BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3995289.2.1
(559 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CV274900.1|CV274900 WS0174.B21.1_L23 PTxD-NR-A-8 Populus... 74 6e-012
gb|BI135897.1|BI135897 F059P92Y Populus flower cDNA library... 66 2e-009
gb|BI137392.1|BI137392 F085P45Y Populus flower cDNA library... 66 2e-009
gb|BU813730.1|BU813730 N014D07 Populus bark cDNA library Po... 66 2e-009
gb|BU836958.1|BU836958 T093A04 Populus apical shoot cDNA li... 66 2e-009
gb|CA934246.1|CA934246 MTU3TS.P5.A11 Aspen stem cDNA Librar... 66 2e-009
gb|CV227828.1|CV227828 WS0168.B21_F08 PT-DX-A-7 Populus tri... 66 2e-009
gb|CV232292.1|CV232292 WS0197.B21_C08 PT-DX-N-A-10 Populus ... 66 2e-009
gb|CV247238.1|CV247238 WS01117.B21_H24 PT-P-FL-A-2 Populus ... 66 2e-009
gb|CV247475.1|CV247475 WS01118.B21_E17 PT-P-FL-A-2 Populus ... 66 2e-009
gb|CV248464.1|CV248464 WS01120.B21_N11 PT-P-FL-A-2 Populus ... 66 2e-009
gb|CV249115.1|CV249115 WS01123.B21_B06 PT-P-FL-A-2 Populus ... 66 2e-009
gb|CV249960.1|CV249960 WS01125.B21_O02 PT-P-FL-A-2 Populus ... 66 2e-009
gb|CV273186.1|CV273186 WS0171.B21_P04 PTxD-NR-A-8 Populus t... 66 2e-009
gb|DT494126.1|DT494126 WS01117.BR_H24 PT-P-FL-A-2 Populus t... 66 2e-009
gb|DT494394.1|DT494394 WS01118.BR.1_E17 PT-P-FL-A-2 Populus... 66 2e-009
gb|DT495562.1|DT495562 WS01120.BR_N11 PT-P-FL-A-2 Populus t... 66 2e-009
gb|DT495692.1|DT495692 WS01121.BR_D13 PT-P-FL-A-2 Populus t... 66 2e-009
gb|DT496322.1|DT496322 WS01123.BR_B06 PT-P-FL-A-2 Populus t... 66 2e-009
gb|DT496477.1|DT496477 WS01123.BR_I13 PT-P-FL-A-2 Populus t... 66 2e-009
gb|DT497233.1|DT497233 WS01125.BR_O02 PT-P-FL-A-2 Populus t... 66 2e-009
gb|DT497441.1|DT497441 WS01126.BR_H18 PT-P-FL-A-2 Populus t... 66 2e-009
gb|DT498500.1|DT498500 WS0115.BR_I15 PT-P-FL-A-2 Populus tr... 66 2e-009
gb|AI166624.1|AI166624 xylem.est.438 Poplar xylem Lambda ZA... 60 9e-008
gb|CN519480.1|CN519480 GQ0102.B3_O08 GQ010 Populus trichoca... 60 9e-008
gb|CN519798.1|CN519798 GQ0108.B3_G24 GQ010 Populus trichoca... 60 9e-008
gb|CN519835.1|CN519835 GQ0105.B3_O03 GQ010 Populus trichoca... 60 9e-008
gb|CN520449.1|CN520449 GQ0105.B3_C13 GQ010 Populus trichoca... 60 9e-008
gb|CN549336.1|CN549336 GQ0241.B3_K23 GQ024 Populus trichoca... 60 9e-008
gb|AJ774331.1|AJ774331 AJ774331 Populus euphratica shoot 3-... 60 9e-008
gb|AJ779102.1|AJ779102 AJ779102 Populus euphratica cambium ... 60 9e-008
gb|CX172646.1|CX172646 D05_69-5_07.ab1 leaf inoculated with... 60 9e-008
gb|BP924831.1|BP924831 BP924831 full-length enriched poplar... 60 9e-008
gb|DT473381.1|DT473381 WS01229.BR_H19 PT-GT-FL-A-3 Populus ... 60 9e-008
gb|DT494517.1|DT494517 WS01118.BR.1_K12 PT-P-FL-A-2 Populus... 60 9e-008
gb|DT494930.1|DT494930 WS01119.BR_N16 PT-P-FL-A-2 Populus t... 60 9e-008
gb|DT496457.1|DT496457 WS01123.BR_H12 PT-P-FL-A-2 Populus t... 60 9e-008
gb|DT498674.1|DT498674 WS0116.BR_A20 PT-P-FL-A-2 Populus tr... 60 9e-008
gb|DT499119.1|DT499119 WS0117.BR_F17 PT-P-FL-A-2 Populus tr... 60 9e-008
gb|DT499142.1|DT499142 WS0117.BR_G23 PT-P-FL-A-2 Populus tr... 60 9e-008
gb|DT499957.1|DT499957 WS9991.BR_N04 PT-P-FL-A-2 Populus tr... 60 9e-008
gb|DV462895.1|DV462895 MTUNUL1.P1.B03 NUL Populus fremontii... 60 9e-008
gb|DV463191.1|DV463191 MTUNUL1.P12.H03 NUL Populus fremonti... 60 9e-008
gb|CV247583.1|CV247583 WS01118.B21_K12 PT-P-FL-A-2 Populus ... 58 4e-007
gb|CV250352.1|CV250352 WS0113.B21_E19 PT-P-FL-A-2 Populus t... 58 4e-007
gb|CV272803.1|CV272803 WS0158.B21_M04 PTxN-IB-A-6 Populus t... 58 4e-007
gb|DT476405.1|DT476405 WS01229.B21_H19 PT-GT-FL-A-3 Populus... 58 4e-007
gb|DT523804.1|DT523804 WS02040.B21_L01 PTxN-IB-N-A-11 Popul... 58 4e-007
gb|AI162110.1|AI162110 A012P31U Hybrid aspen plasmid librar... 56 1e-006
gb|CA934542.1|CA934542 MTU3TS.P9.B09 Aspen stem cDNA Librar... 56 1e-006
gb|CV249252.1|CV249252 WS01123.B21_I13 PT-P-FL-A-2 Populus ... 56 1e-006
gb|BU836414.1|BU836414 T086C08 Populus apical shoot cDNA li... 54 6e-006
gb|BI127175.1|BI127175 G003P82Y Populus cambium cDNA librar... 52 2e-005
gb|CF119161.1|CF119161 MTU10CS.P14.C08 Aspen stem cDNA Libr... 46 0.001
gb|CV266798.1|CV266798 WS02030.B21_A05 PTxN-IB-N-A-11 Popul... 44 0.006
gb|CV258651.1|CV258651 WS0201.B21_C09 PTxN-IB-N-A-11 Populu... 42 0.022
gb|DT469739.1|DT469739 WS01918.C21_L18 PT-DX-N-A-10 Populus... 42 0.022
gb|AJ778451.1|AJ778451 AJ778451 Populus euphratica cambium ... 40 0.088
gb|BI137850.1|BI137850 F094P40Y Populus flower cDNA library... 38 0.35
gb|BU872098.1|BU872098 Q039B08 Populus flower cDNA library ... 38 0.35
gb|BU896960.1|BU896960 X048E12 Populus wood cDNA library Po... 38 0.35
gb|CF119043.1|CF119043 MTU10CS.P12.G05 Aspen stem cDNA Libr... 38 0.35
gb|CF228123.1|CF228123 PtaXM0009A11A1101 Poplar cDNA librar... 38 0.35
gb|CK099220.1|CK099220 A057P34.5pR Hybrid aspen plasmid lib... 38 0.35
gb|CK113470.1|CK113470 UR107TH02 Populus root cDNA library ... 38 0.35
gb|CN519343.1|CN519343 GQ0102.B3_M09 GQ010 Populus trichoca... 38 0.35
gb|CN523303.1|CN523303 GQ015M01.B3_F22 GQ015 Populus tricho... 38 0.35
gb|AJ777114.1|AJ777114 AJ777114 Populus euphratica root 3-6... 38 0.35
gb|CV226929.1|CV226929 WS0165.B21_L05 PT-DX-A-7 Populus tri... 38 0.35
gb|CV239640.1|CV239640 WS0233.B21_A13 PT-MB-A-13 Populus tr... 38 0.35
gb|CV240452.1|CV240452 WS0251.B21_G19 PT-MB-N-A-15 Populus ... 38 0.35
gb|CV243063.1|CV243063 WS02516.B21.1_M20 PT-MB-N-A-15 Popul... 38 0.35
gb|CV243521.1|CV243521 WS0252.B21_B18 PT-MB-N-A-15 Populus ... 38 0.35
gb|CV246942.1|CV246942 WS01116.B21_I01 PT-P-FL-A-2 Populus ... 38 0.35
gb|CV248068.1|CV248068 WS0112.B21_F01 PT-P-FL-A-2 Populus t... 38 0.35
gb|CV256259.1|CV256259 WS0243.B21_F22 PTxD-ICC-N-A-14 Popul... 38 0.35
gb|CX169829.1|CX169829 G03_69-59_13.ab1 leaf inoculated wit... 38 0.35
gb|BP924774.1|BP924774 BP924774 full-length enriched poplar... 38 0.35
gb|BP927064.1|BP927064 BP927064 full-length enriched poplar... 38 0.35
gb|DT482210.1|DT482210 WS02519.B21_D06 PT-MB-N-A-15 Populus... 38 0.35
gb|DT508782.1|DT508782 WS02421.BR_O18 PTxD-ICC-N-A-14 Popul... 38 0.35
gb|DT516431.1|DT516431 WS02431.B21_F22 PTxD-ICC-N-A-14 Popu... 38 0.35
gb|DV465979.1|DV465979 MTUNUL1.P45.G01 NUL Populus fremonti... 38 0.35
gb|DV466604.1|DV466604 MTUNUL1.P7.G12 NUL Populus fremontii... 38 0.35
gb|DV466641.1|DV466641 MTUNUL1.P8.D01 NUL Populus fremontii... 38 0.35
>gb|CV274900.1|CV274900 WS0174.B21.1_L23 PTxD-NR-A-8 Populus trichocarpa x Populus
deltoides cDNA clone WS0174_L23 3', mRNA sequence
Length = 858
Score = 73.8 bits (37), Expect = 6e-012
Identities = 108/132 (81%)
Strand = Plus / Minus
Query: 411 caagaactggacgctgggntgcgtgtacctgatcgggcactgcctgtcgtggtccggctg 470
|||||||||||| || || ||| | ||||| || || || |||||||| ||||| || ||
Sbjct: 647 caagaactggacccttggttgcctctacctcattggccattgcctgtcctggtctgggtg 588
Query: 471 gctggtgctgcaggctcccgtgctgaagaagtacccggcacggctggccgtcacctccta 530
||| ||| ||||||| || || || ||||||||||| || |||| |||||||||||||
Sbjct: 587 gcttgtgttgcaggcaccagttctaaagaagtaccctgctaggctctccgtcacctccta 528
Query: 531 cacctgcttctt 542
|||||| |||||
Sbjct: 527 cacctgtttctt 516
>gb|BI135897.1|BI135897 F059P92Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 498
Score = 65.9 bits (33), Expect = 2e-009
Identities = 107/132 (81%)
Strand = Plus / Plus
Query: 411 caagaactggacgctgggntgcgtgtacctgatcgggcactgcctgtcgtggtccggctg 470
|||||||||||| || || ||| | ||||| || || || |||||||| ||||| || ||
Sbjct: 43 caagaactggacccttggttgcctctacctcattggccattgcctgtcctggtctggttg 102
Query: 471 gctggtgctgcaggctcccgtgctgaagaagtacccggcacggctggccgtcacctccta 530
||| ||| ||||||| || || || ||||||||||| || |||| |||||||||||||
Sbjct: 103 gcttgtgttgcaggcaccagttctaaagaagtaccctgctaggctctccgtcacctccta 162
Query: 531 cacctgcttctt 542
||| || |||||
Sbjct: 163 cacttgtttctt 174
>gb|BI137392.1|BI137392 F085P45Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 484
Score = 65.9 bits (33), Expect = 2e-009
Identities = 107/132 (81%)
Strand = Plus / Plus
Query: 411 caagaactggacgctgggntgcgtgtacctgatcgggcactgcctgtcgtggtccggctg 470
|||||||||||| || || ||| | ||||| || || || |||||||| ||||| || ||
Sbjct: 44 caagaactggacccttggttgcctctacctcattggccattgcctgtcctggtctggttg 103
Query: 471 gctggtgctgcaggctcccgtgctgaagaagtacccggcacggctggccgtcacctccta 530
||| ||| ||||||| || || || ||||||||||| || |||| |||||||||||||
Sbjct: 104 gcttgtgttgcaggcaccagttctaaagaagtaccctgctaggctctccgtcacctccta 163
Query: 531 cacctgcttctt 542
||| || |||||
Sbjct: 164 cacttgtttctt 175
>gb|BU813730.1|BU813730 N014D07 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 591
Score = 65.9 bits (33), Expect = 2e-009
Identities = 107/132 (81%)
Strand = Plus / Plus
Query: 411 caagaactggacgctgggntgcgtgtacctgatcgggcactgcctgtcgtggtccggctg 470
|||||||||||| || || || | ||||| ||||| || ||| |||| ||||| |||||
Sbjct: 222 caagaactggacccttggttgtatctacctcatcggccattgcttgtcctggtctggctg 281
Query: 471 gctggtgctgcaggctcccgtgctgaagaagtacccggcacggctggccgtcacctccta 530
||| ||| ||||||| || || |||||||||||||| || |||| | |||||||| ||
Sbjct: 282 gcttgtgttgcaggcaccagttctgaagaagtaccctgctaggctctcggtcacctctta 341
Query: 531 cacctgcttctt 542
|||||| |||||
Sbjct: 342 cacctgtttctt 353
>gb|BU836958.1|BU836958 T093A04 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 595
Score = 65.9 bits (33), Expect = 2e-009
Identities = 107/132 (81%)
Strand = Plus / Plus
Query: 411 caagaactggacgctgggntgcgtgtacctgatcgggcactgcctgtcgtggtccggctg 470
|||||||||||| || || ||| | ||||| || || || ||| |||| ||||| || ||
Sbjct: 49 caagaactggacccttggttgcctctacctcattggccattgcttgtcctggtctggttg 108
Query: 471 gctggtgctgcaggctcccgtgctgaagaagtacccggcacggctggccgtcacctccta 530
||| ||| ||||||| || || || ||||||||||| || |||| |||||||||||||
Sbjct: 109 gcttgtgttgcaggcaccagttctaaagaagtaccctgctaggctctccgtcacctccta 168
Query: 531 cacctgcttctt 542
||| ||||||||
Sbjct: 169 cacttgcttctt 180
>gb|CA934246.1|CA934246 MTU3TS.P5.A11 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 389
Score = 65.9 bits (33), Expect = 2e-009
Identities = 107/132 (81%)
Strand = Plus / Minus
Query: 411 caagaactggacgctgggntgcgtgtacctgatcgggcactgcctgtcgtggtccggctg 470
|||||||||||| || || ||| | ||||| || || || ||| |||| ||||| || ||
Sbjct: 262 caagaactggacccttggttgcctctacctcattggccattgcttgtcctggtctggttg 203
Query: 471 gctggtgctgcaggctcccgtgctgaagaagtacccggcacggctggccgtcacctccta 530
||| ||| ||||||| || || || ||||||||||| || |||| |||||||||||||
Sbjct: 202 gcttgtgttgcaggcaccagttctaaagaagtaccctgctaggctctccgtcacctccta 143
Query: 531 cacctgcttctt 542
||| ||||||||
Sbjct: 142 cacttgcttctt 131
>gb|CV227828.1|CV227828 WS0168.B21_F08 PT-DX-A-7 Populus trichocarpa cDNA clone WS0168_F08
3', mRNA sequence
Length = 839
Score = 65.9 bits (33), Expect = 2e-009
Identities = 107/132 (81%)
Strand = Plus / Plus
Query: 411 caagaactggacgctgggntgcgtgtacctgatcgggcactgcctgtcgtggtccggctg 470
|||||||||||| || || ||| | ||||| || || || |||||||| ||||| || ||
Sbjct: 271 caagaactggacccttggttgcctctacctcattggccattgcctgtcctggtctggttg 330
Query: 471 gctggtgctgcaggctcccgtgctgaagaagtacccggcacggctggccgtcacctccta 530
||| ||| ||||||| || || || ||||||||||| || |||| |||||||||||||
Sbjct: 331 gcttgtgttgcaggcaccagttctaaagaagtaccctgctaggctctccgtcacctccta 390
Query: 531 cacctgcttctt 542
||| || |||||
Sbjct: 391 cacttgtttctt 402
>gb|CV232292.1|CV232292 WS0197.B21_C08 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0197_C08 3', mRNA sequence
Length = 701
Score = 65.9 bits (33), Expect = 2e-009
Identities = 107/132 (81%)
Strand = Plus / Plus
Query: 411 caagaactggacgctgggntgcgtgtacctgatcgggcactgcctgtcgtggtccggctg 470
|||||||||||| || || ||| | ||||| || || || |||||||| ||||| || ||
Sbjct: 271 caagaactggacccttggttgcctctacctcattggccattgcctgtcctggtctggttg 330
Query: 471 gctggtgctgcaggctcccgtgctgaagaagtacccggcacggctggccgtcacctccta 530
||| ||| ||||||| || || || ||||||||||| || |||| |||||||||||||
Sbjct: 331 gcttgtgttgcaggcaccagttctaaagaagtaccctgctaggctctccgtcacctccta 390
Query: 531 cacctgcttctt 542
||| || |||||
Sbjct: 391 cacttgtttctt 402
>gb|CV247238.1|CV247238 WS01117.B21_H24 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01117_H24 3', mRNA sequence
Length = 882
Score = 65.9 bits (33), Expect = 2e-009
Identities = 107/132 (81%)
Strand = Plus / Minus
Query: 411 caagaactggacgctgggntgcgtgtacctgatcgggcactgcctgtcgtggtccggctg 470
|||||||||||| || || ||| | ||||| || || || |||||||| ||||| || ||
Sbjct: 650 caagaactggacccttggttgcctctacctcattggccattgcctgtcctggtctggttg 591
Query: 471 gctggtgctgcaggctcccgtgctgaagaagtacccggcacggctggccgtcacctccta 530
||| ||| ||||||| || || || ||||||||||| || |||| |||||||||||||
Sbjct: 590 gcttgtgttgcaggcaccagttctaaagaagtaccctgctaggctctccgtcacctccta 531
Query: 531 cacctgcttctt 542
||| || |||||
Sbjct: 530 cacttgtttctt 519
>gb|CV247475.1|CV247475 WS01118.B21_E17 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01118_E17 3', mRNA sequence
Length = 694
Score = 65.9 bits (33), Expect = 2e-009
Identities = 107/132 (81%)
Strand = Plus / Minus
Query: 411 caagaactggacgctgggntgcgtgtacctgatcgggcactgcctgtcgtggtccggctg 470
|||||||||||| || || ||| | ||||| || || || |||||||| ||||| || ||
Sbjct: 649 caagaactggacccttggttgcctctacctcattggccattgcctgtcctggtctggttg 590
Query: 471 gctggtgctgcaggctcccgtgctgaagaagtacccggcacggctggccgtcacctccta 530
||| ||| ||||||| || || || ||||||||||| || |||| |||||||||||||
Sbjct: 589 gcttgtgttgcaggcaccagttctaaagaagtaccctgctaggctctccgtcacctccta 530
Query: 531 cacctgcttctt 542
||| || |||||
Sbjct: 529 cacttgtttctt 518
>gb|CV248464.1|CV248464 WS01120.B21_N11 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01120_N11 3', mRNA sequence
Length = 668
Score = 65.9 bits (33), Expect = 2e-009
Identities = 107/132 (81%)
Strand = Plus / Minus
Query: 411 caagaactggacgctgggntgcgtgtacctgatcgggcactgcctgtcgtggtccggctg 470
|||||||||||| || || ||| | ||||| || || || |||||||| ||||| || ||
Sbjct: 647 caagaactggacccttggttgcctctacctcattggccattgcctgtcctggtctggttg 588
Query: 471 gctggtgctgcaggctcccgtgctgaagaagtacccggcacggctggccgtcacctccta 530
||| ||| ||||||| || || || ||||||||||| || |||| |||||||||||||
Sbjct: 587 gcttgtgttgcaggcaccagttctaaagaagtaccctgctaggctctccgtcacctccta 528
Query: 531 cacctgcttctt 542
||| || |||||
Sbjct: 527 cacttgtttctt 516
>gb|CV249115.1|CV249115 WS01123.B21_B06 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01123_B06 3', mRNA sequence
Length = 746
Score = 65.9 bits (33), Expect = 2e-009
Identities = 107/132 (81%)
Strand = Plus / Minus
Query: 411 caagaactggacgctgggntgcgtgtacctgatcgggcactgcctgtcgtggtccggctg 470
|||||||||||| || || ||| | ||||| || || || |||||||| ||||| || ||
Sbjct: 649 caagaactggacccttggttgcctctacctcattggccattgcctgtcctggtctggttg 590
Query: 471 gctggtgctgcaggctcccgtgctgaagaagtacccggcacggctggccgtcacctccta 530
||| ||| ||||||| || || || ||||||||||| || |||| |||||||||||||
Sbjct: 589 gcttgtgttgcaggcaccagttctaaagaagtaccctgctaggctctccgtcacctccta 530
Query: 531 cacctgcttctt 542
||| || |||||
Sbjct: 529 cacttgtttctt 518
>gb|CV249960.1|CV249960 WS01125.B21_O02 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01125_O02 3', mRNA sequence
Length = 676
Score = 65.9 bits (33), Expect = 2e-009
Identities = 107/132 (81%)
Strand = Plus / Minus
Query: 411 caagaactggacgctgggntgcgtgtacctgatcgggcactgcctgtcgtggtccggctg 470
|||||||||||| || || ||| | ||||| || || || |||||||| ||||| || ||
Sbjct: 649 caagaactggacccttggttgcctctacctcattggccattgcctgtcctggtctggttg 590
Query: 471 gctggtgctgcaggctcccgtgctgaagaagtacccggcacggctggccgtcacctccta 530
||| ||| ||||||| || || || ||||||||||| || |||| |||||||||||||
Sbjct: 589 gcttgtgttgcaggcaccagttctaaagaagtaccctgctaggctctccgtcacctccta 530
Query: 531 cacctgcttctt 542
||| || |||||
Sbjct: 529 cacttgtttctt 518
>gb|CV273186.1|CV273186 WS0171.B21_P04 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0171_P04 3', mRNA sequence
Length = 800
Score = 65.9 bits (33), Expect = 2e-009
Identities = 107/132 (81%)
Strand = Plus / Minus
Query: 411 caagaactggacgctgggntgcgtgtacctgatcgggcactgcctgtcgtggtccggctg 470
|||||||||||| || || ||| | ||||| || || || |||||||| ||||| || ||
Sbjct: 650 caagaactggacccttggttgcctctacctcattggccattgcctgtcctggtctggttg 591
Query: 471 gctggtgctgcaggctcccgtgctgaagaagtacccggcacggctggccgtcacctccta 530
||| ||| ||||||| || || || ||||||||||| || |||| |||||||||||||
Sbjct: 590 gcttgtgttgcaggcaccagttctaaagaagtaccctgctaggctctccgtcacctccta 531
Query: 531 cacctgcttctt 542
||| || |||||
Sbjct: 530 cacttgtttctt 519
>gb|DT494126.1|DT494126 WS01117.BR_H24 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01117_H24 5', mRNA sequence
Length = 852
Score = 65.9 bits (33), Expect = 2e-009
Identities = 107/132 (81%)
Strand = Plus / Plus
Query: 411 caagaactggacgctgggntgcgtgtacctgatcgggcactgcctgtcgtggtccggctg 470
|||||||||||| || || ||| | ||||| || || || |||||||| ||||| || ||
Sbjct: 652 caagaactggacccttggttgcctctacctcattggccattgcctgtcctggtctggttg 711
Query: 471 gctggtgctgcaggctcccgtgctgaagaagtacccggcacggctggccgtcacctccta 530
||| ||| ||||||| || || || ||||||||||| || |||| |||||||||||||
Sbjct: 712 gcttgtgttgcaggcaccagttctaaagaagtaccctgctaggctctccgtcacctccta 771
Query: 531 cacctgcttctt 542
||| || |||||
Sbjct: 772 cacttgtttctt 783
>gb|DT494394.1|DT494394 WS01118.BR.1_E17 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01118_E17 5', mRNA sequence
Length = 891
Score = 65.9 bits (33), Expect = 2e-009
Identities = 107/132 (81%)
Strand = Plus / Plus
Query: 411 caagaactggacgctgggntgcgtgtacctgatcgggcactgcctgtcgtggtccggctg 470
|||||||||||| || || ||| | ||||| || || || |||||||| ||||| || ||
Sbjct: 647 caagaactggacccttggttgcctctacctcattggccattgcctgtcctggtctggttg 706
Query: 471 gctggtgctgcaggctcccgtgctgaagaagtacccggcacggctggccgtcacctccta 530
||| ||| ||||||| || || || ||||||||||| || |||| |||||||||||||
Sbjct: 707 gcttgtgttgcaggcaccagttctaaagaagtaccctgctaggctctccgtcacctccta 766
Query: 531 cacctgcttctt 542
||| || |||||
Sbjct: 767 cacttgtttctt 778
>gb|DT495562.1|DT495562 WS01120.BR_N11 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01120_N11 5', mRNA sequence
Length = 893
Score = 65.9 bits (33), Expect = 2e-009
Identities = 107/132 (81%)
Strand = Plus / Plus
Query: 411 caagaactggacgctgggntgcgtgtacctgatcgggcactgcctgtcgtggtccggctg 470
|||||||||||| || || ||| | ||||| || || || |||||||| ||||| || ||
Sbjct: 647 caagaactggacccttggttgcctctacctcattggccattgcctgtcctggtctggttg 706
Query: 471 gctggtgctgcaggctcccgtgctgaagaagtacccggcacggctggccgtcacctccta 530
||| ||| ||||||| || || || ||||||||||| || |||| |||||||||||||
Sbjct: 707 gcttgtgttgcaggcaccagttctaaagaagtaccctgctaggctctccgtcacctccta 766
Query: 531 cacctgcttctt 542
||| || |||||
Sbjct: 767 cacttgtttctt 778
>gb|DT495692.1|DT495692 WS01121.BR_D13 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01121_D13 5', mRNA sequence
Length = 836
Score = 65.9 bits (33), Expect = 2e-009
Identities = 107/132 (81%)
Strand = Plus / Plus
Query: 411 caagaactggacgctgggntgcgtgtacctgatcgggcactgcctgtcgtggtccggctg 470
|||||||||||| || || ||| | ||||| || || || |||||||| ||||| || ||
Sbjct: 648 caagaactggacccttggttgcctctacctcattggccattgcctgtcctggtctggttg 707
Query: 471 gctggtgctgcaggctcccgtgctgaagaagtacccggcacggctggccgtcacctccta 530
||| ||| ||||||| || || || ||||||||||| || |||| |||||||||||||
Sbjct: 708 gcttgtgttgcaggcaccagttctaaagaagtaccctgctaggctctccgtcacctccta 767
Query: 531 cacctgcttctt 542
||| || |||||
Sbjct: 768 cacttgtttctt 779
>gb|DT496322.1|DT496322 WS01123.BR_B06 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01123_B06 5', mRNA sequence
Length = 874
Score = 65.9 bits (33), Expect = 2e-009
Identities = 107/132 (81%)
Strand = Plus / Plus
Query: 411 caagaactggacgctgggntgcgtgtacctgatcgggcactgcctgtcgtggtccggctg 470
|||||||||||| || || ||| | ||||| || || || |||||||| ||||| || ||
Sbjct: 647 caagaactggacccttggttgcctctacctcattggccattgcctgtcctggtctggttg 706
Query: 471 gctggtgctgcaggctcccgtgctgaagaagtacccggcacggctggccgtcacctccta 530
||| ||| ||||||| || || || ||||||||||| || |||| |||||||||||||
Sbjct: 707 gcttgtgttgcaggcaccagttctaaagaagtaccctgctaggctctccgtcacctccta 766
Query: 531 cacctgcttctt 542
||| || |||||
Sbjct: 767 cacttgtttctt 778
>gb|DT496477.1|DT496477 WS01123.BR_I13 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01123_I13 5', mRNA sequence
Length = 892
Score = 65.9 bits (33), Expect = 2e-009
Identities = 107/132 (81%)
Strand = Plus / Plus
Query: 411 caagaactggacgctgggntgcgtgtacctgatcgggcactgcctgtcgtggtccggctg 470
|||||||||||| || || ||| | ||||| || || || |||||||| ||||| || ||
Sbjct: 648 caagaactggacccttggttgcctctacctcattggccattgcctgtcctggtctggttg 707
Query: 471 gctggtgctgcaggctcccgtgctgaagaagtacccggcacggctggccgtcacctccta 530
||| ||| ||||||| || || || ||||||||||| || |||| |||||||||||||
Sbjct: 708 gcttgtgttgcaggcaccagttctaaagaagtaccctgctaggctctccgtcacctccta 767
Query: 531 cacctgcttctt 542
||| || |||||
Sbjct: 768 cacttgtttctt 779
>gb|DT497233.1|DT497233 WS01125.BR_O02 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01125_O02 5', mRNA sequence
Length = 807
Score = 65.9 bits (33), Expect = 2e-009
Identities = 107/132 (81%)
Strand = Plus / Plus
Query: 411 caagaactggacgctgggntgcgtgtacctgatcgggcactgcctgtcgtggtccggctg 470
|||||||||||| || || ||| | ||||| || || || |||||||| ||||| || ||
Sbjct: 647 caagaactggacccttggttgcctctacctcattggccattgcctgtcctggtctggttg 706
Query: 471 gctggtgctgcaggctcccgtgctgaagaagtacccggcacggctggccgtcacctccta 530
||| ||| ||||||| || || || ||||||||||| || |||| |||||||||||||
Sbjct: 707 gcttgtgttgcaggcaccagttctaaagaagtaccctgctaggctctccgtcacctccta 766
Query: 531 cacctgcttctt 542
||| || |||||
Sbjct: 767 cacttgtttctt 778
>gb|DT497441.1|DT497441 WS01126.BR_H18 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01126_H18 5', mRNA sequence
Length = 898
Score = 65.9 bits (33), Expect = 2e-009
Identities = 107/132 (81%)
Strand = Plus / Plus
Query: 411 caagaactggacgctgggntgcgtgtacctgatcgggcactgcctgtcgtggtccggctg 470
|||||||||||| || || ||| | ||||| || || || |||||||| ||||| || ||
Sbjct: 648 caagaactggacccttggttgcctctacctcattggccattgcctgtcctggtctggttg 707
Query: 471 gctggtgctgcaggctcccgtgctgaagaagtacccggcacggctggccgtcacctccta 530
||| ||| ||||||| || || || ||||||||||| || |||| |||||||||||||
Sbjct: 708 gcttgtgttgcaggcaccagttctaaagaagtaccctgctaggctctccgtcacctccta 767
Query: 531 cacctgcttctt 542
||| || |||||
Sbjct: 768 cacttgtttctt 779
>gb|DT498500.1|DT498500 WS0115.BR_I15 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0115_I15
5', mRNA sequence
Length = 589
Score = 65.9 bits (33), Expect = 2e-009
Identities = 107/132 (81%)
Strand = Plus / Plus
Query: 411 caagaactggacgctgggntgcgtgtacctgatcgggcactgcctgtcgtggtccggctg 470
|||||||||||| || || ||| | ||||| || || || |||||||| ||||| || ||
Sbjct: 146 caagaactggacccttggttgcctctacctcattggccattgcctgtcctggtctggttg 205
Query: 471 gctggtgctgcaggctcccgtgctgaagaagtacccggcacggctggccgtcacctccta 530
||| ||| ||||||| || || || ||||||||||| || |||| |||||||||||||
Sbjct: 206 gcttgtgttgcaggcaccagttctaaagaagtaccctgctaggctctccgtcacctccta 265
Query: 531 cacctgcttctt 542
||| || |||||
Sbjct: 266 cacttgtttctt 277
>gb|AI166624.1|AI166624 xylem.est.438 Poplar xylem Lambda ZAPII library Populus trichocarpa
cDNA 5', mRNA sequence
Length = 315
Score = 60.0 bits (30), Expect = 9e-008
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 133 aaccaagggttttacctcctgggcctggacaacacgtcgccgacgttcgcgtccgccatc 192
|||||||| || ||| | ||||||||||| |||||||| || || ||||| || || |||
Sbjct: 87 aaccaaggattctacttgctgggcctggaaaacacgtctccaactttcgcatcagcaatc 146
Query: 193 cagaactcggtcccggccatcacctt 218
|| ||||| ||||| |||||||||||
Sbjct: 147 caaaactctgtccctgccatcacctt 172
>gb|CN519480.1|CN519480 GQ0102.B3_O08 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0102_O08 5', mRNA sequence
Length = 555
Score = 60.0 bits (30), Expect = 9e-008
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 133 aaccaagggttttacctcctgggcctggacaacacgtcgccgacgttcgcgtccgccatc 192
|||||||| || ||| | ||||||||||| |||||||| || || ||||| || || |||
Sbjct: 357 aaccaaggattctacttgctgggcctggaaaacacgtctccaactttcgcatcagcaatc 416
Query: 193 cagaactcggtcccggccatcacctt 218
|| ||||| ||||| |||||||||||
Sbjct: 417 caaaactctgtccctgccatcacctt 442
>gb|CN519798.1|CN519798 GQ0108.B3_G24 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0108_G24 5', mRNA sequence
Length = 801
Score = 60.0 bits (30), Expect = 9e-008
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 133 aaccaagggttttacctcctgggcctggacaacacgtcgccgacgttcgcgtccgccatc 192
|||||||| || ||| | ||||||||||| |||||||| || || ||||| || || |||
Sbjct: 353 aaccaaggattctacttgctgggcctggaaaacacgtctccaactttcgcatcagcaatc 412
Query: 193 cagaactcggtcccggccatcacctt 218
|| ||||| ||||| |||||||||||
Sbjct: 413 caaaactctgtccctgccatcacctt 438
>gb|CN519835.1|CN519835 GQ0105.B3_O03 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0105_O03 5', mRNA sequence
Length = 762
Score = 60.0 bits (30), Expect = 9e-008
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 133 aaccaagggttttacctcctgggcctggacaacacgtcgccgacgttcgcgtccgccatc 192
|||||||| || ||| | ||||||||||| |||||||| || || ||||| || || |||
Sbjct: 351 aaccaaggattctacttgctgggcctggaaaacacgtctccaactttcgcatcagcaatc 410
Query: 193 cagaactcggtcccggccatcacctt 218
|| ||||| ||||| |||||||||||
Sbjct: 411 caaaactctgtccctgccatcacctt 436
>gb|CN520449.1|CN520449 GQ0105.B3_C13 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0105_C13 5', mRNA sequence
Length = 802
Score = 60.0 bits (30), Expect = 9e-008
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 133 aaccaagggttttacctcctgggcctggacaacacgtcgccgacgttcgcgtccgccatc 192
|||||||| || ||| | ||||||||||| |||||||| || || ||||| || || |||
Sbjct: 352 aaccaaggattctacttgctgggcctggaaaacacgtctccaactttcgcatcagcaatc 411
Query: 193 cagaactcggtcccggccatcacctt 218
|| ||||| ||||| |||||||||||
Sbjct: 412 caaaactctgtccctgccatcacctt 437
>gb|CN549336.1|CN549336 GQ0241.B3_K23 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0241_K23 5', mRNA sequence
Length = 795
Score = 60.0 bits (30), Expect = 9e-008
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 133 aaccaagggttttacctcctgggcctggacaacacgtcgccgacgttcgcgtccgccatc 192
|||||||| || ||| | ||||||||||| |||||||| || || ||||| || || |||
Sbjct: 347 aaccaaggattctacttgctgggcctggaaaacacgtctccaactttcgcatcagcaatc 406
Query: 193 cagaactcggtcccggccatcacctt 218
|| ||||| ||||| |||||||||||
Sbjct: 407 caaaactctgtccctgccatcacctt 432
>gb|AJ774331.1|AJ774331 AJ774331 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300015H11F1, mRNA sequence
Length = 389
Score = 60.0 bits (30), Expect = 9e-008
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 133 aaccaagggttttacctcctgggcctggacaacacgtcgccgacgttcgcgtccgccatc 192
|||||||| || ||| | ||||||||||| |||||||| || || ||||| || || |||
Sbjct: 249 aaccaaggattctacttgctgggcctggaaaacacgtctccaactttcgcatcagcaatc 308
Query: 193 cagaactcggtcccggccatcacctt 218
|| ||||| ||||| |||||||||||
Sbjct: 309 caaaactctgtccctgccatcacctt 334
>gb|AJ779102.1|AJ779102 AJ779102 Populus euphratica cambium 3-6 months Populus euphratica
cDNA clone P0000600011E03F1, mRNA sequence
Length = 434
Score = 60.0 bits (30), Expect = 9e-008
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 133 aaccaagggttttacctcctgggcctggacaacacgtcgccgacgttcgcgtccgccatc 192
|||||||| || ||| | ||||||||||| |||||||| || || ||||| || || |||
Sbjct: 343 aaccaaggattctacttgctgggcctggaaaacacgtctccaactttcgcatcagcaatc 402
Query: 193 cagaactcggtcccggccatcacctt 218
|| ||||| ||||| |||||||||||
Sbjct: 403 caaaactctgtccctgccatcacctt 428
>gb|CX172646.1|CX172646 D05_69-5_07.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 715
Score = 60.0 bits (30), Expect = 9e-008
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 133 aaccaagggttttacctcctgggcctggacaacacgtcgccgacgttcgcgtccgccatc 192
|||||||| || ||| | ||||||||||| |||||||| || || ||||| || || |||
Sbjct: 364 aaccaaggattctacttgctgggcctggaaaacacgtctccaactttcgcatcagcaatc 423
Query: 193 cagaactcggtcccggccatcacctt 218
|| ||||| ||||| |||||||||||
Sbjct: 424 caaaactctgtccctgccatcacctt 449
>gb|BP924831.1|BP924831 BP924831 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-037_B08.f 5', mRNA sequence
Length = 522
Score = 60.0 bits (30), Expect = 9e-008
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 133 aaccaagggttttacctcctgggcctggacaacacgtcgccgacgttcgcgtccgccatc 192
|||||||| || ||| | ||||||||||| |||||||| || || ||||| || || |||
Sbjct: 210 aaccaaggattctacttgctgggcctggaaaacacgtctccaactttcgcatcagcaatc 269
Query: 193 cagaactcggtcccggccatcacctt 218
|| ||||| ||||| |||||||||||
Sbjct: 270 caaaactctgtccctgccatcacctt 295
>gb|DT473381.1|DT473381 WS01229.BR_H19 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01229_H19 5', mRNA sequence
Length = 787
Score = 60.0 bits (30), Expect = 9e-008
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 133 aaccaagggttttacctcctgggcctggacaacacgtcgccgacgttcgcgtccgccatc 192
|||||||| || ||| | ||||||||||| |||||||| || || ||||| || || |||
Sbjct: 365 aaccaaggattctacttgctgggcctggaaaacacgtctccaactttcgcatcagcaatc 424
Query: 193 cagaactcggtcccggccatcacctt 218
|| ||||| ||||| |||||||||||
Sbjct: 425 caaaactctgtccctgccatcacctt 450
Score = 50.1 bits (25), Expect = 9e-005
Identities = 105/132 (79%)
Strand = Plus / Plus
Query: 411 caagaactggacgctgggntgcgtgtacctgatcgggcactgcctgtcgtggtccggctg 470
|||||||||||| || || ||| | ||||| || || || ||| |||| ||||| || ||
Sbjct: 646 caagaactggacccttggttgcatctacctcattggccattgcttgtcctggtctggttg 705
Query: 471 gctggtgctgcaggctcccgtgctgaagaagtacccggcacggctggccgtcacctccta 530
||| ||| ||||||| || | |||||||||||||| || |||| | |||||||| ||
Sbjct: 706 gcttgtgttgcaggcaccatttctgaagaagtaccccgcgaggctctcggtcacctctta 765
Query: 531 cacctgcttctt 542
|||||| |||||
Sbjct: 766 cacctgtttctt 777
>gb|DT494517.1|DT494517 WS01118.BR.1_K12 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01118_K12 5', mRNA sequence
Length = 890
Score = 60.0 bits (30), Expect = 9e-008
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 133 aaccaagggttttacctcctgggcctggacaacacgtcgccgacgttcgcgtccgccatc 192
|||||||| || ||| | ||||||||||| |||||||| || || ||||| || || |||
Sbjct: 365 aaccaaggattctacttgctgggcctggaaaacacgtctccaactttcgcatcagcaatc 424
Query: 193 cagaactcggtcccggccatcacctt 218
|| ||||| ||||| |||||||||||
Sbjct: 425 caaaactctgtccctgccatcacctt 450
Score = 58.0 bits (29), Expect = 4e-007
Identities = 106/132 (80%)
Strand = Plus / Plus
Query: 411 caagaactggacgctgggntgcgtgtacctgatcgggcactgcctgtcgtggtccggctg 470
|||||||||||| || || ||| | ||||| || || || ||| |||| ||||| || ||
Sbjct: 646 caagaactggacccttggttgcatctacctcattggccattgcttgtcctggtctggttg 705
Query: 471 gctggtgctgcaggctcccgtgctgaagaagtacccggcacggctggccgtcacctccta 530
||| ||| ||||||| || || |||||||||||||| || |||| | |||||||| ||
Sbjct: 706 gcttgtgttgcaggcaccagttctgaagaagtaccctgcgaggctctcggtcacctctta 765
Query: 531 cacctgcttctt 542
|||||| |||||
Sbjct: 766 cacctgtttctt 777
>gb|DT494930.1|DT494930 WS01119.BR_N16 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01119_N16 5', mRNA sequence
Length = 762
Score = 60.0 bits (30), Expect = 9e-008
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 133 aaccaagggttttacctcctgggcctggacaacacgtcgccgacgttcgcgtccgccatc 192
|||||||| || ||| | ||||||||||| |||||||| || || ||||| || || |||
Sbjct: 367 aaccaaggattctacttgctgggcctggaaaacacgtctccaactttcgcatcagcaatc 426
Query: 193 cagaactcggtcccggccatcacctt 218
|| ||||| ||||| |||||||||||
Sbjct: 427 caaaactctgtccctgccatcacctt 452
>gb|DT496457.1|DT496457 WS01123.BR_H12 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01123_H12 5', mRNA sequence
Length = 897
Score = 60.0 bits (30), Expect = 9e-008
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 133 aaccaagggttttacctcctgggcctggacaacacgtcgccgacgttcgcgtccgccatc 192
|||||||| || ||| | ||||||||||| |||||||| || || ||||| || || |||
Sbjct: 367 aaccaaggattctacttgctgggcctggaaaacacgtctccaactttcgcatcagcaatc 426
Query: 193 cagaactcggtcccggccatcacctt 218
|| ||||| ||||| |||||||||||
Sbjct: 427 caaaactctgtccctgccatcacctt 452
Score = 58.0 bits (29), Expect = 4e-007
Identities = 106/132 (80%)
Strand = Plus / Plus
Query: 411 caagaactggacgctgggntgcgtgtacctgatcgggcactgcctgtcgtggtccggctg 470
|||||||||||| || || ||| | ||||| || || || ||| |||| ||||| || ||
Sbjct: 648 caagaactggacccttggttgcatctacctcattggccattgcttgtcctggtctggttg 707
Query: 471 gctggtgctgcaggctcccgtgctgaagaagtacccggcacggctggccgtcacctccta 530
||| ||| ||||||| || || |||||||||||||| || |||| | |||||||| ||
Sbjct: 708 gcttgtgttgcaggcaccagttctgaagaagtaccctgcgaggctctcggtcacctctta 767
Query: 531 cacctgcttctt 542
|||||| |||||
Sbjct: 768 cacctgtttctt 779
>gb|DT498674.1|DT498674 WS0116.BR_A20 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0116_A20
5', mRNA sequence
Length = 539
Score = 60.0 bits (30), Expect = 9e-008
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 133 aaccaagggttttacctcctgggcctggacaacacgtcgccgacgttcgcgtccgccatc 192
|||||||| || ||| | ||||||||||| |||||||| || || ||||| || || |||
Sbjct: 367 aaccaaggattctacttgctgggcctggaaaacacgtctccaactttcgcatcagcaatc 426
Query: 193 cagaactcggtcccggccatcacctt 218
|| ||||| ||||| |||||||||||
Sbjct: 427 caaaactctgtccctgccatcacctt 452
>gb|DT499119.1|DT499119 WS0117.BR_F17 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0117_F17
5', mRNA sequence
Length = 539
Score = 60.0 bits (30), Expect = 9e-008
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 133 aaccaagggttttacctcctgggcctggacaacacgtcgccgacgttcgcgtccgccatc 192
|||||||| || ||| | ||||||||||| |||||||| || || ||||| || || |||
Sbjct: 367 aaccaaggattctacttgctgggcctggaaaacacgtctccaactttcgcatcagcaatc 426
Query: 193 cagaactcggtcccggccatcacctt 218
|| ||||| ||||| |||||||||||
Sbjct: 427 caaaactctgtccctgccatcacctt 452
>gb|DT499142.1|DT499142 WS0117.BR_G23 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0117_G23
5', mRNA sequence
Length = 628
Score = 60.0 bits (30), Expect = 9e-008
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 133 aaccaagggttttacctcctgggcctggacaacacgtcgccgacgttcgcgtccgccatc 192
|||||||| || ||| | ||||||||||| |||||||| || || ||||| || || |||
Sbjct: 367 aaccaaggattctacttgctgggcctggaaaacacgtctccaactttcgcatcagcaatc 426
Query: 193 cagaactcggtcccggccatcacctt 218
|| ||||| ||||| |||||||||||
Sbjct: 427 caaaactctgtccctgccatcacctt 452
>gb|DT499957.1|DT499957 WS9991.BR_N04 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01111_N01 5', mRNA sequence
Length = 512
Score = 60.0 bits (30), Expect = 9e-008
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 133 aaccaagggttttacctcctgggcctggacaacacgtcgccgacgttcgcgtccgccatc 192
|||||||| || ||| | ||||||||||| |||||||| || || ||||| || || |||
Sbjct: 367 aaccaaggattctacttgctgggcctggaaaacacgtctccaactttcgcatcagcaatc 426
Query: 193 cagaactcggtcccggccatcacctt 218
|| ||||| ||||| |||||||||||
Sbjct: 427 caaaactctgtccctgccatcacctt 452
>gb|DV462895.1|DV462895 MTUNUL1.P1.B03 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 810
Score = 60.0 bits (30), Expect = 9e-008
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 133 aaccaagggttttacctcctgggcctggacaacacgtcgccgacgttcgcgtccgccatc 192
|||||||| || ||| | ||||||||||| |||||||| || || ||||| || || |||
Sbjct: 368 aaccaaggattctacttgctgggcctggaaaacacgtctccaactttcgcatcagcaatc 427
Query: 193 cagaactcggtcccggccatcacctt 218
|| ||||| ||||| |||||||||||
Sbjct: 428 caaaactctgtccctgccatcacctt 453
Score = 46.1 bits (23), Expect = 0.001
Identities = 104/132 (78%)
Strand = Plus / Plus
Query: 411 caagaactggacgctgggntgcgtgtacctgatcgggcactgcctgtcgtggtccggctg 470
|||||||||||| || || ||| | ||||| || || || ||| |||| || || || ||
Sbjct: 649 caagaactggacccttggttgcatctacctcattggccattgcttgtcctgntctggttg 708
Query: 471 gctggtgctgcaggctcccgtgctgaagaagtacccggcacggctggccgtcacctccta 530
||| ||| |||| || || || |||||||||||||| || |||| | |||||||| ||
Sbjct: 709 gcttgtgttgcangcaccagttctgaagaagtaccctgcgaggctctcggtcacctctta 768
Query: 531 cacctgcttctt 542
|||||| |||||
Sbjct: 769 cacctgtttctt 780
>gb|DV463191.1|DV463191 MTUNUL1.P12.H03 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 687
Score = 60.0 bits (30), Expect = 9e-008
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 133 aaccaagggttttacctcctgggcctggacaacacgtcgccgacgttcgcgtccgccatc 192
|||||||| || ||| | ||||||||||| |||||||| || || ||||| || || |||
Sbjct: 357 aaccaaggattctacttgctgggcctggaaaacacgtctccaactttcgcatcagcaatc 416
Query: 193 cagaactcggtcccggccatcacctt 218
|| ||||| ||||| |||||||||||
Sbjct: 417 caaaactctgtccctgccatcacctt 442
>gb|CV247583.1|CV247583 WS01118.B21_K12 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01118_K12 3', mRNA sequence
Length = 723
Score = 58.0 bits (29), Expect = 4e-007
Identities = 106/132 (80%)
Strand = Plus / Minus
Query: 411 caagaactggacgctgggntgcgtgtacctgatcgggcactgcctgtcgtggtccggctg 470
|||||||||||| || || ||| | ||||| || || || ||| |||| ||||| || ||
Sbjct: 649 caagaactggacccttggttgcatctacctcattggccattgcttgtcctggtctggttg 590
Query: 471 gctggtgctgcaggctcccgtgctgaagaagtacccggcacggctggccgtcacctccta 530
||| ||| ||||||| || || |||||||||||||| || |||| | |||||||| ||
Sbjct: 589 gcttgtgttgcaggcaccagttctgaagaagtaccctgcgaggctctcggtcacctctta 530
Query: 531 cacctgcttctt 542
|||||| |||||
Sbjct: 529 cacctgtttctt 518
>gb|CV250352.1|CV250352 WS0113.B21_E19 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS0113_E19 3', mRNA sequence
Length = 675
Score = 58.0 bits (29), Expect = 4e-007
Identities = 106/132 (80%)
Strand = Plus / Minus
Query: 411 caagaactggacgctgggntgcgtgtacctgatcgggcactgcctgtcgtggtccggctg 470
|||||||||||| || || ||| | ||||| || || || ||| |||| ||||| || ||
Sbjct: 650 caagaactggacccttggttgcatctacctcattggccattgcttgtcctggtctggttg 591
Query: 471 gctggtgctgcaggctcccgtgctgaagaagtacccggcacggctggccgtcacctccta 530
||| ||| ||||||| || || |||||||||||||| || |||| | |||||||| ||
Sbjct: 590 gcttgtgttgcaggcaccagttctgaagaagtaccccgcgaggctctcggtcacctctta 531
Query: 531 cacctgcttctt 542
|||||| |||||
Sbjct: 530 cacctgtttctt 519
>gb|CV272803.1|CV272803 WS0158.B21_M04 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0158_M04 3', mRNA sequence
Length = 736
Score = 58.0 bits (29), Expect = 4e-007
Identities = 106/132 (80%)
Strand = Plus / Minus
Query: 411 caagaactggacgctgggntgcgtgtacctgatcgggcactgcctgtcgtggtccggctg 470
|||||||||||| || || ||| | ||||| || || || ||| |||| ||||| || ||
Sbjct: 442 caagaactggacccttggttgcatctacctcattggccattgcttgtcctggtctggttg 383
Query: 471 gctggtgctgcaggctcccgtgctgaagaagtacccggcacggctggccgtcacctccta 530
||| ||| ||||||| || || |||||||||||||| || |||| | |||||||| ||
Sbjct: 382 gcttgtgttgcaggcaccagttctgaagaagtaccctgcgaggctctcggtcacctctta 323
Query: 531 cacctgcttctt 542
|||||| |||||
Sbjct: 322 cacctgtttctt 311
Score = 46.1 bits (23), Expect = 0.001
Identities = 72/87 (82%), Gaps = 1/87 (1%)
Strand = Plus / Minus
Query: 133 aaccaagggttttacctcctgggcctggacaacacgtcgccgac-gttcgcgtccgccat 191
|||||||| || ||| | ||||||||||| |||||||| || || ||||| || || ||
Sbjct: 725 aaccaaggattctacttgctgggcctggaaaacacgtctccaacttttcgcatcagcaat 666
Query: 192 ccagaactcggtcccggccatcacctt 218
||| ||||| ||||| |||||||||||
Sbjct: 665 ccaaaactctgtccctgccatcacctt 639
>gb|DT476405.1|DT476405 WS01229.B21_H19 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01229_H19 3', mRNA sequence
Length = 856
Score = 58.0 bits (29), Expect = 4e-007
Identities = 106/132 (80%)
Strand = Plus / Minus
Query: 411 caagaactggacgctgggntgcgtgtacctgatcgggcactgcctgtcgtggtccggctg 470
|||||||||||| || || ||| | ||||| || || || ||| |||| ||||| || ||
Sbjct: 650 caagaactggacccttggttgcatctacctcattggccattgcttgtcctggtctggttg 591
Query: 471 gctggtgctgcaggctcccgtgctgaagaagtacccggcacggctggccgtcacctccta 530
||| ||| ||||||| || || |||||||||||||| || |||| | |||||||| ||
Sbjct: 590 gcttgtgttgcaggcaccagttctgaagaagtaccccgcgaggctctcggtcacctctta 531
Query: 531 cacctgcttctt 542
|||||| |||||
Sbjct: 530 cacctgtttctt 519
>gb|DT523804.1|DT523804 WS02040.B21_L01 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02040_L01 3', mRNA sequence
Length = 706
Score = 58.0 bits (29), Expect = 4e-007
Identities = 106/132 (80%)
Strand = Plus / Minus
Query: 411 caagaactggacgctgggntgcgtgtacctgatcgggcactgcctgtcgtggtccggctg 470
|||||||||||| || || ||| | ||||| || || || ||| |||| ||||| || ||
Sbjct: 649 caagaactggacccttggttgcctctacctcattggccattgcttgtcctggtctgggtg 590
Query: 471 gctggtgctgcaggctcccgtgctgaagaagtacccggcacggctggccgtcacctccta 530
||| ||| ||||||| || || || ||||||||||| || |||| |||||||||||||
Sbjct: 589 gcttgtgttgcaggcaccagttctaaagaagtaccctgctaggctctccgtcacctccta 530
Query: 531 cacctgcttctt 542
||| || |||||
Sbjct: 529 cacttgtttctt 518
>gb|AI162110.1|AI162110 A012P31U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 412
Score = 56.0 bits (28), Expect = 1e-006
Identities = 73/88 (82%)
Strand = Plus / Plus
Query: 455 tgtcgtggtccggctggctggtgctgcaggctcccgtgctgaagaagtacccggcacggc 514
|||| ||||| |||||||| ||| ||||||| || || |||||||||||||| || |||
Sbjct: 106 tgtcctggtctggctggcttgtgttgcaggcaccagttctgaagaagtaccctgctaggc 165
Query: 515 tggccgtcacctcctacacctgcttctt 542
| | |||||||| |||||||| |||||
Sbjct: 166 tctcggtcacctcttacacctgtttctt 193
>gb|CA934542.1|CA934542 MTU3TS.P9.B09 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 390
Score = 56.0 bits (28), Expect = 1e-006
Identities = 73/88 (82%)
Strand = Plus / Minus
Query: 455 tgtcgtggtccggctggctggtgctgcaggctcccgtgctgaagaagtacccggcacggc 514
|||| ||||| |||||||| ||| ||||||| || || |||||||||||||| || |||
Sbjct: 218 tgtcctggtctggctggcttgtgttgcaggcaccagttctgaagaagtaccctgctaggc 159
Query: 515 tggccgtcacctcctacacctgcttctt 542
| | |||||||| |||||||| |||||
Sbjct: 158 tctcggtcacctcttacacctgtttctt 131
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 42,209
Number of Sequences: 369679
Number of extensions: 42209
Number of successful extensions: 12342
Number of sequences better than 0.5: 85
Number of HSP's better than 0.5 without gapping: 85
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 12167
Number of HSP's gapped (non-prelim): 141
length of query: 559
length of database: 203,408,664
effective HSP length: 19
effective length of query: 540
effective length of database: 196,384,763
effective search space: 106047772020
effective search space used: 106047772020
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)