BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 44956.2.1
(1252 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DT483632.1|DT483632 WS02523.B21_C07 PT-MB-N-A-15 Populus... 321 4e-086
gb|DT514704.1|DT514704 WS02425.B21_I19 PTxD-ICC-N-A-14 Popu... 313 9e-084
gb|DT519940.1|DT519940 WS02446.B21.1_B19 PTxD-ICC-N-A-14 Po... 313 9e-084
gb|DT514306.1|DT514306 WS02424.B21_H08 PTxD-ICC-N-A-14 Popu... 289 1e-076
gb|CK318628.1|CK318628 X9P01d12 Populus stem seasonal libra... 285 2e-075
gb|CX174164.1|CX174164 D11_69-15_07.ab1 leaf inoculated wit... 266 2e-069
gb|CX175698.1|CX175698 E10_69-98_10.ab1 leaf inoculated wit... 266 2e-069
gb|CX653926.1|CX653926 PO02009F07 Poplar SC cDNA library Po... 256 2e-066
gb|BU897759.1|BU897759 X068A03 Populus wood cDNA library Po... 236 2e-060
gb|CF229731.1|CF229731 PtaXM0028H6H0616 Poplar cDNA library... 228 4e-058
gb|DT510084.1|DT510084 WS02425.BR_I19 PTxD-ICC-N-A-14 Popul... 222 3e-056
gb|DT478567.1|DT478567 WS02523.BR_C07 PT-MB-N-A-15 Populus ... 220 1e-055
gb|CV257073.1|CV257073 WS0245.B21_J13 PTxD-ICC-N-A-14 Popul... 212 2e-053
gb|DT509700.1|DT509700 WS02424.BR_H08 PTxD-ICC-N-A-14 Popul... 190 9e-047
gb|CA928963.1|CA928963 MTU6TR.P8.H06 Aspen root cDNA Librar... 135 5e-030
gb|CK096406.1|CK096406 UB12CPH12.3pR Populus active cambium... 135 5e-030
gb|CV243485.1|CV243485 WS0252.B21_A03 PT-MB-N-A-15 Populus ... 96 4e-018
gb|BU826355.1|BU826355 UK119TF06 Populus apical shoot cDNA ... 76 4e-012
gb|BU891131.1|BU891131 P046D03 Populus petioles cDNA librar... 76 4e-012
gb|BU836527.1|BU836527 T087E04 Populus apical shoot cDNA li... 48 8e-004
gb|CV257267.1|CV257267 WS0246.B21_C14 PTxD-ICC-N-A-14 Popul... 40 0.20
>gb|DT483632.1|DT483632 WS02523.B21_C07 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02523_C07 3', mRNA sequence
Length = 885
Score = 321 bits (162), Expect = 4e-086
Identities = 498/610 (81%)
Strand = Plus / Plus
Query: 200 cttacattaccatccctccgtcaattgtaagcacctgtccagtcatatagctagctgcgg 259
||||||||||||| ||||| ||||| || | |||||||||||| || || || | ||||
Sbjct: 267 cttacattaccattcctccatcaatagtgaacacctgtccagtgatgtaactggaggcgg 326
Query: 260 ggttaagggccaggaactcgaccaaccctgcaacttcctctggttggccatatctcccta 319
| ||||| |||||||| || || | |||||||| || |||||||||||||| | || |
Sbjct: 327 gattaagagccaggaattccactagtcctgcaacctcttctggttggccataacgtccca 386
Query: 320 acggaatggttgacaagattttcttctcaagctcttctccaagttcggcagtcatatcag 379
| || || ||| |||||||||||| |||| || |||||||| | ||||||||||||||
Sbjct: 387 aagggattgtttccaagattttcttttcaatatcatctccaagcttggcagtcatatcag 446
Query: 380 atgcaatgaaccctggtgcaatagcattcacattgatatttctgcttgcatactccctgg 439
|||||||||| ||||| || | |||||| ||||| || |||||||||||||| ||| | |
Sbjct: 447 atgcaatgaatcctggggccacagcatttacattaatgtttctgcttgcatattcctttg 506
Query: 440 caactgtttttgtgaaaccaatcactccagccttggctgcgctataattagcttggccaa 499
|||| || ||||| | ||||| ||||| ||||| || || ||||| || ||||| ||
Sbjct: 507 caacagtctttgtcaggccaataactcctgcctttgcagcactatagttggcttgcccgg 566
Query: 500 cattgccagtaagaccaactacagatgcaatgttgataatttttccctttctctttttca 559
|||||||| | |||||| || ||||| ||||| ||||| ||||||||||||||||||
Sbjct: 567 cattgccaaccaaaccaacaactgatgctatgttaataatccttccctttctctttttca 626
Query: 560 tcattacttttgttgcagcctgtgtacaaaggaagacaccagtaagattcagatcaatta 619
|||| | ||| | ||| ||||||||||||||||| |||||||| ||||| |||||||| |
Sbjct: 627 tcataattttggctgctgcctgtgtacaaaggaatacaccagtgagattaagatcaataa 686
Query: 620 cgtcttgccactgagatttcttcatcctcatcaacaatgtgtctcgtgtaatccctgcat 679
| || |||||||||||||||||||| ||||||| |||||| || | |||||| |||||||
Sbjct: 687 cctcctgccactgagatttcttcattctcatcagcaatgtatcccttgtaattcctgcat 746
Query: 680 tatttaccagcacatctattgttccccatttatctagagctgctttcatcatagactcta 739
|||||| ||| | ||| | ||||||||| ||| | ||| | ||||||||| ||||| |
Sbjct: 747 tatttatcagtatatcaacggttccccatgcatcaacagcagttttcatcattgactcca 806
Query: 740 catcagcttcttttgaaacatctcctccgaaggtgatagcctcaccaccagatgcttcaa 799
||||||| |||||||||||||| || || || |||| |||| ||||||| | || ||||
Sbjct: 807 catcagcctcttttgaaacatcacccccaaaagtgagggcctgaccaccataagcctcaa 866
Query: 800 tctctttgga 809
||||||||||
Sbjct: 867 tctctttgga 876
>gb|DT514704.1|DT514704 WS02425.B21_I19 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02425_I19 3', mRNA sequence
Length = 893
Score = 313 bits (158), Expect = 9e-084
Identities = 497/610 (81%)
Strand = Plus / Plus
Query: 200 cttacattaccatccctccgtcaattgtaagcacctgtccagtcatatagctagctgcgg 259
||||||||||||| ||||| ||||| || | |||||||||||| || || || | ||||
Sbjct: 266 cttacattaccattcctccatcaatagtgaacacctgtccagtgatgtaactggaggcgg 325
Query: 260 ggttaagggccaggaactcgaccaaccctgcaacttcctctggttggccatatctcccta 319
| ||||| |||||||| || || | |||||||| || |||||||||||||| | || |
Sbjct: 326 gattaagagccaggaattccactagtcctgcaacctcttctggttggccataacgtccca 385
Query: 320 acggaatggttgacaagattttcttctcaagctcttctccaagttcggcagtcatatcag 379
| || || ||| |||||||||||| |||| || |||||||| | ||||||||||||||
Sbjct: 386 aagggattgtttccaagattttcttttcaatatcatctccaagcttggcagtcatatcag 445
Query: 380 atgcaatgaaccctggtgcaatagcattcacattgatatttctgcttgcatactccctgg 439
|||||||||| ||||| || | |||||| ||||| || |||||||||||||| ||| | |
Sbjct: 446 atgcaatgaatcctggggccacagcatttacattaatgtttctgcttgcatattcctttg 505
Query: 440 caactgtttttgtgaaaccaatcactccagccttggctgcgctataattagcttggccaa 499
|||| || ||||| | ||||| ||||| ||||| || || ||||| || ||||| ||
Sbjct: 506 caacagtctttgtcaggccaataactcctgcctttgcagcactatagttggcttgcccgg 565
Query: 500 cattgccagtaagaccaactacagatgcaatgttgataatttttccctttctctttttca 559
|||| ||| | |||||| || ||||| ||||| ||||| ||||||||||||||||||
Sbjct: 566 cattaccaaccaaaccaacaactgatgctatgttaataatccttccctttctctttttca 625
Query: 560 tcattacttttgttgcagcctgtgtacaaaggaagacaccagtaagattcagatcaatta 619
|||| | ||| | ||| ||||||||||||||||| |||||||| ||||| |||||||| |
Sbjct: 626 tcataattttggctgctgcctgtgtacaaaggaatacaccagtgagattaagatcaataa 685
Query: 620 cgtcttgccactgagatttcttcatcctcatcaacaatgtgtctcgtgtaatccctgcat 679
| || |||||||||||||||||||| ||||||| |||||| || |||||||| |||||||
Sbjct: 686 cctcctgccactgagatttcttcattctcatcagcaatgtatcccgtgtaattcctgcat 745
Query: 680 tatttaccagcacatctattgttccccatttatctagagctgctttcatcatagactcta 739
|||||| ||| | ||| | ||||||||| ||| | ||| | ||||||||| || || |
Sbjct: 746 tatttatcagtatatcaacggttccccatgcatcaacagcagttttcatcattgattcca 805
Query: 740 catcagcttcttttgaaacatctcctccgaaggtgatagcctcaccaccagatgcttcaa 799
||||||| |||||||||||||| || || || |||| |||| ||||||| | || ||||
Sbjct: 806 catcagcctcttttgaaacatcacccccaaaagtgagggcctgaccaccataagcctcaa 865
Query: 800 tctctttgga 809
||||||||||
Sbjct: 866 tctctttgga 875
>gb|DT519940.1|DT519940 WS02446.B21.1_B19 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02446_B19 3', mRNA sequence
Length = 850
Score = 313 bits (158), Expect = 9e-084
Identities = 497/610 (81%)
Strand = Plus / Plus
Query: 200 cttacattaccatccctccgtcaattgtaagcacctgtccagtcatatagctagctgcgg 259
||||||||||||| ||||| ||||| || | |||||||||||| || || || | ||||
Sbjct: 221 cttacattaccattcctccatcaatagtgaacacctgtccagtgatgtaactggaggcgg 280
Query: 260 ggttaagggccaggaactcgaccaaccctgcaacttcctctggttggccatatctcccta 319
| ||||| |||||||| || || | |||||||| || |||||||||||||| | || |
Sbjct: 281 gattaagagccaggaattccactagtcctgcaacctcttctggttggccataacgtccca 340
Query: 320 acggaatggttgacaagattttcttctcaagctcttctccaagttcggcagtcatatcag 379
| || || ||| |||||||||||| |||| || |||||||| | ||||||||||||||
Sbjct: 341 aagggattgtttccaagattttcttttcaatatcatctccaagcttggcagtcatatcag 400
Query: 380 atgcaatgaaccctggtgcaatagcattcacattgatatttctgcttgcatactccctgg 439
|||||||||| ||||| || | |||||| ||||| || |||||||||||||| ||| | |
Sbjct: 401 atgcaatgaatcctggggccacagcatttacattaatgtttctgcttgcatattcctttg 460
Query: 440 caactgtttttgtgaaaccaatcactccagccttggctgcgctataattagcttggccaa 499
|||| || ||||| | ||||| ||||| ||||| || || ||||| || ||||| ||
Sbjct: 461 caacagtctttgtcaggccaataactcctgcctttgcagcactatagttggcttgcccgg 520
Query: 500 cattgccagtaagaccaactacagatgcaatgttgataatttttccctttctctttttca 559
|||| ||| | |||||| || ||||| ||||| ||||| ||||||||||||||||||
Sbjct: 521 cattaccaaccaaaccaacaactgatgctatgttaataatccttccctttctctttttca 580
Query: 560 tcattacttttgttgcagcctgtgtacaaaggaagacaccagtaagattcagatcaatta 619
|||| | ||| | ||| ||||||||||||||||| |||||||| ||||| |||||||| |
Sbjct: 581 tcataattttggctgctgcctgtgtacaaaggaatacaccagtgagattaagatcaataa 640
Query: 620 cgtcttgccactgagatttcttcatcctcatcaacaatgtgtctcgtgtaatccctgcat 679
| || |||||||||||||||||||| ||||||| |||||| || |||||||| |||||||
Sbjct: 641 cctcctgccactgagatttcttcattctcatcagcaatgtatcccgtgtaattcctgcat 700
Query: 680 tatttaccagcacatctattgttccccatttatctagagctgctttcatcatagactcta 739
|||||| ||| | ||| | ||||||||| ||| | ||| | ||||||||| || || |
Sbjct: 701 tatttatcagtatatcaacggttccccatgcatcaacagcagttttcatcattgattcca 760
Query: 740 catcagcttcttttgaaacatctcctccgaaggtgatagcctcaccaccagatgcttcaa 799
||||||| |||||||||||||| || || || |||| |||| ||||||| | || ||||
Sbjct: 761 catcagcctcttttgaaacatcacccccaaaagtgagggcctgaccaccataagcctcaa 820
Query: 800 tctctttgga 809
||||||||||
Sbjct: 821 tctctttgga 830
>gb|DT514306.1|DT514306 WS02424.B21_H08 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02424_H08 3', mRNA sequence
Length = 800
Score = 289 bits (146), Expect = 1e-076
Identities = 401/486 (82%)
Strand = Plus / Plus
Query: 200 cttacattaccatccctccgtcaattgtaagcacctgtccagtcatatagctagctgcgg 259
||||||||||||| ||||| ||||| || | |||||||||||| || || || | ||||
Sbjct: 267 cttacattaccattcctccatcaatagtgaacacctgtccagtgatgtaactggaggcgg 326
Query: 260 ggttaagggccaggaactcgaccaaccctgcaacttcctctggttggccatatctcccta 319
| ||||| |||||||| || || | |||||||| || |||||||||||||| | || |
Sbjct: 327 gattaagagccaggaattccactagtcctgcaacctcttctggttggccataacgtccca 386
Query: 320 acggaatggttgacaagattttcttctcaagctcttctccaagttcggcagtcatatcag 379
| || || ||| |||||||||||| |||| || |||||||| | ||||||||||||||
Sbjct: 387 aagggattgtttccaagattttcttttcaatatcatctccaagcttggcagtcatatcag 446
Query: 380 atgcaatgaaccctggtgcaatagcattcacattgatatttctgcttgcatactccctgg 439
|||||||||| ||||| || | |||||| ||||| || |||||||||||||| ||| | |
Sbjct: 447 atgcaatgaatcctggggccacagcatttacattaatgtttctgcttgcatattcctttg 506
Query: 440 caactgtttttgtgaaaccaatcactccagccttggctgcgctataattagcttggccaa 499
|||| || ||||| | ||||| ||||| ||||| || || ||||| || ||||| ||
Sbjct: 507 caacagtctttgtcaggccaataactcctgcctttgcagcactatagttggcttgcccgg 566
Query: 500 cattgccagtaagaccaactacagatgcaatgttgataatttttccctttctctttttca 559
|||||||| | |||||| || ||||| ||||| ||||| ||||||||||||||||||
Sbjct: 567 cattgccaaccaaaccaacaactgatgctatgttaataatccttccctttctctttttca 626
Query: 560 tcattacttttgttgcagcctgtgtacaaaggaagacaccagtaagattcagatcaatta 619
|||| | ||| | ||| ||||||||||||||||| |||||||| ||||| |||||||| |
Sbjct: 627 tcataattttggctgctgcctgtgtacaaaggaatacaccagtgagattaagatcaataa 686
Query: 620 cgtcttgccactgagatttcttcatcctcatcaacaatgtgtctcgtgtaatccctgcat 679
| || |||||||||||||||||||| |||||||||||||| || |||||||| |||||||
Sbjct: 687 cctcctgccactgagatttcttcattctcatcaacaatgtatcccgtgtaattcctgcat 746
Query: 680 tattta 685
||||||
Sbjct: 747 tattta 752
>gb|CK318628.1|CK318628 X9P01d12 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 760
Score = 285 bits (144), Expect = 2e-075
Identities = 441/540 (81%)
Strand = Plus / Minus
Query: 333 caagattttcttctcaagctcttctccaagttcggcagtcatatcagatgcaatgaaccc 392
|||||||||||| |||| || |||||||| | || ||||||||||||||||||||| ||
Sbjct: 726 caagattttcttttcaatgtcatctccaagcttggaagtcatatcagatgcaatgaatcc 667
Query: 393 tggtgcaatagcattcacattgatatttctgcttgcatactccctggcaactgtttttgt 452
||| |||| |||||| ||||| ||||||||||||||||| ||| | ||||| || |||||
Sbjct: 666 tggggcaacagcatttacattaatatttctgcttgcatattcctttgcaacagtctttgt 607
Query: 453 gaaaccaatcactccagccttggctgcgctataattagcttggccaacattgccagtaag 512
| ||||| || || ||||| || || ||||| || ||||| |||||||||||| |
Sbjct: 606 caggccaataacacctgcctttgcagcactatagttggcttgcccaacattgccaaccaa 547
Query: 513 accaactacagatgcaatgttgataatttttccctttctctttttcatcattacttttgt 572
|||||| || ||||| ||||| ||||| |||||||||||||||||||||| | ||| |
Sbjct: 546 accaacaactgatgctatgttaataatccttccctttctctttttcatcataattttggc 487
Query: 573 tgcagcctgtgtacaaaggaagacaccagtaagattcagatcaattacgtcttgccactg 632
||| ||||| || || ||||| ||||| || |||||||||||||| || || ||||||||
Sbjct: 486 tgccgcctgcgtgcagaggaatacacctgtgagattcagatcaataacctcctgccactg 427
Query: 633 agatttcttcatcctcatcaacaatgtgtctcgtgtaatccctgcattatttaccagcac 692
|||||||||||| |||||||||||||| || |||||||| ||||||||||||| ||| |
Sbjct: 426 agatttcttcattctcatcaacaatgtatcccgtgtaattcctgcattatttatcagtat 367
Query: 693 atctattgttccccatttatctagagctgctttcatcatagactctacatcagcttcttt 752
||| | ||||||||| ||| | ||| | ||||||||| || || |||||||| |||||
Sbjct: 366 atcaacagttccccatgcatcaacagcagttttcatcattgattccacatcagcctcttt 307
Query: 753 tgaaacatctcctccgaaggtgatagcctcaccaccagatgcttcaatctctttggagac 812
||| ||||| || || || |||| |||| |||||| | || || ||||||||||| ||
Sbjct: 306 tgagacatcacccccaaaagtgagggcctggccaccataagcctcgatctctttggaaac 247
Query: 813 ctcttcagcctctttcgaggaccgggcatagtttaccagaaccttgcatcctgcttttcc 872
|| ||||| || || || |||| ||||| ||||||| |||||||| |||||||||||
Sbjct: 246 ttcctcagcttcctttgatgacctagcataatttaccaagaccttgcaacctgcttttcc 187
>gb|CX174164.1|CX174164 D11_69-15_07.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 652
Score = 266 bits (134), Expect = 2e-069
Identities = 398/486 (81%)
Strand = Plus / Minus
Query: 200 cttacattaccatccctccgtcaattgtaagcacctgtccagtcatatagctagctgcgg 259
||||||||||||| ||||| ||||| || | |||||||||||| || || || | ||||
Sbjct: 531 cttacattaccattcctccatcaatagtgaacacctgtccagtgatgtaactggaggcgg 472
Query: 260 ggttaagggccaggaactcgaccaaccctgcaacttcctctggttggccatatctcccta 319
| ||||| |||||||| || || | |||||||| || |||||||||||||| | || |
Sbjct: 471 gattaagagccaggaattccactagtcctgcaacctcttctggttggccataacgtccca 412
Query: 320 acggaatggttgacaagattttcttctcaagctcttctccaagttcggcagtcatatcag 379
| || || ||| |||||||||||| |||| || |||||||| | ||||||||||||||
Sbjct: 411 aagggattgtttccaagattttcttttcaatatcatctccaagcttggcagtcatatcag 352
Query: 380 atgcaatgaaccctggtgcaatagcattcacattgatatttctgcttgcatactccctgg 439
|||||||||| ||||| || | |||||| ||||| || |||||||||||||| ||| | |
Sbjct: 351 atgcaatgaatcctggggccacagcatttacattaatgtttctgcttgcatattcctttg 292
Query: 440 caactgtttttgtgaaaccaatcactccagccttggctgcgctataattagcttggccaa 499
|||| || ||||| | ||||| ||||| ||||| || || ||||| || ||||| ||
Sbjct: 291 caacagtctttgtcaggccaataactcctgcctttgcagcactatagttggcttgtccgg 232
Query: 500 cattgccagtaagaccaactacagatgcaatgttgataatttttccctttctctttttca 559
|||||||| | |||||| || ||||| ||||| ||||| ||||||||||||||||||
Sbjct: 231 cattgccaaccaaaccaacaactgatgctatgttaataatccttccctttctctttttca 172
Query: 560 tcattacttttgttgcagcctgtgtacaaaggaagacaccagtaagattcagatcaatta 619
|||| | ||| | ||| ||||||||||||||||| |||||||| ||||| ||||||| |
Sbjct: 171 tcataattttggctgctgcctgtgtacaaaggaatacaccagtgagattaagatcaacaa 112
Query: 620 cgtcttgccactgagatttcttcatcctcatcaacaatgtgtctcgtgtaatccctgcat 679
| || |||||||||||||||||||| ||||||| || ||| || |||||||| |||||||
Sbjct: 111 cctcctgccactgagatttcttcattctcatcagcagtgtatcccgtgtaattcctgcat 52
Query: 680 tattta 685
||||||
Sbjct: 51 tattta 46
>gb|CX175698.1|CX175698 E10_69-98_10.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 630
Score = 266 bits (134), Expect = 2e-069
Identities = 398/486 (81%)
Strand = Plus / Minus
Query: 200 cttacattaccatccctccgtcaattgtaagcacctgtccagtcatatagctagctgcgg 259
||||||||||||| ||||| ||||| || | |||||||||||| || || || | ||||
Sbjct: 513 cttacattaccattcctccatcaatagtgaacacctgtccagtgatgtaactggaggcgg 454
Query: 260 ggttaagggccaggaactcgaccaaccctgcaacttcctctggttggccatatctcccta 319
| ||||| |||||||| || || | |||||||| || |||||||||||||| | || |
Sbjct: 453 gattaagagccaggaattccactagtcctgcaacctcttctggttggccataacgtccca 394
Query: 320 acggaatggttgacaagattttcttctcaagctcttctccaagttcggcagtcatatcag 379
| || || ||| |||||||||||| |||| || |||||||| | ||||||||||||||
Sbjct: 393 aagggattgtttccaagattttcttttcaatatcatctccaagcttggcagtcatatcag 334
Query: 380 atgcaatgaaccctggtgcaatagcattcacattgatatttctgcttgcatactccctgg 439
|||||||||| ||||| || | |||||| ||||| || |||||||||||||| ||| | |
Sbjct: 333 atgcaatgaatcctggggccacagcatttacattaatgtttctgcttgcatattcctttg 274
Query: 440 caactgtttttgtgaaaccaatcactccagccttggctgcgctataattagcttggccaa 499
|||| || ||||| | ||||| ||||| ||||| || || ||||| || ||||| ||
Sbjct: 273 caacagtctttgtcaggccaataactcctgcctttgcagcactatagttggcttgtccgg 214
Query: 500 cattgccagtaagaccaactacagatgcaatgttgataatttttccctttctctttttca 559
|||||||| | |||||| || ||||| ||||| ||||| ||||||||||||||||||
Sbjct: 213 cattgccaaccaaaccaacaactgatgctatgttaataatccttccctttctctttttca 154
Query: 560 tcattacttttgttgcagcctgtgtacaaaggaagacaccagtaagattcagatcaatta 619
|||| | ||| | ||| ||||||||||||||||| |||||||| ||||| ||||||| |
Sbjct: 153 tcataattttggctgctgcctgtgtacaaaggaatacaccagtgagattaagatcaacaa 94
Query: 620 cgtcttgccactgagatttcttcatcctcatcaacaatgtgtctcgtgtaatccctgcat 679
| || |||||||||||||||||||| ||||||| || ||| || |||||||| |||||||
Sbjct: 93 cctcctgccactgagatttcttcattctcatcagcagtgtatcccgtgtaattcctgcat 34
Query: 680 tattta 685
||||||
Sbjct: 33 tattta 28
>gb|CX653926.1|CX653926 PO02009F07 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02009F07 5', mRNA sequence
Length = 622
Score = 256 bits (129), Expect = 2e-066
Identities = 390/477 (81%)
Strand = Plus / Minus
Query: 200 cttacattaccatccctccgtcaattgtaagcacctgtccagtcatatagctagctgcgg 259
||||||| ||||| ||||| || || || | |||||||||||| || || || | ||||
Sbjct: 477 cttacatcaccattcctccatcgatagtcaacacctgtccagtgatgtaactggaagcgg 418
Query: 260 ggttaagggccaggaactcgaccaaccctgcaacttcctctggttggccatatctcccta 319
||||||| |||||||| || || | |||||||| || |||||||||||||| | || |
Sbjct: 417 ggttaagagccaggaattccactagtcctgcaacctcttctggttggccataacgtccca 358
Query: 320 acggaatggttgacaagattttcttctcaagctcttctccaagttcggcagtcatatcag 379
| || || ||| |||||||||||| |||| || |||||||| | || |||||||||||
Sbjct: 357 agggtattgtttccaagattttcttttcaatgtcatctccaagcttggaagtcatatcag 298
Query: 380 atgcaatgaaccctggtgcaatagcattcacattgatatttctgcttgcatactccctgg 439
|||||||||||||||| |||| |||||| ||||| ||||||||||||||||| ||| | |
Sbjct: 297 atgcaatgaaccctggggcaacagcatttacattaatatttctgcttgcatattcctttg 238
Query: 440 caactgtttttgtgaaaccaatcactccagccttggctgcgctataattagcttggccaa 499
|||| | ||||| | ||||| || || ||||| || || ||||| || ||||| ||||
Sbjct: 237 caacactctttgtcaggccaataacacctgcctttgcagcactatagttggcttgcccaa 178
Query: 500 cattgccagtaagaccaactacagatgcaatgttgataatttttccctttctctttttca 559
|||||||| | |||||| || ||||| ||||| ||||| ||||||||||||||||||
Sbjct: 177 cattgccaaccaaaccaacaactgatgctatgttaataatccttccctttctctttttca 118
Query: 560 tcattacttttgttgcagcctgtgtacaaaggaagacaccagtaagattcagatcaatta 619
|||| | ||| | ||| ||||| || || ||||| ||||| || |||||||||||||| |
Sbjct: 117 tcataattttggctgccgcctgcgtgcagaggaacacaccggtgagattcagatcaataa 58
Query: 620 cgtcttgccactgagatttcttcatcctcatcaacaatgtgtctcgtgtaatccctg 676
| || |||||||||||||||||||| |||||||||||||| || |||||||| ||||
Sbjct: 57 cctcctgccactgagatttcttcattctcatcaacaatgtatcccgtgtaattcctg 1
>gb|BU897759.1|BU897759 X068A03 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 382
Score = 236 bits (119), Expect = 2e-060
Identities = 290/347 (83%)
Strand = Plus / Minus
Query: 333 caagattttcttctcaagctcttctccaagttcggcagtcatatcagatgcaatgaaccc 392
|||||||||||| |||| || |||||||| | |||||||||||||||||||||||| ||
Sbjct: 352 caagattttcttttcaatatcatctccaagcttggcagtcatatcagatgcaatgaatcc 293
Query: 393 tggtgcaatagcattcacattgatatttctgcttgcatactccctggcaactgtttttgt 452
||| || | |||||| ||||| || |||||||||||||| ||| | ||||| || |||||
Sbjct: 292 tggggccacagcatttacattaatgtttctgcttgcatattcctttgcaacagtctttgt 233
Query: 453 gaaaccaatcactccagccttggctgcgctataattagcttggccaacattgccagtaag 512
| ||||| ||||| ||||| || || ||||| || ||||| ||| |||||||| |
Sbjct: 232 caggccaataactcctgcctttgcagcactatagttggcttgcccagcattgccaaccaa 173
Query: 513 accaactacagatgcaatgttgataatttttccctttctctttttcatcattacttttgt 572
|||||| || ||||| ||||| ||||| |||||||||||||||||||||| | ||| |
Sbjct: 172 accaacaactgatgctatgttaataatccttccctttctctttttcatcataattttggc 113
Query: 573 tgcagcctgtgtacaaaggaagacaccagtaagattcagatcaattacgtcttgccactg 632
||| ||||| ||||||||||| |||||||| ||||| |||||||| || || ||||||||
Sbjct: 112 tgctgcctgcgtacaaaggaatacaccagtgagattaagatcaataacctcctgccactg 53
Query: 633 agatttcttcatcctcatcaacaatgtgtctcgtgtaatccctgcat 679
|||||||||||| ||||||| |||||| || |||||||| |||||||
Sbjct: 52 agatttcttcattctcatcagcaatgtatcccgtgtaattcctgcat 6
>gb|CF229731.1|CF229731 PtaXM0028H6H0616 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 633
Score = 228 bits (115), Expect = 4e-058
Identities = 409/509 (80%)
Strand = Plus / Minus
Query: 200 cttacattaccatccctccgtcaattgtaagcacctgtccagtcatatagctagctgcgg 259
||||||| ||||| ||||| || || || | |||||||||||| || || || | ||||
Sbjct: 541 cttacatcaccattcctccatcgatagtcaacacctgtccagtgatgtaactggaagcgg 482
Query: 260 ggttaagggccaggaactcgaccaaccctgcaacttcctctggttggccatatctcccta 319
||||||| |||||||| || || | |||||||| | | |||||||||||| | || |
Sbjct: 481 ggttaagagccaggaattccactagtcctgcaacctnttntggttggccataacgtccca 422
Query: 320 acggaatggttgacaagattttcttctcaagctcttctccaagttcggcagtcatatcag 379
| || || ||| |||||||||||| |||| || |||||||| | || |||||||||||
Sbjct: 421 agggtattgtttccaagattttcttttcaatgtcatctccaagcttggaagtcatatcag 362
Query: 380 atgcaatgaaccctggtgcaatagcattcacattgatatttctgcttgcatactccctgg 439
||||||||||||| || |||| |||||| ||||| ||||||||||||||||| ||| | |
Sbjct: 361 atgcaatgaaccccggggcaacagcatttacattaatatttctgcttgcatattcctttg 302
Query: 440 caactgtttttgtgaaaccaatcactccagccttggctgcgctataattagcttggccaa 499
|||| | ||||| | ||||| || || ||||| || || ||||| || ||||| ||||
Sbjct: 301 caacactctttgtcaggccaataacacctgcctttgcagcactatagttggcttgcccaa 242
Query: 500 cattgccagtaagaccaactacagatgcaatgttgataatttttccctttctctttttca 559
|||||||| | |||||| || ||||| | ||||| ||||||||||||||||||
Sbjct: 241 cattgccaaccaaaccaacaactgatgctannccnataatccttccctttctctttttca 182
Query: 560 tcattacttttgttgcagcctgtgtacaaaggaagacaccagtaagattcagatcaatta 619
|||| | ||| | ||| ||||| || || ||||| ||||| || |||||||||||||| |
Sbjct: 181 tcataattttggctgccgcctgcgtgcagaggaacacaccggtgagattcagatcaataa 122
Query: 620 cgtcttgccactgagatttcttcatcctcatcaacaatgtgtctcgtgtaatccctgcat 679
| || |||||||||||||||||||| |||||||||||||| || |||||||| || ||||
Sbjct: 121 cctcctgccactgagatttcttcattctcatcaacaatgtatcccgtgtaattcccgcat 62
Query: 680 tatttaccagcacatctattgttccccat 708
|||||| ||| ||||| | |||||||||
Sbjct: 61 tatttancagtacatcaacagttccccat 33
>gb|DT510084.1|DT510084 WS02425.BR_I19 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02425_I19 5', mRNA sequence
Length = 798
Score = 222 bits (112), Expect = 3e-056
Identities = 298/360 (82%)
Strand = Plus / Minus
Query: 513 accaactacagatgcaatgttgataatttttccctttctctttttcatcattacttttgt 572
|||||| || ||||| ||||| ||||| |||||||||||||||||||||| | ||| |
Sbjct: 761 accaacaactgatgctatgttaataatccttccctttctctttttcatcataattttggc 702
Query: 573 tgcagcctgtgtacaaaggaagacaccagtaagattcagatcaattacgtcttgccactg 632
||| ||||||||||||||||| |||||||| ||||| |||||||| || || ||||||||
Sbjct: 701 tgctgcctgtgtacaaaggaatacaccagtgagattaagatcaataacctcctgccactg 642
Query: 633 agatttcttcatcctcatcaacaatgtgtctcgtgtaatccctgcattatttaccagcac 692
|||||||||||| ||||||| |||||| || |||||||| ||||||||||||| ||| |
Sbjct: 641 agatttcttcattctcatcagcaatgtatcccgtgtaattcctgcattatttatcagtat 582
Query: 693 atctattgttccccatttatctagagctgctttcatcatagactctacatcagcttcttt 752
||| | ||||||||| ||| | ||| | ||||||||| || || |||||||| |||||
Sbjct: 581 atcaacggttccccatgcatcaacagcagttttcatcattgattccacatcagcctcttt 522
Query: 753 tgaaacatctcctccgaaggtgatagcctcaccaccagatgcttcaatctctttggagac 812
||||||||| || || || |||| |||| ||||||| | || |||||||||||||| ||
Sbjct: 521 tgaaacatcacccccaaaagtgagggcctgaccaccataagcctcaatctctttggaaac 462
Query: 813 ctcttcagcctctttcgaggaccgggcatagtttaccagaaccttgcatcctgcttttcc 872
|| ||||| || || || |||| ||||| || |||| |||||||| |||||||||||
Sbjct: 461 ttcctcagcttcctttgaagacctagcataattaaccaagaccttgcaacctgcttttcc 402
>gb|DT478567.1|DT478567 WS02523.BR_C07 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02523_C07 5', mRNA sequence
Length = 873
Score = 220 bits (111), Expect = 1e-055
Identities = 297/359 (82%)
Strand = Plus / Minus
Query: 514 ccaactacagatgcaatgttgataatttttccctttctctttttcatcattacttttgtt 573
||||| || ||||| ||||| ||||| |||||||||||||||||||||| | ||| | |
Sbjct: 834 ccaacaactgatgctatgttaataatccttccctttctctttttcatcataattttggct 775
Query: 574 gcagcctgtgtacaaaggaagacaccagtaagattcagatcaattacgtcttgccactga 633
|| ||||||||||||||||| |||||||| ||||| |||||||| || || |||||||||
Sbjct: 774 gctgcctgtgtacaaaggaatacaccagtgagattaagatcaataacctcctgccactga 715
Query: 634 gatttcttcatcctcatcaacaatgtgtctcgtgtaatccctgcattatttaccagcaca 693
||||||||||| ||||||| |||||| || | |||||| ||||||||||||| ||| | |
Sbjct: 714 gatttcttcattctcatcagcaatgtatcccttgtaattcctgcattatttatcagtata 655
Query: 694 tctattgttccccatttatctagagctgctttcatcatagactctacatcagcttctttt 753
|| | ||||||||| ||| | ||| | ||||||||| ||||| |||||||| ||||||
Sbjct: 654 tcaacggttccccatgcatcaacagcagttttcatcattgactccacatcagcctctttt 595
Query: 754 gaaacatctcctccgaaggtgatagcctcaccaccagatgcttcaatctctttggagacc 813
|||||||| || || || |||| |||| ||||||| | || |||||||||||||| ||
Sbjct: 594 gaaacatcacccccaaaagtgagggcctgaccaccataagcctcaatctctttggaaact 535
Query: 814 tcttcagcctctttcgaggaccgggcatagtttaccagaaccttgcatcctgcttttcc 872
|| ||||| || || || |||| ||||| || |||| |||||||| |||||||||||
Sbjct: 534 tcctcagcttcctttgaagacctagcataattaaccaagaccttgcaacctgcttttcc 476
>gb|CV257073.1|CV257073 WS0245.B21_J13 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0245_J13 3', mRNA sequence
Length = 701
Score = 212 bits (107), Expect = 2e-053
Identities = 350/431 (81%)
Strand = Plus / Plus
Query: 200 cttacattaccatccctccgtcaattgtaagcacctgtccagtcatatagctagctgcgg 259
||||||||||||| ||||| ||||| || | |||||||||||| || || || | ||||
Sbjct: 270 cttacattaccattcctccatcaatagtgaacacctgtccagtgatgtaactggaggcgg 329
Query: 260 ggttaagggccaggaactcgaccaaccctgcaacttcctctggttggccatatctcccta 319
| ||||| |||||||| || || | |||||||| || |||||||||||||| | || |
Sbjct: 330 gattaagagccaggaattccactagtcctgcaacctcttctggttggccataacgtccca 389
Query: 320 acggaatggttgacaagattttcttctcaagctcttctccaagttcggcagtcatatcag 379
| || || ||| |||||||||||| |||| || |||||||| | ||||||||||||||
Sbjct: 390 aagggattgtttccaagattttcttttcaatatcatctccaagcttggcagtcatatcag 449
Query: 380 atgcaatgaaccctggtgcaatagcattcacattgatatttctgcttgcatactccctgg 439
|||||||||| ||||| || | |||||| ||||| || |||||||||||||| ||| | |
Sbjct: 450 atgcaatgaatcctggggccacagcatttacattaatgtttctgcttgcatattcctttg 509
Query: 440 caactgtttttgtgaaaccaatcactccagccttggctgcgctataattagcttggccaa 499
|||| || ||||| | ||||| ||||| ||||| || || ||||| || ||||| ||
Sbjct: 510 caacagtctttgtcaggccaataactcctgcctttgcagcactatagttggcttgcccgg 569
Query: 500 cattgccagtaagaccaactacagatgcaatgttgataatttttccctttctctttttca 559
|||||||| | |||||| || ||||| ||||| ||||| ||||||||||||||||||
Sbjct: 570 cattgccaaccaaaccaacaactgatgctatgttaataatccttccctttctctttttca 629
Query: 560 tcattacttttgttgcagcctgtgtacaaaggaagacaccagtaagattcagatcaatta 619
|||| | ||| | ||| ||||||||||||||||| |||||||| ||||| |||||||| |
Sbjct: 630 tcataattttggctgctgcctgtgtacaaaggaatacaccagtgagattaagatcaataa 689
Query: 620 cgtcttgccac 630
| || ||||||
Sbjct: 690 cctcctgccac 700
>gb|DT509700.1|DT509700 WS02424.BR_H08 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02424_H08 5', mRNA sequence
Length = 756
Score = 190 bits (96), Expect = 9e-047
Identities = 246/296 (83%)
Strand = Plus / Minus
Query: 577 gcctgtgtacaaaggaagacaccagtaagattcagatcaattacgtcttgccactgagat 636
||||||||||||||||| |||||||| ||||| |||||||| || || ||||||||||||
Sbjct: 736 gcctgtgtacaaaggaatacaccagtgagattaagatcaataacctcctgccactgagat 677
Query: 637 ttcttcatcctcatcaacaatgtgtctcgtgtaatccctgcattatttaccagcacatct 696
|||||||| ||||||| |||||| || |||||||| ||||||||||||| ||| | |||
Sbjct: 676 ttcttcattctcatcagcaatgtatcccgtgtaattcctgcattatttatcagtatatca 617
Query: 697 attgttccccatttatctagagctgctttcatcatagactctacatcagcttcttttgaa 756
| ||||||||| ||| | ||| | ||||||||| ||||| |||||||| |||||||||
Sbjct: 616 acggttccccatgcatcaacagcagttttcatcattgactccacatcagcctcttttgaa 557
Query: 757 acatctcctccgaaggtgatagcctcaccaccagatgcttcaatctctttggagacctct 816
||||| || || || |||| |||| ||||||| | || |||||||||||||| || ||
Sbjct: 556 acatcacccccaaaagtgagggcctgaccaccataagcctcaatctctttggaaacttcc 497
Query: 817 tcagcctctttcgaggaccgggcatagtttaccagaaccttgcatcctgcttttcc 872
||||| || || || |||| ||||| || |||| |||||||| |||||||||||
Sbjct: 496 tcagcttcctttgaagacctagcataattaaccaagaccttgcaacctgcttttcc 441
>gb|CA928963.1|CA928963 MTU6TR.P8.H06 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 659
Score = 135 bits (68), Expect = 5e-030
Identities = 248/308 (80%)
Strand = Plus / Plus
Query: 200 cttacattaccatccctccgtcaattgtaagcacctgtccagtcatatagctagctgcgg 259
||||||||||||| ||||| ||||| || | |||||||||||| || || || | ||||
Sbjct: 349 cttacattaccattcctccatcaatagtgaacacctgtccagtgatgtaactggaggcgg 408
Query: 260 ggttaagggccaggaactcgaccaaccctgcaacttcctctggttggccatatctcccta 319
| ||||| |||||||| || || | |||||||| || |||||||||||||||| || |
Sbjct: 409 gattaagagccaggaattccactagtcctgcaacctcttctggttggccatatcgtccca 468
Query: 320 acggaatggttgacaagattttcttctcaagctcttctccaagttcggcagtcatatcag 379
| || || ||| |||||||||||| |||| || |||||||| | ||||||||||||||
Sbjct: 469 aagggattgtttccaagattttcttttcaatatcatctccaagcttggcagtcatatcag 528
Query: 380 atgcaatgaaccctggtgcaatagcattcacattgatatttctgcttgcatactccctgg 439
|||||||| | ||||| || | |||||| ||||| || |||||||||||||| ||| | |
Sbjct: 529 atgcaatggatcctggggccacagcatttacattaatgtttctgcttgcatattcctttg 588
Query: 440 caactgtttttgtgaaaccaatcactccagccttggctgcgctataattagcttggccaa 499
|||| || ||||| | ||||| ||||| ||||| || || ||||| || ||||| ||
Sbjct: 589 caacagtctttgtcaggccaataactcctgcctttgcagcactatagttggcttgcccgg 648
Query: 500 cattgcca 507
||||||||
Sbjct: 649 cattgcca 656
>gb|CK096406.1|CK096406 UB12CPH12.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB12CPH12 3', mRNA sequence
Length = 685
Score = 135 bits (68), Expect = 5e-030
Identities = 191/232 (82%)
Strand = Plus / Plus
Query: 200 cttacattaccatccctccgtcaattgtaagcacctgtccagtcatatagctagctgcgg 259
||||||||||||| ||||| ||||| || | |||||||||||| || || || | ||||
Sbjct: 441 cttacattaccattcctccatcaatagtgaacacctgtccagtgatgtaactggaggcgg 500
Query: 260 ggttaagggccaggaactcgaccaaccctgcaacttcctctggttggccatatctcccta 319
| ||||| |||||||| || || | |||||||| || |||||||||||||||| || |
Sbjct: 501 gattaagagccaggaattccactagtcctgcaacctcttctggttggccatatcgtccca 560
Query: 320 acggaatggttgacaagattttcttctcaagctcttctccaagttcggcagtcatatcag 379
| || || ||| |||||||||||| |||| || |||||||| | ||||||||||||||
Sbjct: 561 aagggattgtttccaagattttcttttcaatatcatctccaagcttggcagtcatatcag 620
Query: 380 atgcaatgaaccctggtgcaatagcattcacattgatatttctgcttgcata 431
|||||||||| ||||| || | |||||| ||||| || ||||||||||||||
Sbjct: 621 atgcaatgaatcctggggccacagcatttacattaatgtttctgcttgcata 672
>gb|CV243485.1|CV243485 WS0252.B21_A03 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0252_A03 3', mRNA sequence
Length = 842
Score = 95.6 bits (48), Expect = 4e-018
Identities = 168/208 (80%)
Strand = Plus / Plus
Query: 200 cttacattaccatccctccgtcaattgtaagcacctgtccagtcatatagctagctgcgg 259
||||||| ||||| ||||| || || || | |||||||||||| || || || | ||||
Sbjct: 429 cttacatcaccattcctccatcgatagtcaacacctgtccagtgatgtaactggaagcgg 488
Query: 260 ggttaagggccaggaactcgaccaaccctgcaacttcctctggttggccatatctcccta 319
||||||| |||||||| || || | |||||||| || |||||||||||||| | || |
Sbjct: 489 ggttaagagccaggaattccactagtcctgcaacctcttctggttggccataacgtccca 548
Query: 320 acggaatggttgacaagattttcttctcaagctcttctccaagttcggcagtcatatcag 379
| || || ||| |||||||||||| |||| || |||||||| | || |||||||||||
Sbjct: 549 agggtattgtttccaagattttcttttcaatgtcatctccaagcttggaagtcatatcag 608
Query: 380 atgcaatgaaccctggtgcaatagcatt 407
|||||||||| ||||| |||| ||||||
Sbjct: 609 atgcaatgaatcctggggcaacagcatt 636
Score = 89.7 bits (45), Expect = 2e-016
Identities = 123/149 (82%)
Strand = Plus / Plus
Query: 415 atatttctgcttgcatactccctggcaactgtttttgtgaaaccaatcactccagccttg 474
||||||||||||||||| ||| | ||||| || ||||| | ||||| || || |||||
Sbjct: 656 atatttctgcttgcatattcctttgcaacggtctttgtcaggccaataacacctgccttt 715
Query: 475 gctgcgctataattagcttggccaacattgccagtaagaccaactacagatgcaatgttg 534
|| || ||||| || ||||| |||||||||||| | |||||| || ||||| |||||
Sbjct: 716 gcagcactatagttggcttgcccaacattgccaaccaaaccaacaactgatgctatgtta 775
Query: 535 ataatttttccctttctctttttcatcat 563
|||||| ||||||||||||||||||||||
Sbjct: 776 ataattcttccctttctctttttcatcat 804
>gb|BU826355.1|BU826355 UK119TF06 Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 581
Score = 75.8 bits (38), Expect = 4e-012
Identities = 166/209 (79%)
Strand = Plus / Minus
Query: 664 cgtgtaatccctgcattatttaccagcacatctattgttccccatttatctagagctgct 723
|||||||| ||||||||||||| ||| | ||| | ||||||||| ||| | ||| | |
Sbjct: 574 cgtgtaattcctgcattatttatcagtatatcnacagttccccatgcatcaacagcagtt 515
Query: 724 ttcatcatagactctacatcagcttcttttgaaacatctcctccgaaggtgatagcctca 783
|||||||| || || |||||||| |||||||| ||||| || || || |||| ||||
Sbjct: 514 ttcatcattgattccacatcagcctcttttgagacatcacccccaaaagtgagggcctgg 455
Query: 784 ccaccagatgcttcaatctctttggagacctcttcagcctctttcgaggaccgggcatag 843
|||||| | || || ||||||||||| || || ||||| || || || |||| |||||
Sbjct: 454 ccaccataagcctcgatctctttggaaacttcctcagcttcctttgatgacctagcataa 395
Query: 844 tttaccagaaccttgcatcctgcttttcc 872
||||||| |||||||| |||||||||||
Sbjct: 394 tttaccaagaccttgcaacctgcttttcc 366
>gb|BU891131.1|BU891131 P046D03 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 675
Score = 75.8 bits (38), Expect = 4e-012
Identities = 122/150 (81%)
Strand = Plus / Minus
Query: 723 tttcatcatagactctacatcagcttcttttgaaacatctcctccgaaggtgatagcctc 782
||||||||| ||||| |||||||| |||||||||||||| || || || |||| || |
Sbjct: 660 tttcatcattgactccacatcagcctcttttgaaacatcacccccaaaagtgagggcttg 601
Query: 783 accaccagatgcttcaatctctttggagacctcttcagcctctttcgaggaccgggcata 842
||||||| | || |||||||||||||| || || ||||| || || || |||| |||||
Sbjct: 600 accaccataagcctcaatctctttggaaacttcctcagcttcctttgaagacctagcata 541
Query: 843 gtttaccagaaccttgcatcctgcttttcc 872
|| |||| |||||||| |||||||||||
Sbjct: 540 attaaccaagaccttgcaacctgcttttcc 511
>gb|BU836527.1|BU836527 T087E04 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 435
Score = 48.1 bits (24), Expect = 8e-004
Identities = 63/76 (82%)
Strand = Plus / Minus
Query: 200 cttacattaccatccctccgtcaattgtaagcacctgtccagtcatatagctagctgcgg 259
||||||||||||| ||||| ||||| || | |||||||||||| || || || | ||||
Sbjct: 78 cttacattaccattcctccatcaatagtgaacacctgtccagtgatgtaactggaggcgg 19
Query: 260 ggttaagggccaggaa 275
| ||||| ||||||||
Sbjct: 18 gattaagagccaggaa 3
>gb|CV257267.1|CV257267 WS0246.B21_C14 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0246_C14 3', mRNA sequence
Length = 698
Score = 40.1 bits (20), Expect = 0.20
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1118 ctgctgctgctacggtggcg 1137
||||||||||||||||||||
Sbjct: 69 ctgctgctgctacggtggcg 50
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 185,683
Number of Sequences: 369679
Number of extensions: 185683
Number of successful extensions: 53133
Number of sequences better than 0.5: 21
Number of HSP's better than 0.5 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53096
Number of HSP's gapped (non-prelim): 22
length of query: 1252
length of database: 203,408,664
effective HSP length: 19
effective length of query: 1233
effective length of database: 196,384,763
effective search space: 242142412779
effective search space used: 242142412779
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)