BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CCR2
(1466 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CV245139.1|CV245139 WS0256.B21_J10 PT-MB-N-A-15 Populus ... 52 6e-005
gb|AJ778774.1|AJ778774 AJ778774 Populus euphratica cambium ... 50 2e-004
gb|CA933034.1|CA933034 MTU5CS.P2.F03 Aspen stem cDNA Librar... 48 0.001
gb|CK095802.1|CK095802 UA29DPE05.3pR Populus dormant cambiu... 48 0.001
gb|CX655386.1|CX655386 PO02034B08 Poplar SC cDNA library Po... 48 0.001
gb|CX657378.1|CX657378 PO02043H11 Poplar SC cDNA library Po... 48 0.001
gb|AI166563.1|AI166563 xylem.est.383 Poplar xylem Lambda ZA... 46 0.004
gb|CA934091.1|CA934091 MTU3TS.P2.G04 Aspen stem cDNA Librar... 46 0.004
gb|CV234726.1|CV234726 WS01215.B21.1_P22 PT-GT-FL-A-3 Popul... 46 0.004
gb|CV246918.1|CV246918 WS01116.B21_G14 PT-P-FL-A-2 Populus ... 46 0.004
gb|CV249027.1|CV249027 WS01122.B21_M15 PT-P-FL-A-2 Populus ... 46 0.004
gb|DT493775.1|DT493775 WS01116.BR_G14 PT-P-FL-A-2 Populus t... 46 0.004
gb|DT496222.1|DT496222 WS01122.BR_M15 PT-P-FL-A-2 Populus t... 46 0.004
gb|DT517212.1|DT517212 WS02433.B21_K06 PTxD-ICC-N-A-14 Popu... 46 0.004
gb|DT518419.1|DT518419 WS02438.B21_B12 PTxD-ICC-N-A-14 Popu... 46 0.004
gb|DV464242.1|DV464242 MTUNUL1.P25.A01 NUL Populus fremonti... 46 0.004
gb|DV464636.1|DV464636 MTUNUL1.P3.A03 NUL Populus fremontii... 46 0.004
gb|DV464858.1|DV464858 MTUNUL1.P31.F12 NUL Populus fremonti... 46 0.004
gb|DV465223.1|DV465223 MTUNUL1.P36.G07 NUL Populus fremonti... 46 0.004
gb|DV465545.1|DV465545 MTUNUL1.P40.A07 NUL Populus fremonti... 46 0.004
emb|AJ224986.1|PTR224986 Populus trichocarpa mRNA for cinna... 46 0.004
emb|AJ295838.1|PTR295838 Populus balsamifera subsp. trichoc... 46 0.004
gb|AY479973.1| Populus tomentosa cinnamoyl CoA reductase mR... 46 0.004
gb|AF217958.1| Populus tremuloides cinnamoyl CoA reductase ... 46 0.004
gb|BU896229.1|BU896229 X037E09 Populus wood cDNA library Po... 44 0.015
gb|CK088131.1|CK088131 A039P66.3pR Hybrid aspen plasmid lib... 44 0.015
gb|DN498596.1|DN498596 S042G10.5pR Populus imbibed seed cDN... 44 0.015
gb|BU818388.1|BU818388 UA29DPE05 Populus tremula cambium cD... 40 0.23
gb|DN488870.1|DN488870 S042G10.3pR Populus imbibed seed cDN... 40 0.23
gb|CF231192.1|CF231192 PtaC0018E12E1210 Poplar cDNA library... 38 0.93
gb|DV466005.1|DV466005 MTUNUL1.P46.A12 NUL Populus fremonti... 38 0.93
gb|BI068571.1|BI068571 C024P02U Populus strain T89 leaves P... 36 3.7
gb|BI068581.1|BI068581 C024P13U Populus strain T89 leaves P... 36 3.7
gb|BI069696.1|BI069696 C006P21U Populus strain T89 leaves P... 36 3.7
gb|BI070986.1|BI070986 C050P44U Populus strain T89 leaves P... 36 3.7
gb|BI071224.1|BI071224 C053P78U Populus strain T89 leaves P... 36 3.7
gb|BI071427.1|BI071427 C057P46U Populus strain T89 leaves P... 36 3.7
gb|BI071612.1|BI071612 C060P80U Populus strain T89 leaves P... 36 3.7
gb|BI130618.1|BI130618 G108P29Y Populus cambium cDNA librar... 36 3.7
gb|BI137239.1|BI137239 F082P74Y Populus flower cDNA library... 36 3.7
gb|BI137945.1|BI137945 F096P12Y Populus flower cDNA library... 36 3.7
gb|BI138045.1|BI138045 F097P58Y Populus flower cDNA library... 36 3.7
gb|BI139327.1|BI139327 F129P44Y Populus flower cDNA library... 36 3.7
gb|BU816293.1|BU816293 N062H04 Populus bark cDNA library Po... 36 3.7
gb|BU829019.1|BU829019 K033P16P Populus apical shoot cDNA l... 36 3.7
gb|BU834943.1|BU834943 T067E12 Populus apical shoot cDNA li... 36 3.7
gb|BU836879.1|BU836879 T092A06 Populus apical shoot cDNA li... 36 3.7
gb|BU867147.1|BU867147 S074H05 Populus imbibed seed cDNA li... 36 3.7
gb|BU871926.1|BU871926 Q036E02 Populus flower cDNA library ... 36 3.7
gb|BU873906.1|BU873906 Q061E02 Populus flower cDNA library ... 36 3.7
gb|BU880078.1|BU880078 UM41TB08 Populus flower cDNA library... 36 3.7
gb|BU881593.1|BU881593 UM64TH02 Populus flower cDNA library... 36 3.7
gb|BU886470.1|BU886470 R046A08 Populus root cDNA library Po... 36 3.7
gb|BU886691.1|BU886691 R049B07 Populus root cDNA library Po... 36 3.7
gb|BU888383.1|BU888383 P007C11 Populus petioles cDNA librar... 36 3.7
gb|BU890625.1|BU890625 P039E01 Populus petioles cDNA librar... 36 3.7
gb|BU891400.1|BU891400 P049H12 Populus petioles cDNA librar... 36 3.7
gb|CA924132.1|CA924132 MTU7CL.P2.A10 Aspen leaf cDNA Librar... 36 3.7
gb|CA924158.1|CA924158 MTU7CL.P2.D04 Aspen leaf cDNA Librar... 36 3.7
gb|CA925746.1|CA925746 MTU7TL.P5.D05 Aspen leaf cDNA Librar... 36 3.7
gb|CK090543.1|CK090543 F012P36.3pR Populus flower cDNA libr... 36 3.7
gb|CK093114.1|CK093114 G108P29.3pR Populus tension wood cDN... 36 3.7
gb|CK100955.1|CK100955 F012P36.5pR Populus flower cDNA libr... 36 3.7
gb|CK101545.1|CK101545 F097P58.5pR Populus flower cDNA libr... 36 3.7
gb|CK103217.1|CK103217 G108P29.5pR Populus tension wood cDN... 36 3.7
gb|CK109652.1|CK109652 N020B02 Populus bark cDNA library Po... 36 3.7
gb|CK110607.1|CK110607 N068G11 Populus bark cDNA library Po... 36 3.7
gb|CK115204.1|CK115204 Y004F10 Populus infected leaf substr... 36 3.7
gb|CN522154.1|CN522154 GQ0122.B3_L16 GQ012 Populus trichoca... 36 3.7
gb|CV241940.1|CV241940 WS02513.B21_L01 PT-MB-N-A-15 Populus... 36 3.7
gb|CV242476.1|CV242476 WS02515.B21_C16 PT-MB-N-A-15 Populus... 36 3.7
gb|CV245454.1|CV245454 WS0257.B21_H12 PT-MB-N-A-15 Populus ... 36 3.7
gb|CV264358.1|CV264358 WS02024.B21_F01 PTxN-IB-N-A-11 Popul... 36 3.7
gb|CV275363.1|CV275363 WS0176.B21_D14 PTxD-NR-A-8 Populus t... 36 3.7
gb|CV276983.1|CV276983 WS0142.B21_F11 PTxD-IL-A-5 Populus t... 36 3.7
gb|CV277584.1|CV277584 WS0143.B21_P21 PTxD-IL-A-5 Populus t... 36 3.7
gb|CV280691.1|CV280691 WS0137.B21_F10 PTxD-IL-FL-A-4 Populu... 36 3.7
gb|CF936194.1|CF936194 PO3003A12 Populus tomentiglandulosa ... 36 3.7
gb|CF936214.1|CF936214 PO3003C12 Populus tomentiglandulosa ... 36 3.7
gb|CF936328.1|CF936328 PO3004F10 Populus tomentiglandulosa ... 36 3.7
gb|CF936475.1|CF936475 PO3006D12 Populus tomentiglandulosa ... 36 3.7
gb|CX169002.1|CX169002 H03_69-73_15.ab1 leaf inoculated wit... 36 3.7
gb|CX169358.1|CX169358 A06_69-45_02.ab1 leaf inoculated wit... 36 3.7
gb|CX172889.1|CX172889 E06_69-41_10.ab1 leaf inoculated wit... 36 3.7
gb|CX174591.1|CX174591 A06_69-94_02.ab1 leaf inoculated wit... 36 3.7
gb|CX177181.1|CX177181 B11_69-116_03.ab1 leaf inoculated wi... 36 3.7
gb|CX179426.1|CX179426 G03_45-26_13.ab1 leaf inoculated wit... 36 3.7
gb|CX179526.1|CX179526 D04_45-54_08.ab1 leaf inoculated wit... 36 3.7
gb|CX182775.1|CX182775 E04_45-94_10.ab1 leaf inoculated wit... 36 3.7
gb|BP924355.1|BP924355 BP924355 full-length enriched poplar... 36 3.7
gb|BP930341.1|BP930341 BP930341 full-length enriched poplar... 36 3.7
gb|BP934141.1|BP934141 BP934141 full-length enriched poplar... 36 3.7
gb|DN496073.1|DN496073 P035B07.5pR Populus petioles cDNA li... 36 3.7
gb|DT469789.1|DT469789 WS01918.C21_O08 PT-DX-N-A-10 Populus... 36 3.7
gb|DT471556.1|DT471556 WS01214.BR_E06 PT-GT-FL-A-3 Populus ... 36 3.7
gb|DT474119.1|DT474119 WS01230.BR_N23 PT-GT-FL-A-3 Populus ... 36 3.7
gb|DT476797.1|DT476797 WS01230.B21_N23 PT-GT-FL-A-3 Populus... 36 3.7
gb|DT481485.1|DT481485 WS02532.BR_A04 PT-MB-N-A-15 Populus ... 36 3.7
gb|DT486815.1|DT486815 WS02532.B21_A04 PT-MB-N-A-15 Populus... 36 3.7
gb|DT488128.1|DT488128 WS02535.B21_J09 PT-MB-N-A-15 Populus... 36 3.7
gb|DT501063.1|DT501063 WS0131.BR_F15 PTxD-IL-FL-A-4 Populus... 36 3.7
gb|DT503544.1|DT503544 WS0137.BR_A09 PTxD-IL-FL-A-4 Populus... 36 3.7
gb|DT503640.1|DT503640 WS0137.BR_F10 PTxD-IL-FL-A-4 Populus... 36 3.7
gb|DT509979.1|DT509979 WS02425.BR_E07 PTxD-ICC-N-A-14 Popul... 36 3.7
gb|DT524640.1|DT524640 WS02043.C21_D08 PTxN-IB-N-A-11 Popul... 36 3.7
gb|DT525851.1|DT525851 WS02046.C21_H10 PTxN-IB-N-A-11 Popul... 36 3.7
gb|DV463794.1|DV463794 MTUNUL1.P2.E05 NUL Populus fremontii... 36 3.7
gb|DV464473.1|DV464473 MTUNUL1.P28.A05 NUL Populus fremonti... 36 3.7
gb|DV465311.1|DV465311 MTUNUL1.P37.G12 NUL Populus fremonti... 36 3.7
gb|DV466265.1|DV466265 MTUNUL1.P49.D06 NUL Populus fremonti... 36 3.7
>gb|CV245139.1|CV245139 WS0256.B21_J10 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0256_J10 3', mRNA sequence
Length = 896
Score = 52.0 bits (26), Expect = 6e-005
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 582 tgctggagcgacctcgagtattgcaagaacacccagaactggtactgcta 631
|||||||| || || |||||||||||||||||| |||| ||||| |||||
Sbjct: 763 tgctggagtgatcttgagtattgcaagaacaccaagaattggtattgcta 714
Score = 46.1 bits (23), Expect = 0.004
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1005 tacaagttcaccaaccagaggctcaaggatctggg 1039
||||||||||| ||||||| | |||||||||||||
Sbjct: 341 tacaagttcacaaaccagaagatcaaggatctggg 307
Score = 38.2 bits (19), Expect = 0.93
Identities = 28/31 (90%)
Strand = Plus / Minus
Query: 943 tcttcccggagtaccccgtacccaccaagtg 973
||||||||||||| ||| | |||||||||||
Sbjct: 403 tcttcccggagtatcccatccccaccaagtg 373
>gb|AJ778774.1|AJ778774 AJ778774 Populus euphratica cambium 3-6 months Populus euphratica
cDNA clone P0000600006A09F1, mRNA sequence
Length = 697
Score = 50.1 bits (25), Expect = 2e-004
Identities = 109/137 (79%)
Strand = Plus / Plus
Query: 582 tgctggagcgacctcgagtattgcaagaacacccagaactggtactgctacgccaagacg 641
|||||||| || || |||| |||||||||||| |||| ||||| ||||| | |||||
Sbjct: 138 tgctggagtgatcttgagttctgcaagaacaccaagaattggtattgctatggaaagact 197
Query: 642 gtggcggagcagggcgcgtgggaggtggcgcggaagcgagggctggacctggtggtggtg 701
||||| || |||| |||||||| ||||| ||||| ||| | ||||| || || |||
Sbjct: 198 gtggcagaacaggatgcgtgggatgtggctaggaagaaaggagttgacctagttgtagtg 257
Query: 702 aacccggtgctggtgct 718
||||| |||||||||||
Sbjct: 258 aacccagtgctggtgct 274
Score = 46.1 bits (23), Expect = 0.004
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1005 tacaagttcaccaaccagaggctcaaggatctggg 1039
||||||||||| ||||||| | |||||||||||||
Sbjct: 562 tacaagttcacaaaccagaagatcaaggatctggg 596
Score = 38.2 bits (19), Expect = 0.93
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 943 tcttcccggagtaccccgtacccaccaagtg 973
||||||||||||| ||| | |||||||||||
Sbjct: 500 tcttcccggagtatcccatccccaccaagtg 530
>gb|CA933034.1|CA933034 MTU5CS.P2.F03 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 187
Score = 48.1 bits (24), Expect = 0.001
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 687 gacctggtggtggtgaacccggtgctggtgct 718
||||| |||||||||||||| |||||||||||
Sbjct: 61 gacctagtggtggtgaacccagtgctggtgct 92
>gb|CK095802.1|CK095802 UA29DPE05.3pR Populus dormant cambium cDNA library Populus tremula
cDNA clone UA29DPE05 3', mRNA sequence
Length = 860
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 1004 atacaagttcaccaaccagaggctcaaggatctggg 1039
|||||||||||| ||||||| | |||||||||||||
Sbjct: 403 atacaagttcacaaaccagaagatcaaggatctggg 368
Score = 40.1 bits (20), Expect = 0.23
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 687 gacctggtggtggtgaacccggtgctggtgct 718
||||| |||||||||||||| ||| |||||||
Sbjct: 720 gacctagtggtggtgaacccagtgatggtgct 689
Score = 38.2 bits (19), Expect = 0.93
Identities = 28/31 (90%)
Strand = Plus / Minus
Query: 943 tcttcccggagtaccccgtacccaccaagtg 973
||||||||||||| ||| | |||||||||||
Sbjct: 464 tcttcccggagtatcccatccccaccaagtg 434
>gb|CX655386.1|CX655386 PO02034B08 Poplar SC cDNA library Populus alba x Populus tremula var.
glandulosa cDNA clone PO02034B08 5', mRNA sequence
Length = 606
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 1004 atacaagttcaccaaccagaggctcaaggatctggg 1039
|||||||||||| ||||||| | |||||||||||||
Sbjct: 306 atacaagttcacaaaccagaagatcaaggatctggg 341
>gb|CX657378.1|CX657378 PO02043H11 Poplar SC cDNA library Populus alba x Populus tremula var.
glandulosa cDNA clone PO02043H11 5', mRNA sequence
Length = 596
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 1004 atacaagttcaccaaccagaggctcaaggatctggg 1039
|||||||||||| ||||||| | |||||||||||||
Sbjct: 310 atacaagttcacaaaccagaagatcaaggatctggg 345
>gb|AI166563.1|AI166563 xylem.est.383 Poplar xylem Lambda ZAPII library Populus trichocarpa
cDNA 5', mRNA sequence
Length = 425
Score = 46.1 bits (23), Expect = 0.004
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 680 agggctggacctggtggtggtgaacccggtgctggtgct 718
|||| ||||||| |||||||| ||||| |||||||||||
Sbjct: 186 aggggtggacctagtggtggttaacccagtgctggtgct 224
>gb|CA934091.1|CA934091 MTU3TS.P2.G04 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 230
Score = 46.1 bits (23), Expect = 0.004
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 680 agggctggacctggtggtggtgaacccggtgctggtgct 718
|||| ||||||| |||||||| ||||| |||||||||||
Sbjct: 90 aggggtggacctagtggtggttaacccagtgctggtgct 52
>gb|CV234726.1|CV234726 WS01215.B21.1_P22 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01215_P22 3', mRNA sequence
Length = 791
Score = 46.1 bits (23), Expect = 0.004
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 680 agggctggacctggtggtggtgaacccggtgctggtgct 718
|||| ||||||| |||||||| ||||| |||||||||||
Sbjct: 742 aggggtggacctagtggtggttaacccagtgctggtgct 704
>gb|CV246918.1|CV246918 WS01116.B21_G14 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01116_G14 3', mRNA sequence
Length = 697
Score = 46.1 bits (23), Expect = 0.004
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 680 agggctggacctggtggtggtgaacccggtgctggtgct 718
|||| ||||||| |||||||| ||||| |||||||||||
Sbjct: 645 aggggtggacctagtggtggttaacccagtgctggtgct 607
>gb|CV249027.1|CV249027 WS01122.B21_M15 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01122_M15 3', mRNA sequence
Length = 717
Score = 46.1 bits (23), Expect = 0.004
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 680 agggctggacctggtggtggtgaacccggtgctggtgct 718
|||| ||||||| |||||||| ||||| |||||||||||
Sbjct: 651 aggggtggacctagtggtggttaacccagtgctggtgct 613
>gb|DT493775.1|DT493775 WS01116.BR_G14 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01116_G14 5', mRNA sequence
Length = 782
Score = 46.1 bits (23), Expect = 0.004
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 680 agggctggacctggtggtggtgaacccggtgctggtgct 718
|||| ||||||| |||||||| ||||| |||||||||||
Sbjct: 673 aggggtggacctagtggtggttaacccagtgctggtgct 711
>gb|DT496222.1|DT496222 WS01122.BR_M15 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01122_M15 5', mRNA sequence
Length = 854
Score = 46.1 bits (23), Expect = 0.004
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 680 agggctggacctggtggtggtgaacccggtgctggtgct 718
|||| ||||||| |||||||| ||||| |||||||||||
Sbjct: 673 aggggtggacctagtggtggttaacccagtgctggtgct 711
>gb|DT517212.1|DT517212 WS02433.B21_K06 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02433_K06 3', mRNA sequence
Length = 842
Score = 46.1 bits (23), Expect = 0.004
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 680 agggctggacctggtggtggtgaacccggtgctggtgct 718
|||| ||||||| |||||||| ||||| |||||||||||
Sbjct: 769 aggggtggacctagtggtggttaacccagtgctggtgct 731
>gb|DT518419.1|DT518419 WS02438.B21_B12 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02438_B12 3', mRNA sequence
Length = 831
Score = 46.1 bits (23), Expect = 0.004
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 680 agggctggacctggtggtggtgaacccggtgctggtgct 718
|||| ||||||| |||||||| ||||| |||||||||||
Sbjct: 769 aggggtggacctagtggtggttaacccagtgctggtgct 731
>gb|DV464242.1|DV464242 MTUNUL1.P25.A01 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 866
Score = 46.1 bits (23), Expect = 0.004
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 680 agggctggacctggtggtggtgaacccggtgctggtgct 718
|||| ||||||| |||||||| ||||| |||||||||||
Sbjct: 633 aggggtggacctagtggtggttaacccagtgctggtgct 671
>gb|DV464636.1|DV464636 MTUNUL1.P3.A03 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 817
Score = 46.1 bits (23), Expect = 0.004
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 680 agggctggacctggtggtggtgaacccggtgctggtgct 718
|||| ||||||| |||||||| ||||| |||||||||||
Sbjct: 672 aggggtggacctagtggtggttaacccagtgctggtgct 710
>gb|DV464858.1|DV464858 MTUNUL1.P31.F12 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 838
Score = 46.1 bits (23), Expect = 0.004
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 680 agggctggacctggtggtggtgaacccggtgctggtgct 718
|||| ||||||| |||||||| ||||| |||||||||||
Sbjct: 678 aggggtggacctagtggtggttaacccagtgctggtgct 716
>gb|DV465223.1|DV465223 MTUNUL1.P36.G07 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 842
Score = 46.1 bits (23), Expect = 0.004
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 680 agggctggacctggtggtggtgaacccggtgctggtgct 718
|||| ||||||| |||||||| ||||| |||||||||||
Sbjct: 681 aggggtggacctagtggtggttaacccagtgctggtgct 719
>gb|DV465545.1|DV465545 MTUNUL1.P40.A07 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 753
Score = 46.1 bits (23), Expect = 0.004
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 680 agggctggacctggtggtggtgaacccggtgctggtgct 718
|||| ||||||| |||||||| ||||| |||||||||||
Sbjct: 670 aggggtggacctagtggtggttaacccagtgctggtgct 708
>emb|AJ224986.1|PTR224986 Populus trichocarpa mRNA for cinnamoyl CoA reductase
Length = 1376
Score = 46.1 bits (23), Expect = 0.004
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 680 agggctggacctggtggtggtgaacccggtgctggtgct 718
|||| ||||||| |||||||| ||||| |||||||||||
Sbjct: 641 aggggtggacctagtggtggttaacccagtgctggtgct 679
>emb|AJ295838.1|PTR295838 Populus balsamifera subsp. trichocarpa ccr gene for cinnamoyl-CoA
reductase, exons 1-5
Length = 4044
Score = 46.1 bits (23), Expect = 0.004
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 680 agggctggacctggtggtggtgaacccggtgctggtgct 718
|||| ||||||| |||||||| ||||| |||||||||||
Sbjct: 2124 aggggtggacctagtggtggttaacccagtgctggtgct 2162
>gb|AY479973.1| Populus tomentosa cinnamoyl CoA reductase mRNA, complete cds
Length = 1113
Score = 46.1 bits (23), Expect = 0.004
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 680 agggctggacctggtggtggtgaacccggtgctggtgct 718
|||| ||||||| |||||||| ||||| |||||||||||
Sbjct: 595 aggggtggacctagtggtggttaacccagtgctggtgct 633
>gb|AF217958.1| Populus tremuloides cinnamoyl CoA reductase mRNA, complete cds
Length = 1361
Score = 46.1 bits (23), Expect = 0.004
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 680 agggctggacctggtggtggtgaacccggtgctggtgct 718
|||| ||||||| |||||||| ||||| |||||||||||
Sbjct: 636 aggggtggacctagtggtggttaacccagtgctggtgct 674
>gb|BU896229.1|BU896229 X037E09 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 746
Score = 44.1 bits (22), Expect = 0.015
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 685 tggacctggtggtggtgaacccggtgctggtgct 718
||||||| |||||||| ||||| |||||||||||
Sbjct: 678 tggacctagtggtggttaacccagtgctggtgct 711
>gb|CK088131.1|CK088131 A039P66.3pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A039P66 3', mRNA sequence
Length = 743
Score = 44.1 bits (22), Expect = 0.015
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 685 tggacctggtggtggtgaacccggtgctggtgct 718
||||||| |||||||| ||||| |||||||||||
Sbjct: 700 tggacctagtggtggttaacccagtgctggtgct 667
>gb|DN498596.1|DN498596 S042G10.5pR Populus imbibed seed cDNA library Populus tremula cDNA
clone S042G10 5', mRNA sequence
Length = 841
Score = 44.1 bits (22), Expect = 0.015
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 582 tgctggagcgacctcgagtattgcaagaacacccagaactggtactgcta 631
|||||||| || || ||||| |||||||||||| |||| ||||| |||||
Sbjct: 585 tgctggagtgatcttgagtactgcaagaacaccaagaattggtattgcta 634
>gb|BU818388.1|BU818388 UA29DPE05 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 484
Score = 40.1 bits (20), Expect = 0.23
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 687 gacctggtggtggtgaacccggtgctggtgct 718
||||| |||||||||||||| ||| |||||||
Sbjct: 377 gacctagtggtggtgaacccagtgatggtgct 408
>gb|DN488870.1|DN488870 S042G10.3pR Populus imbibed seed cDNA library Populus tremula cDNA
clone S042G10 3', mRNA sequence
Length = 749
Score = 40.1 bits (20), Expect = 0.23
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 687 gacctggtggtggtgaacccggtgctggtgct 718
||||| |||||||||||||| ||| |||||||
Sbjct: 634 gacctagtggtggtgaacccagtggtggtgct 603
Score = 38.2 bits (19), Expect = 0.93
Identities = 28/31 (90%)
Strand = Plus / Minus
Query: 943 tcttcccggagtaccccgtacccaccaagtg 973
||||||| ||||||||| | |||||||||||
Sbjct: 378 tcttcccagagtaccccatccccaccaagtg 348
Score = 38.2 bits (19), Expect = 0.93
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 1005 tacaagttcaccaaccagaggctcaaggatctggg 1039
|||||| |||| ||||||| | |||||||||||||
Sbjct: 316 tacaagctcacaaaccagaagatcaaggatctggg 282
Score = 36.2 bits (18), Expect = 3.7
Identities = 33/38 (86%)
Strand = Plus / Minus
Query: 582 tgctggagcgacctcgagtattgcaagaacacccagaa 619
|||||||| || || ||||| |||||||||||| ||||
Sbjct: 740 tgctggagtgatcttgagtactgcaagaacaccaagaa 703
>gb|CF231192.1|CF231192 PtaC0018E12E1210 Poplar cDNA library from cambial zone Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 734
Score = 38.2 bits (19), Expect = 0.93
Identities = 36/42 (85%)
Strand = Plus / Plus
Query: 931 tcctcgccaagctcttcccggagtaccccgtacccaccaagt 972
|||| || ||| ||||||||||||| ||| | ||||||||||
Sbjct: 552 tccttgcnaagttcttcccggagtatcccatccccaccaagt 593
>gb|DV466005.1|DV466005 MTUNUL1.P46.A12 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 784
Score = 38.2 bits (19), Expect = 0.93
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 685 tggacctggtggtggtgaacccg 707
||||||||||||||||| |||||
Sbjct: 781 tggacctggtggtggtggacccg 759
>gb|BI068571.1|BI068571 C024P02U Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 279
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 145 gttgacgatagtagctgctgct 166
>gb|BI068581.1|BI068581 C024P13U Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 326
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 245 gttgacgatagtagctgctgct 266
>gb|BI069696.1|BI069696 C006P21U Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 385
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 101 gttgacgatagtagctgctgct 122
>gb|BI070986.1|BI070986 C050P44U Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 352
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 188 gttgacgatagtagctgctgct 209
>gb|BI071224.1|BI071224 C053P78U Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 291
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 242 gttgacgatagtagctgctgct 263
>gb|BI071427.1|BI071427 C057P46U Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 259
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 203 gttgacgatagtagctgctgct 224
>gb|BI071612.1|BI071612 C060P80U Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 301
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 118 gttgacgatagtagctgctgct 139
>gb|BI130618.1|BI130618 G108P29Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 379
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 685 tggacctggtggtggtgaaccc 706
||||||||||||||||| ||||
Sbjct: 173 tggacctggtggtggtggaccc 152
>gb|BI137239.1|BI137239 F082P74Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 429
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 191 gttgacgatagtagctgctgct 212
>gb|BI137945.1|BI137945 F096P12Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 243
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 177 gttgacgatagtagctgctgct 198
>gb|BI138045.1|BI138045 F097P58Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 441
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 191 gttgacgatagtagctgctgct 212
>gb|BI139327.1|BI139327 F129P44Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 483
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 180 gttgacgatagtagctgctgct 201
>gb|BU816293.1|BU816293 N062H04 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 688
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 227 gttgacgatagtagctgctgct 248
>gb|BU829019.1|BU829019 K033P16P Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 469
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 128 gttgacgatagtagctgctgct 149
>gb|BU834943.1|BU834943 T067E12 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 592
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 290 gttgacgatagtagctgctgct 311
>gb|BU836879.1|BU836879 T092A06 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 582
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 685 tggacctggtggtggtgaaccc 706
||||||||||||||||| ||||
Sbjct: 185 tggacctggtggtggtggaccc 164
>gb|BU867147.1|BU867147 S074H05 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 681
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 211 gttgacgatagtagctgctgct 232
>gb|BU871926.1|BU871926 Q036E02 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 556
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 683 gctggacctggtggtggt 700
||||||||||||||||||
Sbjct: 242 gctggacctggtggtggt 225
>gb|BU873906.1|BU873906 Q061E02 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 760
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 683 gctggacctggtggtggt 700
||||||||||||||||||
Sbjct: 263 gctggacctggtggtggt 246
>gb|BU880078.1|BU880078 UM41TB08 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 435
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 224 gttgacgatagtagctgctgct 245
>gb|BU881593.1|BU881593 UM64TH02 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 512
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 249 gttgacgatagtagctgctgct 270
>gb|BU886470.1|BU886470 R046A08 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 680
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 211 gttgacgatagtagctgctgct 232
>gb|BU886691.1|BU886691 R049B07 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 484
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 128 gttgacgatagtagctgctgct 149
>gb|BU888383.1|BU888383 P007C11 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 684
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 214 gttgacgatagtagctgctgct 235
>gb|BU890625.1|BU890625 P039E01 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 506
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 183 gttgacgatagtagctgctgct 204
>gb|BU891400.1|BU891400 P049H12 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 554
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 210 gttgacgatagtagctgctgct 231
>gb|CA924132.1|CA924132 MTU7CL.P2.A10 Aspen leaf cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 219
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 62 gttgacgatagtagctgctgct 83
>gb|CA924158.1|CA924158 MTU7CL.P2.D04 Aspen leaf cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 219
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 62 gttgacgatagtagctgctgct 83
>gb|CA925746.1|CA925746 MTU7TL.P5.D05 Aspen leaf cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 640
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 685 tggacctggtggtggtgaaccc 706
||||||||||||||||| ||||
Sbjct: 409 tggacctggtggtggtggaccc 430
>gb|CK090543.1|CK090543 F012P36.3pR Populus flower cDNA library Populus trichocarpa cDNA
clone F012P36 3', mRNA sequence
Length = 709
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 530 gttgacgatagtagctgctgct 509
>gb|CK093114.1|CK093114 G108P29.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G108P29 3', mRNA sequence
Length = 753
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 685 tggacctggtggtggtgaaccc 706
||||||||||||||||| ||||
Sbjct: 481 tggacctggtggtggtggaccc 502
>gb|CK100955.1|CK100955 F012P36.5pR Populus flower cDNA library Populus trichocarpa cDNA
clone F012P36 5', mRNA sequence
Length = 531
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 180 gttgacgatagtagctgctgct 201
>gb|CK101545.1|CK101545 F097P58.5pR Populus flower cDNA library Populus trichocarpa cDNA
clone F097P58 5', mRNA sequence
Length = 494
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 191 gttgacgatagtagctgctgct 212
>gb|CK103217.1|CK103217 G108P29.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G108P29 5', mRNA sequence
Length = 383
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 685 tggacctggtggtggtgaaccc 706
||||||||||||||||| ||||
Sbjct: 161 tggacctggtggtggtggaccc 140
>gb|CK109652.1|CK109652 N020B02 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA clone N020B02 5', mRNA sequence
Length = 698
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 235 gttgacgatagtagctgctgct 256
>gb|CK110607.1|CK110607 N068G11 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA clone N068G11 5', mRNA sequence
Length = 873
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 230 gttgacgatagtagctgctgct 251
>gb|CK115204.1|CK115204 Y004F10 Populus infected leaf substracted cDNA library Populus
tremula cDNA clone Y004F10 5', mRNA sequence
Length = 569
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 225 gttgacgatagtagctgctgct 246
>gb|CN522154.1|CN522154 GQ0122.B3_L16 GQ012 Populus trichocarpa x Populus deltoides cDNA
clone GQ0122_L16 5', mRNA sequence
Length = 480
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 200 gttgacgatagtagctgctgct 221
>gb|CV241940.1|CV241940 WS02513.B21_L01 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02513_L01 3', mRNA sequence
Length = 794
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 685 tggacctggtggtggtgaaccc 706
||||||||||||||||| ||||
Sbjct: 551 tggacctggtggtggtggaccc 572
>gb|CV242476.1|CV242476 WS02515.B21_C16 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02515_C16 3', mRNA sequence
Length = 822
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 685 tggacctggtggtggtgaaccc 706
||||||||||||||||| ||||
Sbjct: 554 tggacctggtggtggtggaccc 575
>gb|CV245454.1|CV245454 WS0257.B21_H12 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0257_H12 3', mRNA sequence
Length = 789
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 685 tggacctggtggtggtgaaccc 706
||||||||||||||||| ||||
Sbjct: 427 tggacctggtggtggtggaccc 448
>gb|CV264358.1|CV264358 WS02024.B21_F01 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02024_F01 3', mRNA sequence
Length = 888
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 703 acccggtgctggtgctgg 720
||||||||||||||||||
Sbjct: 246 acccggtgctggtgctgg 229
>gb|CV275363.1|CV275363 WS0176.B21_D14 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0176_D14 3', mRNA sequence
Length = 815
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 737 gttgacgatagtagctgctgct 716
>gb|CV276983.1|CV276983 WS0142.B21_F11 PTxD-IL-A-5 Populus trichocarpa x Populus deltoides
cDNA clone WS0142_F11 3', mRNA sequence
Length = 868
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 784 gttgacgatagtagctgctgct 763
>gb|CV277584.1|CV277584 WS0143.B21_P21 PTxD-IL-A-5 Populus trichocarpa x Populus deltoides
cDNA clone WS0143_P21 3', mRNA sequence
Length = 839
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 784 gttgacgatagtagctgctgct 763
>gb|CV280691.1|CV280691 WS0137.B21_F10 PTxD-IL-FL-A-4 Populus trichocarpa x Populus deltoides
cDNA clone WS0137_F10 3', mRNA sequence
Length = 860
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 719 gttgacgatagtagctgctgct 698
>gb|CF936194.1|CF936194 PO3003A12 Populus tomentiglandulosa T. Lee cDNA library Populus
tomentiglandulosa cDNA, mRNA sequence
Length = 968
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 213 gttgacgatagtagctgctgct 234
>gb|CF936214.1|CF936214 PO3003C12 Populus tomentiglandulosa T. Lee cDNA library Populus
tomentiglandulosa cDNA, mRNA sequence
Length = 589
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 213 gttgacgatagtagctgctgct 234
>gb|CF936328.1|CF936328 PO3004F10 Populus tomentiglandulosa T. Lee cDNA library Populus
tomentiglandulosa cDNA, mRNA sequence
Length = 1025
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 214 gttgacgatagtagctgctgct 235
>gb|CF936475.1|CF936475 PO3006D12 Populus tomentiglandulosa T. Lee cDNA library Populus
tomentiglandulosa cDNA, mRNA sequence
Length = 854
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 211 gttgacgatagtagctgctgct 232
>gb|CX169002.1|CX169002 H03_69-73_15.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 628
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 203 gttcattgcctcctggct 220
||||||||||||||||||
Sbjct: 469 gttcattgcctcctggct 486
>gb|CX169358.1|CX169358 A06_69-45_02.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 631
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 133 gttgacgatagtagctgctgct 154
>gb|CX172889.1|CX172889 E06_69-41_10.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 627
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 242 gttgacgatagtagctgctgct 263
>gb|CX174591.1|CX174591 A06_69-94_02.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 639
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 258 gttgacgatagtagctgctgct 279
>gb|CX177181.1|CX177181 B11_69-116_03.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 626
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 98 gttgacgatagtagctgctgct 119
>gb|CX179426.1|CX179426 G03_45-26_13.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 520
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 278 gttgacgatagtagctgctgct 299
>gb|CX179526.1|CX179526 D04_45-54_08.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 651
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 203 gttcattgcctcctggct 220
||||||||||||||||||
Sbjct: 454 gttcattgcctcctggct 471
>gb|CX182775.1|CX182775 E04_45-94_10.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 575
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 203 gttcattgcctcctggct 220
||||||||||||||||||
Sbjct: 484 gttcattgcctcctggct 501
>gb|BP924355.1|BP924355 BP924355 full-length enriched poplar cDNA library Populus nigra cDNA
clone PnFL1-031_B06.f 5', mRNA sequence
Length = 527
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 219 gttgacgatagtagctgctgct 240
>gb|BP930341.1|BP930341 BP930341 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-008_M22.r 3', mRNA sequence
Length = 651
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 685 tggacctggtggtggtgaaccc 706
||||||||||||||||| ||||
Sbjct: 532 tggacctggtggtggtggaccc 553
>gb|BP934141.1|BP934141 BP934141 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-060_O17.r 3', mRNA sequence
Length = 572
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 685 tggacctggtggtggtgaaccc 706
||||||||||||||||| ||||
Sbjct: 532 tggacctggtggtggtggaccc 553
>gb|DN496073.1|DN496073 P035B07.5pR Populus petioles cDNA library Populus tremula cDNA clone
P035B07 5', mRNA sequence
Length = 793
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 207 gttgacgatagtagctgctgct 228
>gb|DT469789.1|DT469789 WS01918.C21_O08 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01918_O08 3', mRNA sequence
Length = 861
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 685 tggacctggtggtggtgaaccc 706
||||||||||||||||| ||||
Sbjct: 527 tggacctggtggtggtggaccc 548
>gb|DT471556.1|DT471556 WS01214.BR_E06 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01214_E06 5', mRNA sequence
Length = 407
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 186 gttgacgatagtagctgctgct 207
>gb|DT474119.1|DT474119 WS01230.BR_N23 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01230_N23 5', mRNA sequence
Length = 883
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 186 gttgacgatagtagctgctgct 207
>gb|DT476797.1|DT476797 WS01230.B21_N23 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01230_N23 3', mRNA sequence
Length = 879
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 721 gttgacgatagtagctgctgct 700
>gb|DT481485.1|DT481485 WS02532.BR_A04 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02532_A04 5', mRNA sequence
Length = 657
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 685 tggacctggtggtggtgaaccc 706
||||||||||||||||| ||||
Sbjct: 209 tggacctggtggtggtggaccc 188
>gb|DT486815.1|DT486815 WS02532.B21_A04 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02532_A04 3', mRNA sequence
Length = 657
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 685 tggacctggtggtggtgaaccc 706
||||||||||||||||| ||||
Sbjct: 449 tggacctggtggtggtggaccc 470
>gb|DT488128.1|DT488128 WS02535.B21_J09 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02535_J09 3', mRNA sequence
Length = 880
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 685 tggacctggtggtggtgaaccc 706
||||||||||||||||| ||||
Sbjct: 542 tggacctggtggtggtggaccc 563
>gb|DT501063.1|DT501063 WS0131.BR_F15 PTxD-IL-FL-A-4 Populus trichocarpa x Populus deltoides
cDNA clone WS0131_F15 5', mRNA sequence
Length = 828
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 226 gttgacgatagtagctgctgct 247
>gb|DT503544.1|DT503544 WS0137.BR_A09 PTxD-IL-FL-A-4 Populus trichocarpa x Populus deltoides
cDNA clone WS0137_A09 5', mRNA sequence
Length = 885
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 216 gttgacgatagtagctgctgct 237
>gb|DT503640.1|DT503640 WS0137.BR_F10 PTxD-IL-FL-A-4 Populus trichocarpa x Populus deltoides
cDNA clone WS0137_F10 5', mRNA sequence
Length = 934
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 262 gttgacgatagtagctgctgct 283
>gb|DT509979.1|DT509979 WS02425.BR_E07 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02425_E07 5', mRNA sequence
Length = 793
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 203 gttcattgcctcctggct 220
||||||||||||||||||
Sbjct: 461 gttcattgcctcctggct 478
>gb|DT524640.1|DT524640 WS02043.C21_D08 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02043_D08 3', mRNA sequence
Length = 844
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 703 acccggtgctggtgctgg 720
||||||||||||||||||
Sbjct: 246 acccggtgctggtgctgg 229
>gb|DT525851.1|DT525851 WS02046.C21_H10 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02046_H10 3', mRNA sequence
Length = 581
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 685 tggacctggtggtggtgaaccc 706
||||||||||||||||| ||||
Sbjct: 551 tggacctggtggtggtggaccc 572
>gb|DV463794.1|DV463794 MTUNUL1.P2.E05 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 633
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 203 gttcattgcctcctggct 220
||||||||||||||||||
Sbjct: 199 gttcattgcctcctggct 216
>gb|DV464473.1|DV464473 MTUNUL1.P28.A05 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 782
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 203 gttcattgcctcctggct 220
||||||||||||||||||
Sbjct: 449 gttcattgcctcctggct 466
>gb|DV465311.1|DV465311 MTUNUL1.P37.G12 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 919
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 685 tggacctggtggtggtgaaccc 706
||||||||||||||||| ||||
Sbjct: 805 tggacctggtggtggtggaccc 784
>gb|DV466265.1|DV466265 MTUNUL1.P49.D06 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 855
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1173 gttgacgatactagctgctgct 1194
|||||||||| |||||||||||
Sbjct: 214 gttgacgatagtagctgctgct 235
Database: Populus_nucl_with_EST.fasta
Posted date: May 2, 2006 3:31 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 113,316
Number of Sequences: 369679
Number of extensions: 113316
Number of successful extensions: 33201
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 33035
Number of HSP's gapped (non-prelim): 165
length of query: 1466
length of database: 203,408,664
effective HSP length: 19
effective length of query: 1447
effective length of database: 196,384,763
effective search space: 284168752061
effective search space used: 284168752061
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)