BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3713013.2.1
(3807 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY055724.2| Populus tremuloides cellulose synthase (CesA... 452 e-125
gb|CA931952.1|CA931952 MTU4TA.P25.A10 Aspen apex cDNA Libra... 299 4e-079
gb|BP924070.1|BP924070 BP924070 full-length enriched poplar... 293 3e-077
gb|CN549808.1|CN549808 GQ0241.B3_H11 GQ024 Populus trichoca... 280 4e-073
gb|CX169886.1|CX169886 G10_69-94_14.ab1 leaf inoculated wit... 266 6e-069
gb|CA932078.1|CA932078 MTU4TA.P26.F03 Aspen apex cDNA Libra... 260 4e-067
gb|CA930801.1|CA930801 MTU2TA.P10.D08 Aspen apex cDNA Libra... 228 1e-057
gb|DT473511.1|DT473511 WS01229.BR_N17 PT-GT-FL-A-3 Populus ... 206 5e-051
gb|AJ779945.1|AJ779945 AJ779945 Populus euphratica root 3-6... 180 3e-043
gb|CN524693.1|CN524693 GQ015M08.T3_H02 GQ015 Populus tricho... 178 1e-042
gb|AJ779545.1|AJ779545 AJ779545 Populus euphratica root 3-6... 172 6e-041
gb|AY162181.1| Populus tremuloides cellulose synthase (CesA... 172 6e-041
gb|BU823358.1|BU823358 UB51DPD11 Populus tremula cambium cD... 170 3e-040
gb|CF234438.1|CF234438 Ptajxojxo2F10F1012 Poplar cDNA libra... 157 4e-036
gb|CA927446.1|CA927446 MTU6CR.P9.B04 Aspen root cDNA Librar... 153 6e-035
gb|AJ778214.1|AJ778214 AJ778214 Populus euphratica root 3-6... 149 9e-034
gb|AY330165.1| Populus tremuloides CesA5A-like mRNA, partia... 147 4e-033
gb|AY196961.1| Populus tremuloides cellulose synthase 6 (Ce... 139 9e-031
gb|CV130875.1|CV130875 X9SP07b02 Populus stem seasonal libr... 129 9e-028
gb|CV244615.1|CV244615 WS0255.B21_C09 PT-MB-N-A-15 Populus ... 129 9e-028
gb|DT489371.1|DT489371 WS02542.B21_A18 PT-MB-N-A-15 Populus... 129 9e-028
gb|CN518195.1|CN518195 GQ0092.B3_P04 GQ009 Populus trichoca... 127 3e-027
gb|AY095297.1| Populus tremuloides cellulose synthase (CesA... 123 5e-026
gb|AY573572.1| Populus tremula x Populus tremuloides cellul... 123 5e-026
gb|AJ778476.1|AJ778476 AJ778476 Populus euphratica cambium ... 121 2e-025
gb|CK107258.1|CK107258 UB51DPD11.5pR Populus active cambium... 119 8e-025
gb|AY162180.1| Populus tremuloides cellulose synthase (CesA... 119 8e-025
gb|CA934196.1|CA934196 MTU3TS.P4.D08 Aspen stem cDNA Librar... 113 5e-023
gb|CF235713.1|CF235713 PtaJXT0026B7B0703 Poplar cDNA librar... 105 1e-020
gb|AJ771596.1|AJ771596 AJ771596 Populus euphratica root 3-6... 105 1e-020
gb|AY573573.2| Populus tremula x Populus tremuloides cellul... 105 1e-020
gb|CN522480.1|CN522480 GQ0123.B3_H17 GQ012 Populus trichoca... 100 8e-019
gb|CV227790.1|CV227790 WS0168.B21_D13 PT-DX-A-7 Populus tri... 96 1e-017
gb|DT493580.1|DT493580 WS0111.BR_M17 PT-P-FL-A-2 Populus tr... 96 1e-017
gb|AY573575.1| Populus tremula x Populus tremuloides cellul... 96 1e-017
gb|AJ777820.1|AJ777820 AJ777820 Populus euphratica root 3-6... 94 5e-017
gb|CF229283.1|CF229283 PtaXM0023E4E0410 Poplar cDNA library... 92 2e-016
gb|CK092703.1|CK092703 G092P25.3pR Populus tension wood cDN... 88 3e-015
gb|CK102806.1|CK102806 G092P25.5pR Populus tension wood cDN... 88 3e-015
gb|CV242542.1|CV242542 WS02515.B21_F16 PT-MB-N-A-15 Populus... 88 3e-015
gb|AF081534.1|AF081534 Populus x canescens cellulose syntha... 88 3e-015
gb|CN520281.1|CN520281 GQ0105.B3_A14 GQ010 Populus trichoca... 86 1e-014
gb|AF527387.1| Populus tremuloides xylem-specific cellulose... 86 1e-014
gb|AY573571.1| Populus tremula x Populus tremuloides cellul... 86 1e-014
gb|BU817734.1|BU817734 UA20CPD09 Populus tremula cambium cD... 84 5e-014
gb|CV268371.1|CV268371 WS0205.B21_E18 PTxN-IB-N-A-11 Populu... 84 5e-014
gb|AY573574.1| Populus tremula x Populus tremuloides cellul... 82 2e-013
gb|CK097446.1|CK097446 UB51DPD11.3pR Populus active cambium... 80 7e-013
gb|CK318831.1|CK318831 X9P03h01 Populus stem seasonal libra... 80 7e-013
gb|CV252351.1|CV252351 PX0011.B21_G15 PT-X-FL-A-1 Populus t... 80 7e-013
gb|CV262834.1|CV262834 WS0202.B21_K05 PTxN-IB-N-A-11 Populu... 80 7e-013
gb|CV282433.1|CV282433 WS0184.B21_J19 PTxD-IL-N-A-9 Populus... 80 7e-013
gb|DT493063.1|DT493063 WS02553.C21_E11 PT-MB-N-A-15 Populus... 80 7e-013
gb|DT500468.1|DT500468 PX0015.BR_I21 PT-X-FL-A-1 Populus tr... 80 7e-013
gb|AF417485.1| Populus tremuloides cellulose synthase (CesA... 80 7e-013
gb|CA926289.1|CA926289 MTU6CR.P13.C05 Aspen root cDNA Libra... 78 3e-012
gb|CF232388.1|CF232388 PtaJXO0009H2H0216 Poplar cDNA librar... 78 3e-012
gb|CF235321.1|CF235321 PtaJXT0021D9D0907 Poplar cDNA librar... 78 3e-012
gb|AJ774508.1|AJ774508 AJ774508 Populus euphratica shoot 3-... 76 1e-011
gb|AJ775294.1|AJ775294 AJ775294 Populus euphratica shoot 3-... 76 1e-011
gb|AJ775532.1|AJ775532 AJ775532 Populus euphratica shoot 3-... 76 1e-011
gb|CV229552.1|CV229552 WS01913.B21_K14 PT-DX-N-A-10 Populus... 76 1e-011
gb|CF237222.1|CF237222 Ptajxtjxt3E10E1010 Poplar cDNA libra... 72 2e-010
gb|AF072131.1|AF072131 Populus tremuloides secondary xylem ... 72 2e-010
gb|DQ004570.1| Populus tomentosa cellulose synthase (cesa1)... 72 2e-010
gb|CK087778.1|CK087778 A020P56.3pR Hybrid aspen plasmid lib... 70 7e-010
gb|BI128217.1|BI128217 G072P74Y Populus cambium cDNA librar... 68 3e-009
gb|BU870116.1|BU870116 Q008I09 Populus flower cDNA library ... 68 3e-009
gb|CF229941.1|CF229941 PtaC0001G4G0414 Poplar cDNA library ... 68 3e-009
gb|CK100621.1|CK100621 C057P32.5pR Populus strain T89 leave... 68 3e-009
gb|CK102305.1|CK102305 G072P74.5pR Populus tension wood cDN... 68 3e-009
gb|CK111062.1|CK111062 Q008E05 Populus dormant bud cDNA lib... 68 3e-009
gb|CK320732.1|CK320732 X9SP01b11 Populus stem seasonal libr... 68 3e-009
gb|AJ778410.1|AJ778410 AJ778410 Populus euphratica cambium ... 68 3e-009
gb|CV273968.1|CV273968 WS01712.B21_M13 PTxD-NR-A-8 Populus ... 68 3e-009
gb|DT509821.1|DT509821 WS02424.BR_N10 PTxD-ICC-N-A-14 Popul... 68 3e-009
gb|BI131187.1|BI131187 G116P69Y Populus cambium cDNA librar... 66 1e-008
gb|CA926496.1|CA926496 MTU6CR.P15.F11 Aspen root cDNA Libra... 64 4e-008
gb|CA926817.1|CA926817 MTU6CR.P1.E04 Aspen root cDNA Librar... 64 4e-008
gb|CK092951.1|CK092951 G101P46.3pR Populus tension wood cDN... 64 4e-008
gb|CV252662.1|CV252662 PX0015.B21_I21 PT-X-FL-A-1 Populus t... 64 4e-008
gb|DV465848.1|DV465848 MTUNUL1.P43.H11 NUL Populus fremonti... 62 2e-007
gb|BU897746.1|BU897746 X067G02 Populus wood cDNA library Po... 60 7e-007
gb|CF232837.1|CF232837 PtaJXO0016D5D0507 Poplar cDNA librar... 60 7e-007
gb|CN550567.1|CN550567 GQ0241.B3_I15 GQ024 Populus trichoca... 60 7e-007
gb|DT487943.1|DT487943 WS02535.B21_B11 PT-MB-N-A-15 Populus... 60 7e-007
gb|DT523570.1|DT523570 WS02040.B21_A19 PTxN-IB-N-A-11 Popul... 60 7e-007
gb|DV466097.1|DV466097 MTUNUL1.P47.C03 NUL Populus fremonti... 60 7e-007
gb|BU879588.1|BU879588 V062A11 Populus flower cDNA library ... 56 1e-005
gb|BU895617.1|BU895617 X028D07 Populus wood cDNA library Po... 56 1e-005
gb|CF227502.1|CF227502 PtaD6G2G0214 Poplar cDNA library fro... 56 1e-005
gb|CF229078.1|CF229078 PtaXM0021A1A0101 Poplar cDNA library... 56 1e-005
gb|CF236447.1|CF236447 PtaJXT2H2H0216 Poplar cDNA library f... 56 1e-005
gb|CN519879.1|CN519879 GQ0108.B3_I06 GQ010 Populus trichoca... 56 1e-005
gb|CV234217.1|CV234217 WS01214.B21_B13 PT-GT-FL-A-3 Populus... 56 1e-005
gb|CV235270.1|CV235270 WS01218.B21_H07 PT-GT-FL-A-3 Populus... 56 1e-005
gb|CV238245.1|CV238245 WS0125.B21_N16 PT-GT-FL-A-3 Populus ... 56 1e-005
gb|CV238311.1|CV238311 WS0126.B21_C03 PT-GT-FL-A-3 Populus ... 56 1e-005
gb|BP927588.1|BP927588 BP927588 full-length enriched poplar... 56 1e-005
gb|DN502245.1|DN502245 V062A11.5pR Populus male catkins cDN... 56 1e-005
gb|DT475055.1|DT475055 WS0125.BR_N16 PT-GT-FL-A-3 Populus t... 56 1e-005
gb|DT476519.1|DT476519 WS01229.B21_N17 PT-GT-FL-A-3 Populus... 56 1e-005
gb|DT507297.1|DT507297 WS02417.BR_O04 PTxD-ICC-N-A-14 Popul... 56 1e-005
gb|AY330166.1| Populus tremuloides CesA7A-like mRNA, partia... 56 1e-005
gb|BI127228.1|BI127228 G057P27Y Populus cambium cDNA librar... 54 4e-005
gb|BI130668.1|BI130668 G109P08Y Populus cambium cDNA librar... 54 4e-005
gb|CF232701.1|CF232701 PtaJXO0014G1G0113 Poplar cDNA librar... 54 4e-005
gb|CK091716.1|CK091716 F120P33.3pR Populus flower cDNA libr... 54 4e-005
gb|CK101805.1|CK101805 F120P33.5pR Populus flower cDNA libr... 54 4e-005
gb|CF237106.1|CF237106 Ptajxtjxt2B1B0103 Poplar cDNA librar... 52 2e-004
gb|CK116718.1|CK116718 B016P26 Hybrid aspen plasmid library... 52 2e-004
gb|CN523759.1|CN523759 GQ015M04.T3_A09 GQ015 Populus tricho... 52 2e-004
gb|CX176036.1|CX176036 D10_69-18_08.ab1 leaf inoculated wit... 52 2e-004
gb|DT500162.1|DT500162 PX0011.BR_G15 PT-X-FL-A-1 Populus tr... 52 2e-004
gb|DV466748.1|DV466748 MTUNUL1.P9.G02 NUL Populus fremontii... 52 2e-004
gb|AI163338.1|AI163338 A040P09U Hybrid aspen plasmid librar... 50 6e-004
gb|BI138973.1|BI138973 F120P33Y Populus flower cDNA library... 50 6e-004
gb|BU897991.1|BU897991 X073A11 Populus wood cDNA library Po... 50 6e-004
gb|CB239511.1|CB239511 RSH12F10 two-month-old roots from cl... 50 6e-004
gb|CF233149.1|CF233149 PtaJXO0019H4H0416 Poplar cDNA librar... 48 0.003
gb|CK102299.1|CK102299 G072P58.5pR Populus tension wood cDN... 48 0.003
gb|BP923939.1|BP923939 BP923939 full-length enriched poplar... 48 0.003
gb|BP928099.1|BP928099 BP928099 full-length enriched poplar... 48 0.003
gb|BI071413.1|BI071413 C057P32U Populus strain T89 leaves P... 46 0.010
gb|BU836690.1|BU836690 T089G02 Populus apical shoot cDNA li... 46 0.010
gb|CF233490.1|CF233490 PtaJXO0024C12C1206 Poplar cDNA libra... 46 0.010
gb|CK102947.1|CK102947 G097P01.5pR Populus tension wood cDN... 46 0.010
gb|CV275712.1|CV275712 WS0177.B21_F22 PTxD-NR-A-8 Populus t... 46 0.010
gb|BI128887.1|BI128887 G083P04Y Populus cambium cDNA librar... 44 0.039
gb|BI131891.1|BI131891 G127P18Y Populus cambium cDNA librar... 44 0.039
gb|BI132326.1|BI132326 G135P19Y Populus cambium cDNA librar... 44 0.039
gb|CA925680.1|CA925680 MTU7TL.P4.E11 Aspen leaf cDNA Librar... 44 0.039
gb|CF227669.1|CF227669 PtaXM0003A12A1202 Poplar cDNA librar... 44 0.039
gb|CF229187.1|CF229187 PtaXM0022D10D1008 Poplar cDNA librar... 44 0.039
gb|CF232848.1|CF232848 PtaJXO0016E6E0610 Poplar cDNA librar... 44 0.039
gb|CF235000.1|CF235000 PtaJXT0017F7F0711 Poplar cDNA librar... 44 0.039
gb|CK092990.1|CK092990 G103P13.3pR Populus tension wood cDN... 44 0.039
gb|CK319325.1|CK319325 X9P09e02 Populus stem seasonal libra... 44 0.039
gb|DN493622.1|DN493622 G071P10.5pR Populus tension wood cDN... 44 0.039
gb|BU897334.1|BU897334 X055D05 Populus wood cDNA library Po... 42 0.16
gb|CF228734.1|CF228734 PtaXM0016G4G0414 Poplar cDNA library... 42 0.16
gb|CF235639.1|CF235639 PtaJXT0025C12C1206 Poplar cDNA libra... 42 0.16
gb|CF237143.1|CF237143 Ptajxtjxt2F11F1111 Poplar cDNA libra... 42 0.16
gb|CK088138.1|CK088138 A040P09.3pR Hybrid aspen plasmid lib... 42 0.16
gb|CK117417.1|CK117417 B050P68 Hybrid aspen plasmid library... 42 0.16
gb|AJ768016.1|AJ768016 AJ768016 Populus euphratica leaf adu... 42 0.16
gb|CV228438.1|CV228438 WS01910.B21_B15 PT-DX-N-A-10 Populus... 42 0.16
gb|CV240185.1|CV240185 WS0234.B21_K17 PT-MB-A-13 Populus tr... 42 0.16
gb|AY162184.1| Populus tremuloides cellulose synthase-like ... 42 0.16
>gb|AY055724.2| Populus tremuloides cellulose synthase (CesA5) mRNA, complete cds
Length = 3532
Score = 452 bits (228), Expect = e-125
Identities = 614/743 (82%)
Strand = Plus / Minus
Query: 1588 acacagccagttccgacataaactggtccttggatgccatcaagacctctcaagttaata 1647
||||| ||||| || ||||| || |||||||| || ||||| ||||| |||||||| |||
Sbjct: 2127 acacatccagtacccacatagacaggtccttgaataccatccagacccctcaagtttata 2068
Query: 1648 ccgaaaaacacggtgttcctgttggcatatcgatcattcctgtcaatgccatcgaatctc 1707
| || || || || || | |||||||||||||||||||||||||||||||| |||||
Sbjct: 2067 tcaaagaatacagtattgcgattggcatatcgatcattcctgtcaatgccatcaaatctt 2008
Query: 1708 tggggaaactgaacgtagcagacactccttcctaggttagggtccataaggaagcacata 1767
|| ||||||||||| ||||||||| | || |||||||| ||| | | ||| ||||||
Sbjct: 2007 tgtggaaactgaacatagcagacatgtttcccaaggttaggatccttcatgaaacacata 1948
Query: 1768 gcttccctgagagccttactgttgttaatgtagtgatcacaatcaagattcaacatgtat 1827
||||| || | |||||| || |||| |||||||||||||||||||||||||||| | |
Sbjct: 1947 gcttctctcaaagccttgctaatgtttatgtagtgatcacaatcaagattcaacaagaaa 1888
Query: 1828 tgtccattggtaagcacagctgagacacgaacaagagcattcatggcaccagctttcttg 1887
| ||||| || ||||| ||||| ||||||||||| | ||||||||||||||||||||||
Sbjct: 1887 ggcccattagttagcacggctgatacacgaacaagtgaattcatggcaccagctttcttg 1828
Query: 1888 tgatgctggaatccaggacgcttttcacgagaaacatagaccaaacggggtagctcattg 1947
|| |||||||| |||||||||||||||||||||||||| || || || || ||||||||
Sbjct: 1827 tggtgctggaagccaggacgcttttcacgagaaacataaactaaccgcggaagctcatta 1768
Query: 1948 ccctcagtatcaaggccaccactgtgaccaaggaaaacctgaatcattccaggatggtcc 2007
|| |||| |||||| || ||||| || || | |||||||||||||||||| ||||||||
Sbjct: 1767 ccatcagaatcaagccctccactttggcccaagaaaacctgaatcattcctggatggtct 1708
Query: 2008 cnggtattgtttcctggccatggtgtgccatcttgcatgatccatccttcctcaggaact 2067
| ||| || ||||| |||||||| || ||||||||||| ||||||||||| ||||| ||
Sbjct: 1707 ctggtgttatttccaggccatggggtcccatcttgcataatccatccttcttcaggcacc 1648
Query: 2068 ttctgtgccttagcaacaaggccatttaccctaactttgaattcttcatattctctcttc 2127
|| || ||||| |||||||| ||||| | | || ||| |||||||||||||||||||||
Sbjct: 1647 ttttgcgccttggcaacaagcccattgatacgaattttaaattcttcatattctctcttc 1588
Query: 2128 atggcccggcggtctttaacaaatgaagggtgcactttgtccttcaagtaatcaattttc 2187
|| || | |||||||| ||||| || || |||||||| ||||||||||| ||||| ||
Sbjct: 1587 atagctctacggtctttgacaaaagatggctgcactttatccttcaagtagtcaatcttt 1528
Query: 2188 tgggagaagtaccattcaggagctctaggttcaatgttgtacttcttaacaaatggtacc 2247
|| | ||||||||||| ||||| | ||| |||||| |||||||||| || || |||
Sbjct: 1527 tgtgcaaagtaccattctggagcccgaggctcaatgctgtacttcttgcagaagggcacc 1468
Query: 2248 cattttctagcaaactctgaagtctcagctagtgcatcaaatgtcagcatcgcagctcca 2307
||||| || | ||||||||||||||||| | || |||||||||| ||| ||||| |||
Sbjct: 1467 catttcctggaaaactctgaagtctcagacaaagcttcaaatgtcaacattgcagcacca 1408
Query: 2308 tcatcagatacatagcaagagac 2330
|||||||| |||||||| |||||
Sbjct: 1407 tcatcagagacatagcatgagac 1385
Score = 287 bits (145), Expect = 2e-075
Identities = 328/389 (84%)
Strand = Plus / Minus
Query: 1027 agagcccaccggagcacctggttcagacggtccgaaagattgatgggggcagaccccttg 1086
|||||||| || ||||| ||||||||||| || |||||||| || || |||||||| ||
Sbjct: 2700 agagcccatcgaagcacttggttcagacgatcagaaagattaataggagcagacccttta 2641
Query: 1087 aaagctggccgcttgggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaat 1146
|| ||||| ||||||||||| || || || |||||||| || || || |||||||| ||
Sbjct: 2640 aaggctgggcgcttgggcatacaataaattgaccgccaaccccgggcatgcatcttaaac 2581
Query: 1147 ccggtgagaatgtcttctgtcacagaaccgtagatccacccgatctcagttccccattca 1206
|| || ||||| |||||||| |||||||| |||||||| || ||||||| |||||| ||
Sbjct: 2580 ccagtaagaatatcttctgtaacagaaccatagatccatccaatctcagatccccaatct 2521
Query: 1207 gtcttgtcctcatagccacagcttataacatggatagcttctttcagaagagactccgga 1266
|| ||||||||||| ||||| || || ||||| ||||||||||| ||||||| || ||
Sbjct: 2520 gttttgtcctcatacccacaactaatgacatgaatagcttctttaagaagagtttctggt 2461
Query: 1267 gttgcggactgaggaacaccaccatactccatcagagtggaggcaacaaacgctgcggac 1326
||||| ||||||||||||||||||| |||||| || ||||| |||||||| | || |||
Sbjct: 2460 gttgcagactgaggaacaccaccattctccataagtgtggaagcaacaaaaacagctgac 2401
Query: 1327 tggccaaatctcttctccaggctcatttgagacataagaagtgatttctcgtcgtcaaat 1386
|||||||| |||||||||||||||||||||||||| |||||||| ||||| || ||||||
Sbjct: 2400 tggccaaacctcttctccaggctcatttgagacatgagaagtgacttctcatcatcaaat 2341
Query: 1387 ccagcgccttcaactccctcctctatatc 1415
||||| |||||||| || || ||||||||
Sbjct: 2340 ccagctccttcaacgccttcttctatatc 2312
Score = 113 bits (57), Expect = 5e-023
Identities = 276/349 (79%)
Strand = Plus / Minus
Query: 427 tggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactggtac 486
|||||||| |||||||| |||||||| |||||||| ||||| || ||||| ||||| ||
Sbjct: 3300 tggacgatcacccagaaagcgaagaaaagcttgccaaagagtggaccccatgactgataa 3241
Query: 487 ccgctgttgatggcgtaggagatgccggcgacgacgccgaccaggttgatgatcaggatg 546
|| |||||||| || | ||| || ||||| || || || |||| ||| | ||| ||||
Sbjct: 3240 ccactgttgattgcatgggatatcccggcaacaacacccaccaagttaacgatgaggaga 3181
Query: 547 gtggtgggcgggatcaggagcgtcgtccacttgaacatgtacagctccgcgaagtcgccg 606
|| || |||||||| || || || ||||| ||||||| ||| || || || | || |||
Sbjct: 3180 gttgttggcgggataagtagagttgtccatttgaacaagtatagttcagcagaatcaccg 3121
Query: 607 tcctcgtccgaggccttggaggtgacggtgaagttggtgtcgatgccggccagcaccttg 666
|||||||| || |||||||| || || |||||||||||||| ||||| || || || |||
Sbjct: 3120 tcctcgtctgatgccttggacgtaacagtgaagttggtgtcaatgccagcaagtactttg 3061
Query: 667 agcaggccctggaacacggcgaagaggtgcgcggagatgcccccgatcacccagaactgc 726
|||| ||| ||||| || || || || || || || | || ||||| ||||| |||||
Sbjct: 3060 agcaagccttggaaaacagcaaaaagatgggctgaaacaccaccgatgacccaaaactgt 3001
Query: 727 tcgttcctccaccactcgtcgatgcccaccccgctccacctcatctcca 775
|| |||||||||||||| || || || || || ||||||||||||||||
Sbjct: 3000 tcattcctccaccactcatcaatcccaacaccactccacctcatctcca 2952
Score = 61.9 bits (31), Expect = 2e-007
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 2841 cttgtcctgcttcattttccagccatcaaccctctctttccaggcaacatt 2891
||||||||||||||| |||||||||||||| || || |||||||| |||||
Sbjct: 883 cttgtcctgcttcatcttccagccatcaactctttccttccaggccacatt 833
Score = 54.0 bits (27), Expect = 4e-005
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 2593 gcattgcgcacaggatttgtgatacggtagtgcaagaagatgc 2635
||||| |||||||||||||| || |||||||||||||| ||||
Sbjct: 1122 gcattacgcacaggatttgttattcggtagtgcaagaaaatgc 1080
Score = 44.1 bits (22), Expect = 0.039
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 2514 ccacttagggaactgatccaatatcc 2539
|||||||||||||||||||| |||||
Sbjct: 1201 ccacttagggaactgatccagtatcc 1176
>gb|CA931952.1|CA931952 MTU4TA.P25.A10 Aspen apex cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 629
Score = 299 bits (151), Expect = 4e-079
Identities = 326/385 (84%)
Strand = Plus / Plus
Query: 1669 ttggcatatcgatcattcctgtcaatgccatcgaatctctggggaaactgaacgtagcag 1728
|||||||||||||||||| ||||||||||||| ||||| || ||||| ||||| ||||||
Sbjct: 245 ttggcatatcgatcattcttgtcaatgccatcaaatctttgtggaaattgaacatagcag 304
Query: 1729 acactccttcctaggttagggtccataaggaagcacatagcttccctgagagccttactg 1788
||| |||| || ||||| ||||| | ||| ||||||||||| || | |||||| ||
Sbjct: 305 acatgttttccaagattaggatccatcatgaaacacatagcttctctcaaagccttgcta 364
Query: 1789 ttgttaatgtagtgatcacaatcaagattcaacatgtattgtccattggtaagcacagct 1848
||||| | |||||||||||| ||||||||||||| | | | ||||| || |||||||||
Sbjct: 365 ttgtttacgtagtgatcacagtcaagattcaacaagaaaggcccattagttagcacagct 424
Query: 1849 gagacacgaacaagagcattcatggcaccagctttcttgtgatgctggaatccaggacgc 1908
|| ||||||||||| |||||||||||||||||||||||||| |||||||| || ||||||
Sbjct: 425 gatacacgaacaagtgcattcatggcaccagctttcttgtggtgctggaagcctggacgc 484
Query: 1909 ttttcacgagaaacatagaccaaacggggtagctcattgccctcagtatcaaggccacca 1968
||||||||||||||||| || || || || |||||||| || ||||||||||| || |||
Sbjct: 485 ttttcacgagaaacataaactaaccgtggcagctcattaccatcagtatcaagccctcca 544
Query: 1969 ctgtgaccaaggaaaacctgaatcattccaggatggtcccnggtattgtttcctggccat 2028
|| || || | |||||||||||||||||| |||||||| | ||| || ||| | ||||||
Sbjct: 545 ctttgccctaagaaaacctgaatcattcctggatggtctctggtgttatttncaggccat 604
Query: 2029 ggtgtgccatcttgcatgatccatc 2053
|| || ||||||||||| |||||||
Sbjct: 605 ggggtcccatcttgcataatccatc 629
>gb|BP924070.1|BP924070 BP924070 full-length enriched poplar cDNA library Populus nigra cDNA
clone PnFL1-027_K15.f 5', mRNA sequence
Length = 535
Score = 293 bits (148), Expect = 3e-077
Identities = 331/392 (84%)
Strand = Plus / Minus
Query: 1027 agagcccaccggagcacctggttcagacggtccgaaagattgatgggggcagaccccttg 1086
|||||||| || ||||| ||||||||||| || |||||||| || || |||||||| ||
Sbjct: 487 agagcccatcgaagcacttggttcagacgatcagaaagattaataggagcagacccttta 428
Query: 1087 aaagctggccgcttgggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaat 1146
|| ||||| || |||||||||||||| || |||||||| || || || ||||||||||||
Sbjct: 427 aaggctgggcgtttgggcatgcagtaaattgaccgccaaccacgggcatgcatcttgaat 368
Query: 1147 ccggtgagaatgtcttctgtcacagaaccgtagatccacccgatctcagttccccattca 1206
|| || ||||| |||||||| |||||||| |||||||| || ||||||| |||||| ||
Sbjct: 367 ccagtaagaatatcttctgtaacagaaccatagatccatcctatctcagatccccaatct 308
Query: 1207 gtcttgtcctcatagccacagcttataacatggatagcttctttcagaagagactccgga 1266
|| |||||||| || |||||||| || ||||| ||||| ||||| ||||||| || |||
Sbjct: 307 gttttgtcctcgtaaccacagctgatgacatgaatagcctctttaagaagagtttctgga 248
Query: 1267 gttgcggactgaggaacaccaccatactccatcagagtggaggcaacaaacgctgcggac 1326
||||| |||||||||||||| |||| |||||| || ||||| |||||||| | || |||
Sbjct: 247 gttgcagactgaggaacaccgccattctccatgagtgtggaagcaacaaaaacagctgac 188
Query: 1327 tggccaaatctcttctccaggctcatttgagacataagaagtgatttctcgtcgtcaaat 1386
|||||||| ||||||||||||||| | || ||||| |||||||| ||||| || ||||||
Sbjct: 187 tggccaaacctcttctccaggctcgtctgtgacatgagaagtgacttctcatcatcaaat 128
Query: 1387 ccagcgccttcaactccctcctctatatcttc 1418
||||| |||||||| ||||| |||||||||||
Sbjct: 127 ccagctccttcaacgccctcttctatatcttc 96
>gb|CN549808.1|CN549808 GQ0241.B3_H11 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0241_H11 5', mRNA sequence
Length = 840
Score = 280 bits (141), Expect = 4e-073
Identities = 327/389 (84%)
Strand = Plus / Minus
Query: 1027 agagcccaccggagcacctggttcagacggtccgaaagattgatgggggcagaccccttg 1086
|||||||| || ||||| ||||||||||| || |||||||| || || |||||||| ||
Sbjct: 659 agagcccatcgaagcacttggttcagacgatcagaaagattaataggagcagacccttta 600
Query: 1087 aaagctggccgcttgggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaat 1146
|| ||||| ||||||||||| || || || |||||||| || || || |||||||| ||
Sbjct: 599 aaggctgggcgcttgggcatacaataaattgaccgccaaccacgggcatgcatcttaaaa 540
Query: 1147 ccggtgagaatgtcttctgtcacagaaccgtagatccacccgatctcagttccccattca 1206
|| || ||||| |||||||| |||||||| |||||||| || ||||||| |||||| ||
Sbjct: 539 ccagtaagaatatcttctgtaacagaaccatagatccatccaatctcagatccccaatct 480
Query: 1207 gtcttgtcctcatagccacagcttataacatggatagcttctttcagaagagactccgga 1266
|| ||||||||||| ||||| || || ||||| ||||||||||| ||||||| || ||
Sbjct: 479 gttttgtcctcatacccacaactaatgacatgaatagcttctttaagaagagtttctggt 420
Query: 1267 gttgcggactgaggaacaccaccatactccatcagagtggaggcaacaaacgctgcggac 1326
||||| |||||||||||||| |||| |||||| || ||||| |||||||| | || |||
Sbjct: 419 gttgcagactgaggaacaccgccattctccataagtgtggaagcaacaaaaacagctgac 360
Query: 1327 tggccaaatctcttctccaggctcatttgagacataagaagtgatttctcgtcgtcaaat 1386
|||||||| |||||||||||||||||||||||||| |||||||| ||||| || ||||||
Sbjct: 359 tggccaaacctcttctccaggctcatttgagacatgagaagtgacttctcatcatcaaat 300
Query: 1387 ccagcgccttcaactccctcctctatatc 1415
||||| |||||||| || || ||||||||
Sbjct: 299 ccagctccttcaacgccttcttctatatc 271
>gb|CX169886.1|CX169886 G10_69-94_14.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 620
Score = 266 bits (134), Expect = 6e-069
Identities = 347/418 (83%)
Strand = Plus / Minus
Query: 1588 acacagccagttccgacataaactggtccttggatgccatcaagacctctcaagttaata 1647
||||| ||||| || ||||| || |||||||| || ||||| ||||| |||||||| |||
Sbjct: 433 acacatccagtacccacatagacaggtccttgaataccatccagacccctcaagtttata 374
Query: 1648 ccgaaaaacacggtgttcctgttggcatatcgatcattcctgtcaatgccatcgaatctc 1707
| || || || || || | |||||||||||||||||||||||||||||||| |||||
Sbjct: 373 tcaaagaatacagtattgcgattggcatatcgatcattcctgtcaatgccatcaaatctt 314
Query: 1708 tggggaaactgaacgtagcagacactccttcctaggttagggtccataaggaagcacata 1767
|| ||||||||||| ||||||||| | || |||||||| ||||| | ||| ||||||
Sbjct: 313 tgtggaaactgaacatagcagacatgtttcccaaggttaggatccatcatgaaacacata 254
Query: 1768 gcttccctgagagccttactgttgttaatgtagtgatcacaatcaagattcaacatgtat 1827
||||| || | |||||| || ||||| ||||| |||||||||||||||||||||| | |
Sbjct: 253 gcttctctcaaagccttgctattgtttatgtaatgatcacaatcaagattcaacaagaaa 194
Query: 1828 tgtccattggtaagcacagctgagacacgaacaagagcattcatggcaccagctttcttg 1887
| ||||| || || || ||||| ||||||||||| | |||||||||||| |||||||||
Sbjct: 193 ggcccattagttagaacggctgatacacgaacaagtgaattcatggcaccggctttcttg 134
Query: 1888 tgatgctggaatccaggacgcttttcacgagaaacatagaccaaacggggtagctcattg 1947
|| |||||||| || ||||||||||||||||||||||| || || || || ||||||||
Sbjct: 133 tggtgctggaagcccggacgcttttcacgagaaacataaactaaccgcggaagctcatta 74
Query: 1948 ccctcagtatcaaggccaccactgtgaccaaggaaaacctgaatcattccaggatggt 2005
|| |||| |||||| || ||||| || || | |||||||||||||||||| |||||||
Sbjct: 73 ccatcagaatcaagccctccactttggcccaagaaaacctgaatcattcctggatggt 16
>gb|CA932078.1|CA932078 MTU4TA.P26.F03 Aspen apex cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 596
Score = 260 bits (131), Expect = 4e-067
Identities = 348/419 (83%), Gaps = 1/419 (0%)
Strand = Plus / Plus
Query: 1588 acacagccagttccgacataaactggtccttggatgccatcaagacctctcaagttaata 1647
||||| ||||| || ||||| || |||||||| || ||||| | ||| | |||||| |||
Sbjct: 161 acacatccagtgcccacatagacaggtccttgaataccatccaaaccccccaagtttata 220
Query: 1648 ccgaaaaacacggtgttcctgttggcatatcgatcattcctgtcaatgccatcgaatctc 1707
| || ||||| || || | |||||||||||||||||| ||||||||||||| |||||
Sbjct: 221 tcaaagaacacagtattgcgattggcatatcgatcattcttgtcaatgccatcaaatctt 280
Query: 1708 tggggaaactgaacgtagcagacactccttcctaggttagggtccataaggaagcacata 1767
|| ||||| ||||| ||||||||| |||| || ||||| ||||| | ||| ||||||
Sbjct: 281 tgtggaaattgaacatagcagacatgttttccaagattaggatccatcatgaaacacata 340
Query: 1768 gcttccctgagagccttactgttgttaatgtagtgatcacaatcaagattcaacatgtat 1827
||||| || | |||||| || ||||| | |||||||||||| ||||||||||||| | |
Sbjct: 341 gcttctctcaaagccttgctattgtttacgtagtgatcacagtcaagattcaacaagaaa 400
Query: 1828 tgtccattggtaagcacagctgagacacgaacaagagcattcatggcaccagctttcttg 1887
| ||||| || ||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 401 ggcccattagttagcacagctgatacacgaacaagtgcattcatggcaccagctttcttg 460
Query: 1888 tgatgctggaatccaggacgcttttcacgagaaacatagaccaaacggggtagctcattg 1947
|| |||||||| || ||||||||||||||||||||||| || || || || ||||||||
Sbjct: 461 tggtgctggaagcctggacgcttttcacgagaaacataaactaaccgtggcagctcatta 520
Query: 1948 ccctcagtatcaaggccaccactgtgaccaaggaaaacctgaatcattccaggatggtc 2006
|| ||||||||||| || ||||| || || | | |||||||||||||||| ||||||||
Sbjct: 521 ccatcagtatcaagccctccactttgccctaag-aaacctgaatcattcctggatggtc 578
>gb|CA930801.1|CA930801 MTU2TA.P10.D08 Aspen apex cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 530
Score = 228 bits (115), Expect = 1e-057
Identities = 298/359 (83%)
Strand = Plus / Plus
Query: 1588 acacagccagttccgacataaactggtccttggatgccatcaagacctctcaagttaata 1647
||||| ||||| || ||||| || |||||||| || ||||| | ||| |||||||| |||
Sbjct: 164 acacatccagtgcccacatagacaggtccttgaataccatccaaacccctcaagtttata 223
Query: 1648 ccgaaaaacacggtgttcctgttggcatatcgatcattcctgtcaatgccatcgaatctc 1707
| || ||||| || || | |||||||||||||||||| ||||||||||||| |||||
Sbjct: 224 tcaaagaacacagtattgcgattggcatatcgatcattcttgtcaatgccatcaaatctt 283
Query: 1708 tggggaaactgaacgtagcagacactccttcctaggttagggtccataaggaagcacata 1767
|| ||||| ||||| ||||||||| |||| || ||||| ||||| | ||| ||||||
Sbjct: 284 tgtggaaattgaacatagcagacatgttttccaagattaggatccatcatgaaacacata 343
Query: 1768 gcttccctgagagccttactgttgttaatgtagtgatcacaatcaagattcaacatgtat 1827
||||| || | ||||| || ||||| | |||||||||||| ||||||||||||| | |
Sbjct: 344 gcttctctcaaagcctcgctattgtttacgtagtgatcacagtcaagattcaacaagaaa 403
Query: 1828 tgtccattggtaagcacagctgagacacgaacaagagcattcatggcaccagctttcttg 1887
| ||||| || ||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 404 ggcccattagttagcacagctgatacacgaacaagtgcattcatggcaccagctttcttg 463
Query: 1888 tgatgctggaatccaggacgcttttcacgagaaacatagaccaaacggggtagctcatt 1946
|| |||||||| || ||||||||||||||||||||||| || || || || ||||||||
Sbjct: 464 tggtgctggaagcctggacgcttttcacgagaaacataaactaaccgtggcagctcatt 522
>gb|DT473511.1|DT473511 WS01229.BR_N17 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01229_N17 5', mRNA sequence
Length = 912
Score = 206 bits (104), Expect = 5e-051
Identities = 374/464 (80%)
Strand = Plus / Minus
Query: 2245 acccattttctagcaaactctgaagtctcagctagtgcatcaaatgtcagcatcgcagct 2304
||||||||||||||||| || || || |||| || || |||||||||| ||| ||||||
Sbjct: 816 acccattttctagcaaattcagacgtttcagatatggcttcaaatgtcaacatagcagct 757
Query: 2305 ccatcatcagatacatagcaagagaccttatccacagggtaatccacagcaagaatggat 2364
|||||||| || |||||||||||||| || || || |||||||| || |||||||| |||
Sbjct: 756 ccatcatctgaaacatagcaagagactttgtcgactgggtaatctactgcaagaatagat 697
Query: 2365 agcacggtattggcagtgacaagaggaggctccttcattgggtcgactgtactgacgaaa 2424
||||| |||||||| ||||| || ||||| ||||| | ||||||||||||||||| |||
Sbjct: 696 agcacagtattggctgtgaccagtggaggttcctttaaagggtcgactgtactgacaaaa 637
Query: 2425 atgtcaacagcagccaactgagatggctcaccttcccggtcataccttaatgccagccta 2484
||||||||||||||||| ||||| ||||| ||||| ||||| || | | |||||
Sbjct: 636 atgtcaacagcagccaattgagacggctctccttctttctcatatctgagagatagcctg 577
Query: 2485 tcaaggtacgtctcccggttgattggaaaccacttagggaactgatccaatatccacgaa 2544
||||| || ||||| || || | ||||| ||| |||||||| |||||||||||||| ||
Sbjct: 576 tcaagatatgtctcacgattcactggaagccatttagggaattgatccaatatccatgat 517
Query: 2545 agagcaaaccagatctcacatataacagatagaagccataatgggtatgcattgcgcaca 2604
| |||||||| |||||||| |||||||||| | ||| || | || |||| | |||
Sbjct: 516 attgcaaaccatatctcacagataacagatattaaccacaaagcataagcatccctcact 457
Query: 2605 ggatttgtgatacggtagtgcaagaagatgcttagaacaatcaatcgcagcacaatgacc 2664
|||||||| | ||||||||| ||||| |||| || |||| | |||| || ||||||
Sbjct: 456 ggatttgttagacggtagtgtaagaaaatgcaaaggacaacaagccgcaaaactatgacc 397
Query: 2665 atcctgtatggatttatcctggaggaaggaagtggaactttcct 2708
|||||||| || || ||||| |||||||||| || ||| |||||
Sbjct: 396 atcctgtaagggttaatcctagaggaaggaattgaaaccttcct 353
>gb|AJ779945.1|AJ779945 AJ779945 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000800009G06F1, mRNA sequence
Length = 735
Score = 180 bits (91), Expect = 3e-043
Identities = 294/362 (81%)
Strand = Plus / Minus
Query: 1831 ccattggtaagcacagctgagacacgaacaagagcattcatggcaccagctttcttgtga 1890
|||||||| || |||||||| || |||| || |||||||| || || ||||||||||||
Sbjct: 524 ccattggtcagtacagctgaaactcgaatcagtgcattcattgctccggctttcttgtga 465
Query: 1891 tgctggaatccaggacgcttttcacgagaaacatagaccaaacggggtagctcattgccc 1950
|||||||||||||| | |||||||||||||||||| || | ||| ||||||||||| ||
Sbjct: 464 tgctggaatccaggtctcttttcacgagaaacatatacaagacgaggtagctcatttcca 405
Query: 1951 tcagtatcaaggccaccactgtgaccaaggaaaacctgaatcattccaggatggtcccng 2010
|| ||||| || || ||||||||||| | ||| ||||| |||||||| || || |||| |
Sbjct: 404 tctgtatcgagccccccactgtgacctaagaacacctggatcattcctgggtgatccctg 345
Query: 2011 gtattgtttcctggccatggtgtgccatcttgcatgatccatccttcctcaggaactttc 2070
| ||| ||||| ||||| || || ||||| ||||| |||| ||||| || || | |||
Sbjct: 344 ggattatttccaggccacggagttccatcctgcattgtccaaccttcttctggcatcttc 285
Query: 2071 tgtgccttagcaacaaggccatttaccctaactttgaattcttcatattctctcttcatg 2130
|| || || |||||||| |||| | || || ||||||||||||||||||||||||||
Sbjct: 284 tgagctttggcaacaagagcattgatccgcaccttgaattcttcatattctctcttcatt 225
Query: 2131 gcccggcggtctttaacaaatgaagggtgcactttgtccttcaagtaatcaattttctgg 2190
|| ||||| ||||| ||||| ||||| || | |||||||||| |||||||| || |||
Sbjct: 224 gctcggcgctctttcacaaaagaaggctgtatcttgtccttcagataatcaatcttttgg 165
Query: 2191 ga 2192
||
Sbjct: 164 ga 163
>gb|CN524693.1|CN524693 GQ015M08.T3_H02 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M08_H02 5', mRNA sequence
Length = 770
Score = 178 bits (90), Expect = 1e-042
Identities = 327/406 (80%)
Strand = Plus / Minus
Query: 1030 gcccaccggagcacctggttcagacggtccgaaagattgatgggggcagaccccttgaaa 1089
|||||||| ||||| || || ||||| || |||||||| ||||| ||||| ||||| ||
Sbjct: 543 gcccaccgaagcacttgatttagacgatcagaaagattaatgggagcagatcccttaaag 484
Query: 1090 gctggccgcttgggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccg 1149
|| || ||||| |||||||| ||||| || | ||| || || || ||||||||||||||
Sbjct: 483 gcaggacgctttggcatgcaatagattgatctccacccacgagcatgcatcttgaatcct 424
Query: 1150 gtgagaatgtcttctgtcacagaaccgtagatccacccgatctcagttccccattcagtc 1209
|| || || ||||| || |||||||| || ||||| || || ||| ||||||| || | |
Sbjct: 423 gtaaggatatcttccgtaacagaaccatatatccatcctatttcacttccccagtctgac 364
Query: 1210 ttgtcctcatagccacagcttataacatggatagcttctttcagaagagactccggagtt 1269
||||| || || |||||||| || ||||| ||||||||||| ||||||||||| || ||
Sbjct: 363 ttgtcttcgtatccacagctgatgacatgaatagcttctttgagaagagactctggggtg 304
Query: 1270 gcggactgaggaacaccaccatactccatcagagtggaggcaacaaacgctgcggactgg 1329
||||||| ||||||||||| | |||||| || ||||| ||||||||| | | || |||
Sbjct: 303 gcggactctggaacaccaccgttctccataagggtggaagcaacaaacacagttgattgg 244
Query: 1330 ccaaatctcttctccaggctcatttgagacataagaagtgatttctcgtcgtcaaatcca 1389
|||||||| ||||| || ||||||||||||| || | |||||| || || || ||||||
Sbjct: 243 ccaaatcttttctcaagtgtcatttgagacatgagcaatgatttttcatcatcgaatcca 184
Query: 1390 gcgccttcaactccctcctctatatcttcaaggttgaatactggca 1435
| |||||||| || || ||||||||||| | |||||||| ||||
Sbjct: 183 gtaccttcaaccccttcttctatatcttctaaattgaataccggca 138
>gb|AJ779545.1|AJ779545 AJ779545 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000800003H02F1, mRNA sequence
Length = 713
Score = 172 bits (87), Expect = 6e-041
Identities = 293/362 (80%)
Strand = Plus / Minus
Query: 1831 ccattggtaagcacagctgagacacgaacaagagcattcatggcaccagctttcttgtga 1890
|||||||| || |||||||| || |||| || |||||||| || || ||||||||||||
Sbjct: 501 ccattggtcagtacagctgaaactcgaatcagtgcattcattgctccggctttcttgtga 442
Query: 1891 tgctggaatccaggacgcttttcacgagaaacatagaccaaacggggtagctcattgccc 1950
|||||||||||||| | |||||||||||||||||| || | ||| ||||||||||| ||
Sbjct: 441 tgctggaatccaggtctcttttcacgagaaacatatacaagacgaggtagctcatttcca 382
Query: 1951 tcagtatcaaggccaccactgtgaccaaggaaaacctgaatcattccaggatggtcccng 2010
|| ||||| || || ||||||||||| | ||| ||||| |||||||| || || |||| |
Sbjct: 381 tctgtatcgagccccccactgtgacctaagaacacctggatcattcctgggtgatccctg 322
Query: 2011 gtattgtttcctggccatggtgtgccatcttgcatgatccatccttcctcaggaactttc 2070
| ||| ||||| ||||| || || || || ||||| |||| ||||| || || | |||
Sbjct: 321 ggattatttccaggccacggagttccgtcctgcattgtccaaccttcttctggcatcttc 262
Query: 2071 tgtgccttagcaacaaggccatttaccctaactttgaattcttcatattctctcttcatg 2130
|| || || |||||||| |||| | || || ||||||||||||||||||||||||||
Sbjct: 261 tgagctttggcaacaagagcattgatccgcaccttgaattcttcatattctctcttcatt 202
Query: 2131 gcccggcggtctttaacaaatgaagggtgcactttgtccttcaagtaatcaattttctgg 2190
|| ||||| ||||| ||||| ||||| || | |||||||||| |||||||| || |||
Sbjct: 201 gctcggcgctctttcacaaaagaaggctgtatcttgtccttcagataatcaatcttttgg 142
Query: 2191 ga 2192
||
Sbjct: 141 ga 140
>gb|AY162181.1| Populus tremuloides cellulose synthase (CesA4) mRNA, complete cds
Length = 3640
Score = 172 bits (87), Expect = 6e-041
Identities = 266/326 (81%)
Strand = Plus / Minus
Query: 1831 ccattggtaagcacagctgagacacgaacaagagcattcatggcaccagctttcttgtga 1890
|||||||| || |||||||| || |||| || |||||||| || || ||||||||||||
Sbjct: 1703 ccattggtcagtacagctgaaactcgaatcagtgcattcattgctccggctttcttgtga 1644
Query: 1891 tgctggaatccaggacgcttttcacgagaaacatagaccaaacggggtagctcattgccc 1950
|||||||||||||| | |||||||||||||||||| || | ||| ||||||||||| ||
Sbjct: 1643 tgctggaatccaggtctcttttcacgagaaacatatacaagacgaggtagctcatttcca 1584
Query: 1951 tcagtatcaaggccaccactgtgaccaaggaaaacctgaatcattccaggatggtcccng 2010
|| ||||| || || ||||||||||| | ||| |||||||||||||| || || |||| |
Sbjct: 1583 tccgtatcgagccccccactgtgacctaagaacacctgaatcattcctgggtgatccctg 1524
Query: 2011 gtattgtttcctggccatggtgtgccatcttgcatgatccatccttcctcaggaactttc 2070
| ||| ||||| |||||||| || ||||| ||||| |||| ||||| || || | ||
Sbjct: 1523 ggattatttccaggccatggagttccatcctgcattgtccaaccttcttctggcatcttt 1464
Query: 2071 tgtgccttagcaacaaggccatttaccctaactttgaattcttcatattctctcttcatg 2130
|| || || |||||||| |||| | || || |||||||||||||||||||| |||||
Sbjct: 1463 tgagctttggcaacaagagcattgatccgcaccttgaattcttcatattctcttttcatt 1404
Query: 2131 gcccggcggtctttaacaaatgaagg 2156
|| ||||| ||||| ||||| |||||
Sbjct: 1403 gctcggcgctctttcacaaaagaagg 1378
Score = 105 bits (53), Expect = 1e-020
Identities = 176/217 (81%)
Strand = Plus / Minus
Query: 1042 acctggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgcttg 1101
|||||||||| ||| || |||||||| || || ||||||||||| || ||||| ||
Sbjct: 2495 acctggttcaaacgatcagaaagattaataggagcagaccccttaaatgctgggcgagga 2436
Query: 1102 ggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtct 1161
|||||||| ||||| || ||| || || || |||||||| || || || | ||| |||
Sbjct: 2435 ggcatgcaatagattgatatccaaccacgagcatgcatcttaaacccagtcaaaatatct 2376
Query: 1162 tctgtcacagaaccgtagatccacccgatctcagttccccattcagtcttgtcctcatag 1221
||||| ||||| || |||||||| || ||||| | |||||||||||||||| |||||
Sbjct: 2375 tctgtaacagacccatagatccatccaatctctttggcccattcagtcttgtcttcatat 2316
Query: 1222 ccacagcttataacatggatagcttctttcagaagag 1258
|||||||| |||||||||||||||||||||| |||||
Sbjct: 2315 ccacagctaataacatggatagcttctttcaaaagag 2279
Score = 101 bits (51), Expect = 2e-019
Identities = 231/291 (79%)
Strand = Plus / Minus
Query: 2284 tcaaatgtcagcatcgcagctccatcatcagatacatagcaagagaccttatccacaggg 2343
|||||||||| ||| || | |||||||| || |||||||| || || || || ||||||
Sbjct: 1250 tcaaatgtcaacatagctgaaccatcatctgaaacatagcatgatactttgtcgacaggg 1191
Query: 2344 taatccacagcaagaatggatagcacggtattggcagtgacaagaggaggctccttcatt 2403
||||| |||||||||||||| | ||| || || || || |||| |||||| || |||||
Sbjct: 1190 taatcaacagcaagaatggacaacacagtgtttgctgttacaataggaggttctttcatg 1131
Query: 2404 gggtcgactgtactgacgaaaatgtcaacagcagccaactgagatggctcaccttcccgg 2463
|| || |||||||| || || ||||||| || ||| ||||| ||||| || || || ||
Sbjct: 1130 ggatccactgtactaacaaagatgtcaataggagctaactgtgatggttctccatcacga 1071
Query: 2464 tcataccttaatgccagcctatcaaggtacgtctcccggttgattggaaaccacttaggg 2523
||||| |||||||| ||||| || ||||| ||||| || ||||| || | ||| || ||
Sbjct: 1070 tcatatcttaatgctagcctgtcgaggtaagtctcgcgattgataggcatccattttgga 1011
Query: 2524 aactgatccaatatccacgaaagagcaaaccagatctcacatataacagat 2574
|||||||||| | ||| || | |||||||| |||||||| |||||||||
Sbjct: 1010 aactgatccagaagccaggacaaggcaaaccaaatctcacagataacagat 960
Score = 79.8 bits (40), Expect = 7e-013
Identities = 163/204 (79%)
Strand = Plus / Minus
Query: 303 ggtgaaggggtcgatgcgaacccacagcaaggagaagatggacgccagcaggatggccca 362
|||||||||||||||||| ||||| ||||||||||| ||||| || || || || | |||
Sbjct: 3234 ggtgaaggggtcgatgcgcacccatagcaaggagaaaatggaggcaaggagaatagacca 3175
Query: 363 gacgacgacgatggtcggggtgcggttctgcctgcccatgaggcccttgaggaacgggta 422
||||| ||| || || || || || || |||| |||| | ||||||||||| || ||
Sbjct: 3174 gacgatgacaattgttggcgtacgattttgccgacccagcaaacccttgaggaaaggata 3115
Query: 423 caggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactg 482
|| ||| | |||||||| | || |||||||||||||| ||||| || ||||| |||||
Sbjct: 3114 caaatgggcaatgacccaaatagcaaagaagagcttgccaaagagaggaccccatgactg 3055
Query: 483 gtacccgctgttgatggcgtagga 506
||| || ||||| ||||| |||||
Sbjct: 3054 gtatccactgtttatggcatagga 3031
>gb|BU823358.1|BU823358 UB51DPD11 Populus tremula cambium cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 609
Score = 170 bits (86), Expect = 3e-040
Identities = 286/353 (81%)
Strand = Plus / Minus
Query: 1831 ccattggtaagcacagctgagacacgaacaagagcattcatggcaccagctttcttgtga 1890
|||||||| || |||||||| || |||| || |||||||| || || ||||||||||||
Sbjct: 516 ccattggtcagtacagctgaaactcgaatcagtgcattcattgctccggctttcttgtga 457
Query: 1891 tgctggaatccaggacgcttttcacgagaaacatagaccaaacggggtagctcattgccc 1950
|||||||||||||| | |||||||||||| ||||| || | ||| ||||||||||| ||
Sbjct: 456 tgctggaatccaggcctcttttcacgagatacatatacaagacgaggtagctcatttcca 397
Query: 1951 tcagtatcaaggccaccactgtgaccaaggaaaacctgaatcattccaggatggtcccng 2010
|| ||||| || || || |||||||| | ||| ||||| |||||||| || || |||| |
Sbjct: 396 tccgtatcgagccccccgctgtgacctaagaacacctggatcattcctgggtgatccctg 337
Query: 2011 gtattgtttcctggccatggtgtgccatcttgcatgatccatccttcctcaggaactttc 2070
| ||| ||||| |||||||| || ||||| ||||| |||| ||||| || || | |||
Sbjct: 336 ggattatttccaggccatggagttccatcctgcattgtccaaccttcttctggcatcttc 277
Query: 2071 tgtgccttagcaacaaggccatttaccctaactttgaattcttcatattctctcttcatg 2130
|| || || |||||||| |||| | || || ||||||||||||||||||||||||||
Sbjct: 276 tgagctttggcaacaagagcattgatccgcaccttgaattcttcatattctctcttcatt 217
Query: 2131 gcccggcggtctttaacaaatgaagggtgcactttgtccttcaagtaatcaat 2183
|| ||||| ||||| ||||| ||||| || | |||||||||| ||||||||
Sbjct: 216 gctcggcgctctttcacaaaagaaggctgtatcttgtccttcagataatcaat 164
>gb|CF234438.1|CF234438 Ptajxojxo2F10F1012 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 772
Score = 157 bits (79), Expect = 4e-036
Identities = 295/367 (80%)
Strand = Plus / Minus
Query: 409 ttgaggaacgggtacaggtggacgatgacccagaaggcgaagaagagcttgccgaagagc 468
|||||||| ||||| || |||||||| ||||||||||| ||||| |||||||| |||||
Sbjct: 441 ttgaggaaagggtagagatggacgatcacccagaaggcaaagaaaagcttgccaaagagt 382
Query: 469 gggccccacgactggtacccgctgttgatggcgtaggagatgccggcgacgacgccgacc 528
|||||||||||||| || || ||||||||||||| ||| || ||||| || || || |||
Sbjct: 381 gggccccacgactgataaccactgttgatggcgtgggatatcccggcaacaacacctacc 322
Query: 529 aggttgatgatcaggatggtggtgggcgggatcaggagcgtcgtccacttgaacatgtac 588
| ||| | ||| |||| || || || ||||| || || || ||||| || |||||||||
Sbjct: 321 aagttaacgatgaggagagttgttggtgggataagcagagttgtccatttaaacatgtac 262
Query: 589 agctccgcgaagtcgccgtcctcgtccgaggccttggaggtgacggtgaagttggtgtcg 648
|| |||| ||| || ||||||||||| || | |||||| ||||| |||||| |||||||
Sbjct: 261 agttccgtgaaatcaccgtcctcgtctgatgacttggacgtgacagtgaagctggtgtca 202
Query: 649 atgccggccagcaccttgagcaggccctggaacacggcgaagaggtgcgcggagatgccc 708
||||| || || || ||||||| ||| ||||| || || || || || || || | ||
Sbjct: 201 atgccagcgagtactttgagcaagccttggaaaacagcaaaaagatgggctgaaacacca 142
Query: 709 ccgatcacccagaactgctcgttcctccaccactcgtcgatgcccaccccgctccacctc 768
|| || ||||| ||||| |||||||||||||| || || || || || || |||||||||
Sbjct: 141 ccaataacccaaaactgttcgttcctccaccattcatcaatcccaacaccactccacctc 82
Query: 769 atctcca 775
|||||||
Sbjct: 81 atctcca 75
>gb|CA927446.1|CA927446 MTU6CR.P9.B04 Aspen root cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 648
Score = 153 bits (77), Expect = 6e-035
Identities = 230/281 (81%)
Strand = Plus / Plus
Query: 1027 agagcccaccggagcacctggttcagacggtccgaaagattgatgggggcagaccccttg 1086
|||||||| || ||||| ||||||||||| || |||||||| || || |||||||| ||
Sbjct: 365 agagcccatcgaagcacttggttcagacgatcagaaagattaataggagcagacccttta 424
Query: 1087 aaagctggccgcttgggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaat 1146
|| || || ||||||||||| || || || |||||||| || || || |||||||| ||
Sbjct: 425 aaggccgggcgcttgggcatacaataaattgaccgccaaccacgggcatgcatcttaaaa 484
Query: 1147 ccggtgagaatgtcttctgtcacagaaccgtagatccacccgatctcagttccccattca 1206
|| || ||||| |||||||| |||||||| |||||||| || ||||||| |||||| ||
Sbjct: 485 ccagtaagaatatcttctgtaacagaaccatagatccatccaatctcagatccccaatct 544
Query: 1207 gtcttgtcctcatagccacagcttataacatggatagcttctttcagaagagactccgga 1266
|| |||| |||||| ||||| || || ||||| ||||||||||| |||||| || ||
Sbjct: 545 gttttgttctcatacccacaactaatgacatgaatagcttctttaagaagaagttctggt 604
Query: 1267 gttgcggactgaggaacaccaccatactccatcagagtgga 1307
||||| |||||||||||||| |||| |||||| || |||||
Sbjct: 605 gttgcagactgaggaacaccgccattctccataagtgtgga 645
Score = 54.0 bits (27), Expect = 4e-005
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 709 ccgatcacccagaactgctcgttcctccaccactcgtcgatgcccaccccgctccacctc 768
||||| ||||| ||||| || |||||||||||||| || || || || || |||||||||
Sbjct: 47 ccgatgacccaaaactgttcattcctccaccactcatcaatcccaacaccactccacctc 106
Query: 769 atctcca 775
|||||||
Sbjct: 107 atctcca 113
>gb|AJ778214.1|AJ778214 AJ778214 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400040H10F1, mRNA sequence
Length = 612
Score = 149 bits (75), Expect = 9e-034
Identities = 348/438 (79%), Gaps = 1/438 (0%)
Strand = Plus / Minus
Query: 1746 agggtccataaggaagcacatagcttccctgagagccttactgttgttaatgtagtgatc 1805
||||||||| | ||| ||||| ||||| ||||||| |||||||| || | |||||||||
Sbjct: 606 agggtccatcatgaaacacatggcttct-tgagagctttactgttattgaagtagtgatc 548
Query: 1806 acaatcaagattcaacatgtattgtccattggtaagcacagctgagacacgaacaagagc 1865
|||||| | ||||| | || |||||||| || |||||||| || |||| | ||
Sbjct: 547 acaatcgacattcagaagataagcaccattggtcagtacagctgaaactcgaatcaacgc 488
Query: 1866 attcatggcaccagctttcttgtgatgctggaatccaggacgcttttcacgagaaacata 1925
|||||| || || |||||||||||||||||||||||||| | ||||||||| ||||||||
Sbjct: 487 attcattgctccggctttcttgtgatgctggaatccaggtctcttttcacgggaaacata 428
Query: 1926 gaccaaacggggtagctcattgccctcagtatcaaggccaccactgtgaccaaggaaaac 1985
|| | || ||||||||||| || || || ||||| || ||||||||||| | || ||
Sbjct: 427 tacaagtcgaggtagctcatttccatccgtgtcaagccccccactgtgacccaaaaacac 368
Query: 1986 ctgaatcattccaggatggtcccnggtattgtttcctggccatggtgtgccatcttgcat 2045
||| |||||||| || || |||| | ||| ||||| |||||||| || ||||| |||||
Sbjct: 367 ctggatcattcctgggtgatcccttggattatttccaggccatggagttccatcctgcat 308
Query: 2046 gatccatccttcctcaggaactttctgtgccttagcaacaaggccatttaccctaacttt 2105
|||| ||||| ||||| | ||||| || || |||||||| |||| | | || ||
Sbjct: 307 cgtccaaccttcttcaggcatcttctgagctttggcaacaagagcattgattcgcacctt 248
Query: 2106 gaattcttcatattctctcttcatggcccggcggtctttaacaaatgaagggtgcacttt 2165
|||||||||||||||||||||||| || ||||| ||||| ||||| ||||| || | ||
Sbjct: 247 gaattcttcatattctctcttcattgctcggcgctctttgacaaaagaaggctgtatctt 188
Query: 2166 gtccttcaagtaatcaat 2183
|||||||| ||||||||
Sbjct: 187 gtccttcagataatcaat 170
>gb|AY330165.1| Populus tremuloides CesA5A-like mRNA, partial cds
Length = 566
Score = 147 bits (74), Expect = 4e-033
Identities = 215/262 (82%)
Strand = Plus / Minus
Query: 1174 ccgtagatccacccgatctcagttccccattcagtcttgtcctcatagccacagcttata 1233
||||| |||||||| || ||| ||||||| || |||||||| || || |||||||| ||
Sbjct: 563 ccgtaaatccaccctatttcacttccccagtctgtcttgtcttcgtatccacagctgatg 504
Query: 1234 acatggatagcttctttcagaagagactccggagttgcggactgaggaacaccaccatac 1293
||||| ||||||||||| ||||||||||| || || || |||| ||||||||| |||| |
Sbjct: 503 acatgaatagcttctttgagaagagactctggggtggcagactcaggaacaccgccattc 444
Query: 1294 tccatcagagtggaggcaacaaacgctgcggactggccaaatctcttctccaggctcatt 1353
||||| |||||||| ||||||||| | | || ||||||||||| ||||| || |||||
Sbjct: 443 tccataagagtggaagcaacaaacacagttgattggccaaatcttttctcaagtgtcatt 384
Query: 1354 tgagacataagaagtgatttctcgtcgtcaaatccagcgccttcaactccctcctctata 1413
|||||||| || | |||||| || || || ||||||| |||||||| || || ||||||
Sbjct: 383 tgagacatgagcaatgatttttcatcatcgaatccagtaccttcaaccccttcttctata 324
Query: 1414 tcttcaaggttgaatactggca 1435
||||| | |||||||| ||||
Sbjct: 323 tcttctaaattgaataccggca 302
Score = 60.0 bits (30), Expect = 7e-007
Identities = 117/146 (80%)
Strand = Plus / Minus
Query: 1582 ttgaaaacacagccagttccgacataaactggtccttggatgccatcaagacctctcaag 1641
||||||||||| || || || ||||| || || |||||||| ||||| | ||||| ||
Sbjct: 146 ttgaaaacacaccctgtacccacatatacagggccttggattccatccaatcctcttaaa 87
Query: 1642 ttaataccgaaaaacacggtgttcctgttggcatatcgatcattcctgtcaatgccatcg 1701
|| ||| | || || || ||||| | ||||||||||||||| || || ||||| |||||
Sbjct: 86 tttatatcaaagaaaacagtgttacggttggcatatcgatcgtttctatcaatcccatca 27
Query: 1702 aatctctggggaaactgaacgtagca 1727
|||||||| || |||||||| |||||
Sbjct: 26 aatctctgagggaactgaacatagca 1
>gb|AY196961.1| Populus tremuloides cellulose synthase 6 (CesA6) mRNA, complete cds
Length = 3773
Score = 139 bits (70), Expect = 9e-031
Identities = 331/418 (79%)
Strand = Plus / Minus
Query: 1583 tgaaaacacagccagttccgacataaactggtccttggatgccatcaagacctctcaagt 1642
|||||||||| ||||| |||||||| | |||||||| |||||||| | |||||||| |
Sbjct: 1982 tgaaaacacatccagtcccgacatatataggtccttgaatgccatctaaacctctcatat 1923
Query: 1643 taataccgaaaaacacggtgttcctgttggcatatcgatcattcctgtcaatgccatcga 1702
| ||| | || || || || |||| |||||||||||||||| |||||||||||||||| |
Sbjct: 1922 tgatatcaaagaatacagtattccggttggcatatcgatcactcctgtcaatgccatcaa 1863
Query: 1703 atctctggggaaactgaacgtagcagacactccttcctaggttagggtccataaggaagc 1762
| ||||| || ||||| || ||||| || ||| | || || || ||||| | ||| |
Sbjct: 1862 acctctgtgggaactggacatagcacactctcttcccaagcaatggatccatcatgaaac 1803
Query: 1763 acatagcttccctgagagccttactgttgttaatgtagtgatcacaatcaagattcaaca 1822
|||| ||||| || |||||||||||||| || ||||||||||||||||| | |||||| |
Sbjct: 1802 acattgcttctctaagagccttactgttattgatgtagtgatcacaatccaaattcaaaa 1743
Query: 1823 tgtattgtccattggtaagcacagctgagacacgaacaagagcattcatggcaccagctt 1882
||| | |||| || ||||| || ||||| | || | ||||||||| || ||||| |
Sbjct: 1742 gatatggagcatttgttagcacggcagagactctgaccaaagcattcatagctccagcct 1683
Query: 1883 tcttgtgatgctggaatccaggacgcttttcacgagaaacatagaccaaacggggtagct 1942
| ||||| || | |||||||| | |||||| | |||||||| |||| ||| |||| |
Sbjct: 1682 ttttgtggtgattaaatccaggtctcttttctctggaaacatataccagacgtggtaatt 1623
Query: 1943 cattgccctcagtatcaaggccaccactgtgaccaaggaaaacctgaatcattccagg 2000
| || || ||||| ||| | || ||||| || ||||||||||||||||||||||||||
Sbjct: 1622 cgtttccatcagtgtcatgccctccactttggccaaggaaaacctgaatcattccagg 1565
Score = 79.8 bits (40), Expect = 7e-013
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 2284 tcaaatgtcagcatcgcagctccatcatcagatacatagcaagagaccttatccacaggg 2343
|||||||||||||| ||||| ||||||||||| ||||| || || ||||| || ||||||
Sbjct: 1281 tcaaatgtcagcatagcagcaccatcatcagaaacataacatgaaaccttgtcaacaggg 1222
Query: 2344 taatccacagcaagaatgga 2363
||||| || |||||||||||
Sbjct: 1221 taatcaactgcaagaatgga 1202
Score = 63.9 bits (32), Expect = 4e-008
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 709 ccgatcacccagaactgctcgttcctccaccactcgtcgatgcccaccccgctccacctc 768
|||||||||||||| || ||||| |||||||||||||| || || ||||| ||||| |||
Sbjct: 2874 ccgatcacccagaattgttcgtttctccaccactcgtcaataccaaccccactccatctc 2815
Query: 769 atctccag 776
|| |||||
Sbjct: 2814 atttccag 2807
Score = 61.9 bits (31), Expect = 2e-007
Identities = 82/99 (82%)
Strand = Plus / Minus
Query: 1162 tctgtcacagaaccgtagatccacccgatctcagttccccattcagtcttgtcctcatag 1221
||||| |||||||| || |||||||| | ||| | |||||||| || || || ||||||
Sbjct: 2421 tctgtaacagaaccataaatccaccctacctctttgccccattctgttttatcttcatag 2362
Query: 1222 ccacagcttataacatggatagcttctttcagaagagac 1260
|||||||| || |||||||| |||||||| || ||||||
Sbjct: 2361 ccacagctaatgacatggatggcttctttaagcagagac 2323
>gb|CV130875.1|CV130875 X9SP07b02 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 882
Score = 129 bits (65), Expect = 9e-028
Identities = 179/217 (82%)
Strand = Plus / Minus
Query: 1042 acctggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgcttg 1101
|||||||||| ||| || ||||||||||| || ||||||||||| | ||||| ||
Sbjct: 459 acctggttcaaacgatcagaaagattgataggagcagaccccttaagtgctgggcgagga 400
Query: 1102 ggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtct 1161
|||||||| ||||| || ||| || || || ||||||||||| ||||| | ||| |||
Sbjct: 399 ggcatgcaatagattgatatccaaccacgagcatgcatcttgaacccggtcaaaatatct 340
Query: 1162 tctgtcacagaaccgtagatccacccgatctcagttccccattcagtcttgtcctcatag 1221
||||| || ||||| |||||||| || ||||| | ||||||||||||||||| |||||
Sbjct: 339 tctgtaacggaaccatagatccatccaatctctttgccccattcagtcttgtcttcatat 280
Query: 1222 ccacagcttataacatggatagcttctttcagaagag 1258
|||||||| |||||||||||||||||||||| |||||
Sbjct: 279 ccacagctaataacatggatagcttctttcaaaagag 243
Score = 63.9 bits (32), Expect = 4e-008
Identities = 161/204 (78%)
Strand = Plus / Minus
Query: 303 ggtgaaggggtcgatgcgaacccacagcaaggagaagatggacgccagcaggatggccca 362
|||||| ||||||||||| ||||| ||||| ||||| ||||| || || || || | |||
Sbjct: 855 ggtgaaagggtcgatgcgcacccatagcaacgagaaaatggaggcaaggagaatagacca 796
Query: 363 gacgacgacgatggtcggggtgcggttctgcctgcccatgaggcccttgaggaacgggta 422
||||| ||| || || || || || || |||| |||| | ||||||||||| || ||
Sbjct: 795 gacgatgacaattgttggcgttcgattttgccgacccaacaaacccttgaggaaaggata 736
Query: 423 caggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactg 482
|| ||| | |||||||| | || |||||||||||||| ||||| || ||||| |||||
Sbjct: 735 caaatgggcaatgacccaaatagcaaagaagagcttgccaaagagaggaccccatgactg 676
Query: 483 gtacccgctgttgatggcgtagga 506
||| || ||||| ||||| |||||
Sbjct: 675 gtatccactgtttatggcatagga 652
>gb|CV244615.1|CV244615 WS0255.B21_C09 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0255_C09
3', mRNA sequence
Length = 402
Score = 129 bits (65), Expect = 9e-028
Identities = 188/229 (82%)
Strand = Plus / Minus
Query: 1583 tgaaaacacagccagttccgacataaactggtccttggatgccatcaagacctctcaagt 1642
|||||||||| ||||| |||||||| | |||||||| |||||||| | |||||||| |
Sbjct: 237 tgaaaacacatccagtcccgacatatataggtccttgaatgccatccaaacctctcatat 178
Query: 1643 taataccgaaaaacacggtgttcctgttggcatatcgatcattcctgtcaatgccatcga 1702
| ||| | || || || ||||||| |||||||||||||||| |||||||||||||||| |
Sbjct: 177 tgatatcaaagaatacagtgttccggttggcatatcgatcactcctgtcaatgccatcaa 118
Query: 1703 atctctggggaaactgaacgtagcagacactccttcctaggttagggtccataaggaagc 1762
| ||||| || ||||| || ||||| || ||| |||| || || ||||| | ||| |
Sbjct: 117 acctctgtgggaactggacatagcacactctctttccaagtaatggatccatcatgaaac 58
Query: 1763 acatagcttccctgagagccttactgttgttaatgtagtgatcacaatc 1811
|||| ||||| || |||||||||||||| || |||||||||||||||||
Sbjct: 57 acattgcttctctaagagccttactgttattgatgtagtgatcacaatc 9
>gb|DT489371.1|DT489371 WS02542.B21_A18 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02542_A18 3', mRNA sequence
Length = 402
Score = 129 bits (65), Expect = 9e-028
Identities = 188/229 (82%)
Strand = Plus / Minus
Query: 1583 tgaaaacacagccagttccgacataaactggtccttggatgccatcaagacctctcaagt 1642
|||||||||| ||||| |||||||| | |||||||| |||||||| | |||||||| |
Sbjct: 237 tgaaaacacatccagtcccgacatatataggtccttgaatgccatccaaacctctcatat 178
Query: 1643 taataccgaaaaacacggtgttcctgttggcatatcgatcattcctgtcaatgccatcga 1702
| ||| | || || || ||||||| |||||||||||||||| |||||||||||||||| |
Sbjct: 177 tgatatcaaagaatacagtgttccggttggcatatcgatcactcctgtcaatgccatcaa 118
Query: 1703 atctctggggaaactgaacgtagcagacactccttcctaggttagggtccataaggaagc 1762
| ||||| || ||||| || ||||| || ||| |||| || || ||||| | ||| |
Sbjct: 117 acctctgtgggaactggacatagcacactctctttccaagtaatggatccatcatgaaac 58
Query: 1763 acatagcttccctgagagccttactgttgttaatgtagtgatcacaatc 1811
|||| ||||| || |||||||||||||| || |||||||||||||||||
Sbjct: 57 acattgcttctctaagagccttactgttattgatgtagtgatcacaatc 9
>gb|CN518195.1|CN518195 GQ0092.B3_P04 GQ009 Populus trichocarpa x Populus deltoides cDNA
clone GQ0092_P04 5', mRNA sequence
Length = 491
Score = 127 bits (64), Expect = 3e-027
Identities = 196/240 (81%)
Strand = Plus / Minus
Query: 1196 ttccccattcagtcttgtcctcatagccacagcttataacatggatagcttctttcagaa 1255
||||||| || | |||||| ||||| |||||||| || ||||| ||||||||||| ||||
Sbjct: 436 ttccccagtctgacttgtcttcatatccacagctgatgacatgaatagcttctttgagaa 377
Query: 1256 gagactccggagttgcggactgaggaacaccaccatactccatcagagtggaggcaacaa 1315
||||||| || || ||||||| ||||||||||| | |||||| || ||||| |||||||
Sbjct: 376 gagactctggggtggcggactccggaacaccaccgttctccataagggtggaagcaacaa 317
Query: 1316 acgctgcggactggccaaatctcttctccaggctcatttgagacataagaagtgatttct 1375
|| | | || ||||||||||| ||||| || ||||||||||||| || | |||||| |
Sbjct: 316 acacggttgattggccaaatcttttctcaagtgtcatttgagacatgagcaatgattttt 257
Query: 1376 cgtcgtcaaatccagcgccttcaactccctcctctatatcttcaaggttgaatactggca 1435
| || || ||||||| |||||||| || || ||||||||||| | |||||||| ||||
Sbjct: 256 catcatcgaatccagtaccttcaaccccttcttctatatcttctaaattgaataccggca 197
>gb|AY095297.1| Populus tremuloides cellulose synthase (CesA2) mRNA, complete cds
Length = 3277
Score = 123 bits (62), Expect = 5e-026
Identities = 178/217 (82%)
Strand = Plus / Minus
Query: 1966 ccactgtgaccaaggaaaacctgaatcattccaggatggtcccnggtattgtttcctggc 2025
||||||||||| || || || |||||||| ||||| || |||| ||||||||||| |||
Sbjct: 1471 ccactgtgaccgagaaatacttgaatcataccagggtgatccctcgtattgtttccaggc 1412
Query: 2026 catggtgtgccatcttgcatgatccatccttcctcaggaactttctgtgccttagcaaca 2085
|||||||| ||||||||||| ||||| || || |||||| |||||||| || || |||
Sbjct: 1411 catggtgttccatcttgcataatccacccctctgtaggaaccttctgtgcttttgctaca 1352
Query: 2086 aggccatttaccctaactttgaattcttcatattctctcttcatggcccggcggtcttta 2145
| |||||| || ||| |||||||||||||||||||||||||| || || || || |||
Sbjct: 1351 atcgcatttatccgaaccttgaattcttcatattctctcttcatagctcgacgttcctta 1292
Query: 2146 acaaatgaagggtgcactttgtccttcaagtaatcaa 2182
||||| | || || ||||||||||| | ||||||||
Sbjct: 1291 acaaaggttggctgaactttgtccttgaggtaatcaa 1255
Score = 77.8 bits (39), Expect = 3e-012
Identities = 135/167 (80%)
Strand = Plus / Minus
Query: 322 acccacagcaaggagaagatggacgccagcaggatggcccagacgacgacgatggtcggg 381
||||| ||||||||||||||||| ||||| || | | ||| | || || || |||||
Sbjct: 3052 acccaaagcaaggagaagatggaagccaggagcactgaccatataaccacaatagtcggt 2993
Query: 382 gtgcggttctgcctgcccatgaggcccttgaggaacgggtacaggtggacgatgacccag 441
|| | ||| ||||| ||||| || || |||||||| ||||| || ||||| || ||||||
Sbjct: 2992 gtcctgttttgcctccccattagacctttgaggaatgggtagagatggacaatcacccag 2933
Query: 442 aaggcgaagaagagcttgccgaagagcgggccccacgactggtaccc 488
||||| ||||||||||| ||||| || || ||||| |||||||||||
Sbjct: 2932 aaggcaaagaagagcttcccgaatagaggtccccatgactggtaccc 2886
Score = 60.0 bits (30), Expect = 7e-007
Identities = 117/146 (80%)
Strand = Plus / Minus
Query: 1582 ttgaaaacacagccagttccgacataaactggtccttggatgccatcaagacctctcaag 1641
|||||||| || || || || ||||| ||||| || || || ||||| ||||| ||| |
Sbjct: 1855 ttgaaaacgcatcctgtgcccacatacactggaccctgaattccatctagacccttcatg 1796
Query: 1642 ttaataccgaaaaacacggtgttcctgttggcatatcgatcattcctgtcaatgccatcg 1701
|||||| |||| || || ||||| |||||||| |||||||||| | |||||||||||
Sbjct: 1795 ttaatatcgaagaaaacagtgtttctgttggcgtatcgatcatgtgtatcaatgccatca 1736
Query: 1702 aatctctggggaaactgaacgtagca 1727
||||| || ||||| || ||||||||
Sbjct: 1735 aatctttgaggaaattgcacgtagca 1710
Score = 48.1 bits (24), Expect = 0.003
Identities = 174/224 (77%)
Strand = Plus / Minus
Query: 1024 ccaagagcccaccggagcacctggttcagacggtccgaaagattgatgggggcagacccc 1083
||||||||||| |||||||| ||||| || || || || ||||||||||| || || |||
Sbjct: 2350 ccaagagcccagcggagcacttggtttagccgatctgatagattgatgggagctgaaccc 2291
Query: 1084 ttgaaagctggccgcttgggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttg 1143
|| || || | | ||| ||||| ||||| || |||| |||||| || ||||||||
Sbjct: 2290 ttaaatgcagctctctttggcatacagtaaatagacctccagccacgacaatgcatctta 2231
Query: 1144 aatccggtgagaatgtcttctgtcacagaaccgtagatccacccgatctcagttccccat 1203
|| || || ||||| || || || | |||||||| ||||| || | ||| |||||||
Sbjct: 2230 aaacctgtcagaatatcctccgtgatcgaaccgtaaatccagcccagctcgagtccccat 2171
Query: 1204 tcagtcttgtcctcatagccacagcttataacatggatagcttc 1247
||||| ||||| ||||| ||||| || || |||||||| |||||
Sbjct: 2170 tcagttttgtcttcatatccacaactgatcacatggatggcttc 2127
>gb|AY573572.1| Populus tremula x Populus tremuloides cellulose synthase (CesA2)
mRNA, complete cds
Length = 3991
Score = 123 bits (62), Expect = 5e-026
Identities = 136/161 (84%)
Strand = Plus / Minus
Query: 1972 tgaccaaggaaaacctgaatcattccaggatggtcccnggtattgtttcctggccatggt 2031
||||||||||| |||||||||||||||||||| || | | ||| || |||||||||||
Sbjct: 2013 tgaccaaggaagacctgaatcattccaggatgatctctgacattattccctggccatgga 1954
Query: 2032 gtgccatcttgcatgatccatccttcctcaggaactttctgtgccttagcaacaaggcca 2091
|||||||| ||||| |||| || ||||||||||| ||||||||| | ||||| | |||
Sbjct: 1953 gtgccatcctgcattgtccaaccatcctcaggaaccttctgtgccgtggcaactaaccca 1894
Query: 2092 tttaccctaactttgaattcttcatattctctcttcatggc 2132
|||| | ||||||||| |||||||| ||||||||||||||
Sbjct: 1893 tttattcgaactttgaactcttcatactctctcttcatggc 1853
Score = 69.9 bits (35), Expect = 7e-010
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 406 cccttgaggaacgggtacaggtggacgatgacccagaaggcgaagaagagcttgccgaag 465
||||||||||||||||| |||||||| || ||||| || || ||||| ||||| ||||||
Sbjct: 3588 cccttgaggaacgggtaaaggtggacaattacccacaacgcaaagaatagcttaccgaag 3529
Query: 466 agcgggcccca 476
||||| |||||
Sbjct: 3528 agcggacccca 3518
Score = 56.0 bits (28), Expect = 1e-005
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 1747 gggtccataaggaagcacatagcttccctgagagccttactgttgttaatgtagtgatca 1806
|||||||| | ||||||||| ||||| | || |||||||| ||||| || || ||||||
Sbjct: 2238 gggtccatcatgaagcacatggcttcgcgaagtgccttactattgtttatataatgatca 2179
Query: 1807 caatcaagattcaacatgta 1826
||||||| ||||| ||||||
Sbjct: 2178 caatcaacattcagcatgta 2159
Score = 50.1 bits (25), Expect = 6e-004
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 1180 atccacccgatctcagttccccattcagtcttgtcctcatagccacagcttataacatgg 1239
|||||||| ||||| ||||||||||||| || || ||||| ||||| || || |||||
Sbjct: 2817 atccacccaatctcttttccccattcagttttatcttcataaccacaactaatgacatga 2758
Query: 1240 atagcttctttca 1252
|| ||||||||||
Sbjct: 2757 atggcttctttca 2745
>gb|AJ778476.1|AJ778476 AJ778476 Populus euphratica cambium 3-6 months Populus euphratica
cDNA clone P0000600001D07F1, mRNA sequence
Length = 677
Score = 121 bits (61), Expect = 2e-025
Identities = 178/217 (82%)
Strand = Plus / Minus
Query: 1042 acctggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgcttg 1101
|||||||||| ||| || ||||||||||| || ||||| ||||| || || || ||
Sbjct: 229 acctggttcaaacgatcagaaagattgataggagcagagcccttaaatgcagggcgagga 170
Query: 1102 ggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtct 1161
|||||||| ||||| || ||| || || || ||||||||||| || || | ||| |||
Sbjct: 169 ggcatgcaatagattgatatccaaccacgagcatgcatcttgaacccagtcaaaatatct 110
Query: 1162 tctgtcacagaaccgtagatccacccgatctcagttccccattcagtcttgtcctcatag 1221
||||| |||||||| |||||||| || ||||| | ||||||||||||||||| |||||
Sbjct: 109 tctgtaacagaaccatagatccatccaatctctttgccccattcagtcttgtcttcatat 50
Query: 1222 ccacagcttataacatggatagcttctttcagaagag 1258
|||||||| |||||||||||||||||||||| |||||
Sbjct: 49 ccacagctaataacatggatagcttctttcaaaagag 13
>gb|CK107258.1|CK107258 UB51DPD11.5pR Populus active cambium cDNA library Populus tremula
cDNA clone UB51DPD11 5', mRNA sequence
Length = 596
Score = 119 bits (60), Expect = 8e-025
Identities = 260/323 (80%), Gaps = 3/323 (0%)
Strand = Plus / Minus
Query: 1864 gcattcatggcaccagctttcttgtga-tgctggaatccaggacgcttttcacgaga-aa 1921
|||||||| || || |||||||| ||| |||||||||||||| | |||||||||||| ||
Sbjct: 484 gcattcattgctccggctttcttttgaatgctggaatccaggcctcttttcacgagataa 425
Query: 1922 catagaccaaacggggtagctcattgccctcagtatcaaggccaccactgtgaccaagga 1981
|||| || | ||| ||||||||||| || || ||||| || || || |||||||| | ||
Sbjct: 424 catatacaagacgaggtagctcatttccatccgtatcgagccccccgctgtgacctaaga 365
Query: 1982 aaacctgaatcattccaggatggtcccnggtattgtttcctggccatggtgtgccat-ct 2040
| ||||| |||||||| || || |||| || ||| ||||| |||||||| || |||| |
Sbjct: 364 acacctggatcattcctgggtgatccctgggattatttccaggccatggagttccatccg 305
Query: 2041 tgcatgatccatccttcctcaggaactttctgtgccttagcaacaaggccatttacccta 2100
||||| |||| ||||| || || | ||||| || || |||||||| |||| | ||
Sbjct: 304 tgcattgtccaaccttcttctggcatcttctgagctttggcaacaagagcattgatccgc 245
Query: 2101 actttgaattcttcatattctctcttcatggcccggcggtctttaacaaatgaagggtgc 2160
|| |||||||||||||||||||||||||| || ||||| ||||| ||||| ||||| ||
Sbjct: 244 accttgaattcttcatattctctcttcattgctcggcgctctttcacaaaagaaggctgt 185
Query: 2161 actttgtccttcaagtaatcaat 2183
| |||||||||| ||||||||
Sbjct: 184 atcttgtccttcagataatcaat 162
>gb|AY162180.1| Populus tremuloides cellulose synthase (CesA7) mRNA, complete cds
Length = 3809
Score = 119 bits (60), Expect = 8e-025
Identities = 140/167 (83%)
Strand = Plus / Minus
Query: 1966 ccactgtgaccaaggaaaacctgaatcattccaggatggtcccnggtattgtttcctggc 2025
||||| ||||||||||||||||||||||| ||||||||||| | ||||||||| |||
Sbjct: 1738 ccactttgaccaaggaaaacctgaatcatgccaggatggtctcgtacattgtttccaggc 1679
Query: 2026 catggtgtgccatcttgcatgatccatccttcctcaggaactttctgtgccttagcaaca 2085
||||| || ||||||||||| |||| || || || ||||| || ||||| | | |||
Sbjct: 1678 catggagttccatcttgcattgtccaaccatcttccggaaccttttgtgctgtggaaacc 1619
Query: 2086 aggccatttaccctaactttgaattcttcatattctctcttcatggc 2132
| ||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 1618 aacccatttatcctcactttgaattcttcatattctctcttcatggc 1572
>gb|CA934196.1|CA934196 MTU3TS.P4.D08 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 482
Score = 113 bits (57), Expect = 5e-023
Identities = 198/245 (80%)
Strand = Plus / Plus
Query: 409 ttgaggaacgggtacaggtggacgatgacccagaaggcgaagaagagcttgccgaagagc 468
|||||||| ||||| || |||||||| ||||||||||| ||||| |||||||| || ||
Sbjct: 231 ttgaggaaagggtagagatggacgatcacccagaaggcaaagaaaagcttgccaaaaagt 290
Query: 469 gggccccacgactggtacccgctgttgatggcgtaggagatgccggcgacgacgccgacc 528
|||||||||||||| || || ||||||||||| | ||| || ||||| || || || |||
Sbjct: 291 gggccccacgactgataaccactgttgatggcatgggatatcccggcaacaacacccacc 350
Query: 529 aggttgatgatcaggatggtggtgggcgggatcaggagcgtcgtccacttgaacatgtac 588
| ||| | ||| |||| || || |||||||| || || || ||||| ||||||| |||
Sbjct: 351 aagttaacgatgaggagagttgttggcgggataagtagagttgtccatttgaacaagtat 410
Query: 589 agctccgcgaagtcgccgtcctcgtccgaggccttggaggtgacggtgaagttggtgtcg 648
| || || | || ||||||||||| || |||||||| || || |||||||||||||||
Sbjct: 411 aattcagcagaatcaccgtcctcgtctgatgccttggacgtaacagtgaagttggtgtcg 470
Query: 649 atgcc 653
|||||
Sbjct: 471 atgcc 475
>gb|CF235713.1|CF235713 PtaJXT0026B7B0703 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 639
Score = 105 bits (53), Expect = 1e-020
Identities = 136/164 (82%)
Strand = Plus / Minus
Query: 1966 ccactgtgaccaaggaaaacctgaatcattccaggatggtcccnggtattgtttcctggc 2025
||||||||||| || || || |||||||| ||||| || |||| ||||||||||| |||
Sbjct: 180 ccactgtgaccgagaaatacttgaatcataccagggtgatccctcgtattgtttccaggc 121
Query: 2026 catggtgtgccatcttgcatgatccatccttcctcaggaactttctgtgccttagcaaca 2085
|||||||| ||||||||||| ||||| || || |||||| |||||||| || || |||
Sbjct: 120 catggtgttccatcttgcataatccacccctctgtaggaaccttctgtgcttttgctaca 61
Query: 2086 aggccatttaccctaactttgaattcttcatattctctcttcat 2129
| |||||| || ||| ||||||||||| ||||||||||||||
Sbjct: 60 atcgcatttatccgaaccttgaattcttcgtattctctcttcat 17
Score = 58.0 bits (29), Expect = 3e-006
Identities = 119/149 (79%)
Strand = Plus / Minus
Query: 1582 ttgaaaacacagccagttccgacataaactggtccttggatgccatcaagacctctcaag 1641
|||||||| || || || || ||||| ||||| || || || ||||| ||||| ||| |
Sbjct: 564 ttgaaaacgcatcctgtgcccacatacactggaccctgaattccatctagacccttcatg 505
Query: 1642 ttaataccgaaaaacacggtgttcctgttggcatatcgatcattcctgtcaatgccatcg 1701
|||||| | || || || ||||| |||||||| |||||||||| | |||||||||||
Sbjct: 504 ttaatatcaaagaaaacagtgtttctgttggcgtatcgatcatgtgtatcaatgccatca 445
Query: 1702 aatctctggggaaactgaacgtagcagac 1730
||||| || ||||| || |||||||||||
Sbjct: 444 aatctttgaggaaattgcacgtagcagac 416
Score = 42.1 bits (21), Expect = 0.16
Identities = 51/61 (83%)
Strand = Plus / Minus
Query: 1832 cattggtaagcacagctgagacacgaacaagagcattcatggcaccagctttcttgtgat 1891
|||||||||| || || ||||| |||| || |||||||||||||| ||||| || ||||
Sbjct: 314 cattggtaagtactgcagagacccgaatcagggcattcatggcaccggcttttttatgat 255
Query: 1892 g 1892
|
Sbjct: 254 g 254
>gb|AJ771596.1|AJ771596 AJ771596 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0001600003B06F1, mRNA sequence
Length = 575
Score = 105 bits (53), Expect = 1e-020
Identities = 86/97 (88%)
Strand = Plus / Minus
Query: 1162 tctgtcacagaaccgtagatccacccgatctcagttccccattcagtcttgtcctcatag 1221
||||| |||||||| |||||||| || ||||| | ||||||||||||||||| |||||
Sbjct: 575 tctgtaacagaaccatagatccatccaatctctttgccccattcagtcttgtcttcatat 516
Query: 1222 ccacagcttataacatggatagcttctttcagaagag 1258
|||||||| |||||||||||||||||||||| |||||
Sbjct: 515 ccacagctaataacatggatagcttctttcaaaagag 479
>gb|AY573573.2| Populus tremula x Populus tremuloides cellulose synthase (CesA3-1)
mRNA, complete cds
Length = 3250
Score = 105 bits (53), Expect = 1e-020
Identities = 143/173 (82%)
Strand = Plus / Minus
Query: 2284 tcaaatgtcagcatcgcagctccatcatcagatacatagcaagagaccttatccacaggg 2343
|||||||| ||||| ||||| ||||||||||| |||||||| || || |||||||| ||
Sbjct: 951 tcaaatgtaagcatagcagcaccatcatcagacacatagcaggaaactttatccacggga 892
Query: 2344 taatccacagcaagaatggatagcacggtattggcagtgacaagaggaggctccttcatt 2403
|| ||||||||||| ||||| || || ||||||||||||| | |||||||| |||| |
Sbjct: 891 tagtccacagcaaggatggaaaggactgtattggcagtgatcaatggaggctctttcagt 832
Query: 2404 gggtcgactgtactgacgaaaatgtcaacagcagccaactgagatggctcacc 2456
|| || || ||||| ||||||| || |||||||| | |||||| ||||||||
Sbjct: 831 ggatcaacagtactcacgaaaaaatccacagcagcaagctgagaaggctcacc 779
Score = 81.8 bits (41), Expect = 2e-013
Identities = 178/224 (79%)
Strand = Plus / Minus
Query: 1975 ccaaggaaaacctgaatcattccaggatggtcccnggtattgtttcctggccatggtgtg 2034
|||||||| ||||||||||| ||||| || || | || || ||||||||||| |||||
Sbjct: 1260 ccaaggaatacctgaatcatgccagggtgatcacgtgtgttatttcctggccaaggtgtt 1201
Query: 2035 ccatcttgcatgatccatccttcctcaggaactttctgtgccttagcaacaaggccattt 2094
|| |||||||| ||||||| || ||||| |||||||||||| | || ||| ||||
Sbjct: 1200 ccgtcttgcatagtccatccctcgtcaggtgttttctgtgcctttggtaccagggcatta 1141
Query: 2095 accctaactttgaattcttcatattctctcttcatggcccggcggtctttaacaaatgaa 2154
|| | |||||| | |||||||| || || ||||| || | ||| ||||| || || |||
Sbjct: 1140 actcggactttgtactcttcatagtcccttttcatcgctctgcgttctttcacgaaagaa 1081
Query: 2155 gggtgcactttgtccttcaagtaatcaattttctgggagaagta 2198
|| || || || || |||||||||||||||||||| ||||||||
Sbjct: 1080 ggctgaaccttatctttcaagtaatcaattttctgtgagaagta 1037
Score = 65.9 bits (33), Expect = 1e-008
Identities = 183/233 (78%)
Strand = Plus / Minus
Query: 1015 tccacggacccaagagcccaccggagcacctggttcagacggtccgaaagattgatgggg 1074
||||| || ||||||||||||||||| ||||||| || | || || |||||||||||
Sbjct: 2217 tccacagatccaagagcccaccggagaacctggtgcaatctatcagacagattgatgggt 2158
Query: 1075 gcagaccccttgaaagctggccgcttgggcatgcagtagatcgaccgccagcctcgcgcg 1134
||||| || ||||| ||||||| |||||||||||| || || | ||| ||||| |
Sbjct: 2157 gcagatcctttgaatgctggccttacgggcatgcagtatattgatctccatcctcggcag 2098
Query: 1135 tgcatcttgaatccggtgagaatgtcttctgtcacagaaccgtagatccacccgatctca 1194
|||||||||||||| | | || || || || || || || || ||||| || |||||
Sbjct: 2097 tgcatcttgaatccacttaagatatcctcagtgaccgacccataaatccaaccaatctct 2038
Query: 1195 gttccccattcagtcttgtcctcatagccacagcttataacatggatagcttc 1247
|||||||||||||||| || ||| ||||||||| || ||||| ||||||||
Sbjct: 2037 tttccccattcagtcttctcttcaaagccacagccgatgacatgaatagcttc 1985
Score = 54.0 bits (27), Expect = 4e-005
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 1582 ttgaaaacacagccagttccgacataaactggtccttggatgccatc 1628
||||||||||| |||||||| ||||| | ||||||||| ||||||||
Sbjct: 1653 ttgaaaacacaaccagttcccacatacattggtccttgaatgccatc 1607
Score = 48.1 bits (24), Expect = 0.003
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 2514 ccacttagggaactgatccaatatccacgaaagagcaaaccagatctcacatataacaga 2573
|||||| || || |||||||| | ||| |||| |||||||||||||||||||| |||||
Sbjct: 721 ccacttgggaaattgatccaacacccaagaaaacgcaaaccagatctcacatatgacaga 662
Score = 42.1 bits (21), Expect = 0.16
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 436 acccagaaggcgaagaagagcttgccgaagagcgggcccca 476
||||||||||| ||||||| |||||| ||||| || |||||
Sbjct: 2796 acccagaaggcaaagaagaccttgccaaagagaggtcccca 2756
>gb|CN522480.1|CN522480 GQ0123.B3_H17 GQ012 Populus trichocarpa x Populus deltoides cDNA
clone GQ0123_H17 5', mRNA sequence
Length = 411
Score = 99.6 bits (50), Expect = 8e-019
Identities = 108/128 (84%)
Strand = Plus / Minus
Query: 1264 ggagttgcggactgaggaacaccaccatactccatcagagtggaggcaacaaacgctgcg 1323
|||||||| ||||||||||||||||||| |||||| || ||||| |||||||| | ||
Sbjct: 352 ggagttgcagactgaggaacaccaccattctccatgagtgtggaagcaacaaaaacagct 293
Query: 1324 gactggccaaatctcttctccaggctcatttgagacataagaagtgatttctcgtcgtca 1383
|||| ||||| |||||||| |||||| | || ||||| |||||||| ||||| || |||
Sbjct: 292 gactnnccaaacctcttctctaggctcgtctgtgacatgagaagtgacttctcatcatca 233
Query: 1384 aatccagc 1391
||||||||
Sbjct: 232 aatccagc 225
>gb|CV227790.1|CV227790 WS0168.B21_D13 PT-DX-A-7 Populus trichocarpa cDNA clone WS0168_D13
3', mRNA sequence
Length = 817
Score = 95.6 bits (48), Expect = 1e-017
Identities = 165/204 (80%)
Strand = Plus / Plus
Query: 303 ggtgaaggggtcgatgcgaacccacagcaaggagaagatggacgccagcaggatggccca 362
|||||||||||||||||| ||||| ||||||||||| ||||| || || || || | |||
Sbjct: 487 ggtgaaggggtcgatgcgcacccatagcaaggagaatatggaagcaaggagtatagacca 546
Query: 363 gacgacgacgatggtcggggtgcggttctgcctgcccatgaggcccttgaggaacgggta 422
||||| ||| || || || || || || || | |||| | ||||||||||| || ||
Sbjct: 547 gacgatgacaattgttggtgtacgattatgtcgacccaacaaacccttgaggaaaggata 606
Query: 423 caggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactg 482
|| ||| | |||||||| | || ||||| ||||||||||||||||| ||||| |||||
Sbjct: 607 caaatgggcaatgacccaaatagcaaagaacagcttgccgaagagcggaccccatgactg 666
Query: 483 gtacccgctgttgatggcgtagga 506
|||||||||||| |||||| ||||
Sbjct: 667 gtacccgctgtttatggcgaagga 690
>gb|DT493580.1|DT493580 WS0111.BR_M17 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0111_M17
5', mRNA sequence
Length = 514
Score = 95.6 bits (48), Expect = 1e-017
Identities = 81/92 (88%)
Strand = Plus / Minus
Query: 409 ttgaggaacgggtacaggtggacgatgacccagaaggcgaagaagagcttgccgaagagc 468
|||||||| ||||| || |||||||| ||||||||||| ||||| |||||||| |||||
Sbjct: 93 ttgaggaaagggtagagatggacgatcacccagaaggcaaagaaaagcttgccaaagagt 34
Query: 469 gggccccacgactggtacccgctgttgatggc 500
|| |||||||||||||| || |||||||||||
Sbjct: 33 ggaccccacgactggtaaccactgttgatggc 2
>gb|AY573575.1| Populus tremula x Populus tremuloides cellulose synthase (CesA4)
mRNA, complete cds
Length = 3778
Score = 95.6 bits (48), Expect = 1e-017
Identities = 137/167 (82%)
Strand = Plus / Minus
Query: 1966 ccactgtgaccaaggaaaacctgaatcattccaggatggtcccnggtattgtttcctggc 2025
||||| ||||||||||||||||| ||||| ||||||||||| | ||||||||| |||
Sbjct: 1772 ccactttgaccaaggaaaacctggatcatgccaggatggtctcgtacattgtttccaggc 1713
Query: 2026 catggtgtgccatcttgcatgatccatccttcctcaggaactttctgtgccttagcaaca 2085
||||| || ||||||||||| |||| || || || ||||| || || || | | |||
Sbjct: 1712 catggagttccatcttgcattgtccaaccatcttccggaaccttttgcgctgtggaaacc 1653
Query: 2086 aggccatttaccctaactttgaattcttcatattctctcttcatggc 2132
| ||||||| ||| |||||||| |||||||||||||||||||||||
Sbjct: 1652 aacccatttatcctcactttgaactcttcatattctctcttcatggc 1606
>gb|AJ777820.1|AJ777820 AJ777820 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400035F01F1, mRNA sequence
Length = 658
Score = 93.7 bits (47), Expect = 5e-017
Identities = 200/251 (79%)
Strand = Plus / Minus
Query: 604 ccgtcctcgtccgaggccttggaggtgacggtgaagttggtgtcgatgccggccagcacc 663
||||||||||| || |||||||| || || |||||||||||||| ||||| || || ||
Sbjct: 465 ccgtcctcgtctgatgccttggacgtaacagtgaagttggtgtcaatgccagcaagtact 406
Query: 664 ttgagcaggccctggaacacggcgaagaggtgcgcggagatgcccccgatcacccagaac 723
||||||| ||| ||||| || || || || || || || | || ||||| ||||| |||
Sbjct: 405 ttgagcaagccttggaaaacagcaaaaagatgggctgaaacaccaccgataacccaaaac 346
Query: 724 tgctcgttcctccaccactcgtcgatgcccaccccgctccacctcatctccaggatgccc 783
|| || |||||||||||||| || || || || || |||||||||||||||| ||||||
Sbjct: 345 tgttcattcctccaccactcatcaatcccaacaccactccacctcatctccaagatgccg 286
Query: 784 gtggcgaagatcgagatgaagagggagatgaaccagatgctggcgaagttgctgatctct 843
|| || ||||| || | ||||| || || ||||| ||||| |||| ||| || |||| |
Sbjct: 285 gttgcaaagatggaaagaaagagagaaataaaccatatgcttgcgatgttactaatctgt 226
Query: 844 ggaatgatgaa 854
||||| |||||
Sbjct: 225 ggaataatgaa 215
Score = 42.1 bits (21), Expect = 0.16
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 1027 agagcccaccggagcacctggttcagacggtccgaaagatt 1067
|||||||| || ||||| ||||||||||| || ||||||||
Sbjct: 42 agagcccatcgaagcacttggttcagacgatcagaaagatt 2
>gb|CF229283.1|CF229283 PtaXM0023E4E0410 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 642
Score = 91.7 bits (46), Expect = 2e-016
Identities = 214/270 (79%)
Strand = Plus / Minus
Query: 606 gtcctcgtccgaggccttggaggtgacggtgaagttggtgtcgatgccggccagcacctt 665
||||||||| || |||||||| || || |||||||||||||||||||| || || || ||
Sbjct: 472 gtcctcgtctgatgccttggacgtaacagtgaagttggtgtcgatgccagcaagtacttt 413
Query: 666 gagcaggccctggaacacggcgaagaggtgcgcggagatgcccccgatcacccagaactg 725
||||| ||| ||||| || || || || || || || | || ||||| ||||| |||||
Sbjct: 412 gagcaagccttggaaaacagcaaaaagatgggctgaaacaccaccgatgacccaaaactg 353
Query: 726 ctcgttcctccaccactcgtcgatgcccaccccgctccacctcatctccaggatgcccgt 785
|| |||||||||||||| || || || || || |||||||||||||||| ||| || ||
Sbjct: 352 ttcattcctccaccactcatcaatcccaacaccactccacctcatctccaagataccggt 293
Query: 786 ggcgaagatcgagatgaagagggagatgaaccagatgctggcgaagttgctgatctctgg 845
|| ||||| || | ||||| || || ||||| ||||| |||| ||| || |||| |||
Sbjct: 292 tgcaaagatggaaagaaagagagaaataaaccatatgcttgcgatgttactaatctgtgg 233
Query: 846 aatgatgaactttccggtgagcagacagat 875
||| ||||| || | ||||| ||||||||
Sbjct: 232 aataatgaatttgtctgtgagtagacagat 203
Score = 42.1 bits (21), Expect = 0.16
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 1027 agagcccaccggagcacctggttcagacggtccgaaagatt 1067
|||||||| || ||||| ||||||||||| || ||||||||
Sbjct: 51 agagcccatcgaagcacttggttcagacgatcagaaagatt 11
>gb|CK092703.1|CK092703 G092P25.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G092P25 3', mRNA sequence
Length = 684
Score = 87.7 bits (44), Expect = 3e-015
Identities = 164/204 (80%)
Strand = Plus / Plus
Query: 303 ggtgaaggggtcgatgcgaacccacagcaaggagaagatggacgccagcaggatggccca 362
|||||||||||||||||| ||||| ||||||||||| ||||| || || || || | |||
Sbjct: 390 ggtgaaggggtcgatgcgcacccatagcaaggagaaaatggaggcaaggagaatagacca 449
Query: 363 gacgacgacgatggtcggggtgcggttctgcctgcccatgaggcccttgaggaacgggta 422
||||| ||| || || || || || || |||| |||| | ||||||||||| || ||
Sbjct: 450 gacgatgacaattgttggcgtacgattttgccgacccagcaaacccttgaggaaaggata 509
Query: 423 caggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactg 482
|| ||| | |||||||| | || |||||||||||||| ||||| || ||||| |||||
Sbjct: 510 caaatgggcaatgacccaaatagcaaagaagagcttgccaaagagaggaccccatgactg 569
Query: 483 gtacccgctgttgatggcgtagga 506
||| |||||||| ||||| |||||
Sbjct: 570 gtatccgctgtttatggcatagga 593
>gb|CK102806.1|CK102806 G092P25.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G092P25 5', mRNA sequence
Length = 448
Score = 87.7 bits (44), Expect = 3e-015
Identities = 164/204 (80%)
Strand = Plus / Minus
Query: 303 ggtgaaggggtcgatgcgaacccacagcaaggagaagatggacgccagcaggatggccca 362
|||||||||||||||||| ||||| ||||||||||| ||||| || || || || | |||
Sbjct: 296 ggtgaaggggtcgatgcgcacccatagcaaggagaaaatggaggcaaggagaatagacca 237
Query: 363 gacgacgacgatggtcggggtgcggttctgcctgcccatgaggcccttgaggaacgggta 422
||||| ||| || || || || || || |||| |||| | ||||||||||| || ||
Sbjct: 236 gacgatgacaattgttggcgtacgattttgccgacccagcaaacccttgaggaaaggata 177
Query: 423 caggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactg 482
|| ||| | |||||||| | || |||||||||||||| ||||| || ||||| |||||
Sbjct: 176 caaatgggcaatgacccaaatagcaaagaagagcttgccaaagagaggaccccatgactg 117
Query: 483 gtacccgctgttgatggcgtagga 506
||| |||||||| ||||| |||||
Sbjct: 116 gtatccgctgtttatggcatagga 93
>gb|CV242542.1|CV242542 WS02515.B21_F16 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02515_F16 3', mRNA sequence
Length = 861
Score = 87.7 bits (44), Expect = 3e-015
Identities = 164/204 (80%)
Strand = Plus / Plus
Query: 303 ggtgaaggggtcgatgcgaacccacagcaaggagaagatggacgccagcaggatggccca 362
|||||||||||||||||| ||||| ||||||||||| ||||| || || || || | |||
Sbjct: 488 ggtgaaggggtcgatgcgcacccatagcaaggagaatatggaagcaaggagtatagacca 547
Query: 363 gacgacgacgatggtcggggtgcggttctgcctgcccatgaggcccttgaggaacgggta 422
||||| ||| || || || || || || || | |||| | ||||||||||| || ||
Sbjct: 548 gacgatgacaattgttggtgtacgattttgtcgacccaacaaacccttgaggaaaggata 607
Query: 423 caggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactg 482
|| ||| | |||||||| | || ||||| |||||||| |||||||| ||||| |||||
Sbjct: 608 caaatgggcaatgacccaaatagcaaagaacagcttgccaaagagcggaccccatgactg 667
Query: 483 gtacccgctgttgatggcgtagga 506
|||||||||||| |||||| ||||
Sbjct: 668 gtacccgctgtttatggcgaagga 691
>gb|AF081534.1|AF081534 Populus x canescens cellulose synthase (cel1) mRNA, complete cds
Length = 3395
Score = 87.7 bits (44), Expect = 3e-015
Identities = 134/164 (81%)
Strand = Plus / Minus
Query: 2101 actttgaattcttcatattctctcttcatggcccggcggtctttaacaaatgaagggtgc 2160
||||||||||||||||||||||| ||||| || | ||| || || ||||| || |||
Sbjct: 1258 actttgaattcttcatattctcttttcatagctctgcgctccttcacaaagttgggatgc 1199
Query: 2161 actttgtccttcaagtaatcaattttctgggagaagtaccattcaggagctctaggttca 2220
|||||||| |||||||| ||||| ||||| | |||||| | |||||||| || || |||
Sbjct: 1198 actttgtctttcaagtagtcaatcttctgagtgaagtagaactcaggagcccttggctca 1139
Query: 2221 atgttgtacttcttaacaaatggtacccattttctagcaaactc 2264
||||| | |||||| |||||| ||||| ||||||||||||||
Sbjct: 1138 atgttatgcttcttgcaaaatggaacccactttctagcaaactc 1095
Score = 77.8 bits (39), Expect = 3e-012
Identities = 108/131 (82%)
Strand = Plus / Minus
Query: 1759 aagcacatagcttccctgagagccttactgttgttaatgtagtgatcacaatcaagattc 1818
|||||||| ||||| || | |||||| ||||| || ||||| || |||||||| | ||||
Sbjct: 1600 aagcacatggcttctcttacagccttgctgttattgatgtaatggtcacaatccaaattc 1541
Query: 1819 aacatgtattgtccattggtaagcacagctgagacacgaacaagagcattcatggcacca 1878
||||| | || ||||||| ||||| |||||||| ||| |||||||||||||||||
Sbjct: 1540 aacataaaaggtgcattggtgagcactgctgagacgagaatcagagcattcatggcacct 1481
Query: 1879 gctttcttgtg 1889
|||||||||||
Sbjct: 1480 gctttcttgtg 1470
Score = 54.0 bits (27), Expect = 4e-005
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 1984 acctgaatcattccaggatggtcccnggtattgtttcctggccatggtgtgccatcttgc 2043
|||||||||||||||||||| || | || ||||||| |||||||| || ||||| |||
Sbjct: 1375 acctgaatcattccaggatgatcacgtgtgatgtttccaggccatggggtaccatcctgc 1316
Query: 2044 atgatccatccttc 2057
|| | |||||||||
Sbjct: 1315 atcacccatccttc 1302
Score = 42.1 bits (21), Expect = 0.16
Identities = 90/113 (79%)
Strand = Plus / Minus
Query: 1135 tgcatcttgaatccggtgagaatgtcttctgtcacagaaccgtagatccacccgatctca 1194
||||||||||| || || || || |||||||| |||||||| || ||||| || | |||
Sbjct: 2278 tgcatcttgaagcctgtcaggatatcttctgtaacagaaccataaatccatccaacctct 2219
Query: 1195 gttccccattcagtcttgtcctcatagccacagcttataacatggatagcttc 1247
| |||||||| || || || ||||| || || ||||||||||| || |||||
Sbjct: 2218 ttaccccattcggttttttcttcatacccgcaacttataacatgaatggcttc 2166
>gb|CN520281.1|CN520281 GQ0105.B3_A14 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0105_A14 5', mRNA sequence
Length = 783
Score = 85.7 bits (43), Expect = 1e-014
Identities = 109/131 (83%)
Strand = Plus / Minus
Query: 1759 aagcacatagcttccctgagagccttactgttgttaatgtagtgatcacaatcaagattc 1818
|||||||| ||||| || | |||||| ||||| || ||||| || |||||||| | ||||
Sbjct: 431 aagcacatggcttctcttacagccttgctgttattgatgtaatggtcacaatccaaattc 372
Query: 1819 aacatgtattgtccattggtaagcacagctgagacacgaacaagagcattcatggcacca 1878
||||| | || ||||||| ||||| |||||||| |||| |||||||||||||||||
Sbjct: 371 aacataaaaggtgcattggtgagcactgctgagactcgaatcagagcattcatggcacct 312
Query: 1879 gctttcttgtg 1889
|||||||||||
Sbjct: 311 gctttcttgtg 301
>gb|AF527387.1| Populus tremuloides xylem-specific cellulose synthase (CesA3) mRNA,
complete cds
Length = 3401
Score = 85.7 bits (43), Expect = 1e-014
Identities = 109/131 (83%)
Strand = Plus / Minus
Query: 1759 aagcacatagcttccctgagagccttactgttgttaatgtagtgatcacaatcaagattc 1818
|||||||| ||||| || | |||||| ||||| || ||||| || |||||||| | ||||
Sbjct: 1612 aagcacatggcttctcttacagccttgctgttattgatgtaatggtcacaatccaaattc 1553
Query: 1819 aacatgtattgtccattggtaagcacagctgagacacgaacaagagcattcatggcacca 1878
||||| | || ||||||| ||||| |||||||| |||| |||||||||||||||||
Sbjct: 1552 aacataaaaggtgcattggtgagcactgctgagactcgaatcagagcattcatggcacct 1493
Query: 1879 gctttcttgtg 1889
|||||||||||
Sbjct: 1492 gctttcttgtg 1482
Score = 79.8 bits (40), Expect = 7e-013
Identities = 133/164 (81%)
Strand = Plus / Minus
Query: 2101 actttgaattcttcatattctctcttcatggcccggcggtctttaacaaatgaagggtgc 2160
||||||||||||||||||||||| ||||| || | ||| || || ||||| || |||
Sbjct: 1270 actttgaattcttcatattctcttttcatagctctgcgctccttcacaaagttgggatgc 1211
Query: 2161 actttgtccttcaagtaatcaattttctgggagaagtaccattcaggagctctaggttca 2220
|||||||| |||||||| ||||| ||||| | |||||| | |||||||| || || |||
Sbjct: 1210 actttgtctttcaagtagtcaatcttctgagtgaagtagaactcaggagcccttggctca 1151
Query: 2221 atgttgtacttcttaacaaatggtacccattttctagcaaactc 2264
||||| | |||||| |||||| ||||| |||||||||||||
Sbjct: 1150 atgttatgcttcttgcaaaatggaacccaccttctagcaaactc 1107
Score = 61.9 bits (31), Expect = 2e-007
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 1984 acctgaatcattccaggatggtcccnggtattgtttcctggccatggtgtgccatcttgc 2043
|||||||||||||||||||| || | ||| ||||||| |||||||| || ||||| |||
Sbjct: 1387 acctgaatcattccaggatgatcacgggtgatgtttccaggccatggggtaccatcctgc 1328
Query: 2044 atgatccatccttc 2057
|| | |||||||||
Sbjct: 1327 atcacccatccttc 1314
Score = 42.1 bits (21), Expect = 0.16
Identities = 90/113 (79%)
Strand = Plus / Minus
Query: 1135 tgcatcttgaatccggtgagaatgtcttctgtcacagaaccgtagatccacccgatctca 1194
||||||||||| || || || || |||||||| |||||||| || ||||| || | |||
Sbjct: 2290 tgcatcttgaagcctgtcaggatatcttctgtaacagaaccataaatccatccaacctct 2231
Query: 1195 gttccccattcagtcttgtcctcatagccacagcttataacatggatagcttc 1247
| |||||||| || || || ||||| || || ||||||||||| || |||||
Sbjct: 2230 ttaccccattccgttttttcttcatacccgcaacttataacatgaatggcttc 2178
>gb|AY573571.1| Populus tremula x Populus tremuloides cellulose synthase (CesA1)
mRNA, complete cds
Length = 3472
Score = 85.7 bits (43), Expect = 1e-014
Identities = 109/131 (83%)
Strand = Plus / Minus
Query: 1759 aagcacatagcttccctgagagccttactgttgttaatgtagtgatcacaatcaagattc 1818
|||||||| ||||| || | |||||| ||||| || ||||| || |||||||| | ||||
Sbjct: 1684 aagcacatggcttctcttacagccttgctgttattgatgtaatggtcacaatccaaattc 1625
Query: 1819 aacatgtattgtccattggtaagcacagctgagacacgaacaagagcattcatggcacca 1878
||||| | || ||||||| ||||| |||||||| |||| |||||||||||||||||
Sbjct: 1624 aacataaaaggtgcattggtgagcactgctgagactcgaatcagagcattcatggcacct 1565
Query: 1879 gctttcttgtg 1889
|||||||||||
Sbjct: 1564 gctttcttgtg 1554
Score = 79.8 bits (40), Expect = 7e-013
Identities = 133/164 (81%)
Strand = Plus / Minus
Query: 2101 actttgaattcttcatattctctcttcatggcccggcggtctttaacaaatgaagggtgc 2160
||||||||||||||||||||||| ||||| || | ||| || || ||||| || |||
Sbjct: 1342 actttgaattcttcatattctcttttcatagctctgcgctccttcacaaagttgggatgc 1283
Query: 2161 actttgtccttcaagtaatcaattttctgggagaagtaccattcaggagctctaggttca 2220
|||||||| |||||||| ||||| ||||| | |||||| | |||||||| || || |||
Sbjct: 1282 actttgtctttcaagtagtcaatcttctgagtgaagtagaactcaggagcccttggctca 1223
Query: 2221 atgttgtacttcttaacaaatggtacccattttctagcaaactc 2264
||||| | |||||| |||||| ||||| |||||||||||||
Sbjct: 1222 atgttatgcttcttgcaaaatggaacccaccttctagcaaactc 1179
Score = 54.0 bits (27), Expect = 4e-005
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 1984 acctgaatcattccaggatggtcccnggtattgtttcctggccatggtgtgccatcttgc 2043
|||||||||||||||||||| || | || ||||||| |||||||| || ||||| |||
Sbjct: 1459 acctgaatcattccaggatgatcacgtgtgatgtttccaggccatggggtaccatcctgc 1400
Query: 2044 atgatccatccttc 2057
|| | |||||||||
Sbjct: 1399 atcacccatccttc 1386
Score = 42.1 bits (21), Expect = 0.16
Identities = 90/113 (79%)
Strand = Plus / Minus
Query: 1135 tgcatcttgaatccggtgagaatgtcttctgtcacagaaccgtagatccacccgatctca 1194
||||||||||| || || || || |||||||| |||||||| || ||||| || | |||
Sbjct: 2362 tgcatcttgaagcctgtcaggatatcttctgtaacagaaccataaatccatccaacctct 2303
Query: 1195 gttccccattcagtcttgtcctcatagccacagcttataacatggatagcttc 1247
| |||||||| || || || ||||| || || ||||||||||| || |||||
Sbjct: 2302 ttaccccattcggttttttcttcatacccgcaacttataacatgaatggcttc 2250
>gb|BU817734.1|BU817734 UA20CPD09 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 385
Score = 83.8 bits (42), Expect = 5e-014
Identities = 159/198 (80%)
Strand = Plus / Minus
Query: 303 ggtgaaggggtcgatgcgaacccacagcaaggagaagatggacgccagcaggatggccca 362
|||||||||||||||||| ||||||||||||||||| ||||| || || || || | |||
Sbjct: 343 ggtgaaggggtcgatgcgcacccacagcaaggagaaaatggaagcaaggagtatagacca 284
Query: 363 gacgacgacgatggtcggggtgcggttctgcctgcccatgaggcccttgaggaacgggta 422
||||| ||| || ||||| || || || || | |||| | ||||||||||| || ||
Sbjct: 283 gacgatgacaattgtcggtgtacgattttgtcgacccaacaaacccttgaggaaaggata 224
Query: 423 caggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactg 482
|| ||| | |||||||| | || |||| |||||||| ||||| || ||||| |||||
Sbjct: 223 caaatgggcaatgacccaaatagcatagaacagcttgccaaagagtggaccccatgactg 164
Query: 483 gtacccgctgttgatggc 500
|||||||||||| |||||
Sbjct: 163 gtacccgctgtttatggc 146
>gb|CV268371.1|CV268371 WS0205.B21_E18 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0205_E18 3', mRNA sequence
Length = 702
Score = 83.8 bits (42), Expect = 5e-014
Identities = 159/198 (80%)
Strand = Plus / Plus
Query: 303 ggtgaaggggtcgatgcgaacccacagcaaggagaagatggacgccagcaggatggccca 362
|||||||||||||||||| ||||| ||||||||||| ||||| || || || || | |||
Sbjct: 483 ggtgaaggggtcgatgcgcacccatagcaaggagaaaatggaagcaaggagtatagacca 542
Query: 363 gacgacgacgatggtcggggtgcggttctgcctgcccatgaggcccttgaggaacgggta 422
||| | |||||| || || || || || || | |||| | ||||||||||| || ||
Sbjct: 543 gacaatgacgattgttggtgtacgattttgtcgacccaacaaacccttgaggaaaggata 602
Query: 423 caggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactg 482
|| ||| | |||||||| | || ||||| |||||||| |||||||| ||||| |||||
Sbjct: 603 caaatgggcaatgacccaaatagcaaagaacagcttgccaaagagcggaccccatgactg 662
Query: 483 gtacccgctgttgatggc 500
|||||||||||| |||||
Sbjct: 663 gtacccgctgtttatggc 680
>gb|AY573574.1| Populus tremula x Populus tremuloides cellulose synthase (CesA3-2)
mRNA, complete cds
Length = 3358
Score = 81.8 bits (41), Expect = 2e-013
Identities = 178/224 (79%)
Strand = Plus / Minus
Query: 1975 ccaaggaaaacctgaatcattccaggatggtcccnggtattgtttcctggccatggtgtg 2034
|||||||| ||||||||||| ||||| || || | || || || || ||||| |||||
Sbjct: 1343 ccaaggaagacctgaatcatgccagggtgatcacgtgtgttattcccaggccaaggtgtt 1284
Query: 2035 ccatcttgcatgatccatccttcctcaggaactttctgtgccttagcaacaaggccattt 2094
||||||||||| |||||||||| ||||| |||||| ||||| || || ||| ||||
Sbjct: 1283 ccatcttgcatagtccatccttcttcaggtgttttctgagcctttgctaccagggcatta 1224
Query: 2095 accctaactttgaattcttcatattctctcttcatggcccggcggtctttaacaaatgaa 2154
|| | |||||| | |||||||| || || ||||| || | || ||||| || || |||
Sbjct: 1223 actcggactttgtactcttcataatcccttttcattgctctacgttctttcacgaaagaa 1164
Query: 2155 gggtgcactttgtccttcaagtaatcaattttctgggagaagta 2198
|| || || ||||| |||||||||||||||||||| ||||||||
Sbjct: 1163 ggctgaaccttgtctttcaagtaatcaattttctgtgagaagta 1120
Score = 75.8 bits (38), Expect = 1e-011
Identities = 227/290 (78%)
Strand = Plus / Minus
Query: 2284 tcaaatgtcagcatcgcagctccatcatcagatacatagcaagagaccttatccacaggg 2343
||||||| ||||| || || ||||||||||| || ||||| || || ||||| || ||
Sbjct: 1034 tcaaatgaaagcatagctgcaccatcatcagacacgtagcaggaaactttatcgacggga 975
Query: 2344 taatccacagcaagaatggatagcacggtattggcagtgacaagaggaggctccttcatt 2403
|| ||||||||||| ||||| || || ||||||||||||| | ||||| || |||| |
Sbjct: 974 tagtccacagcaaggatggaaaggactgtattggcagtgatcaatggagggtctttcagt 915
Query: 2404 gggtcgactgtactgacgaaaatgtcaacagcagccaactgagatggctcaccttcccgg 2463
|| || || ||||| ||||||| || ||| |||| | |||||| |||||||| || |
Sbjct: 914 ggatcaacagtactcacgaaaaaatccacaccagcaagctgagaaggctcaccctctctt 855
Query: 2464 tcataccttaatgccagcctatcaaggtacgtctcccggttgattggaaaccacttaggg 2523
||||||||| | |||||| || | ||||| || | |||| ||| |||||| |||
Sbjct: 854 tcataccttgcagacagcctttcgatatacgtttctctattgacaggattccacttgggg 795
Query: 2524 aactgatccaatatccacgaaagagcaaaccagatctcacatataacaga 2573
||||||||||| | ||| |||| |||||||||||||||||||| |||||
Sbjct: 794 aactgatccaacacccaagaaaatgcaaaccagatctcacatatgacaga 745
Score = 56.0 bits (28), Expect = 1e-005
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 1177 tagatccacccgatctcagttccccattcagtcttgtcctcatagccacagc 1228
|||||||| || ||||| |||||||||||||||| || |||||||||||||
Sbjct: 2138 tagatccaaccaatctcttttccccattcagtcttctcttcatagccacagc 2087
Score = 56.0 bits (28), Expect = 1e-005
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 1581 gttgaaaacacagccagttccgacataaactggtccttggatgccatc 1628
|||||||||||| |||||||| || || ||||||||||| ||||||||
Sbjct: 1737 gttgaaaacacaaccagttcctacgtatactggtccttgaatgccatc 1690
Score = 44.1 bits (22), Expect = 0.039
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 847 atgatgaactttccggtgagcagaca 872
|||||||| |||||||||||||||||
Sbjct: 2471 atgatgaattttccggtgagcagaca 2446
Score = 44.1 bits (22), Expect = 0.039
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 979 ccgtaccacagggggcagtgccggctgaagaggatctccacggacccaagagcccaccgg 1038
|||||||| ||||| ||||| | ||| |||| || ||||| || ||||||||||| |||
Sbjct: 2336 ccgtaccagaggggacagtgtctgctaaagaaaatttccacagaaccaagagcccatcgg 2277
Query: 1039 agcacctggt 1048
|| |||||||
Sbjct: 2276 aggacctggt 2267
>gb|CK097446.1|CK097446 UB51DPD11.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB51DPD11 3', mRNA sequence
Length = 481
Score = 79.8 bits (40), Expect = 7e-013
Identities = 163/204 (79%)
Strand = Plus / Plus
Query: 303 ggtgaaggggtcgatgcgaacccacagcaaggagaagatggacgccagcaggatggccca 362
|||||||||||||||||| ||||| ||||||||||| ||||| || || || || | |||
Sbjct: 227 ggtgaaggggtcgatgcgcacccatagcaaggagaaaatggaggcaaggagaatagacca 286
Query: 363 gacgacgacgatggtcggggtgcggttctgcctgcccatgaggcccttgaggaacgggta 422
||||| ||| || || || || || || |||| |||| | ||||||||||| || ||
Sbjct: 287 gacgatgacaattgttggcgtacgattttgccgacccagcaaacccttgaggaaaggata 346
Query: 423 caggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactg 482
|| ||| | |||||||| | || |||||||||||||| ||||| || ||||| |||||
Sbjct: 347 caaatgggcaatgacccaaatagcaaagaagagcttgccaaagagaggaccccatgactg 406
Query: 483 gtacccgctgttgatggcgtagga 506
||| || ||||| ||||| |||||
Sbjct: 407 gtatccactgtttatggcatagga 430
>gb|CK318831.1|CK318831 X9P03h01 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 727
Score = 79.8 bits (40), Expect = 7e-013
Identities = 133/164 (81%)
Strand = Plus / Minus
Query: 2101 actttgaattcttcatattctctcttcatggcccggcggtctttaacaaatgaagggtgc 2160
||||||||||||||||||||||| ||||| || | ||| || || ||||| || |||
Sbjct: 589 actttgaattcttcatattctcttttcatagctctgcgctccttcacaaagttgggatgc 530
Query: 2161 actttgtccttcaagtaatcaattttctgggagaagtaccattcaggagctctaggttca 2220
|||||||| |||||||| ||||| ||||| | |||||| | |||||||| || || |||
Sbjct: 529 actttgtctttcaagtagtcaatcttctgagtgaagtagaactcaggagcccttggctca 470
Query: 2221 atgttgtacttcttaacaaatggtacccattttctagcaaactc 2264
||||| | |||||| |||||| |||||| | |||||||||||
Sbjct: 469 atgttatgcttcttgcaaaatggaacccatctcctagcaaactc 426
>gb|CV252351.1|CV252351 PX0011.B21_G15 PT-X-FL-A-1 Populus trichocarpa cDNA clone
PX0011_G15 3', mRNA sequence
Length = 445
Score = 79.8 bits (40), Expect = 7e-013
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 409 ttgaggaacgggtacaggtggacgatgacccagaaggcgaagaagagcttgccgaagagc 468
|||||||||||||| || ||||| || ||||||||||| ||||||||||| ||||| ||
Sbjct: 315 ttgaggaacgggtaaagatggacaatcacccagaaggcaaagaagagcttcccgaataga 374
Query: 469 gggccccacgactggtaccc 488
|| ||||| |||||||||||
Sbjct: 375 ggtccccatgactggtaccc 394
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 414,466
Number of Sequences: 369679
Number of extensions: 414466
Number of successful extensions: 117581
Number of sequences better than 0.5: 149
Number of HSP's better than 0.5 without gapping: 147
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 117004
Number of HSP's gapped (non-prelim): 538
length of query: 3807
length of database: 203,408,664
effective HSP length: 20
effective length of query: 3787
effective length of database: 196,015,084
effective search space: 742309123108
effective search space used: 742309123108
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)