggggaggacgaggcggacggaggtctggatctcgcgggaggtaatggtgggctt 257
Query: 281 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 340
|||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||
Sbjct: 256 cttgttgtagcgggcgagcttggcggactccgcggccagcttctcgaagatgtcgttgat 197
Query: 341 gaaggagttcatgatggacatggccttggacgagatgccaatgtccgggtgcacctgctt 400
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 196 gaaggagttcatgatggacatggccttggaggagatgccgatgtccgggtgcacctgctt 137
Query: 401 gagcaccttgaagatgtagatcttgtacgtctcgacgc 438
|| ||||||||||||||||||||||| ||||| ||||
Sbjct: 136 caggaccttgaagatgtagatcttgtaggtctccacgc 99
>gb|CW410848.1|CW410848 fsbb001f105m09k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f105m09, DNA
sequence
Length = 598
Score = 383 bits (193), Expect = e-104
Identities = 247/265 (93%)
Strand = Plus / Minus
Query: 174 aacttggtaaccgccttggtcccttcggatacggcgtgcttggcgagctcgccggggagg 233
|||||||| || |||||||| || || || ||||||||||| |||||||| |||||||||
Sbjct: 514 aacttggtgacggccttggtgccctcagagacggcgtgcttcgcgagctccccggggagg 455
Query: 234 acgaggcgcaccgaggtctggatctcccgggaggtgatggtgggcttcttgttgtagcgg 293
|||||||| || |||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 454 acgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtaccgc 395
Query: 294 gcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttcatg 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 gcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttcatg 335
Query: 354 atggacatggccttggacgagatgccaatgtccgggtgcacctgcttgagcaccttgaag 413
||||||||| ||||||| |||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 334 atggacatgcccttggaggagatgccgatgtccgggtgcacctgcttcagcaccttgaag 275
Query: 414 atgtagatcttgtacgtctcgacgc 438
|||||||||||||||||||| ||||
Sbjct: 274 atgtagatcttgtacgtctccacgc 250
Score = 79.8 bits (40), Expect = 3e-013
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 524 ctcctccgccggcttcttctccgcgggcttcttctcggccttgggcgccatc 575
|||||||||| |||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 122 ctcctccgccagcttcttcgccgcgggtttcttctcggccttgggcgccatc 71
>gb|BE917630.1|BE917630 OV1_6_B04.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 493
Score = 379 bits (191), Expect = e-103
Identities = 224/235 (95%)
Strand = Plus / Minus
Query: 204 acggcgtgcttggcgagctcgccggggaggacgaggcgcaccgaggtctggatctcccgg 263
|||||||||||||||||||| ||||||||||||||||| || || ||||||||||| |||
Sbjct: 430 acggcgtgcttggcgagctccccggggaggacgaggcggacggaagtctggatctctcgg 371
Query: 264 gaggtgatggtgggcttcttgttgtagcgggcgagcttggcggcctcggcggcgagcttc 323
|| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 370 gacgtgatggtgggcttcttgttgtagcgggcgagcttggcggactcggcggcgagcttc 311
Query: 324 tcgaagatgtcgttgatgaaggagttcatgatggacatggccttggacgagatgccaatg 383
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 310 tcgaagatgtcgttgatgaaggagttcatgatggacatggccttggaggagatgccgatg 251
Query: 384 tccgggtgcacctgcttgagcaccttgaagatgtagatcttgtacgtctcgacgc 438
|||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 250 tccgggtgcacctgcttgagcaccttgaagatgtagatcttgtaggtctccacgc 196
Score = 71.9 bits (36), Expect = 7e-011
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 524 ctcctccgccggcttcttctccgcgggcttcttctcggccttgggcgccatc 575
||||||||| ||||||||| |||| ||||||||||| |||||||||||||||
Sbjct: 62 ctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccatc 11
Score = 46.1 bits (23), Expect = 0.004
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 511 tcttctcggccttctcctccgccggcttcttctccgcgggcttcttc 557
||||||| |||||||| |||| |||| || ||||||||||||||||
Sbjct: 90 tcttctccgccttctcggccgcgggctcctcctccgcgggcttcttc 44
>gb|BF480894.1|BF480894 FM1_14_F11.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 507
Score = 379 bits (191), Expect = e-103
Identities = 224/235 (95%)
Strand = Plus / Minus
Query: 204 acggcgtgcttggcgagctcgccggggaggacgaggcgcaccgaggtctggatctcccgg 263
||||||||||| |||||||| ||||||||||||||||| || |||||||||||||| |||
Sbjct: 496 acggcgtgcttcgcgagctccccggggaggacgaggcggacggaggtctggatctcgcgg 437
Query: 264 gaggtgatggtgggcttcttgttgtagcgggcgagcttggcggcctcggcggcgagcttc 323
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 436 gaggtgatggtgggcttcttgttgtaccgcgcgagcttggcggcctcggcggcgagcttc 377
Query: 324 tcgaagatgtcgttgatgaaggagttcatgatggacatggccttggacgagatgccaatg 383
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 376 tcgaagatgtcgttgatgaaggagttcatgatggacatggccttggaggagatgccgatg 317
Query: 384 tccgggtgcacctgcttgagcaccttgaagatgtagatcttgtacgtctcgacgc 438
||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 316 tccgggtgcacctgcttcagcaccttgaagatgtagatcttgtacgtctccacgc 262
Score = 87.7 bits (44), Expect = 1e-015
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 524 ctcctccgccggcttcttctccgcgggcttcttctcggccttgggcgccatc 575
|||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 134 ctcctccgccagcttcttcgccgcgggcttcttctcggccttgggcgccatc 83
>gb|CW410847.1|CW410847 fsbb001f105m09f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f105m09, DNA
sequence
Length = 733
Score = 377 bits (190), Expect = e-103
Identities = 248/266 (93%), Gaps = 1/266 (0%)
Strand = Plus / Plus
Query: 174 aacttggtaaccgccttggtcccttcggatacggcgtgcttggcgagctcgccggggagg 233
|||||||| || |||||||| || || || ||||||||||| |||||||| |||||||||
Sbjct: 369 aacttggtgacggccttggtgccctcagagacggcgtgcttcgcgagctccccggggagg 428
Query: 234 acgaggcgcaccgaggtctggatctcccgggaggtgatggtgggcttcttgttgtagcgg 293
|||||||| || |||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 429 acgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtaccgc 488
Query: 294 gcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttcatg 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 gcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttcatg 548
Query: 354 atggacatggccttggacgagatgccaatgtccgggtgcacctgcttgagcaccttgaag 413
||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 549 atggacatggccttggaggagatgccgatgtccgggtgcacctgcttcagcaccttgaag 608
Query: 414 atgtagatctt-gtacgtctcgacgc 438
||||||||||| ||||||||| ||||
Sbjct: 609 atgtagatcttggtacgtctccacgc 634
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 204,038
Number of Sequences: 832831
Number of extensions: 204038
Number of successful extensions: 59916
Number of sequences better than 0.5: 149
Number of HSP's better than 0.5 without gapping: 149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59251
Number of HSP's gapped (non-prelim): 580
length of query: 674
length of database: 491,359,669
effective HSP length: 19
effective length of query: 655
effective length of database: 475,535,880
effective search space: 311476001400
effective search space used: 311476001400
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)