BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= C4H2
(1794 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CV130486.1|CV130486 X9P03a05 Populus stem seasonal libra... 155 6e-036
gb|BU896032.1|BU896032 X034E05 Populus wood cDNA library Po... 139 4e-031
gb|BI129739.1|BI129739 G095P25Y Populus cambium cDNA librar... 131 1e-028
gb|DT486644.1|DT486644 WS02531.B21_I21 PT-MB-N-A-15 Populus... 131 1e-028
dbj|D82815.1|POPPCYP73D Populus kitakamiensis cyp73a mRNA f... 131 1e-028
gb|AJ774243.1|AJ774243 AJ774243 Populus euphratica shoot 3-... 127 1e-027
gb|CF236093.1|CF236093 PtaJXT0030E7E0709 Poplar cDNA librar... 123 2e-026
gb|CK319298.1|CK319298 X9P09b10 Populus stem seasonal libra... 123 2e-026
gb|DT476958.1|DT476958 WS01231.B21_H07 PT-GT-FL-A-3 Populus... 123 2e-026
gb|U47293.1|PTU47293 Populus tremuloides trans-cinnamate 4-... 123 2e-026
gb|AF302495.1|AF302495 Populus trichocarpa X Populus deltoi... 123 2e-026
gb|CA823109.1|CA823109 R21A03 two-month-old roots from clon... 109 4e-022
gb|BI130348.1|BI130348 G104P26Y Populus cambium cDNA librar... 107 1e-021
gb|CF233742.1|CF233742 PtaJXO0027B3B0303 Poplar cDNA librar... 105 6e-021
gb|CK099128.1|CK099128 A052P60.5pR Hybrid aspen plasmid lib... 105 6e-021
gb|DT486038.1|DT486038 WS02529.B21_N19 PT-MB-N-A-15 Populus... 105 6e-021
gb|DT488948.1|DT488948 WS02537.B21_O05 PT-MB-N-A-15 Populus... 105 6e-021
dbj|D82814.1|POPCYP73CC Populus kitakamiensis cyp73c gene f... 105 6e-021
gb|DT485976.1|DT485976 WS02529.B21_K24 PT-MB-N-A-15 Populus... 103 2e-020
gb|BI131155.1|BI131155 G116P22Y Populus cambium cDNA librar... 101 9e-020
gb|BU889586.1|BU889586 P022H08 Populus petioles cDNA librar... 100 3e-019
gb|AI163826.1|AI163826 A049P64U Hybrid aspen plasmid librar... 96 5e-018
gb|BU894988.1|BU894988 X017G06 Populus wood cDNA library Po... 94 2e-017
gb|BI128127.1|BI128127 G071P22Y Populus cambium cDNA librar... 90 3e-016
gb|BU897427.1|BU897427 X057F02 Populus wood cDNA library Po... 90 3e-016
dbj|D82812.1|POPCYP73AA Populus kitakamiensis cyp73a gene f... 90 3e-016
gb|CF229348.1|CF229348 PtaXM0024D12D1208 Poplar cDNA librar... 88 1e-015
gb|CK088430.1|CK088430 A052P60.3pR Hybrid aspen plasmid lib... 88 1e-015
gb|DT515451.1|DT515451 WS02427.B21_J14 PTxD-ICC-N-A-14 Popu... 86 5e-015
gb|BI129357.1|BI129357 G089P64Y Populus cambium cDNA librar... 82 8e-014
gb|BI129799.1|BI129799 G095P72Y Populus cambium cDNA librar... 82 8e-014
gb|CF234113.1|CF234113 PtaJXO2F8F0812 Poplar cDNA library f... 82 8e-014
gb|CF235170.1|CF235170 PtaJXT0019F5F0511 Poplar cDNA librar... 82 8e-014
gb|CV229053.1|CV229053 WS01912.B21_B10 PT-DX-N-A-10 Populus... 80 3e-013
gb|CV240107.1|CV240107 WS0234.B21_G24 PT-MB-A-13 Populus tr... 78 1e-012
gb|BU869348.1|BU869348 M129A09 Populus flower cDNA library ... 74 2e-011
gb|CA821732.1|CA821732 RSH06G02 two-month-old roots from cl... 74 2e-011
gb|CV250349.1|CV250349 WS0113.B21_E16 PT-P-FL-A-2 Populus t... 74 2e-011
gb|CV273950.1|CV273950 WS01712.B21_L12 PTxD-NR-A-8 Populus ... 74 2e-011
gb|DT479967.1|DT479967 WS02527.BR_I09 PT-MB-N-A-15 Populus ... 74 2e-011
gb|AI163968.1|AI163968 A052P60U Hybrid aspen plasmid librar... 70 3e-010
gb|BI127493.1|BI127493 G061P41Y Populus cambium cDNA librar... 66 5e-009
gb|BU894522.1|BU894522 X010F02 Populus wood cDNA library Po... 66 5e-009
gb|BU896102.1|BU896102 X035E11 Populus wood cDNA library Po... 66 5e-009
gb|CF228407.1|CF228407 PtaXM0012F10F1012 Poplar cDNA librar... 66 5e-009
gb|CK099290.1|CK099290 A060P68.5pR Hybrid aspen plasmid lib... 66 5e-009
gb|CN549454.1|CN549454 GQ0242.B3_N07 GQ024 Populus trichoca... 66 5e-009
gb|CV227812.1|CV227812 WS0168.B21_E12 PT-DX-A-7 Populus tri... 66 5e-009
gb|CV229671.1|CV229671 WS01914.B21_B05 PT-DX-N-A-10 Populus... 66 5e-009
gb|CV273641.1|CV273641 WS01711.B21_L02 PTxD-NR-A-8 Populus ... 66 5e-009
gb|CF228907.1|CF228907 PtaXM0018G6G0614 Poplar cDNA library... 58 1e-006
dbj|D82813.1|POPCYP73BB Populus kitakamiensis cyp73b gene f... 58 1e-006
gb|BU882344.1|BU882344 UM75TG07 Populus flower cDNA library... 56 5e-006
gb|CF216368.1|CF216368 PT1341 Hybrid aspen xylem up-regulat... 56 5e-006
gb|BI131664.1|BI131664 G124P02Y Populus cambium cDNA librar... 54 2e-005
gb|BP930384.1|BP930384 BP930384 full-length enriched poplar... 48 0.001
gb|CV274997.1|CV274997 WS0175.B21_A16 PTxD-NR-A-8 Populus t... 46 0.005
gb|AI164359.1|AI164359 A060P68U Hybrid aspen plasmid librar... 44 0.018
gb|CB833355.1|CB833355 R19B01 two-month-old roots from clon... 44 0.018
gb|AI162374.1|AI162374 A016P55U Hybrid aspen plasmid librar... 42 0.071
gb|CK092405.1|CK092405 G082P34.3pR Populus tension wood cDN... 42 0.071
gb|BI131508.1|BI131508 G121P84Y Populus cambium cDNA librar... 40 0.28
gb|BU816607.1|BU816607 N069C05 Populus bark cDNA library Po... 40 0.28
gb|BU895424.1|BU895424 X023H08 Populus wood cDNA library Po... 40 0.28
gb|CA933213.1|CA933213 MTU5CS.P5.A05 Aspen stem cDNA Librar... 40 0.28
gb|CK092172.1|CK092172 G068P87.3pR Populus tension wood cDN... 40 0.28
gb|DV463033.1|DV463033 MTUNUL1.P10.H01 NUL Populus fremonti... 40 0.28
gb|BI129026.1|BI129026 G084P90Y Populus cambium cDNA librar... 38 1.1
gb|CF237075.1|CF237075 PtajxtjxoF3F0311 Poplar cDNA library... 38 1.1
gb|AJ768114.1|AJ768114 AJ768114 Populus euphratica leaf adu... 38 1.1
gb|CV227682.1|CV227682 WS0167.B21_O13 PT-DX-A-7 Populus tri... 38 1.1
gb|BU829384.1|BU829384 K039P74P Populus apical shoot cDNA l... 36 4.4
gb|CA824429.1|CA824429 R41H09 two-month-old roots from clon... 36 4.4
gb|CB833300.1|CB833300 R00A06 two-month-old roots from clon... 36 4.4
gb|DT519590.1|DT519590 WS02443.B21_B06 PTxD-ICC-N-A-14 Popu... 36 4.4
>gb|CV130486.1|CV130486 X9P03a05 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 721
Score = 155 bits (78), Expect = 6e-036
Identities = 284/353 (80%)
Strand = Plus / Plus
Query: 947 gagatcaacgaggacaacgtgctcttcatcgtcgagaacattaacgttgcagcgatcgag 1006
|||||||| ||||||||||| || | |||||| |||||||| || ||||| || || |||
Sbjct: 101 gagatcaatgaggacaacgttctttacatcgtggagaacatcaatgttgctgcaattgag 160
Query: 1007 accacgctgtggtcgatcgagtgggcggtcgctgagctggtgaaccacccggagatccag 1066
|| || ||||||||||| ||||||| | |||||||| |||||||| || || ||||||
Sbjct: 161 acaacactgtggtcgattgagtggggaattgctgagcttgtgaaccatcctgaaatccag 220
Query: 1067 cagaagctgcggcaggagctggacacggtgctcgggccgggccaccagatcacggagccg 1126
||||| |||| | ||||| || || ||||| || ||||| ||||| ||||| |||||
Sbjct: 221 aagaagttgcgtgatgagctcgataccgtgcttggaccgggtcaccaaatcaccgagcct 280
Query: 1127 gacacgcacaacctcccctacctgcaggcggtgatcaaggagacgctgcggctgcggatg 1186
||||| |||| || || ||||| | || || ||||| ||||| || ||||| |||||
Sbjct: 281 gacaccaacaagctgccttaccttaatgctgtcatcaaagagactctccggctcaggatg 340
Query: 1187 gccatcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcggntacgac 1246
|| || || ||||| || || |||||||||||||| || || |||||||| || | |||
Sbjct: 341 gcgattcctctgcttgtcccacacatgaacctccatgatgctaagctcggaggttttgac 400
Query: 1247 atccccgccgagagcaagatcctcgtcaacgcctggtacctcgccaacaaccc 1299
||||||||||||||||||||||| || ||||| |||| || |||||||||||
Sbjct: 401 atccccgccgagagcaagatcctggtaaacgcatggtggcttgccaacaaccc 453
Score = 38.2 bits (19), Expect = 1.1
Identities = 49/59 (83%)
Strand = Plus / Plus
Query: 1364 gaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgccc 1422
|||||||| ||||| || ||||||||||| ||||| || || || | |||||||||||
Sbjct: 518 gaggccaatggcaatgatttcaggtacctcccctttggagttgggagaaggagctgccc 576
>gb|BU896032.1|BU896032 X034E05 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 586
Score = 139 bits (70), Expect = 4e-031
Identities = 282/353 (79%)
Strand = Plus / Plus
Query: 947 gagatcaacgaggacaacgtgctcttcatcgtcgagaacattaacgttgcagcgatcgag 1006
|||||||| ||||||||||| || | ||| || |||||||| || ||||| || ||||||
Sbjct: 210 gagatcaatgaggacaacgttctttacattgtggagaacatcaatgttgctgcaatcgag 269
Query: 1007 accacgctgtggtcgatcgagtgggcggtcgctgagctggtgaaccacccggagatccag 1066
|| || ||||||||||| ||||||| | |||||||| |||||||| || || ||||||
Sbjct: 270 acaacactgtggtcgattgagtggggaattgctgagcttgtgaaccatcctgaaatccag 329
Query: 1067 cagaagctgcggcaggagctggacacggtgctcgggccgggccaccagatcacggagccg 1126
||||| |||| | ||||| || || ||||| || || || ||||| ||||| |||||
Sbjct: 330 aagaagttgcgtgatgagctcgataccgtgcttggacctggtcaccaaatcactgagcct 389
Query: 1127 gacacgcacaacctcccctacctgcaggcggtgatcaaggagacgctgcggctgcggatg 1186
||||| |||| || || ||||| | || || ||||| ||||| || ||||| |||||
Sbjct: 390 gacacctacaagctgccttaccttaatgctgtcatcaaagagactctccggctcaggatg 449
Query: 1187 gccatcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcggntacgac 1246
|| || || ||||| || || |||||||||||||| || || ||||| || || | |||
Sbjct: 450 gcgattcctctgcttgtcccacacatgaacctccatgatgctaagcttggaggttttgac 509
Query: 1247 atccccgccgagagcaagatcctcgtcaacgcctggtacctcgccaacaaccc 1299
||||||||||||||||||||||| || ||||| |||| || |||||||||||
Sbjct: 510 atccccgccgagagcaagatcctggtaaacgcatggtggcttgccaacaaccc 562
>gb|BI129739.1|BI129739 G095P25Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 458
Score = 131 bits (66), Expect = 1e-028
Identities = 269/337 (79%)
Strand = Plus / Plus
Query: 947 gagatcaacgaggacaacgtgctcttcatcgtcgagaacattaacgttgcagcgatcgag 1006
|||||||| ||||||||||| || | ||| || |||||||| || ||||| || ||||||
Sbjct: 122 gagatcaatgaggacaacgttctttacattgtggagaacatcaatgttgctgcaatcgag 181
Query: 1007 accacgctgtggtcgatcgagtgggcggtcgctgagctggtgaaccacccggagatccag 1066
|| || ||||||||||| ||||||| | |||||||| |||||||| || || ||||||
Sbjct: 182 acaacactgtggtcgattgagtggggaattgctgagcttgtgaaccatcctgaaatccag 241
Query: 1067 cagaagctgcggcaggagctggacacggtgctcgggccgggccaccagatcacggagccg 1126
||||| |||| | ||||| || || ||||| || || || ||||| ||||| |||||
Sbjct: 242 aagaagttgcgtgatgagctcgataccgtgcttggacctggtcaccaaatcactgagcct 301
Query: 1127 gacacgcacaacctcccctacctgcaggcggtgatcaaggagacgctgcggctgcggatg 1186
||||| |||| || || ||||| | || || ||||| ||||| || ||||| |||||
Sbjct: 302 gacacctacaagctgccttaccttaatgctgtcatcaaagagactctccggctcaggatg 361
Query: 1187 gccatcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcggntacgac 1246
|| || || ||||| || || |||||||||||||| || || ||||| || || | |||
Sbjct: 362 gcgattcctctgcttgtcccacacatgaacctccatgatgctaagcttggaggttttgac 421
Query: 1247 atccccgccgagagcaagatcctcgtcaacgcctggt 1283
||||||||||||||||||||||| || ||||| ||||
Sbjct: 422 atccccgccgagagcaagatcctggtaaacgcatggt 458
>gb|DT486644.1|DT486644 WS02531.B21_I21 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02531_I21 3', mRNA sequence
Length = 952
Score = 131 bits (66), Expect = 1e-028
Identities = 281/353 (79%)
Strand = Plus / Minus
Query: 947 gagatcaacgaggacaacgtgctcttcatcgtcgagaacattaacgttgcagcgatcgag 1006
|||||||||||||||||||| || | ||| || |||||||| ||||| || || || |||
Sbjct: 900 gagatcaacgaggacaacgttctttacattgttgagaacatcaacgtcgctgcaattgag 841
Query: 1007 accacgctgtggtcgatcgagtgggcggtcgctgagctggtgaaccacccggagatccag 1066
|| || || |||||||||||||||| | |||||||| |||||||| || || ||||||
Sbjct: 840 acaacactatggtcgatcgagtggggaattgctgagcttgtgaaccatcctgaaatccag 781
Query: 1067 cagaagctgcggcaggagctggacacggtgctcgggccgggccaccagatcacggagccg 1126
||||| |||| || ||||| || || |||| || || || ||||| ||||| |||||
Sbjct: 780 aagaagttgcgccatgagctcgataccttgcttggacctggtcaccaaatcaccgagcct 721
Query: 1127 gacacgcacaacctcccctacctgcaggcggtgatcaaggagacgctgcggctgcggatg 1186
||||| |||| ||||| ||||| | || || ||||| ||||| || || || |||||
Sbjct: 720 gacacctacaagctcccttaccttaatgctgtaatcaaagagaccctccgacttaggatg 661
Query: 1187 gccatcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcggntacgac 1246
|| || || || || || || ||||||||||| || || |||||||| || || | ||||
Sbjct: 660 gcaattcctctacttgtcccacacatgaaccttcatgatgccaagcttggaggcttcgac 601
Query: 1247 atccccgccgagagcaagatcctcgtcaacgcctggtacctcgccaacaaccc 1299
|| || || |||||||||||||| ||||| ||||||| ||||||||||||||
Sbjct: 600 attccagctgagagcaagatcctggtcaatgcctggtggctcgccaacaaccc 548
>dbj|D82815.1|POPPCYP73D Populus kitakamiensis cyp73a mRNA for cinnamic acid 4-hydroxylase,
complete cds
Length = 1737
Score = 131 bits (66), Expect = 1e-028
Identities = 287/361 (79%)
Strand = Plus / Plus
Query: 939 agaagggtgagatcaacgaggacaacgtgctcttcatcgtcgagaacattaacgttgcag 998
||||||| |||||||||||||||||||| || | ||| || |||||||| ||||| || |
Sbjct: 919 agaagggagagatcaacgaggacaacgtcctttacattgttgagaacatcaacgtcgctg 978
Query: 999 cgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaaccacccgg 1058
| || ||||| || || |||||||||||||||| | | |||||||| |||||||| || |
Sbjct: 979 caattgagacaacactatggtcgatcgagtgggggattgctgagcttgtgaaccatcctg 1038
Query: 1059 agatccagcagaagctgcggcaggagctggacacggtgctcgggccgggccaccagatca 1118
| |||||| ||||| |||| || ||||| || || |||| || || || ||||| ||||
Sbjct: 1039 aaatccagaagaagttgcgccatgagctcgataccttgcttggacctggtcaccaaatca 1098
Query: 1119 cggagccggacacgcacaacctcccctacctgcaggcggtgatcaaggagacgctgcggc 1178
| ||||| ||||| |||| ||||| ||||| | || || |||| ||||| || || |
Sbjct: 1099 ccgagcctgacacctacaagctcccttaccttaacgctgttgtcaaagagaccctccgac 1158
Query: 1179 tgcggatggccatcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcg 1238
| ||||||| || || || || || || ||||||||||| || || |||||||| || |
Sbjct: 1159 tcaggatggcaattcctctacttgtcccacacatgaaccttcatgatgccaagcttggag 1218
Query: 1239 gntacgacatccccgccgagagcaagatcctcgtcaacgcctggtacctcgccaacaacc 1298
| | ||||| || || |||||||||||| | ||||||||||||| |||||||||||||
Sbjct: 1219 gctttgacattccagctgagagcaagatcttggtcaacgcctggtggctcgccaacaacc 1278
Query: 1299 c 1299
|
Sbjct: 1279 c 1279
Score = 48.1 bits (24), Expect = 0.001
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 1361 gtcgaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgc 1420
||||||||||||||||| || ||||||||||| || || || || || | |||||||||
Sbjct: 1341 gtcgaggccaacggcaatgatttcaggtaccttccatttggagttgggagaaggagctgc 1400
Query: 1421 cccgggat 1428
|| |||||
Sbjct: 1401 cctgggat 1408
>gb|AJ774243.1|AJ774243 AJ774243 Populus euphratica shoot 3-6 months Populus euphratica cDNA
clone P0000300014F06F1, mRNA sequence
Length = 426
Score = 127 bits (64), Expect = 1e-027
Identities = 312/395 (78%)
Strand = Plus / Plus
Query: 905 aagtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggacaac 964
|||||||| || || || |||||||| || || ||||||| ||||||||||||||||||
Sbjct: 13 aagtgcgcaatagaccatatactggatgctcaaaagaagggagagatcaacgaggacaac 72
Query: 965 gtgctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatc 1024
|| || | ||| || |||||||| ||||| || || || ||||| || || |||||||||
Sbjct: 73 gtcctttacattgttgagaacatcaacgtcgccgcaattgagacaacactatggtcgatc 132
Query: 1025 gagtgggcggtcgctgagctggtgaaccacccggagatccagcagaagctgcggcaggag 1084
||||||| | | |||||||| |||||||| || ||||||||| ||||| |||| || |||
Sbjct: 133 gagtgggggattgctgagcttgtgaaccatcctgagatccagaagaagttgcgccatgag 192
Query: 1085 ctggacacggtgctcgggccgggccaccagatcacggagccggacacgcacaacctcccc 1144
|| || || |||| || || |||||||| ||||| ||||| ||||| |||| |||||
Sbjct: 193 cttgataccttgcttggacctggccaccaaatcaccgagcctgacacctacaagctccct 252
Query: 1145 tacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctggtg 1204
||||| | || || ||||| ||||| ||||| || |||||| || || || || ||
Sbjct: 253 taccttaacgctgttatcaaagagaccctgcgactcaggatggaaattcctctacttgtc 312
Query: 1205 ccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagcaag 1264
|| ||||||||||| | || ||||| || || || | ||||| || || || ||||||
Sbjct: 313 ccacacatgaaccttgatgatgccaaccttggaggcttggacattccagctgacagcaag 372
Query: 1265 atcctcgtcaacgcctggtacctcgccaacaaccc 1299
||| | ||||| ||||||| ||||||||||||||
Sbjct: 373 atcttggtcaatgcctggtggctcgccaacaaccc 407
>gb|CF236093.1|CF236093 PtaJXT0030E7E0709 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 596
Score = 123 bits (62), Expect = 2e-026
Identities = 286/361 (79%)
Strand = Plus / Plus
Query: 939 agaagggtgagatcaacgaggacaacgtgctcttcatcgtcgagaacattaacgttgcag 998
||||||| |||||||||||||||||||| || | ||| || |||||||| ||||| || |
Sbjct: 33 agaagggagagatcaacgaggacaacgtcctttacattgttgagaacatcaacgtcgctg 92
Query: 999 cgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaaccacccgg 1058
| || ||||| || || |||||||||||||||| | | |||||||| |||||||| || |
Sbjct: 93 caattgagacaacactatggtcgatcgagtgggggattgctgagcttgtgaaccatcctg 152
Query: 1059 agatccagcagaagctgcggcaggagctggacacggtgctcgggccgggccaccagatca 1118
| |||||| ||||| |||| || ||||| || || |||| || || || ||||| ||||
Sbjct: 153 aaatccagaagaagttgcgccatgagctcgataccttgcttggacctggtcaccaaatca 212
Query: 1119 cggagccggacacgcacaacctcccctacctgcaggcggtgatcaaggagacgctgcggc 1178
| ||||| ||||| |||| ||||| ||||| | || || |||| ||||| || || |
Sbjct: 213 ccgagcctgacacctacaagctcccttaccttaacgctgttgtcaaagagaccctccgac 272
Query: 1179 tgcggatggccatcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcg 1238
| ||||||| || || || || || || ||||||||||| || || |||||||| || |
Sbjct: 273 tcaggatggcaattcctctacttgtcccacacatgaaccttcatgatgccaagcttggag 332
Query: 1239 gntacgacatccccgccgagagcaagatcctcgtcaacgcctggtacctcgccaacaacc 1298
| | ||||| || || |||||||||||| | ||||| ||||||| |||||||||||||
Sbjct: 333 gctttgacattccagctgagagcaagatcttggtcaatgcctggtggctcgccaacaacc 392
Query: 1299 c 1299
|
Sbjct: 393 c 393
Score = 40.2 bits (20), Expect = 0.28
Identities = 56/68 (82%)
Strand = Plus / Plus
Query: 1361 gtcgaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgc 1420
||||||||||| ||||| || ||||||||||| || || || || || | |||||||||
Sbjct: 455 gtcgaggccaatggcaatgatttcaggtaccttccatttggagttgggagaaggagctgc 514
Query: 1421 cccgggat 1428
|| |||||
Sbjct: 515 cctgggat 522
>gb|CK319298.1|CK319298 X9P09b10 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 725
Score = 123 bits (62), Expect = 2e-026
Identities = 280/353 (79%)
Strand = Plus / Plus
Query: 947 gagatcaacgaggacaacgtgctcttcatcgtcgagaacattaacgttgcagcgatcgag 1006
|||||||||||||||||||| || | ||| || |||||||| ||||| || || || |||
Sbjct: 6 gagatcaacgaggacaacgttctttacattgttgagaacatcaacgtcgctgcaattgag 65
Query: 1007 accacgctgtggtcgatcgagtgggcggtcgctgagctggtgaaccacccggagatccag 1066
|| || || |||||||||||||||| | |||||||| |||||||| || || ||||||
Sbjct: 66 acaacactatggtcgatcgagtggggaattgctgagcttgtgaaccatcctgaaatccag 125
Query: 1067 cagaagctgcggcaggagctggacacggtgctcgggccgggccaccagatcacggagccg 1126
||||| |||| || ||||| || || |||| || || || ||||| ||||| |||||
Sbjct: 126 aagaagttgcgccatgagctcgataccttgcttggacctggtcaccaaatcaccgagcct 185
Query: 1127 gacacgcacaacctcccctacctgcaggcggtgatcaaggagacgctgcggctgcggatg 1186
||||| |||| ||||| ||||| | || || ||||| ||||| || || || |||||
Sbjct: 186 gacacctacaagctcccttaccttaatgctgttatcaaagagaccctccgactcaggatg 245
Query: 1187 gccatcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcggntacgac 1246
|| || || || || || || ||||||||||| || || |||||||| || || | ||||
Sbjct: 246 gcaattcctctacttgtcccacacatgaaccttcatgatgccaagcttggaggcttcgac 305
Query: 1247 atccccgccgagagcaagatcctcgtcaacgcctggtacctcgccaacaaccc 1299
|| || || |||||||||||| | ||||| ||||||| ||||||||||||||
Sbjct: 306 attccagctgagagcaagatcttggtcaatgcctggtggctcgccaacaaccc 358
>gb|DT476958.1|DT476958 WS01231.B21_H07 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01231_H07 3', mRNA sequence
Length = 932
Score = 123 bits (62), Expect = 2e-026
Identities = 280/353 (79%)
Strand = Plus / Minus
Query: 947 gagatcaacgaggacaacgtgctcttcatcgtcgagaacattaacgttgcagcgatcgag 1006
|||||||||||||||||||| || | ||| || |||||||| ||||| || || || |||
Sbjct: 888 gagatcaacgaggacaacgttctttacattgttgagaacatcaacgtcgctgcaattgag 829
Query: 1007 accacgctgtggtcgatcgagtgggcggtcgctgagctggtgaaccacccggagatccag 1066
|| || || |||||||||||||||| | |||||||| |||||||| || || ||||||
Sbjct: 828 acaacactatggtcgatcgagtggggaattgctgagcttgtgaaccatcctgaaatccag 769
Query: 1067 cagaagctgcggcaggagctggacacggtgctcgggccgggccaccagatcacggagccg 1126
||||| |||| || ||||| || || |||| || || || ||||| ||||| |||||
Sbjct: 768 aagaagttgcgccatgagctcgataccttgcttggacctggtcaccaaatcaccgagcct 709
Query: 1127 gacacgcacaacctcccctacctgcaggcggtgatcaaggagacgctgcggctgcggatg 1186
||||| |||| ||||| ||||| | || || ||||| ||||| || || || |||||
Sbjct: 708 gacacctacaagctcccttaccttaatgctgtaatcaaagagaccctccgacttaggatg 649
Query: 1187 gccatcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcggntacgac 1246
|| || || || || || || ||||||||||| || || |||||||| || || | ||||
Sbjct: 648 gcaattcctctacttgtcccacacatgaaccttcatgatgccaagcttggaggcttcgac 589
Query: 1247 atccccgccgagagcaagatcctcgtcaacgcctggtacctcgccaacaaccc 1299
|| || || |||||||||||| | ||||| ||||||| ||||||||||||||
Sbjct: 588 attccagctgagagcaagatcttggtcaatgcctggtggctcgccaacaaccc 536
>gb|U47293.1|PTU47293 Populus tremuloides trans-cinnamate 4-hydroxylase (PtC4H) mRNA,
complete cds
Length = 1803
Score = 123 bits (62), Expect = 2e-026
Identities = 286/361 (79%)
Strand = Plus / Plus
Query: 939 agaagggtgagatcaacgaggacaacgtgctcttcatcgtcgagaacattaacgttgcag 998
||||||| |||||||||||||||||||| || | ||| || |||||||| ||||| || |
Sbjct: 934 agaagggagagatcaacgaggacaacgtcctttacattgttgagaacatcaacgtcgctg 993
Query: 999 cgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaaccacccgg 1058
| || ||||| || || |||||||||||||||| | |||||||| |||||||| || |
Sbjct: 994 caattgagacaacactatggtcgatcgagtggggaattgctgagcttgtgaaccatcctg 1053
Query: 1059 agatccagcagaagctgcggcaggagctggacacggtgctcgggccgggccaccagatca 1118
| |||||| ||||| |||| || ||||| || || |||| || || || ||||| ||||
Sbjct: 1054 aaatccagaagaagttgcgccatgagctcgataccttgcttggacctggtcaccaaatca 1113
Query: 1119 cggagccggacacgcacaacctcccctacctgcaggcggtgatcaaggagacgctgcggc 1178
| ||||| ||||| |||| ||||| ||||| | || || |||| ||||| || || |
Sbjct: 1114 ccgagcctgacacctacaagctcccttaccttaacgctgttgtcaaagagaccctccgac 1173
Query: 1179 tgcggatggccatcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcg 1238
| ||||||| || || || || || || ||||||||||| || || |||||||| || |
Sbjct: 1174 tcaggatggcaattcctctactcgtcccacacatgaaccttcatgatgccaagcttggag 1233
Query: 1239 gntacgacatccccgccgagagcaagatcctcgtcaacgcctggtacctcgccaacaacc 1298
| | ||||| || || |||||||||||| | ||||||||||||| |||||||||||||
Sbjct: 1234 gctttgacattccagctgagagcaagatcttggtcaacgcctggtggctcgccaacaacc 1293
Query: 1299 c 1299
|
Sbjct: 1294 c 1294
Score = 40.2 bits (20), Expect = 0.28
Identities = 56/68 (82%)
Strand = Plus / Plus
Query: 1361 gtcgaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgc 1420
||||||||||| ||||| || ||||||||||| || || || || || | |||||||||
Sbjct: 1356 gtcgaggccaatggcaatgatttcaggtaccttccatttggagttgggagaaggagctgc 1415
Query: 1421 cccgggat 1428
|| |||||
Sbjct: 1416 cctgggat 1423
>gb|AF302495.1|AF302495 Populus trichocarpa X Populus deltoides cinnamate 4-hydroxylase (C4H)
mRNA, complete cds
Length = 1750
Score = 123 bits (62), Expect = 2e-026
Identities = 280/353 (79%)
Strand = Plus / Plus
Query: 947 gagatcaacgaggacaacgtgctcttcatcgtcgagaacattaacgttgcagcgatcgag 1006
|||||||||||||||||||| || | ||| || |||||||| ||||| || || || |||
Sbjct: 903 gagatcaacgaggacaacgttctttacattgttgagaacatcaacgtcgctgcaattgag 962
Query: 1007 accacgctgtggtcgatcgagtgggcggtcgctgagctggtgaaccacccggagatccag 1066
|| || || |||||||||||||||| | |||||||| |||||||| || || ||||||
Sbjct: 963 acaacactatggtcgatcgagtggggaattgctgagcttgtgaaccatcctgaaatccag 1022
Query: 1067 cagaagctgcggcaggagctggacacggtgctcgggccgggccaccagatcacggagccg 1126
||||| |||| || ||||| || || |||| || || || ||||| ||||| |||||
Sbjct: 1023 aagaagttgcgccatgagctcgataccttgcttggacctggtcaccaaatcaccgagcct 1082
Query: 1127 gacacgcacaacctcccctacctgcaggcggtgatcaaggagacgctgcggctgcggatg 1186
||||| |||| ||||| ||||| | || || ||||| ||||| || || || |||||
Sbjct: 1083 gacacctacaagctcccttaccttaatgctgttatcaaagagaccctccgactcaggatg 1142
Query: 1187 gccatcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcggntacgac 1246
|| || || || || || || ||||||||||| || || |||||||| || || | ||||
Sbjct: 1143 gcaattcctctacttgtcccacacatgaaccttcatgatgccaagcttggaggcttcgac 1202
Query: 1247 atccccgccgagagcaagatcctcgtcaacgcctggtacctcgccaacaaccc 1299
|| || || |||||||||||| | ||||| ||||||| ||||||||||||||
Sbjct: 1203 attccagctgagagcaagatcttggtcaatgcctggtggctcgccaacaaccc 1255
>gb|CA823109.1|CA823109 R21A03 two-month-old roots from clone 'Beaupre' Populus trichocarpa x
Populus deltoides cDNA 5', mRNA sequence
Length = 644
Score = 109 bits (55), Expect = 4e-022
Identities = 266/337 (78%)
Strand = Plus / Plus
Query: 947 gagatcaacgaggacaacgtgctcttcatcgtcgagaacattaacgttgcagcgatcgag 1006
|||||||||||||||||||| || | ||| || |||||||| ||||| || || || |||
Sbjct: 307 gagatcaacgaggacaacgttctttacattgttgagaacatcaacgtcgctgcaattgag 366
Query: 1007 accacgctgtggtcgatcgagtgggcggtcgctgagctggtgaaccacccggagatccag 1066
|| || || |||||||||||||||| | |||||||| |||||||| || || ||||||
Sbjct: 367 acaacactatggtcgatcgagtggggaattgctgagcttgtgaaccatcctgaaatccag 426
Query: 1067 cagaagctgcggcaggagctggacacggtgctcgggccgggccaccagatcacggagccg 1126
||||| |||| || ||||| || || |||| || || || ||||| ||||| |||||
Sbjct: 427 aagaagttgcgtcatgagctcgataccttgcttggacctggtcaccaaatcaccgagcct 486
Query: 1127 gacacgcacaacctcccctacctgcaggcggtgatcaaggagacgctgcggctgcggatg 1186
||||| |||| ||||| ||||| | || || ||||| ||||| || || || ||||
Sbjct: 487 gacacctacaagctcccttaccttaatgctgtaatcaaagagaccctccgacttaagatg 546
Query: 1187 gccatcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcggntacgac 1246
|| || || || || || || ||||||||||| || || |||||||| || || | ||||
Sbjct: 547 gcaattcctctacttgtcccacacatgaaccttcatgatgccaagctnggaggcttcgac 606
Query: 1247 atccccgccgagagcaagatcctcgtcaacgcctggt 1283
|| || || |||||||||||||| ||||| |||||||
Sbjct: 607 attccagctgagagcaagatcctggtcaatgcctggt 643
>gb|BI130348.1|BI130348 G104P26Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 523
Score = 107 bits (54), Expect = 1e-021
Identities = 272/345 (78%)
Strand = Plus / Plus
Query: 955 cgaggacaacgtgctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgct 1014
|||||||||||| || | ||| || |||||||| ||||| || || || ||||| || ||
Sbjct: 1 cgaggacaacgtcctttacattgttgagaacatcaacgtcgctgcaattgagacaacact 60
Query: 1015 gtggtcgatcgagtgggcggtcgctgagctggtgaaccacccggagatccagcagaagct 1074
|||||||||||||||| | | |||||||| |||||||| || || |||||| ||||| |
Sbjct: 61 atggtcgatcgagtgggggattgctgagcttgtgaaccatcctgaaatccagaagaagtt 120
Query: 1075 gcggcaggagctggacacggtgctcgggccgggccaccagatcacggagccggacacgca 1134
||| || ||||| || || |||| || || || ||||| ||||| ||||| ||||| |
Sbjct: 121 gcgccatgagctcgataccttgcttggacctggtcaccaaatcaccgagcctgacaccta 180
Query: 1135 caacctcccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatccc 1194
||| ||||| ||||| | || || |||| ||||| || || || ||||||| || ||
Sbjct: 181 caagctcccttaccttaacgctgttgtcaaagagaccctccgactcaggatggcaattcc 240
Query: 1195 gctgctggtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgc 1254
|| || || || ||||||||||| || || |||||||| || || | ||||| || ||
Sbjct: 241 tctacttgtcccacacatgaaccttcatgatgccaagcttggaggctttgacattccagc 300
Query: 1255 cgagagcaagatcctcgtcaacgcctggtacctcgccaacaaccc 1299
|||||||||||| | ||||||||||||| ||||||||||||||
Sbjct: 301 tgagagcaagatcttggtcaacgcctggtggctcgccaacaaccc 345
Score = 48.1 bits (24), Expect = 0.001
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 1361 gtcgaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgc 1420
||||||||||||||||| || ||||||||||| || || || || || | |||||||||
Sbjct: 407 gtcgaggccaacggcaatgatttcaggtaccttccatttggagttgggagaaggagctgc 466
Query: 1421 cccgggat 1428
|| |||||
Sbjct: 467 cctgggat 474
>gb|CF233742.1|CF233742 PtaJXO0027B3B0303 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 654
Score = 105 bits (53), Expect = 6e-021
Identities = 197/245 (80%)
Strand = Plus / Plus
Query: 905 aagtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggacaac 964
||||||||||| || || || ||||| || || ||||||| ||||||||||||||||||
Sbjct: 305 aagtgcgccatagaccatatcctggatgctcaaaagaagggagagatcaacgaggacaac 364
Query: 965 gtgctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatc 1024
|| || | ||| || |||||||| ||||| || || || ||||| || || |||||||||
Sbjct: 365 gtcctttacattgttgagaacatcaacgtcgctgcaattgagacaacactatggtcgatc 424
Query: 1025 gagtgggcggtcgctgagctggtgaaccacccggagatccagcagaagctgcggcaggag 1084
||||||| | | |||||||| |||||||| || || |||||| ||||| |||| || |||
Sbjct: 425 gagtgggggattgctgagcttgtgaaccatcctgaaatccagaagaagttgcgccatgag 484
Query: 1085 ctggacacggtgctcgggccgggccaccagatcacggagccggacacgcacaacctcccc 1144
|| || || |||| || || || ||||| ||||| ||||| ||||| |||| |||||
Sbjct: 485 ctcgataccttgcttggacctggtcaccaaatcaccgagcctgacacctacaagctccct 544
Query: 1145 tacct 1149
|||||
Sbjct: 545 tacct 549
>gb|CK099128.1|CK099128 A052P60.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A052P60 5', mRNA sequence
Length = 524
Score = 105 bits (53), Expect = 6e-021
Identities = 257/324 (79%), Gaps = 1/324 (0%)
Strand = Plus / Plus
Query: 947 gagatcaacgaggacaacgtgctcttcatcgtcgagaacattaacgttgcagcgatcgag 1006
|||||||| ||||||||||| || | ||| || |||||||| || ||||| || ||||||
Sbjct: 196 gagatcaatgaggacaacgttctttacattgtggagaacatcaatgttgctgcaatcgag 255
Query: 1007 accacgctgtggtcgatcgagtgggcggtcgctgagctggtgaaccacccggagatccag 1066
|| || ||||||||||| ||||||| | |||||||| |||||||| || || ||||||
Sbjct: 256 acaacactgtggtcgattgagtggggaattgctgagcttgtgaaccatcctgaaatccag 315
Query: 1067 cagaagctgcggcaggagctggacacggtgctcgggccgggccaccagatcacggagccg 1126
||||| |||| | ||||| || || ||||| || || || ||||| ||||| |||||
Sbjct: 316 aagaagttgcgtgatgagctcgataccgtgcttggacctggtcaccaaatcactgagcct 375
Query: 1127 gacacgcacaacctcccctacctgcaggcggtgatcaaggagacgctgcggctgcggatg 1186
||||| |||| || || ||||| | || || ||||| ||||| || ||||| ||||
Sbjct: 376 gacacctacaagctgccttaccttaatgctgtcatcaaagagactctccggctcacgatg 435
Query: 1187 gccatcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcgg-ntacga 1245
|| || || ||||| || || |||||||||||||| || || ||||| || || | ||
Sbjct: 436 gcgattcctctgcttgtcccacacatgaacctccatgatgctaagcttggaggtgtttga 495
Query: 1246 catccccgccgagagcaagatcct 1269
||||||||||||||||||||||||
Sbjct: 496 catccccgccgagagcaagatcct 519
>gb|DT486038.1|DT486038 WS02529.B21_N19 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02529_N19 3', mRNA sequence
Length = 864
Score = 105 bits (53), Expect = 6e-021
Identities = 253/320 (79%)
Strand = Plus / Minus
Query: 980 gagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgct 1039
|||||||| ||||| || || || ||||| || || |||||||||||||||| | |||
Sbjct: 857 gagaacatcaacgtcgctgcaattgagacaacactatggtcgatcgagtggggaattgct 798
Query: 1040 gagctggtgaaccacccggagatccagcagaagctgcggcaggagctggacacggtgctc 1099
||||| |||||||| || || |||||| ||||| |||| || ||||| || || ||||
Sbjct: 797 gagcttgtgaaccatcctgaaatccagaagaagttgcgccatgagctcgataccttgctt 738
Query: 1100 gggccgggccaccagatcacggagccggacacgcacaacctcccctacctgcaggcggtg 1159
|| || || ||||| ||||| ||||| ||||| |||| ||||| ||||| | || ||
Sbjct: 737 ggacctggtcaccaaatcaccgagcctgacacctacaagctcccttaccttaatgctgta 678
Query: 1160 atcaaggagacgctgcggctgcggatggccatcccgctgctggtgccgcacatgaacctc 1219
||||| ||||| || || || ||||||| || || || || || || |||||||||||
Sbjct: 677 atcaaagagaccctccgacttaggatggcaattcctctacttgtcccacacatgaacctt 618
Query: 1220 cacgacgccaagctcggcggntacgacatccccgccgagagcaagatcctcgtcaacgcc 1279
|| || |||||||| || || | |||||| || || |||||||||||||| ||||| |||
Sbjct: 617 catgatgccaagcttggaggcttcgacattccagctgagagcaagatcctggtcaatgcc 558
Query: 1280 tggtacctcgccaacaaccc 1299
|||| ||||||||||||||
Sbjct: 557 tggtggctcgccaacaaccc 538
>gb|DT488948.1|DT488948 WS02537.B21_O05 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02537_O05 3', mRNA sequence
Length = 869
Score = 105 bits (53), Expect = 6e-021
Identities = 253/320 (79%)
Strand = Plus / Minus
Query: 980 gagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgct 1039
|||||||| ||||| || || || ||||| || || |||||||||||||||| | |||
Sbjct: 864 gagaacatcaacgtcgctgcaattgagacaacactatggtcgatcgagtggggaattgct 805
Query: 1040 gagctggtgaaccacccggagatccagcagaagctgcggcaggagctggacacggtgctc 1099
||||| |||||||| || || |||||| ||||| |||| || ||||| || || ||||
Sbjct: 804 gagcttgtgaaccatcctgaaatccagaagaagttgcgccatgagctcgataccttgctt 745
Query: 1100 gggccgggccaccagatcacggagccggacacgcacaacctcccctacctgcaggcggtg 1159
|| || || ||||| ||||| ||||| ||||| |||| ||||| ||||| | || ||
Sbjct: 744 ggacctggtcaccaaatcaccgagcctgacacctacaagctcccttaccttaatgctgta 685
Query: 1160 atcaaggagacgctgcggctgcggatggccatcccgctgctggtgccgcacatgaacctc 1219
||||| ||||| || || || ||||||| || || || || || || |||||||||||
Sbjct: 684 atcaaagagaccctccgacttaggatggcaattcctctacttgtcccacacatgaacctt 625
Query: 1220 cacgacgccaagctcggcggntacgacatccccgccgagagcaagatcctcgtcaacgcc 1279
|| || |||||||| || || | |||||| || || |||||||||||||| ||||| |||
Sbjct: 624 catgatgccaagcttggaggcttcgacattccagctgagagcaagatcctggtcaatgcc 565
Query: 1280 tggtacctcgccaacaaccc 1299
|||| ||||||||||||||
Sbjct: 564 tggtggctcgccaacaaccc 545
>dbj|D82814.1|POPCYP73CC Populus kitakamiensis cyp73c gene for cinnamic acid 4-hydroxylase,
partial cds
Length = 2923
Score = 105 bits (53), Expect = 6e-021
Identities = 241/304 (79%)
Strand = Plus / Plus
Query: 996 cagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaaccacc 1055
|||| |||||||| || ||||||||||| ||||||| | |||||||| |||||||| |
Sbjct: 2071 cagcaatcgagacaacactgtggtcgattgagtggggaattgctgagcttgtgaaccatc 2130
Query: 1056 cggagatccagcagaagctgcggcaggagctggacacggtgctcgggccgggccaccaga 1115
| || |||||| ||||| |||| | ||||| || || ||||| || || || ||||| |
Sbjct: 2131 ctgaaatccagaagaagttgcgtgatgagctcgataccgtgcttggacctggtcaccaaa 2190
Query: 1116 tcacggagccggacacgcacaacctcccctacctgcaggcggtgatcaaggagacgctgc 1175
|||| ||||| ||||| |||| || || ||||| | || || ||||| ||||| || |
Sbjct: 2191 tcactgagcctgacacctacaagctgccttaccttaatgctgtcatcaaagagactctcc 2250
Query: 1176 ggctgcggatggccatcccgctgctggtgccgcacatgaacctccacgacgccaagctcg 1235
| || ||||||| || || ||||| || || |||||||||||||| || || ||||| |
Sbjct: 2251 gactcaggatggcgattcctctgcttgtcccacacatgaacctccatgatgcgaagcttg 2310
Query: 1236 gcggntacgacatccccgccgagagcaagatcctcgtcaacgcctggtacctcgccaaca 1295
| || | |||||||||||||||||||||||||| || ||||| |||| || |||||||
Sbjct: 2311 gaggttttgacatccccgccgagagcaagatcctggtaaacgcatggtggcttgccaaca 2370
Query: 1296 accc 1299
||||
Sbjct: 2371 accc 2374
Score = 46.1 bits (23), Expect = 0.005
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 1364 gaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgccc 1422
|||||||| ||||| || ||||||||||| ||||| || ||||| | |||||||||||
Sbjct: 2439 gaggccaatggcaatgatttcaggtacctcccctttggagtcgggagaaggagctgccc 2497
Score = 44.1 bits (22), Expect = 0.018
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 947 gagatcaacgaggacaacgtgctcttcatcgtcgagaacattaacgttgc 996
|||||||| ||||||||||| || | |||||| |||||||| || |||||
Sbjct: 1124 gagatcaatgaggacaacgttctttacatcgtggagaacatcaatgttgc 1173
Score = 40.2 bits (20), Expect = 0.28
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 1517 gacaccaccgagaagggaggccagttcagtctccacatcttgaagcattccaccat 1572
|||||| | ||||| || || |||||||| | ||||| |||||||||||||||||
Sbjct: 2592 gacacctcagagaaaggtggacagttcagcttgcacattttgaagcattccaccat 2647
>gb|DT485976.1|DT485976 WS02529.B21_K24 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02529_K24 3', mRNA sequence
Length = 841
Score = 103 bits (52), Expect = 2e-020
Identities = 252/319 (78%)
Strand = Plus / Minus
Query: 981 agaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctg 1040
||||||| ||||| || || || ||||| || || |||||||||||||||| | ||||
Sbjct: 841 agaacatcaacgtcgctgcaattgagacaacactatggtcgatcgagtggggaattgctg 782
Query: 1041 agctggtgaaccacccggagatccagcagaagctgcggcaggagctggacacggtgctcg 1100
|||| |||||||| || || |||||| ||||| |||| || ||||| || || |||| |
Sbjct: 781 agcttgtgaaccatcctgaaatccagaagaagttgcgccatgagctcgataccttgcttg 722
Query: 1101 ggccgggccaccagatcacggagccggacacgcacaacctcccctacctgcaggcggtga 1160
| || || ||||| ||||| ||||| ||||| |||| ||||| ||||| | || || |
Sbjct: 721 gacctggtcaccaaatcaccgagcctgacacctacaagctcccttaccttaatgctgtaa 662
Query: 1161 tcaaggagacgctgcggctgcggatggccatcccgctgctggtgccgcacatgaacctcc 1220
|||| ||||| || || || ||||||| || || || || || || ||||||||||| |
Sbjct: 661 tcaaagagaccctccgacttaggatggcaattcctctacttgtcccacacatgaaccttc 602
Query: 1221 acgacgccaagctcggcggntacgacatccccgccgagagcaagatcctcgtcaacgcct 1280
| || |||||||| || || | |||||| || || |||||||||||||| ||||| ||||
Sbjct: 601 atgatgccaagcttggaggcttcgacattccagctgagagcaagatcctggtcaatgcct 542
Query: 1281 ggtacctcgccaacaaccc 1299
||| ||||||||||||||
Sbjct: 541 ggtggctcgccaacaaccc 523
>gb|BI131155.1|BI131155 G116P22Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 318
Score = 101 bits (51), Expect = 9e-020
Identities = 227/286 (79%)
Strand = Plus / Plus
Query: 1014 tgtggtcgatcgagtgggcggtcgctgagctggtgaaccacccggagatccagcagaagc 1073
|||||||||| ||||||| | |||||||| |||||||| || || |||||| |||||
Sbjct: 1 tgtggtcgattgagtggggaattgctgagcttgtgaaccatcctgaaatccagaagaagt 60
Query: 1074 tgcggcaggagctggacacggtgctcgggccgggccaccagatcacggagccggacacgc 1133
|||| | ||||| || || ||||| || || || ||||| ||||| ||||| |||||
Sbjct: 61 tgcgtgatgagctcgataccgtgcttggacctggtcaccaaatcactgagcctgacacct 120
Query: 1134 acaacctcccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcc 1193
|||| || || ||||| | || || ||||| ||||| || ||||| ||||||| || |
Sbjct: 121 acaagctgccttaccttaatgctgtcatcaaagagactctccggctcaggatggcgattc 180
Query: 1194 cgctgctggtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccg 1253
| ||||| || || |||||||||||||| || || ||||| || || | ||||||||||
Sbjct: 181 ctctgcttgtcccacacatgaacctccatgatgctaagcttggaggttttgacatccccg 240
Query: 1254 ccgagagcaagatcctcgtcaacgcctggtacctcgccaacaaccc 1299
|||||||||||||||| || ||||| |||| || |||||||||||
Sbjct: 241 ccgagagcaagatcctggtaaacgcatggtggcttgccaacaaccc 286
>gb|BU889586.1|BU889586 P022H08 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 596
Score = 99.7 bits (50), Expect = 3e-019
Identities = 226/285 (79%)
Strand = Plus / Plus
Query: 1015 gtggtcgatcgagtgggcggtcgctgagctggtgaaccacccggagatccagcagaagct 1074
||||||||| ||||||| | |||||||| |||||||| || || |||||| ||||| |
Sbjct: 2 gtggtcgattgagtggggaattgctgagcttgtgaaccatcctgaaatccagaagaagtt 61
Query: 1075 gcggcaggagctggacacggtgctcgggccgggccaccagatcacggagccggacacgca 1134
||| | ||||| || || ||||| || || || ||||| ||||| ||||| ||||| |
Sbjct: 62 gcgtgatgagctcgataccgtgcttggacctggtcaccaaatcactgagcctgacaccta 121
Query: 1135 caacctcccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatccc 1194
||| || || ||||| | || || ||||| ||||| || ||||| ||||||| || ||
Sbjct: 122 caagctgccttaccttaatgctgtcatcaaagagactctccggctcaggatggcgattcc 181
Query: 1195 gctgctggtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgc 1254
||||| || || |||||||||||||| || || ||||| || || | |||||||||||
Sbjct: 182 tctgcttgtcccacacatgaacctccatgatgctaagcttggaggttttgacatccccgc 241
Query: 1255 cgagagcaagatcctcgtcaacgcctggtacctcgccaacaaccc 1299
||||||||||||||| || ||||| |||| || |||||||||||
Sbjct: 242 cgagagcaagatcctggtaaacgcatggtggcttgccaacaaccc 286
Score = 54.1 bits (27), Expect = 2e-005
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 1364 gaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgccc 1422
|||||||| ||||| || ||||||||||| |||||||| ||||| | |||||||||||
Sbjct: 351 gaggccaatggcaatgatttcaggtacctccccttcggagtcgggagaaggagctgccc 409
Score = 40.2 bits (20), Expect = 0.28
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 1517 gacaccaccgagaagggaggccagttcagtctccacatcttgaagcattccaccat 1572
|||||| | ||||| || || |||||||| | ||||| |||||||||||||||||
Sbjct: 504 gacacctcagagaaaggtggacagttcagcttgcacattttgaagcattccaccat 559
>gb|AI163826.1|AI163826 A049P64U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 346
Score = 95.7 bits (48), Expect = 5e-018
Identities = 123/148 (83%)
Strand = Plus / Plus
Query: 939 agaagggtgagatcaacgaggacaacgtgctcttcatcgtcgagaacattaacgttgcag 998
||||||| |||||||||||||||||||| || | ||| || |||||||| ||||| || |
Sbjct: 129 agaagggagagatcaacgaggacaacgtcctttacattgttgagaacatcaacgtcgctg 188
Query: 999 cgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaaccacccgg 1058
| || ||||| || || |||||||||||||||| | | |||||||| |||||||| || |
Sbjct: 189 caattgagacaacactatggtcgatcgagtgggggattgctgagcttgtgaaccatcctg 248
Query: 1059 agatccagcagaagctgcggcaggagct 1086
| |||||| ||||| |||| || |||||
Sbjct: 249 aaatccagaagaagttgcgccatgagct 276
>gb|BU894988.1|BU894988 X017G06 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 697
Score = 93.7 bits (47), Expect = 2e-017
Identities = 170/211 (80%)
Strand = Plus / Plus
Query: 939 agaagggtgagatcaacgaggacaacgtgctcttcatcgtcgagaacattaacgttgcag 998
||||||| |||||||||||||||||||| || | ||| || |||||||| |||| || |
Sbjct: 484 agaagggagagatcaacgaggacaacgtcctttacattgttgagaacatcgacgtcgctg 543
Query: 999 cgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaaccacccgg 1058
| || ||||| || || |||||||||||||||| | | |||||||| |||||||| || |
Sbjct: 544 caattgagacaacactatggtcgatcgagtgggggattgctgagcttgtgaaccatcctg 603
Query: 1059 agatccagcagaagctgcggcaggagctggacacggtgctcgggccgggccaccagatca 1118
| |||||| ||||| |||| || ||||| || || |||| || || || ||||| ||||
Sbjct: 604 aaatccagaagaagttgcgccatgagctcgataccttgcttggacctggtcaccaaatca 663
Query: 1119 cggagccggacacgcacaacctcccctacct 1149
| ||||| ||||| |||| ||||| |||||
Sbjct: 664 ccgagcctgacacctacaagctcccttacct 694
>gb|BI128127.1|BI128127 G071P22Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 513
Score = 89.8 bits (45), Expect = 3e-016
Identities = 224/284 (78%)
Strand = Plus / Plus
Query: 1016 tggtcgatcgagtgggcggtcgctgagctggtgaaccacccggagatccagcagaagctg 1075
|||||||||||||||| | | |||||||| |||||||| || || |||||| ||||| ||
Sbjct: 26 tggtcgatcgagtgggggattgctgagcttgtgaaccatcctgaaatccagaagaagttg 85
Query: 1076 cggcaggagctggacacggtgctcgggccgggccaccagatcacggagccggacacgcac 1135
|| || ||||| || || |||| || || || ||||| ||||| ||||| ||||| ||
Sbjct: 86 cgccatgagctcgataccttgcttggacctggtcaccaaatcaccgagcctgacacctac 145
Query: 1136 aacctcccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccg 1195
|| ||||| ||||| | || || |||| ||||| || || || ||||||| || ||
Sbjct: 146 aagctcccttaccttaacgctgttgtcaaagagaccctccgactcaggatggcaattcct 205
Query: 1196 ctgctggtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgcc 1255
|| || || || ||||||||||| || || |||||||| || || | ||||| || ||
Sbjct: 206 ctacttgtcccacacatgaaccttcatgatgccaagcttggaggctttgacattccagct 265
Query: 1256 gagagcaagatcctcgtcaacgcctggtacctcgccaacaaccc 1299
|||||||||||| | ||||||||||||| ||||||||||||||
Sbjct: 266 gagagcaagatcttggtcaacgcctggtggctcgccaacaaccc 309
Score = 48.1 bits (24), Expect = 0.001
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 1361 gtcgaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgc 1420
||||||||||||||||| || ||||||||||| || || || || || | |||||||||
Sbjct: 371 gtcgaggccaacggcaatgatttcaggtaccttccatttggagttgggagaaggagctgc 430
Query: 1421 cccgggat 1428
|| |||||
Sbjct: 431 cctgggat 438
>gb|BU897427.1|BU897427 X057F02 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 407
Score = 89.8 bits (45), Expect = 3e-016
Identities = 224/284 (78%)
Strand = Plus / Plus
Query: 1016 tggtcgatcgagtgggcggtcgctgagctggtgaaccacccggagatccagcagaagctg 1075
|||||||||||||||| | | |||||||| |||||||| || || |||||| ||||| ||
Sbjct: 8 tggtcgatcgagtgggggattgctgagcttgtgaaccatcctgaaatccagaagaagttg 67
Query: 1076 cggcaggagctggacacggtgctcgggccgggccaccagatcacggagccggacacgcac 1135
|| || ||||| || || |||| || || || ||||| ||||| ||||| ||||| ||
Sbjct: 68 cgccatgagctcgataccttgcttggacctggtcaccaaatcaccgagcctgacacctac 127
Query: 1136 aacctcccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccg 1195
|| ||||| ||||| | || || |||| ||||| || || || ||||||| || ||
Sbjct: 128 aagctcccttaccttaacgctgttgtcaaagagaccctccgactcaggatggcaattcct 187
Query: 1196 ctgctggtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgcc 1255
|| || || || ||||||||||| || || |||||||| || || | ||||| || ||
Sbjct: 188 ctacttgtcccacacatgaaccttcatgatgccaagcttggaggctttgacattccagct 247
Query: 1256 gagagcaagatcctcgtcaacgcctggtacctcgccaacaaccc 1299
|||||||||||| | ||||||||||||| ||||||||||||||
Sbjct: 248 gagagcaagatcttggtcaacgcctggtggctcgccaacaaccc 291
Score = 48.1 bits (24), Expect = 0.001
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1361 gtcgaggccaacggcaacgacttcaggtacct 1392
||||||||||||||||| || |||||||||||
Sbjct: 353 gtcgaggccaacggcaatgatttcaggtacct 384
>dbj|D82812.1|POPCYP73AA Populus kitakamiensis cyp73a gene for cinnamic acid 4-hydroxylase,
complete cds
Length = 5167
Score = 89.8 bits (45), Expect = 3e-016
Identities = 224/284 (78%)
Strand = Plus / Plus
Query: 1016 tggtcgatcgagtgggcggtcgctgagctggtgaaccacccggagatccagcagaagctg 1075
|||||||||||||||| | | |||||||| |||||||| || || |||||| ||||| ||
Sbjct: 4491 tggtcgatcgagtgggggattgctgagcttgtgaaccatcctgaaatccagaagaagttg 4550
Query: 1076 cggcaggagctggacacggtgctcgggccgggccaccagatcacggagccggacacgcac 1135
|| || ||||| || || |||| || || || ||||| ||||| ||||| ||||| ||
Sbjct: 4551 cgccatgagctcgataccttgcttggacctggtcaccaaatcaccgagcctgacacctac 4610
Query: 1136 aacctcccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccg 1195
|| ||||| ||||| | || || |||| ||||| || || || ||||||| || ||
Sbjct: 4611 aagctcccttaccttaacgctgttgtcaaagagaccctccgactcaggatggcaattcct 4670
Query: 1196 ctgctggtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgcc 1255
|| || || || ||||||||||| || || |||||||| || || | ||||| || ||
Sbjct: 4671 ctacttgtcccacacatgaaccttcatgatgccaagcttggaggctttgacattccagct 4730
Query: 1256 gagagcaagatcctcgtcaacgcctggtacctcgccaacaaccc 1299
|||||||||||| | ||||||||||||| ||||||||||||||
Sbjct: 4731 gagagcaagatcttggtcaacgcctggtggctcgccaacaaccc 4774
Score = 54.1 bits (27), Expect = 2e-005
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 939 agaagggtgagatcaacgaggacaacgtgctcttcatcgtcgagaacattaacgt 993
||||||| |||||||||||||||||||| || | ||| || |||||||| |||||
Sbjct: 3917 agaagggagagatcaacgaggacaacgtcctttacattgttgagaacatcaacgt 3971
Score = 48.1 bits (24), Expect = 0.001
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 1361 gtcgaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgc 1420
||||||||||||||||| || ||||||||||| || || || || || | |||||||||
Sbjct: 4836 gtcgaggccaacggcaatgatttcaggtaccttccatttggagttgggagaaggagctgc 4895
Query: 1421 cccgggat 1428
|| |||||
Sbjct: 4896 cctgggat 4903
>gb|CF229348.1|CF229348 PtaXM0024D12D1208 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 747
Score = 87.8 bits (44), Expect = 1e-015
Identities = 169/211 (80%)
Strand = Plus / Plus
Query: 939 agaagggtgagatcaacgaggacaacgtgctcttcatcgtcgagaacattaacgttgcag 998
||||||| |||||||||||||||||||| || | ||| || |||||||| ||||| || |
Sbjct: 425 agaagggagagatcaacgaggacaacgtcctgtacattgttgagaacatcaacgtcgctg 484
Query: 999 cgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaaccacccgg 1058
| || ||||| || || |||||||||||||||| | | |||||||| |||||||| || |
Sbjct: 485 caattgagacaacactatggtcgatcgagtgggggattgctgagcttgtgaaccatcctg 544
Query: 1059 agatccagcagaagctgcggcaggagctggacacggtgctcgggccgggccaccagatca 1118
| ||||| ||||| |||| || || || || || |||| || || || ||||| ||||
Sbjct: 545 aaatccaaaagaagttgcgccatganctcgataccttgcttggacctggtcaccaaatca 604
Query: 1119 cggagccggacacgcacaacctcccctacct 1149
| ||||| ||||| |||| ||||| |||||
Sbjct: 605 ccgagcctgacacctacaagctcccttacct 635
>gb|CK088430.1|CK088430 A052P60.3pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A052P60 3', mRNA sequence
Length = 838
Score = 87.8 bits (44), Expect = 1e-015
Identities = 236/299 (78%), Gaps = 1/299 (0%)
Strand = Plus / Minus
Query: 1001 atcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaaccacccggag 1060
|||||||| || ||||||||||| ||||||| | |||||||| |||||||| | |
Sbjct: 805 atcgagacaacactgtggtcgat-gagtgggaaattgctgagcttgtgaaccattcctaa 747
Query: 1061 atccagcagaagctgcggcaggagctggacacggtgctcgggccgggccaccagatcacg 1120
|||||| ||||| |||| | ||||| || || ||||| || || || ||||| |||||
Sbjct: 746 atccagaagaagttgcgtgatgagctcgataccgtgcttggacctggtcaccaaatcact 687
Query: 1121 gagccggacacgcacaacctcccctacctgcaggcggtgatcaaggagacgctgcggctg 1180
||||| ||||| |||| || || ||||| | || || ||||| ||||| || |||||
Sbjct: 686 gagcctgacacctacaagctgccttaccttaatgctgtcatcaaagagactctccggctc 627
Query: 1181 cggatggccatcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcggn 1240
||||||| || || ||||| || || |||||||||||||| || || ||||| || ||
Sbjct: 626 aggatggcgattcctctgcttgtcccacacatgaacctccatgatgctaagcttggaggt 567
Query: 1241 tacgacatccccgccgagagcaagatcctcgtcaacgcctggtacctcgccaacaaccc 1299
| |||||||||||||||||||||||||| || ||||| |||| || |||||||||||
Sbjct: 566 tttgacatccccgccgagagcaagatcctggtaaacgcatggtggcttgccaacaaccc 508
Score = 54.1 bits (27), Expect = 2e-005
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 1364 gaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgccc 1422
|||||||| ||||| || ||||||||||| |||||||| ||||| | |||||||||||
Sbjct: 443 gaggccaatggcaatgatttcaggtacctccccttcggagtcgggagaaggagctgccc 385
Score = 40.2 bits (20), Expect = 0.28
Identities = 47/56 (83%)
Strand = Plus / Minus
Query: 1517 gacaccaccgagaagggaggccagttcagtctccacatcttgaagcattccaccat 1572
|||||| | ||||| || || |||||||| | ||||| |||||||||||||||||
Sbjct: 290 gacacctcagagaaaggtggacagttcagcttgcacattttgaagcattccaccat 235
>gb|DT515451.1|DT515451 WS02427.B21_J14 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02427_J14 3', mRNA sequence
Length = 866
Score = 85.8 bits (43), Expect = 5e-015
Identities = 226/287 (78%)
Strand = Plus / Minus
Query: 947 gagatcaacgaggacaacgtgctcttcatcgtcgagaacattaacgttgcagcgatcgag 1006
|||||||||||||||||||| || | ||| || |||||||| ||||| || || || |||
Sbjct: 733 gagatcaacgaggacaacgttctttacattgttgagaacatcaacgtcgctgcaattgag 674
Query: 1007 accacgctgtggtcgatcgagtgggcggtcgctgagctggtgaaccacccggagatccag 1066
|| || || |||||||||||||||| | |||||||| |||||||| || || ||||||
Sbjct: 673 acaacactatggtcgatcgagtggggaattgctgagcttgtgaaccatcctgaaatccag 614
Query: 1067 cagaagctgcggcaggagctggacacggtgctcgggccgggccaccagatcacggagccg 1126
||||| |||| || ||||| || || |||| || || || ||||| ||||| |||||
Sbjct: 613 aagaagttgcgccatgagctcgataccttgcttggacctggtcaccaaatcaccgagcct 554
Query: 1127 gacacgcacaacctcccctacctgcaggcggtgatcaaggagacgctgcggctgcggatg 1186
||||| |||| ||||| ||||| | || || ||||| ||||| || || || |||||
Sbjct: 553 gacacctacaagctcccttaccttaatgctgtaatcaaagagaccctccgacttaggatg 494
Query: 1187 gccatcccgctgctggtgccgcacatgaacctccacgacgccaagct 1233
|| || || || || || || ||||||||||| || || ||||||||
Sbjct: 493 gcaattcctctacttgtcccacacatgaaccttcatgatgccaagct 447
>gb|BI129357.1|BI129357 G089P64Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 277
Score = 81.8 bits (41), Expect = 8e-014
Identities = 123/149 (82%), Gaps = 1/149 (0%)
Strand = Plus / Plus
Query: 939 agaagggtgagatcaacgaggacaacgtgctcttcatcgtcgagaacattaacgttgcag 998
||||||| |||||||||||||||||||| || | ||| || |||||||| ||||| || |
Sbjct: 124 agaagggagagatcaacgaggacaacgtcctttacattgttgagaacatcaacgtcgctg 183
Query: 999 cgatcgag-accacgctgtggtcgatcgagtgggcggtcgctgagctggtgaaccacccg 1057
| || ||| || || || |||||||||||||||| | | |||||||| |||||||| ||
Sbjct: 184 caattgaggacaacactatggtcgatcgagtgggggattgctgagcttgtgaaccatcct 243
Query: 1058 gagatccagcagaagctgcggcaggagct 1086
|| |||||| ||||| |||| || |||||
Sbjct: 244 gaaatccagaagaagttgcgccatgagct 272
>gb|BI129799.1|BI129799 G095P72Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 373
Score = 81.8 bits (41), Expect = 8e-014
Identities = 149/185 (80%)
Strand = Plus / Plus
Query: 947 gagatcaacgaggacaacgtgctcttcatcgtcgagaacattaacgttgcagcgatcgag 1006
|||||||| ||||||||||| || | ||| || |||||||| || ||||| || ||||||
Sbjct: 122 gagatcaatgaggacaacgttctttacattgtggagaacatcaatgttgctgcaatcgag 181
Query: 1007 accacgctgtggtcgatcgagtgggcggtcgctgagctggtgaaccacccggagatccag 1066
|| || ||||||||||| ||||||| | |||||||| |||||||| || || ||||||
Sbjct: 182 acaacactgtggtcgattgagtggggaattgctgagcttgtgaaccatcctgaaatccag 241
Query: 1067 cagaagctgcggcaggagctggacacggtgctcgggccgggccaccagatcacggagccg 1126
||||| |||| | ||||| || || ||||| || || || ||||| ||||| |||||
Sbjct: 242 aagaagttgcgtgatgagctcgataccgtgcttggacctggtcaccaaatcactgagcct 301
Query: 1127 gacac 1131
|||||
Sbjct: 302 gacac 306
>gb|CF234113.1|CF234113 PtaJXO2F8F0812 Poplar cDNA library from young opposite xylem Populus
alba x Populus tremula cDNA 5', mRNA sequence
Length = 663
Score = 81.8 bits (41), Expect = 8e-014
Identities = 211/268 (78%)
Strand = Plus / Plus
Query: 1016 tggtcgatcgagtgggcggtcgctgagctggtgaaccacccggagatccagcagaagctg 1075
|||||||| ||||||| | |||||||| |||||||| || || |||||| ||||| ||
Sbjct: 11 tggtcgattgagtggggaattgctgagcttgtgaaccatcctgaaatccagaagaagttg 70
Query: 1076 cggcaggagctggacacggtgctcgggccgggccaccagatcacggagccggacacgcac 1135
|| | ||||| || || ||||| || || || ||||| ||||| ||||| ||||| ||
Sbjct: 71 cgtgatgagctcgataccgtgcttggacctggtcaccaaatcactgagcctgacacctac 130
Query: 1136 aacctcccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccg 1195
|| || || ||||| | || || ||||| ||||| || || || ||||||| || ||
Sbjct: 131 aagctgccttaccttaatgctgtcatcaaagagactctccgactcaggatggcgattcct 190
Query: 1196 ctgctggtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgcc 1255
||||| || || |||||||||||||| || || ||||| || || | ||||||||||||
Sbjct: 191 ctgcttgtcccacacatgaacctccatgatgctaagcttggaggttttgacatccccgcc 250
Query: 1256 gagagcaagatcctcgtcaacgcctggt 1283
|||||||||||||| || ||||| ||||
Sbjct: 251 gagagcaagatcctggtaaacgcatggt 278
Score = 46.1 bits (23), Expect = 0.005
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 1364 gaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgccc 1422
|||||||| ||||| || ||||||||||| ||||| || ||||| | |||||||||||
Sbjct: 359 gaggccaatggcaatgatttcaggtacctcccctttggagtcgggagaaggagctgccc 417
>gb|CF235170.1|CF235170 PtaJXT0019F5F0511 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 655
Score = 81.8 bits (41), Expect = 8e-014
Identities = 223/284 (78%)
Strand = Plus / Plus
Query: 1016 tggtcgatcgagtgggcggtcgctgagctggtgaaccacccggagatccagcagaagctg 1075
|||||||||||||||| | | |||||||| |||||||| || || |||||| ||||| ||
Sbjct: 1 tggtcgatcgagtgggggattgctgagcttgtgaaccatcctgaaatccagaagaagttg 60
Query: 1076 cggcaggagctggacacggtgctcgggccgggccaccagatcacggagccggacacgcac 1135
|| || ||||| || || |||| || || || ||||| ||||| ||||| ||||| ||
Sbjct: 61 cgccatgagctcgataccttgcttggacctggtcaccaaatcaccgagcctgacacctac 120
Query: 1136 aacctcccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccg 1195
|| ||||| ||||| | || || |||| ||||| || || || ||||||| || ||
Sbjct: 121 aagctcccttaccttaacgctgttgtcaaagagaccctccgactcaggatggcaattcct 180
Query: 1196 ctgctggtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgcc 1255
|| || || || ||||||||||| || || |||||||| || || | ||||| || ||
Sbjct: 181 ctacttgtcccacacatgaaccttcatgatgccaagcttggaggctttgacattccagct 240
Query: 1256 gagagcaagatcctcgtcaacgcctggtacctcgccaacaaccc 1299
|||||||||||| | ||||| ||||||| ||||||||||||||
Sbjct: 241 gagagcaagatcttggtcaatgcctggtggctcgccaacaaccc 284
Score = 40.2 bits (20), Expect = 0.28
Identities = 56/68 (82%)
Strand = Plus / Plus
Query: 1361 gtcgaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgc 1420
||||||||||| ||||| || ||||||||||| || || || || || | |||||||||
Sbjct: 346 gtcgaggccaatggcaatgatttcaggtaccttccatttggagttgggagaaggagctgc 405
Query: 1421 cccgggat 1428
|| |||||
Sbjct: 406 cctgggat 413
>gb|CV229053.1|CV229053 WS01912.B21_B10 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01912_B10 3', mRNA sequence
Length = 494
Score = 79.8 bits (40), Expect = 3e-013
Identities = 115/140 (82%)
Strand = Plus / Minus
Query: 947 gagatcaacgaggacaacgtgctcttcatcgtcgagaacattaacgttgcagcgatcgag 1006
|||||||||||||||||||| || | ||| || |||||||| ||||| || || || |||
Sbjct: 278 gagatcaacgaggacaacgttctttacattgttgagaacatcaacgtcgctgcaattgag 219
Query: 1007 accacgctgtggtcgatcgagtgggcggtcgctgagctggtgaaccacccggagatccag 1066
|| || || |||||||||||||||| | |||||||| |||||||| || || ||||||
Sbjct: 218 acaacactatggtcgatcgagtggggaattgctgagcttgtgaaccatcctgaaatccag 159
Query: 1067 cagaagctgcggcaggagct 1086
||||| |||| || |||||
Sbjct: 158 aagaagttgcgccatgagct 139
Score = 38.2 bits (19), Expect = 1.1
Identities = 40/47 (85%)
Strand = Plus / Minus
Query: 833 ctcttcaaggatttcttcctcgaggagaggaagaagctggcgagcac 879
||||||||||| | ||| |||| ||||||||||| || ||||||||
Sbjct: 392 ctcttcaaggactactttgtcgatgagaggaagaaacttgcgagcac 346
>gb|CV240107.1|CV240107 WS0234.B21_G24 PT-MB-A-13 Populus trichocarpa cDNA clone WS0234_G24
3', mRNA sequence
Length = 683
Score = 77.9 bits (39), Expect = 1e-012
Identities = 227/290 (78%)
Strand = Plus / Minus
Query: 980 gagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgct 1039
|||||||| ||||| || || || ||||| || || |||||||||||||||| | |||
Sbjct: 678 gagaacatcaacgtcgctgcaattgagacaacactatggtcgatcgagtggggaattgct 619
Query: 1040 gagctggtgaaccacccggagatccagcagaagctgcggcaggagctggacacggtgctc 1099
||||| |||||||| || || |||||| ||||| |||| || ||||| || || ||||
Sbjct: 618 gagcttgtgaaccatcctgaaatccagaagaagttgcgccatgagctcgataccttgctt 559
Query: 1100 gggccgggccaccagatcacggagccggacacgcacaacctcccctacctgcaggcggtg 1159
|| || || ||||| ||||| ||||| ||||| |||| ||||| ||||| | || ||
Sbjct: 558 ggacctggtcaccaaatcaccgagcctgacacctacaagctcccttaccttaatgctgta 499
Query: 1160 atcaaggagacgctgcggctgcggatggccatcccgctgctggtgccgcacatgaacctc 1219
||||| ||||| || || || ||||||| || || || || || || |||||||||||
Sbjct: 498 atcaaagagaccctccgacttaggatggcaattcctctacttgtcccacacatgaacctt 439
Query: 1220 cacgacgccaagctcggcggntacgacatccccgccgagagcaagatcct 1269
|| || |||||||| || || | |||||| || || ||||||||||||||
Sbjct: 438 catgatgccaagcttggaggcttcgacattccagctgagagcaagatcct 389
>gb|BU869348.1|BU869348 M129A09 Populus flower cDNA library Populus trichocarpa cDNA 5 prime,
mRNA sequence
Length = 646
Score = 73.9 bits (37), Expect = 2e-011
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 1208 cacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagcaagatc 1267
||||||||||| || || |||||||| || || | |||||| || || ||||||||||||
Sbjct: 101 cacatgaaccttcatgatgccaagcttggaggcttcgacattccagctgagagcaagatc 160
Query: 1268 ctcgtcaacgcctggtacctcgccaacaaccc 1299
|| ||||| ||||||| ||||||||||||||
Sbjct: 161 ctggtcaatgcctggtggctcgccaacaaccc 192
>gb|CA821732.1|CA821732 RSH06G02 two-month-old roots from clone 'Beaupre' grown for 19 days
under restricted irrigation Populus trichocarpa x Populus
deltoides cDNA 5', mRNA sequence
Length = 607
Score = 73.9 bits (37), Expect = 2e-011
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 1208 cacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagcaagatc 1267
||||||||||| || || |||||||| || || | |||||| || || ||||||||||||
Sbjct: 77 cacatgaaccttcatgatgccaagcttggaggcttcgacattccagctgagagcaagatc 136
Query: 1268 ctcgtcaacgcctggtacctcgccaacaaccc 1299
|| ||||| ||||||| ||||||||||||||
Sbjct: 137 ctggtcaatgcctggtggctcgccaacaaccc 168
>gb|CV250349.1|CV250349 WS0113.B21_E16 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0113_E16
3', mRNA sequence
Length = 686
Score = 73.9 bits (37), Expect = 2e-011
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 1208 cacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagcaagatc 1267
||||||||||| || || |||||||| || || | |||||| || || ||||||||||||
Sbjct: 616 cacatgaaccttcatgatgccaagcttggaggcttcgacattccagctgagagcaagatc 557
Query: 1268 ctcgtcaacgcctggtacctcgccaacaaccc 1299
|| ||||| ||||||| ||||||||||||||
Sbjct: 556 ctggtcaatgcctggtggctcgccaacaaccc 525
>gb|CV273950.1|CV273950 WS01712.B21_L12 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS01712_L12 3', mRNA sequence
Length = 800
Score = 73.9 bits (37), Expect = 2e-011
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 1208 cacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagcaagatc 1267
||||||||||| || || |||||||| || || | |||||| || || ||||||||||||
Sbjct: 682 cacatgaaccttcatgatgccaagcttggaggcttcgacattccagctgagagcaagatc 623
Query: 1268 ctcgtcaacgcctggtacctcgccaacaaccc 1299
|| ||||| ||||||| ||||||||||||||
Sbjct: 622 ctggtcaatgcctggtggctcgccaacaaccc 591
>gb|DT479967.1|DT479967 WS02527.BR_I09 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02527_I09 5', mRNA sequence
Length = 670
Score = 73.9 bits (37), Expect = 2e-011
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 1208 cacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagcaagatc 1267
||||||||||| || || |||||||| || || | |||||| || || ||||||||||||
Sbjct: 97 cacatgaaccttcatgatgccaagcttggaggcttcgacattccagctgagagcaagatc 156
Query: 1268 ctcgtcaacgcctggtacctcgccaacaaccc 1299
|| ||||| ||||||| ||||||||||||||
Sbjct: 157 ctggtcaatgcctggtggctcgccaacaaccc 188
>gb|AI163968.1|AI163968 A052P60U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 343
Score = 69.9 bits (35), Expect = 3e-010
Identities = 89/107 (83%)
Strand = Plus / Plus
Query: 947 gagatcaacgaggacaacgtgctcttcatcgtcgagaacattaacgttgcagcgatcgag 1006
|||||||| ||||||||||| || | ||| || |||||||| || ||||| || ||||||
Sbjct: 218 gagatcaatgaggacaacgttctttacattgtggagaacatcaatgttgctgcaatcgag 277
Query: 1007 accacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|| || ||||||||||| ||||||| | |||||||| ||||||||
Sbjct: 278 acaacactgtggtcgattgagtggggaattgctgagcttgtgaacca 324
>gb|BI127493.1|BI127493 G061P41Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 537
Score = 66.0 bits (33), Expect = 5e-009
Identities = 77/92 (83%)
Strand = Plus / Plus
Query: 1208 cacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagcaagatc 1267
||||||||||| || || |||||||| || || | ||||| || || ||||||||||||
Sbjct: 153 cacatgaaccttcatgatgccaagcttggaggctttgacattccagctgagagcaagatc 212
Query: 1268 ctcgtcaacgcctggtacctcgccaacaaccc 1299
| ||||||||||||| ||||||||||||||
Sbjct: 213 ttggtcaacgcctggtggctcgccaacaaccc 244
Score = 48.1 bits (24), Expect = 0.001
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 1361 gtcgaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgc 1420
||||||||||||||||| || ||||||||||| || || || || || | |||||||||
Sbjct: 306 gtcgaggccaacggcaatgatttcaggtaccttccatttggagttgggagaaggagctgc 365
Query: 1421 cccgggat 1428
|| |||||
Sbjct: 366 cctgggat 373
>gb|BU894522.1|BU894522 X010F02 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 582
Score = 66.0 bits (33), Expect = 5e-009
Identities = 77/92 (83%)
Strand = Plus / Plus
Query: 1208 cacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagcaagatc 1267
||||||||||| || || |||||||| || || | ||||| || || ||||||||||||
Sbjct: 32 cacatgaaccttcatgatgccaagcttggaggctttgacattccagctgagagcaagatc 91
Query: 1268 ctcgtcaacgcctggtacctcgccaacaaccc 1299
| ||||||||||||| ||||||||||||||
Sbjct: 92 ttggtcaacgcctggtggctcgccaacaaccc 123
Score = 48.1 bits (24), Expect = 0.001
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 1361 gtcgaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgc 1420
||||||||||||||||| || ||||||||||| || || || || || | |||||||||
Sbjct: 158 gtcgaggccaacggcaatgatttcaggtaccttccatttggagttgggagaaggagctgc 217
Query: 1421 cccgggat 1428
|| |||||
Sbjct: 218 cctgggat 225
>gb|BU896102.1|BU896102 X035E11 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 712
Score = 66.0 bits (33), Expect = 5e-009
Identities = 77/92 (83%)
Strand = Plus / Plus
Query: 1208 cacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagcaagatc 1267
||||||||||| || || |||||||| || || | ||||| || || ||||||||||||
Sbjct: 76 cacatgaaccttcatgatgccaagcttggaggctttgacattccagctgagagcaagatc 135
Query: 1268 ctcgtcaacgcctggtacctcgccaacaaccc 1299
| ||||||||||||| ||||||||||||||
Sbjct: 136 ttggtcaacgcctggtggctcgccaacaaccc 167
Score = 48.1 bits (24), Expect = 0.001
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 1361 gtcgaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgc 1420
||||||||||||||||| || ||||||||||| || || || || || | |||||||||
Sbjct: 229 gtcgaggccaacggcaatgatttcaggtaccttccatttggagttgggagaaggagctgc 288
Query: 1421 cccgggat 1428
|| |||||
Sbjct: 289 cctgggat 296
>gb|CF228407.1|CF228407 PtaXM0012F10F1012 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 732
Score = 66.0 bits (33), Expect = 5e-009
Identities = 77/92 (83%)
Strand = Plus / Plus
Query: 1208 cacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagcaagatc 1267
||||||||||| || || |||||||| || || | ||||| || || ||||||||||||
Sbjct: 34 cacatgaaccttcatgatgccaagcttggaggctttgacattccagctgagagcaagatc 93
Query: 1268 ctcgtcaacgcctggtacctcgccaacaaccc 1299
| ||||||||||||| ||||||||||||||
Sbjct: 94 ttggtcaacgcctggtggctcgccaacaaccc 125
Score = 48.1 bits (24), Expect = 0.001
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 1361 gtcgaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgc 1420
||||||||||||||||| || ||||||||||| || || || || || | |||||||||
Sbjct: 187 gtcgaggccaacggcaatgatttcaggtaccttccatttggagttgggagaaggagctgc 246
Query: 1421 cccgggat 1428
|| |||||
Sbjct: 247 cctgggat 254
>gb|CK099290.1|CK099290 A060P68.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A060P68 5', mRNA sequence
Length = 303
Score = 66.0 bits (33), Expect = 5e-009
Identities = 77/92 (83%)
Strand = Plus / Plus
Query: 1208 cacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagcaagatc 1267
||||||||||| || || |||||||| || || | ||||| || || ||||||||||||
Sbjct: 183 cacatgaaccttcatgatgccaagcttggaggctttgacattccagctgagagcaagatc 242
Query: 1268 ctcgtcaacgcctggtacctcgccaacaaccc 1299
| ||||||||||||| ||||||||||||||
Sbjct: 243 ttggtcaacgcctggtggctcgccaacaaccc 274
>gb|CN549454.1|CN549454 GQ0242.B3_N07 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0242_N07 5', mRNA sequence
Length = 635
Score = 66.0 bits (33), Expect = 5e-009
Identities = 77/92 (83%)
Strand = Plus / Plus
Query: 1208 cacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagcaagatc 1267
||||||||||| || || |||||||| || || | |||||| || || ||||||||||||
Sbjct: 49 cacatgaaccttcatgatgccaagcttggaggcttcgacattccagctgagagcaagatc 108
Query: 1268 ctcgtcaacgcctggtacctcgccaacaaccc 1299
| ||||| ||||||| ||||||||||||||
Sbjct: 109 ttggtcaatgcctggtggctcgccaacaaccc 140
>gb|CV227812.1|CV227812 WS0168.B21_E12 PT-DX-A-7 Populus trichocarpa cDNA clone WS0168_E12
3', mRNA sequence
Length = 806
Score = 66.0 bits (33), Expect = 5e-009
Identities = 77/92 (83%)
Strand = Plus / Plus
Query: 1208 cacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagcaagatc 1267
||||||||||| || || |||||||| || || | |||||| || || ||||||||||||
Sbjct: 3 cacatgaaccttcatgatgccaagcttggaggcttcgacattccagctgagagcaagatc 62
Query: 1268 ctcgtcaacgcctggtacctcgccaacaaccc 1299
| ||||| ||||||| ||||||||||||||
Sbjct: 63 ttggtcaatgcctggtggctcgccaacaaccc 94
>gb|CV229671.1|CV229671 WS01914.B21_B05 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01914_B05 3', mRNA sequence
Length = 631
Score = 66.0 bits (33), Expect = 5e-009
Identities = 77/92 (83%)
Strand = Plus / Minus
Query: 1208 cacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagcaagatc 1267
||||||||||| || || |||||||| || || | |||||| || || ||||||||||||
Sbjct: 621 cacatgaaccttcatgatgccaagcttggaggcttcgacattccagctgagagcaagatc 562
Query: 1268 ctcgtcaacgcctggtacctcgccaacaaccc 1299
| ||||| ||||||| ||||||||||||||
Sbjct: 561 ttggtcaatgcctggtggctcgccaacaaccc 530
>gb|CV273641.1|CV273641 WS01711.B21_L02 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS01711_L02 3', mRNA sequence
Length = 738
Score = 66.0 bits (33), Expect = 5e-009
Identities = 77/92 (83%)
Strand = Plus / Minus
Query: 1208 cacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagcaagatc 1267
||||||||||| || || |||||||| || || | |||||| || || ||||||||||||
Sbjct: 603 cacatgaaccttcatgatgccaagcttggaggcttcgacattccagctgagagcaagatc 544
Query: 1268 ctcgtcaacgcctggtacctcgccaacaaccc 1299
| ||||| ||||||| ||||||||||||||
Sbjct: 543 ttggtcaatgcctggtggctcgccaacaaccc 512
>gb|CF228907.1|CF228907 PtaXM0018G6G0614 Poplar cDNA library from mature xylem Populus alba x
Populus tremula cDNA 5', mRNA sequence
Length = 703
Score = 58.0 bits (29), Expect = 1e-006
Identities = 76/92 (82%)
Strand = Plus / Plus
Query: 1208 cacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagcaagatc 1267
||||||||||| || || |||||||| || || | ||||| || || ||||||||||||
Sbjct: 66 cacatgaaccttcatgatgccaagcttggaggctttgacattccagctgagagcaagatc 125
Query: 1268 ctcgtcaacgcctggtacctcgccaacaaccc 1299
| ||||| ||||||| ||||||||||||||
Sbjct: 126 ttggtcaatgcctggtggctcgccaacaaccc 157
Score = 40.2 bits (20), Expect = 0.28
Identities = 56/68 (82%)
Strand = Plus / Plus
Query: 1361 gtcgaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgc 1420
||||||||||| ||||| || ||||||||||| || || || || || | |||||||||
Sbjct: 219 gtcgaggccaatggcaatgatttcaggtaccttccatttggagttgggagaaggagctgc 278
Query: 1421 cccgggat 1428
|| |||||
Sbjct: 279 cctgggat 286
>dbj|D82813.1|POPCYP73BB Populus kitakamiensis cyp73b gene for cinnamic acid 4-hydroxylase,
partial cds
Length = 4933
Score = 58.0 bits (29), Expect = 1e-006
Identities = 196/252 (77%)
Strand = Plus / Plus
Query: 1016 tggtcgatcgagtgggcggtcgctgagctggtgaaccacccggagatccagcagaagctg 1075
|||||||||||||||| | | |||||||| |||||||| || || |||||| ||||| ||
Sbjct: 4682 tggtcgatcgagtgggggattgctgagcttgtgaaccatcctgaaatccagaagaagttg 4741
Query: 1076 cggcaggagctggacacggtgctcgggccgggccaccagatcacggagccggacacgcac 1135
|| || ||||| || || | || || || || ||||| ||||| ||||| ||||| ||
Sbjct: 4742 cgccatgagctcgataccttacttggacctggtcaccaaatcaccgagcctgacacctac 4801
Query: 1136 aacctcccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccg 1195
|| ||||| ||||| | || || |||| ||||| || || || ||||||| || ||
Sbjct: 4802 aagctcccttaccttaacgctgttgtcaaagagaccctccgactcaggatggcaattcct 4861
Query: 1196 ctgctggtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgcc 1255
|| || || || |||||||||||||| || |||||||| || || | ||||| || ||
Sbjct: 4862 ctacttgtcccacacatgaacctccatgatgccaagcttggaggctttgacattccagct 4921
Query: 1256 gagagcaagatc 1267
||||||||||||
Sbjct: 4922 gagagcaagatc 4933
Score = 54.1 bits (27), Expect = 2e-005
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 939 agaagggtgagatcaacgaggacaacgtgctcttcatcgtcgagaacattaacgt 993
||||||| |||||||||||||||||||| || | ||| || |||||||| |||||
Sbjct: 3822 agaagggagagatcaacgaggacaacgtcctttacattgttgagaacatcaacgt 3876
>gb|BU882344.1|BU882344 UM75TG07 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 547
Score = 56.0 bits (28), Expect = 5e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 1256 gagagcaagatcctcgtcaacgcctggtacctcgccaacaaccc 1299
|||||||||||||| ||||| ||||||| ||||||||||||||
Sbjct: 1 gagagcaagatcctggtcaatgcctggtggctcgccaacaaccc 44
>gb|CF216368.1|CF216368 PT1341 Hybrid aspen xylem up-regulated Populus alba x Populus tremula
cDNA clone PT1341, mRNA sequence
Length = 167
Score = 56.0 bits (28), Expect = 5e-006
Identities = 55/63 (87%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 1208 cacatgaacctccacgac-gccaagctcggcggntacgacatccccgccgagagcaagat 1266
|||||||||||||| || || |||||||| || | |||||||||||||||||||||||
Sbjct: 108 cacatgaacctccatgatagctaagctcggaggttttgacatccccgccgagagcaagat 49
Query: 1267 cct 1269
|||
Sbjct: 48 cct 46
>gb|BI131664.1|BI131664 G124P02Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 448
Score = 54.1 bits (27), Expect = 2e-005
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 1364 gaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgccc 1422
|||||||| ||||| || ||||||||||| |||||||| ||||| | |||||||||||
Sbjct: 386 gaggccaatggcaatgatttcaggtacctccccttcggagtcgggagaaggagctgccc 328
Score = 40.2 bits (20), Expect = 0.28
Identities = 47/56 (83%)
Strand = Plus / Minus
Query: 1517 gacaccaccgagaagggaggccagttcagtctccacatcttgaagcattccaccat 1572
|||||| | ||||| || || |||||||| | ||||| |||||||||||||||||
Sbjct: 233 gacacctcagagaaaggtggacagttcagcttgcacattttgaagcattccaccat 178
>gb|BP930384.1|BP930384 BP930384 full-length enriched poplar cDNA library Populus nigra cDNA
clone PnFL1-009_E10.r 3', mRNA sequence
Length = 555
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 1256 gagagcaagatcctcgtcaacgcctggtacctcgccaacaaccc 1299
|||||||||||| | ||||| ||||||| ||||||||||||||
Sbjct: 545 gagagcaagatcttggtcaatgcctggtggctcgccaacaaccc 502
>gb|CV274997.1|CV274997 WS0175.B21_A16 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0175_A16 3', mRNA sequence
Length = 320
Score = 46.1 bits (23), Expect = 0.005
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 947 gagatcaacgaggacaacgtgctcttcatcgtcgagaacattaacgt 993
|||||||||||||||||||| || | ||| || |||||||| |||||
Sbjct: 230 gagatcaacgaggacaacgttctttacattgttgagaacatcaacgt 184
>gb|AI164359.1|AI164359 A060P68U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 300
Score = 44.1 bits (22), Expect = 0.018
Identities = 62/76 (81%)
Strand = Plus / Plus
Query: 1208 cacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagcaagatc 1267
||||||||||| || || |||||||| || || | ||||| || || ||||||||||||
Sbjct: 174 cacatgaaccttcatgatgccaagcttggaggctttgacattccagctgagagcaagatc 233
Query: 1268 ctcgtcaacgcctggt 1283
| ||||||||||||
Sbjct: 234 ttgntcaacgcctggt 249
>gb|CB833355.1|CB833355 R19B01 two-month-old roots from clone 'Beaupre' Populus trichocarpa x
Populus deltoides cDNA 5', mRNA sequence
Length = 549
Score = 44.1 bits (22), Expect = 0.018
Identities = 89/109 (81%), Gaps = 2/109 (1%)
Strand = Plus / Plus
Query: 947 gagatcaacgaggacaacgtgctcttcatcg-tcgaga-acattaacgttgcagcgatcg 1004
|||||||||||||||||||| || | ||| | | |||| |||| ||||| || || || |
Sbjct: 240 gagatcaacgaggacaacgttctttacattgttngaganacatcaacgtcgctgcaattg 299
Query: 1005 agaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|||| || || |||||||||||||||| | |||||||| ||||||||
Sbjct: 300 agacaacactatggtcgatcgagtggggaattgctgagcttgtgaacca 348
>gb|AI162374.1|AI162374 A016P55U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 595
Score = 42.2 bits (21), Expect = 0.071
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 939 agaagggtgagatcaacgaggacaacgt 966
||||||| |||| |||||||||||||||
Sbjct: 415 agaagggagagancaacgaggacaacgt 442
>gb|CK092405.1|CK092405 G082P34.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G082P34 3', mRNA sequence
Length = 355
Score = 42.2 bits (21), Expect = 0.071
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccc 1422
||||||||||| |||||||| ||||| | |||||||||||
Sbjct: 347 ttcaggtacctccccttcggagtcgggagaaggagctgccc 307
Score = 40.2 bits (20), Expect = 0.28
Identities = 47/56 (83%)
Strand = Plus / Minus
Query: 1517 gacaccaccgagaagggaggccagttcagtctccacatcttgaagcattccaccat 1572
|||||| | ||||| || || |||||||| | ||||| |||||||||||||||||
Sbjct: 212 gacacctcagagaaaggtggacagttcagcttgcacattttgaagcattccaccat 157
>gb|BI131508.1|BI131508 G121P84Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 365
Score = 40.2 bits (20), Expect = 0.28
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 1517 gacaccaccgagaagggaggccagttcagtctccacatcttgaagcattccaccat 1572
|||||| | ||||| || || |||||||| | ||||| |||||||||||||||||
Sbjct: 83 gacacctcagagaaaggtggacagttcagcttgcacattttgaagcattccaccat 138
>gb|BU816607.1|BU816607 N069C05 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 437
Score = 40.2 bits (20), Expect = 0.28
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 1517 gacaccaccgagaagggaggccagttcagtctccacatcttgaagcattccaccat 1572
|||||| | ||||| || || |||||||| | ||||| |||||||||||||||||
Sbjct: 167 gacacctcagagaaaggtggacagttcagcttgcacattttgaagcattccaccat 222
Score = 36.2 bits (18), Expect = 4.4
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 1385 aggtacctgcccttcggcgtcggccgcaggagctgccc 1422
|||||||| |||||||| ||||| | |||||||||||
Sbjct: 35 aggtacctccccttcggagtcgggagaaggagctgccc 72
>gb|BU895424.1|BU895424 X023H08 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 379
Score = 40.2 bits (20), Expect = 0.28
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 1517 gacaccaccgagaagggaggccagttcagtctccacatcttgaagcattccaccat 1572
|||||| | ||||| || || |||||||| | ||||| |||||||||||||||||
Sbjct: 98 gacacctcagagaaaggtggacagttcagcttgcacattttgaagcattccaccat 153
>gb|CA933213.1|CA933213 MTU5CS.P5.A05 Aspen stem cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 180
Score = 40.2 bits (20), Expect = 0.28
Identities = 47/56 (83%)
Strand = Plus / Minus
Query: 1517 gacaccaccgagaagggaggccagttcagtctccacatcttgaagcattccaccat 1572
|||||| | ||||| || || |||||||| | ||||| |||||||||||||||||
Sbjct: 139 gacacctcagagaaaggtggacagttcagcttgcacattttgaagcattccaccat 84
>gb|CK092172.1|CK092172 G068P87.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G068P87 3', mRNA sequence
Length = 486
Score = 40.2 bits (20), Expect = 0.28
Identities = 47/56 (83%)
Strand = Plus / Minus
Query: 1517 gacaccaccgagaagggaggccagttcagtctccacatcttgaagcattccaccat 1572
|||||| | ||||| || || |||||||| | ||||| |||||||||||||||||
Sbjct: 287 gacacctcagagaaaggtggacagttcagcttgcacattttgaagcattccaccat 232
>gb|DV463033.1|DV463033 MTUNUL1.P10.H01 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 788
Score = 40.2 bits (20), Expect = 0.28
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1068 agaagctgcggcaggagctg 1087
||||||||||||||||||||
Sbjct: 648 agaagctgcggcaggagctg 629
>gb|BI129026.1|BI129026 G084P90Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 143
Score = 38.2 bits (19), Expect = 1.1
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1550 cacatcttgaagcattccaccat 1572
||||| |||||||||||||||||
Sbjct: 20 cacattttgaagcattccaccat 42
>gb|CF237075.1|CF237075 PtajxtjxoF3F0311 Poplar cDNA library from young tension xylem Populus
alba x Populus tremula cDNA 5', mRNA sequence
Length = 274
Score = 38.2 bits (19), Expect = 1.1
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1550 cacatcttgaagcattccaccat 1572
||||| |||||||||||||||||
Sbjct: 153 cacattttgaagcattccaccat 175
>gb|AJ768114.1|AJ768114 AJ768114 Populus euphratica leaf adult Populus euphratica cDNA clone
P0000100014C03F1, mRNA sequence
Length = 437
Score = 38.2 bits (19), Expect = 1.1
Identities = 49/59 (83%)
Strand = Plus / Plus
Query: 1364 gaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgccc 1422
|||||||| ||||| || ||||||||||| ||||| || || || | |||||||||||
Sbjct: 29 gaggccaatggcaatgatttcaggtacctcccctttggagttgggagaaggagctgccc 87
>gb|CV227682.1|CV227682 WS0167.B21_O13 PT-DX-A-7 Populus trichocarpa cDNA clone WS0167_O13
3', mRNA sequence
Length = 325
Score = 38.2 bits (19), Expect = 1.1
Identities = 72/90 (80%)
Strand = Plus / Minus
Query: 1210 catgaacctccacgacgccaagctcggcggntacgacatccccgccgagagcaagatcct 1269
||||||||| || || |||||||| || || | ||||| || || ||||||||||| |
Sbjct: 227 catgaaccttcatgatgccaagcttggagggtttgacattccagctgagagcaagatttt 168
Query: 1270 cgtcaacgcctggtacctcgccaacaaccc 1299
||||| ||||||| ||| ||||||||||
Sbjct: 167 ggtcaatgcctggtggctccccaacaaccc 138
>gb|BU829384.1|BU829384 K039P74P Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 551
Score = 36.2 bits (18), Expect = 4.4
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 1346 gaggaggagaagcacgtcgagg 1367
|||||||| |||||||||||||
Sbjct: 142 gaggaggacaagcacgtcgagg 121
>gb|CA824429.1|CA824429 R41H09 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 583
Score = 36.2 bits (18), Expect = 4.4
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 683 ctcttcctccgcctcagg 700
||||||||||||||||||
Sbjct: 145 ctcttcctccgcctcagg 162
>gb|CB833300.1|CB833300 R00A06 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 731
Score = 36.2 bits (18), Expect = 4.4
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 683 ctcttcctccgcctcagg 700
||||||||||||||||||
Sbjct: 123 ctcttcctccgcctcagg 140
>gb|DT519590.1|DT519590 WS02443.B21_B06 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02443_B06 3', mRNA sequence
Length = 715
Score = 36.2 bits (18), Expect = 4.4
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 683 ctcttcctccgcctcagg 700
||||||||||||||||||
Sbjct: 711 ctcttcctccgcctcagg 694
Database: Populus_nucl_with_EST.fasta
Posted date: May 2, 2006 3:31 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 153,222
Number of Sequences: 369679
Number of extensions: 153222
Number of successful extensions: 43280
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 43074
Number of HSP's gapped (non-prelim): 187
length of query: 1794
length of database: 203,408,664
effective HSP length: 20
effective length of query: 1774
effective length of database: 196,015,084
effective search space: 347730759016
effective search space used: 347730759016
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)