BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AB021176.2.1
(1318 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BI120969.1|BI120969 F025P92Y Populus flower cDNA library... 42 0.053
gb|BI131999.1|BI131999 G129P23Y Populus cambium cDNA librar... 42 0.053
gb|BU824029.1|BU824029 UB59CPF04 Populus tremula cambium cD... 42 0.053
gb|BU826496.1|BU826496 UK121TD02 Populus apical shoot cDNA ... 42 0.053
gb|BU833133.1|BU833133 T042F06 Populus apical shoot cDNA li... 42 0.053
gb|BU881420.1|BU881420 UM62TD09 Populus flower cDNA library... 42 0.053
gb|CA932055.1|CA932055 MTU4TA.P26.D01 Aspen apex cDNA Libra... 42 0.053
gb|CB240453.1|CB240453 PopSC00437 Poplar SC cDNA library Po... 42 0.053
gb|CF230785.1|CF230785 PtaC0013A6A0602 Poplar cDNA library ... 42 0.053
gb|CF231308.1|CF231308 PtaC0019H2H0216 Poplar cDNA library ... 42 0.053
gb|CK094514.1|CK094514 I036P06.3pR Populus senescing leaves... 42 0.053
gb|CK107502.1|CK107502 UB59CPF04.5pR Populus active cambium... 42 0.053
gb|CK115410.1|CK115410 Y009D03 Populus infected leaf substr... 42 0.053
gb|CN518502.1|CN518502 GQ0092.B3_K21 GQ009 Populus trichoca... 42 0.053
gb|CN520107.1|CN520107 GQ0107.B3_A20 GQ010 Populus trichoca... 42 0.053
gb|CV235253.1|CV235253 WS01218.B21_G09 PT-GT-FL-A-3 Populus... 42 0.053
gb|CV237536.1|CV237536 WS0123.B21_C21 PT-GT-FL-A-3 Populus ... 42 0.053
gb|CV239951.1|CV239951 WS0233.B21_P08 PT-MB-A-13 Populus tr... 42 0.053
gb|CV245562.1|CV245562 WS0257.B21_M07 PT-MB-N-A-15 Populus ... 42 0.053
gb|CV261121.1|CV261121 WS02015.B21_O19 PTxN-IB-N-A-11 Popul... 42 0.053
gb|CV263908.1|CV263908 WS02023.B21_B18 PTxN-IB-N-A-11 Popul... 42 0.053
gb|CV278368.1|CV278368 WS0146.B21_D07 PTxD-IL-A-5 Populus t... 42 0.053
gb|CX169528.1|CX169528 F03_69-109_11.ab1 leaf inoculated wi... 42 0.053
gb|CX173587.1|CX173587 D03_69-118_07.ab1 leaf inoculated wi... 42 0.053
gb|CX173603.1|CX173603 A11_69-113_01.ab1 leaf inoculated wi... 42 0.053
gb|CX174614.1|CX174614 E10_69-94_10.ab1 leaf inoculated wit... 42 0.053
gb|CX174781.1|CX174781 B04_69-61_04.ab1 leaf inoculated wit... 42 0.053
gb|CX174795.1|CX174795 E02_69-102_10.ab1 leaf inoculated wi... 42 0.053
gb|CX176578.1|CX176578 E07_69-77_09.ab1 leaf inoculated wit... 42 0.053
gb|CX176812.1|CX176812 B08_69-34_04.ab1 leaf inoculated wit... 42 0.053
gb|CX656071.1|CX656071 PO02046B12 Poplar SC cDNA library Po... 42 0.053
gb|CX656205.1|CX656205 PO02048G05 Poplar SC cDNA library Po... 42 0.053
gb|CX656633.1|CX656633 PO02020G01 Poplar SC cDNA library Po... 42 0.053
gb|DN486690.1|DN486690 P052D09.3pR Populus petioles cDNA li... 42 0.053
gb|DN493388.1|DN493388 Y009D03.3pR Populus infected leaf su... 42 0.053
gb|DN497505.1|DN497505 R007B07.5pR Populus root cDNA librar... 42 0.053
gb|DN501132.1|DN501132 UM62TD09.5pR Populus female catkins ... 42 0.053
gb|DN503368.1|DN503368 Y009D03.5pR Populus infected leaf su... 42 0.053
gb|DT473606.1|DT473606 WS0123.BR_C21 PT-GT-FL-A-3 Populus t... 42 0.053
gb|DT475646.1|DT475646 WS0127.BR_M10 PT-GT-FL-A-3 Populus t... 42 0.053
gb|DT478485.1|DT478485 WS02522.BR_O14 PT-MB-N-A-15 Populus ... 42 0.053
gb|DT481047.1|DT481047 WS02530.BR_L21 PT-MB-N-A-15 Populus ... 42 0.053
gb|DT483548.1|DT483548 WS02522.B21_O14 PT-MB-N-A-15 Populus... 42 0.053
gb|DT490439.1|DT490439 WS02544.B21_P14 PT-MB-N-A-15 Populus... 42 0.053
gb|DT494216.1|DT494216 WS01117.BR_M09 PT-P-FL-A-2 Populus t... 42 0.053
gb|DT498748.1|DT498748 WS0116.BR_E01 PT-P-FL-A-2 Populus tr... 42 0.053
gb|DT506416.1|DT506416 WS0189.C21_I10 PTxD-IL-N-A-9 Populus... 42 0.053
gb|DT507220.1|DT507220 WS02417.BR_K20 PTxD-ICC-N-A-14 Popul... 42 0.053
gb|DT509333.1|DT509333 WS02423.BR_H02 PTxD-ICC-N-A-14 Popul... 42 0.053
gb|DT511862.1|DT511862 WS02417.B21_K20 PTxD-ICC-N-A-14 Popu... 42 0.053
gb|AC149298.1| Populus trichocarpa clone Pop1-021H24, compl... 42 0.053
gb|AC149485.1| Populus trichocarpa clone Pop1-69M23, comple... 42 0.053
gb|AC151955.2| Populus trichocarpa clone Pop1-041G20, compl... 42 0.053
gb|BU832105.1|BU832105 T029F09 Populus apical shoot cDNA li... 40 0.21
gb|CF236001.1|CF236001 PtaJXT0029E1E0109 Poplar cDNA librar... 40 0.21
gb|AJ779814.1|AJ779814 AJ779814 Populus euphratica root 3-6... 40 0.21
gb|CV240532.1|CV240532 WS0251.B21_K08 PT-MB-N-A-15 Populus ... 40 0.21
gb|CV242327.1|CV242327 WS02514.B21.1_M06 PT-MB-N-A-15 Popul... 40 0.21
gb|CV266277.1|CV266277 WS02029.B21_J07 PTxN-IB-N-A-11 Popul... 40 0.21
gb|CX170006.1|CX170006 G03_69-3_13.ab1 leaf inoculated with... 40 0.21
gb|DT518275.1|DT518275 WS02436.B21_L02 PTxD-ICC-N-A-14 Popu... 40 0.21
gb|DV464305.1|DV464305 MTUNUL1.P25.G12 NUL Populus fremonti... 40 0.21
>gb|BI120969.1|BI120969 F025P92Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 347
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 66 aaggagaaggagaaggagaag 86
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 60 aaggagaaggagaaggagaag 80
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 54 aaggagaaggagaaggagaag 74
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaa 209
||||||||||||||||||||
Sbjct: 72 aaggagaaggagaaggagaa 91
>gb|BI131999.1|BI131999 G129P23Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 484
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 94 aaggagaaggagaaggagaag 114
>gb|BU824029.1|BU824029 UB59CPF04 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 536
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 311 aaggagaaggagaaggagaag 331
>gb|BU826496.1|BU826496 UK121TD02 Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 611
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 11 aaggagaaggagaaggagaag 31
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 5 aaggagaaggagaaggagaag 25
>gb|BU833133.1|BU833133 T042F06 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 610
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 13 aaggagaaggagaaggagaag 33
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 7 aaggagaaggagaaggagaag 27
>gb|BU881420.1|BU881420 UM62TD09 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 606
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 155 aaggagaaggagaaggagaag 135
>gb|CA932055.1|CA932055 MTU4TA.P26.D01 Aspen apex cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 600
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 415 aaggagaaggagaaggagaag 395
>gb|CB240453.1|CB240453 PopSC00437 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PopSC00437, mRNA sequence
Length = 480
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 270 aaggagaaggagaaggagaag 290
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaa 209
||||||||||||||||||||
Sbjct: 276 aaggagaaggagaaggagaa 295
>gb|CF230785.1|CF230785 PtaC0013A6A0602 Poplar cDNA library from cambial zone Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 748
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 243 aaggagaaggagaaggagaag 263
>gb|CF231308.1|CF231308 PtaC0019H2H0216 Poplar cDNA library from cambial zone Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 684
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 193 aaggagaaggagaaggagaag 213
>gb|CK094514.1|CK094514 I036P06.3pR Populus senescing leaves cDNA library Populus tremula
cDNA clone I036P06 3', mRNA sequence
Length = 449
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 121 aaggagaaggagaaggagaag 141
>gb|CK107502.1|CK107502 UB59CPF04.5pR Populus active cambium cDNA library Populus tremula
cDNA clone UB59CPF04 5', mRNA sequence
Length = 682
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 294 aaggagaaggagaaggagaag 314
>gb|CK115410.1|CK115410 Y009D03 Populus infected leaf substracted cDNA library Populus
tremula cDNA clone Y009D03 5', mRNA sequence
Length = 476
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 216 aaggagaaggagaaggagaag 236
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaa 209
||||||||||||||||||||
Sbjct: 222 aaggagaaggagaaggagaa 241
>gb|CN518502.1|CN518502 GQ0092.B3_K21 GQ009 Populus trichocarpa x Populus deltoides cDNA
clone GQ0092_K21 5', mRNA sequence
Length = 526
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 13 aaggagaaggagaaggagaag 33
>gb|CN520107.1|CN520107 GQ0107.B3_A20 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0107_A20 5', mRNA sequence
Length = 827
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 23 aaggagaaggagaaggagaag 43
>gb|CV235253.1|CV235253 WS01218.B21_G09 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01218_G09 3', mRNA sequence
Length = 507
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 220 aaggagaaggagaaggagaag 200
>gb|CV237536.1|CV237536 WS0123.B21_C21 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0123_C21 3', mRNA sequence
Length = 390
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 285 aaggagaaggagaaggagaag 265
>gb|CV239951.1|CV239951 WS0233.B21_P08 PT-MB-A-13 Populus trichocarpa cDNA clone WS0233_P08
3', mRNA sequence
Length = 560
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 153 aaggagaaggagaaggagaag 173
>gb|CV245562.1|CV245562 WS0257.B21_M07 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0257_M07 3', mRNA sequence
Length = 731
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 196 aaggagaaggagaaggagaag 216
>gb|CV261121.1|CV261121 WS02015.B21_O19 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02015_O19 3', mRNA sequence
Length = 831
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 481 aaggagaaggagaaggagaag 461
>gb|CV263908.1|CV263908 WS02023.B21_B18 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02023_B18 3', mRNA sequence
Length = 920
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 858 aaggagaaggagaaggagaag 838
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 190 aaggagaaggagaaggagaa 209
||||||||||||||||||||
Sbjct: 852 aaggagaaggagaaggagaa 833
>gb|CV278368.1|CV278368 WS0146.B21_D07 PTxD-IL-A-5 Populus trichocarpa x Populus deltoides
cDNA clone WS0146_D07 3', mRNA sequence
Length = 582
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 577 aaggagaaggagaaggagaag 557
>gb|CX169528.1|CX169528 F03_69-109_11.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 655
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 42 aaggagaaggagaaggagaag 62
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 36 aaggagaaggagaaggagaag 56
>gb|CX173587.1|CX173587 D03_69-118_07.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 687
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 74 aaggagaaggagaaggagaag 94
>gb|CX173603.1|CX173603 A11_69-113_01.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 692
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 78 aaggagaaggagaaggagaag 58
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 72 aaggagaaggagaaggagaag 52
>gb|CX174614.1|CX174614 E10_69-94_10.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 608
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 169 aaggagaaggagaaggagaag 189
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaa 209
||||||||||||||||||||
Sbjct: 175 aaggagaaggagaaggagaa 194
>gb|CX174781.1|CX174781 B04_69-61_04.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 684
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 104 aaggagaaggagaaggagaag 84
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 98 aaggagaaggagaaggagaag 78
>gb|CX174795.1|CX174795 E02_69-102_10.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 680
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 104 aaggagaaggagaaggagaag 84
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 98 aaggagaaggagaaggagaag 78
>gb|CX176578.1|CX176578 E07_69-77_09.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 677
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 190 aaggagaaggagaaggagaag 170
>gb|CX176812.1|CX176812 B08_69-34_04.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 694
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 392 aaggagaaggagaaggagaag 372
>gb|CX656071.1|CX656071 PO02046B12 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02046B12 5', mRNA sequence
Length = 555
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 6 aaggagaaggagaaggagaag 26
>gb|CX656205.1|CX656205 PO02048G05 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02048G05 5', mRNA sequence
Length = 621
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 195 aaggagaaggagaaggagaag 215
>gb|CX656633.1|CX656633 PO02020G01 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02020G01 5', mRNA sequence
Length = 464
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 195 aaggagaaggagaaggagaag 215
>gb|DN486690.1|DN486690 P052D09.3pR Populus petioles cDNA library Populus tremula cDNA
clone P052D09 3', mRNA sequence
Length = 397
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 249 aaggagaaggagaaggagaag 269
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 191 aggagaaggagaaggagaag 210
||||||||||||||||||||
Sbjct: 244 aggagaaggagaaggagaag 263
>gb|DN493388.1|DN493388 Y009D03.3pR Populus infected leaf substracted cDNA library Populus
tremula cDNA clone Y009D03 3', mRNA sequence
Length = 432
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 222 aaggagaaggagaaggagaag 202
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 190 aaggagaaggagaaggagaa 209
||||||||||||||||||||
Sbjct: 216 aaggagaaggagaaggagaa 197
>gb|DN497505.1|DN497505 R007B07.5pR Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone R007B07 5', mRNA sequence
Length = 799
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 167 aaggagaaggagaaggagaag 187
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaa 209
||||||||||||||||||||
Sbjct: 173 aaggagaaggagaaggagaa 192
>gb|DN501132.1|DN501132 UM62TD09.5pR Populus female catkins cDNA library Populus
trichocarpa cDNA clone UM62TD09 5', mRNA sequence
Length = 707
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 155 aaggagaaggagaaggagaag 135
>gb|DN503368.1|DN503368 Y009D03.5pR Populus infected leaf substracted cDNA library Populus
tremula cDNA clone Y009D03 5', mRNA sequence
Length = 473
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 211 aaggagaaggagaaggagaag 231
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaa 209
||||||||||||||||||||
Sbjct: 217 aaggagaaggagaaggagaa 236
>gb|DT473606.1|DT473606 WS0123.BR_C21 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0123_C21 5', mRNA sequence
Length = 359
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 75 aaggagaaggagaaggagaag 95
>gb|DT475646.1|DT475646 WS0127.BR_M10 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0127_M10 5', mRNA sequence
Length = 536
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 99 aaggagaaggagaaggagaag 119
>gb|DT478485.1|DT478485 WS02522.BR_O14 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02522_O14 5', mRNA sequence
Length = 767
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 614 aaggagaaggagaaggagaag 594
>gb|DT481047.1|DT481047 WS02530.BR_L21 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02530_L21 5', mRNA sequence
Length = 863
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 145 aaggagaaggagaaggagaag 125
>gb|DT483548.1|DT483548 WS02522.B21_O14 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02522_O14 3', mRNA sequence
Length = 767
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 154 aaggagaaggagaaggagaag 174
>gb|DT490439.1|DT490439 WS02544.B21_P14 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02544_P14 3', mRNA sequence
Length = 731
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 196 aaggagaaggagaaggagaag 216
>gb|DT494216.1|DT494216 WS01117.BR_M09 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01117_M09 5', mRNA sequence
Length = 892
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 143 aaggagaaggagaaggagaag 163
>gb|DT498748.1|DT498748 WS0116.BR_E01 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0116_E01
5', mRNA sequence
Length = 653
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 10 aaggagaaggagaaggagaag 30
>gb|DT506416.1|DT506416 WS0189.C21_I10 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0189_I10 3', mRNA sequence
Length = 777
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 553 aaggagaaggagaaggagaag 533
>gb|DT507220.1|DT507220 WS02417.BR_K20 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02417_K20 5', mRNA sequence
Length = 777
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 750 aaggagaaggagaaggagaag 770
>gb|DT509333.1|DT509333 WS02423.BR_H02 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02423_H02 5', mRNA sequence
Length = 815
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 95 aaggagaaggagaaggagaag 115
>gb|DT511862.1|DT511862 WS02417.B21_K20 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02417_K20 3', mRNA sequence
Length = 642
Score = 42.1 bits (21), Expect = 0.053
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 190 aaggagaaggagaaggagaag 210
|||||||||||||||||||||
Sbjct: 96 aaggagaaggagaaggagaag 76
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 94,601
Number of Sequences: 369679
Number of extensions: 94601
Number of successful extensions: 26700
Number of sequences better than 0.5: 62
Number of HSP's better than 0.5 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 26426
Number of HSP's gapped (non-prelim): 200
length of query: 1318
length of database: 203,408,664
effective HSP length: 19
effective length of query: 1299
effective length of database: 196,384,763
effective search space: 255103807137
effective search space used: 255103807137
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)