BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2907809.2.1
(614 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BI130272.1|BI130272 G103P22Y Populus cambium cDNA librar... 56 2e-006
gb|BI130315.1|BI130315 G103P75Y Populus cambium cDNA librar... 56 2e-006
gb|BU813569.1|BU813569 N012A05 Populus bark cDNA library Po... 56 2e-006
gb|BU833717.1|BU833717 T051F06 Populus apical shoot cDNA li... 56 2e-006
gb|BU890366.1|BU890366 P035G06 Populus petioles cDNA librar... 56 2e-006
gb|CF231116.1|CF231116 PtaC0017E5E0509 Poplar cDNA library ... 56 2e-006
gb|CN520082.1|CN520082 GQ0107.B3_A12 GQ010 Populus trichoca... 54 6e-006
gb|CN522763.1|CN522763 GQ0121.B3_A03 GQ012 Populus trichoca... 54 6e-006
gb|CV274388.1|CV274388 WS0173.B21_B18 PTxD-NR-A-8 Populus t... 54 6e-006
gb|BU898001.1|BU898001 X073C05 Populus wood cDNA library Po... 52 3e-005
gb|CV268998.1|CV268998 WS0207.B21_A21 PTxN-IB-N-A-11 Populu... 52 3e-005
gb|AI166137.1|AI166137 B008p30u Hybrid aspen plasmid librar... 48 4e-004
gb|BU827803.1|BU827803 K009P23P Populus apical shoot cDNA l... 48 4e-004
gb|BU863289.1|BU863289 S026C11 Populus imbibed seed cDNA li... 48 4e-004
gb|BU814054.1|BU814054 N024D09 Populus bark cDNA library Po... 46 0.002
gb|BU815949.1|BU815949 N058C02 Populus bark cDNA library Po... 46 0.002
gb|BU816913.1|BU816913 UA10BPG05 Populus tremula cambium cD... 46 0.002
gb|BU816993.1|BU816993 UA11BPF04 Populus tremula cambium cD... 46 0.002
gb|BU819546.1|BU819546 UA44BPG08 Populus tremula cambium cD... 46 0.002
gb|BU819827.1|BU819827 UA48BPB01 Populus tremula cambium cD... 46 0.002
gb|BU820005.1|BU820005 UA50BPB12 Populus tremula cambium cD... 46 0.002
gb|BU823749.1|BU823749 UB56BPB03 Populus tremula cambium cD... 46 0.002
gb|BU823953.1|BU823953 UB58DPE05 Populus tremula cambium cD... 46 0.002
gb|BU824175.1|BU824175 UB61BPC03 Populus tremula cambium cD... 46 0.002
gb|BU827530.1|BU827530 K004P32P Populus apical shoot cDNA l... 46 0.002
gb|BU830501.1|BU830501 T009B11 Populus apical shoot cDNA li... 46 0.002
gb|BU834650.1|BU834650 T064A08 Populus apical shoot cDNA li... 46 0.002
gb|BU836136.1|BU836136 T083B02 Populus apical shoot cDNA li... 46 0.002
gb|BU865752.1|BU865752 S058B02 Populus imbibed seed cDNA li... 46 0.002
gb|BU868948.1|BU868948 M124B05 Populus flower cDNA library ... 46 0.002
gb|BU869720.1|BU869720 Q003G04 Populus flower cDNA library ... 46 0.002
gb|BU886840.1|BU886840 R051C01 Populus root cDNA library Po... 46 0.002
gb|BU892882.1|BU892882 P070F07 Populus petioles cDNA librar... 46 0.002
gb|BU893284.1|BU893284 P075G02 Populus petioles cDNA librar... 46 0.002
gb|BU895911.1|BU895911 X032H05 Populus wood cDNA library Po... 46 0.002
gb|CA821637.1|CA821637 RSH05E03 two-month-old roots from cl... 46 0.002
gb|CA821725.1|CA821725 RSH06F04 two-month-old roots from cl... 46 0.002
gb|CA823454.1|CA823454 R26D09 two-month-old roots from clon... 46 0.002
gb|CF227363.1|CF227363 PtaD2G11G1113 Poplar cDNA library fr... 46 0.002
gb|CF231313.1|CF231313 PtaC0019H7H0715 Poplar cDNA library ... 46 0.002
gb|CK097685.1|CK097685 UB58DPE05.3pR Populus active cambium... 46 0.002
gb|CK097770.1|CK097770 UB61BPC03.3pR Populus active cambium... 46 0.002
gb|CK107465.1|CK107465 UB58DPE05.5pR Populus active cambium... 46 0.002
gb|CK107549.1|CK107549 UB61BPC03.5pR Populus active cambium... 46 0.002
gb|CK317726.1|CK317726 B9P01a08 Populus stem seasonal libra... 46 0.002
gb|CK317983.1|CK317983 B9P04b02 Populus stem seasonal libra... 46 0.002
gb|CK318727.1|CK318727 X9P02f11 Populus stem seasonal libra... 46 0.002
gb|AJ768649.1|AJ768649 AJ768649 Populus euphratica leaf adu... 46 0.002
gb|AJ774612.1|AJ774612 AJ774612 Populus euphratica shoot 3-... 46 0.002
gb|AJ778430.1|AJ778430 AJ778430 Populus euphratica cambium ... 46 0.002
gb|AJ779165.1|AJ779165 AJ779165 Populus euphratica cambium ... 46 0.002
gb|CV225692.1|CV225692 WS0162.B21_C03 PT-DX-A-7 Populus tri... 46 0.002
gb|CV226899.1|CV226899 WS0165.B21_J20 PT-DX-A-7 Populus tri... 46 0.002
gb|CV228753.1|CV228753 WS01911.B21_C03 PT-DX-N-A-10 Populus... 46 0.002
gb|CV244009.1|CV244009 WS0253.B21_H14 PT-MB-N-A-15 Populus ... 46 0.002
gb|CV246770.1|CV246770 WS01111.B21_N24 PT-P-FL-A-2 Populus ... 46 0.002
gb|CV259471.1|CV259471 WS02011.B21_H05 PTxN-IB-N-A-11 Popul... 46 0.002
gb|CV260877.1|CV260877 WS02015.B21_E01 PTxN-IB-N-A-11 Popul... 46 0.002
gb|CV266852.1|CV266852 WS02030.B21_C11 PTxN-IB-N-A-11 Popul... 46 0.002
gb|CV269464.1|CV269464 WS0208.B21_F07 PTxN-IB-N-A-11 Populu... 46 0.002
gb|CV278527.1|CV278527 WS0146.B21_K06 PTxD-IL-A-5 Populus t... 46 0.002
gb|CX168178.1|CX168178 F09_69-96_11.ab1 leaf inoculated wit... 46 0.002
gb|CX172828.1|CX172828 D02_69-86_08.ab1 leaf inoculated wit... 46 0.002
gb|CX172859.1|CX172859 C03_69-64_05.ab1 leaf inoculated wit... 46 0.002
gb|CX173588.1|CX173588 F12_69-27_12.ab1 leaf inoculated wit... 46 0.002
gb|CX175742.1|CX175742 D09_69-33_07.ab1 leaf inoculated wit... 46 0.002
gb|CX178237.1|CX178237 E02_45-32_10.ab1 leaf inoculated wit... 46 0.002
gb|CX182920.1|CX182920 A09_45-32_01.ab1 leaf inoculated wit... 46 0.002
gb|CX183882.1|CX183882 E12_45-14_10.ab1 leaf inoculated wit... 46 0.002
gb|CX184933.1|CX184933 B07_45-71_03.ab1 leaf inoculated wit... 46 0.002
gb|CX185765.1|CX185765 H11_45-73_15.ab1 leaf inoculated wit... 46 0.002
gb|CX186873.1|CX186873 A01_45-49_01.ab1 leaf inoculated wit... 46 0.002
gb|CX170445.1|CX170445 C08_69-68_06.ab1 leaf inoculated wit... 46 0.002
gb|CX656135.1|CX656135 PO02047D08 Poplar SC cDNA library Po... 46 0.002
gb|CX656995.1|CX656995 PO02029F08 Poplar SC cDNA library Po... 46 0.002
gb|DT470240.1|DT470240 WS01920.C21_E14 PT-DX-N-A-10 Populus... 46 0.002
gb|DT522517.1|DT522517 WS02037.B21_D08 PTxN-IB-N-A-11 Popul... 46 0.002
gb|CF229021.1|CF229021 PtaXM0020B9B0903 Poplar cDNA library... 44 0.006
gb|CF229919.1|CF229919 PtaC0001E3E0309 Poplar cDNA library ... 44 0.006
gb|CF231568.1|CF231568 PtaC0023A2A0202 Poplar cDNA library ... 44 0.006
gb|CF232941.1|CF232941 PtaJXO0017E7E0709 Poplar cDNA librar... 44 0.006
gb|CF235076.1|CF235076 PtaJXT0018F12F1212 Poplar cDNA libra... 44 0.006
gb|DN488285.1|DN488285 R046F05.3pR Populus root cDNA librar... 44 0.006
gb|DT481814.1|DT481814 WS02533.BR_A07 PT-MB-N-A-15 Populus ... 44 0.006
gb|DT487189.1|DT487189 WS02533.B21_A07 PT-MB-N-A-15 Populus... 44 0.006
gb|DT509371.1|DT509371 WS02423.BR_I19 PTxD-ICC-N-A-14 Popul... 44 0.006
gb|DT513985.1|DT513985 WS02423.B21_I19 PTxD-ICC-N-A-14 Popu... 44 0.006
gb|BU833211.1|BU833211 T043F07 Populus apical shoot cDNA li... 42 0.024
gb|CK319498.1|CK319498 X9P11d12 Populus stem seasonal libra... 42 0.024
gb|AJ770904.1|AJ770904 AJ770904 Populus euphratica shoot in... 42 0.024
gb|CV225502.1|CV225502 WS0161.B21_J12 PT-DX-A-7 Populus tri... 42 0.024
gb|CV263573.1|CV263573 WS02022.B21_D12 PTxN-IB-N-A-11 Popul... 42 0.024
gb|BI135541.1|BI135541 F054P36Y Populus flower cDNA library... 40 0.096
gb|BI135700.1|BI135700 F057P20Y Populus flower cDNA library... 40 0.096
gb|BI135963.1|BI135963 F061P16Y Populus flower cDNA library... 40 0.096
gb|BI135976.1|BI135976 F061P33Y Populus flower cDNA library... 40 0.096
gb|BI137387.1|BI137387 F085P40Y Populus flower cDNA library... 40 0.096
gb|BI137418.1|BI137418 F085P81Y Populus flower cDNA library... 40 0.096
gb|BI137761.1|BI137761 F093P11Y Populus flower cDNA library... 40 0.096
gb|BI137826.1|BI137826 F094P10Y Populus flower cDNA library... 40 0.096
gb|BU872999.1|BU872999 Q050A09 Populus flower cDNA library ... 40 0.096
gb|BU881239.1|BU881239 UM60TC09 Populus flower cDNA library... 40 0.096
gb|CB239843.1|CB239843 RSH17E07 two-month-old roots from cl... 40 0.096
gb|CF229121.1|CF229121 PtaXM0021E1E0109 Poplar cDNA library... 40 0.096
gb|CK091358.1|CK091358 F085P40.3pR Populus flower cDNA libr... 40 0.096
gb|AJ770925.1|AJ770925 AJ770925 Populus euphratica leaf 3-6... 40 0.096
gb|AJ780240.1|AJ780240 AJ780240 Populus euphratica root 3-6... 40 0.096
gb|CV235555.1|CV235555 WS0122.B21_J15 PT-GT-FL-A-3 Populus ... 40 0.096
gb|CV241561.1|CV241561 WS02512.B21_J02 PT-MB-N-A-15 Populus... 40 0.096
gb|CV241602.1|CV241602 WS02512.B21_L02 PT-MB-N-A-15 Populus... 40 0.096
gb|CV246233.1|CV246233 WS0111.B21_L13 PT-P-FL-A-2 Populus t... 40 0.096
gb|CV246433.1|CV246433 WS01110.B21_H12 PT-P-FL-A-2 Populus ... 40 0.096
gb|CV246494.1|CV246494 WS01110.B21_L17 PT-P-FL-A-2 Populus ... 40 0.096
gb|CV246935.1|CV246935 WS01116.B21_H17 PT-P-FL-A-2 Populus ... 40 0.096
gb|CV247516.1|CV247516 WS01118.B21_G23 PT-P-FL-A-2 Populus ... 40 0.096
gb|CV247654.1|CV247654 WS01118.B21_O04 PT-P-FL-A-2 Populus ... 40 0.096
gb|CV251812.1|CV251812 WS0118.B21_D07 PT-P-FL-A-2 Populus t... 40 0.096
gb|CV252203.1|CV252203 WS0119.B21_N23 PT-P-FL-A-2 Populus t... 40 0.096
gb|CV267229.1|CV267229 WS02031.B21_C23 PTxN-IB-N-A-11 Popul... 40 0.096
gb|CV267638.1|CV267638 WS02032.B21_E18 PTxN-IB-N-A-11 Popul... 40 0.096
gb|CV273980.1|CV273980 WS01712.B21_N02 PTxD-NR-A-8 Populus ... 40 0.096
gb|DT471950.1|DT471950 WS0122.BR_J15 PT-GT-FL-A-3 Populus t... 40 0.096
gb|DT493557.1|DT493557 WS0111.BR_L13 PT-P-FL-A-2 Populus tr... 40 0.096
gb|DT493796.1|DT493796 WS01116.BR_H17 PT-P-FL-A-2 Populus t... 40 0.096
gb|DT494440.1|DT494440 WS01118.BR.1_G23 PT-P-FL-A-2 Populus... 40 0.096
gb|DT494596.1|DT494596 WS01118.BR.1_O04 PT-P-FL-A-2 Populus... 40 0.096
gb|DT497615.1|DT497615 WS01126.BR_P20 PT-P-FL-A-2 Populus t... 40 0.096
gb|DT498363.1|DT498363 WS0115.BR_C08 PT-P-FL-A-2 Populus tr... 40 0.096
gb|DT499400.1|DT499400 WS0118.BR_D07 PT-P-FL-A-2 Populus tr... 40 0.096
gb|DV466625.1|DV466625 MTUNUL1.P8.B07 NUL Populus fremontii... 40 0.096
gb|BI135535.1|BI135535 F054P23Y Populus flower cDNA library... 38 0.38
gb|BU835912.1|BU835912 T080C01 Populus apical shoot cDNA li... 38 0.38
gb|CX176405.1|CX176405 G04_69-72_14.ab1 leaf inoculated wit... 38 0.38
gb|CX183705.1|CX183705 F11_45-93_11.ab1 leaf inoculated wit... 38 0.38
>gb|BI130272.1|BI130272 G103P22Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 455
Score = 56.0 bits (28), Expect = 2e-006
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccacc 273
|||||||| |||||| |||||||||||| | ||||||||||| ||||| ||||||||
Sbjct: 309 aacaagaaagccatgtcgatccagtgcaaggtgtgcatgcagacattcatttgcaccaca 250
Query: 274 tccgaggccaagtgca 289
|| |||| |||||||
Sbjct: 249 tcggaggtgaagtgca 234
Score = 40.1 bits (20), Expect = 0.096
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaac 171
||||| || ||||||| |||||| | |||||||| ||||||||||||
Sbjct: 402 atgggaggaggcaacgggcagaaggcaaagatggctcgcgagaggaac 355
>gb|BI130315.1|BI130315 G103P75Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 474
Score = 56.0 bits (28), Expect = 2e-006
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccacc 273
|||||||| |||||| |||||||||||| | ||||||||||| ||||| ||||||||
Sbjct: 331 aacaagaaagccatgtcgatccagtgcaaggtgtgcatgcagacattcatttgcaccaca 272
Query: 274 tccgaggccaagtgca 289
|| |||| |||||||
Sbjct: 271 tcggaggtgaagtgca 256
Score = 40.1 bits (20), Expect = 0.096
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaac 171
||||| || ||||||| |||||| | |||||||| ||||||||||||
Sbjct: 424 atgggaggaggcaacgggcagaaggcaaagatggctcgcgagaggaac 377
>gb|BU813569.1|BU813569 N012A05 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 516
Score = 56.0 bits (28), Expect = 2e-006
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccacc 273
|||||||| |||||| |||||||||||| | ||||||||||| ||||| ||||||||
Sbjct: 198 aacaagaaagccatgtcgatccagtgcaaggtgtgcatgcagacattcatttgcaccaca 257
Query: 274 tccgaggccaagtgca 289
|| |||| |||||||
Sbjct: 258 tcggaggtgaagtgca 273
Score = 40.1 bits (20), Expect = 0.096
Identities = 41/48 (85%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaac 171
||||| || ||||||| |||||| | |||||||| ||||||||||||
Sbjct: 105 atgggaggaggcaacgggcagaaggcaaagatggctcgcgagaggaac 152
>gb|BU833717.1|BU833717 T051F06 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 507
Score = 56.0 bits (28), Expect = 2e-006
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccacc 273
|||||||| |||||| |||||||||||| | ||||||||||| ||||| ||||||||
Sbjct: 178 aacaagaaagccatgtcgatccagtgcaaggtgtgcatgcagacattcatttgcaccaca 237
Query: 274 tccgaggccaagtgca 289
|| |||| |||||||
Sbjct: 238 tcggaggtgaagtgca 253
Score = 40.1 bits (20), Expect = 0.096
Identities = 41/48 (85%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaac 171
||||| || ||||||| |||||| | |||||||| ||||||||||||
Sbjct: 85 atgggaggaggcaacgggcagaaggcaaagatggctcgcgagaggaac 132
>gb|BU890366.1|BU890366 P035G06 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 483
Score = 56.0 bits (28), Expect = 2e-006
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccacc 273
|||||||| |||||| |||||||||||| | ||||||||||| ||||| ||||||||
Sbjct: 180 aacaagaaagccatgtcgatccagtgcaaggtgtgcatgcagacattcatttgcaccacg 239
Query: 274 tccgaggccaagtgca 289
|| |||| |||||||
Sbjct: 240 tcggaggtgaagtgca 255
Score = 38.2 bits (19), Expect = 0.38
Identities = 34/39 (87%)
Strand = Plus / Plus
Query: 133 ggcaacgcccagaagtccaagatggcgcgcgagaggaac 171
||||||| |||||| | |||||||| ||||||||||||
Sbjct: 96 ggcaacgggcagaaggcaaagatggctcgcgagaggaac 134
>gb|CF231116.1|CF231116 PtaC0017E5E0509 Poplar cDNA library from cambial zone Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 395
Score = 56.0 bits (28), Expect = 2e-006
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccacc 273
|||||||| |||||| |||||||||||| | || |||||||| ||||||||||||||
Sbjct: 73 aacaagaaagccatgtcgatccagtgcaaggtgtgtatgcagacattcatctgcaccaca 132
Query: 274 tccgaggccaagtgca 289
|| |||| |||||||
Sbjct: 133 tcggaggtgaagtgca 148
>gb|CN520082.1|CN520082 GQ0107.B3_A12 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0107_A12 5', mRNA sequence
Length = 522
Score = 54.0 bits (27), Expect = 6e-006
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccac 272
|||||||| |||||| |||||||||||| | ||||||||||| ||||| ||||||||
Sbjct: 199 aacaagaaagccatgtcgatccagtgcaaggtgtgcatgcagacattcatttgcaccac 257
>gb|CN522763.1|CN522763 GQ0121.B3_A03 GQ012 Populus trichocarpa x Populus deltoides cDNA
clone GQ0121_A03 5', mRNA sequence
Length = 328
Score = 54.0 bits (27), Expect = 6e-006
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccac 272
|||||||| |||||| |||||||||||| | ||||||||||| ||||| ||||||||
Sbjct: 172 aacaagaaagccatgtcgatccagtgcaaggtgtgcatgcagacattcatttgcaccac 230
>gb|CV274388.1|CV274388 WS0173.B21_B18 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0173_B18 3', mRNA sequence
Length = 520
Score = 54.0 bits (27), Expect = 6e-006
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccac 272
|||||||| |||||| |||||||||||| | ||||||||||| ||||| ||||||||
Sbjct: 328 aacaagaaagccatgtcgatccagtgcaaggtgtgcatgcagacattcatttgcaccac 270
>gb|BU898001.1|BU898001 X073C05 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 244
Score = 52.0 bits (26), Expect = 3e-005
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcacca 271
|||||||| |||||| |||||||||||| | ||||||||||| ||||| |||||||
Sbjct: 187 aacaagaaagccatgtcgatccagtgcaaggtgtgcatgcagacattcatttgcacca 244
>gb|CV268998.1|CV268998 WS0207.B21_A21 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0207_A21 3', mRNA sequence
Length = 541
Score = 52.0 bits (26), Expect = 3e-005
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 199 agccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatgcagacc 258
|||||||| ||| | |||||||| || ||| |||||||||||| | |||||||||||
Sbjct: 328 agccagcttgagtctaacaagaaagctatgtctatccagtgcaaggtgtgcatgcagaca 269
Query: 259 ttcatctgcaccac 272
||||| ||||||||
Sbjct: 268 ttcatatgcaccac 255
>gb|AI166137.1|AI166137 B008p30u Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 378
Score = 48.1 bits (24), Expect = 4e-004
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccacc 273
|||||||| |||||| |||||||||||| | || |||||||| ||||| ||||||||
Sbjct: 107 aacaagaaagccatgtcgatccagtgcaaggtgtgtatgcagacattcatttgcaccaca 166
Query: 274 tccgaggccaagtgca 289
|| |||| |||||||
Sbjct: 167 tcggaggtgaagtgca 182
>gb|BU827803.1|BU827803 K009P23P Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 421
Score = 48.1 bits (24), Expect = 4e-004
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccacc 273
|||||||| |||||| |||||||||||| | || |||||||| ||||| ||||||||
Sbjct: 150 aacaagaaagccatgtcgatccagtgcaaggtgtgtatgcagacattcatttgcaccaca 209
Query: 274 tccgaggccaagtgca 289
|| |||| |||||||
Sbjct: 210 tcggaggtgaagtgca 225
Score = 40.1 bits (20), Expect = 0.096
Identities = 41/48 (85%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaac 171
||||| || ||||||| |||||| | |||||||| ||||||||||||
Sbjct: 57 atgggaggaggcaacgggcagaaggcaaagatggctcgcgagaggaac 104
>gb|BU863289.1|BU863289 S026C11 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 447
Score = 48.1 bits (24), Expect = 4e-004
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccacc 273
|||||||| |||||| |||||||||||| | || |||||||| ||||| ||||||||
Sbjct: 185 aacaagaaagccatgtcgatccagtgcaaggtgtgtatgcagacattcatttgcaccaca 244
Query: 274 tccgaggccaagtgca 289
|| |||| |||||||
Sbjct: 245 tcggaggtgaagtgca 260
Score = 40.1 bits (20), Expect = 0.096
Identities = 41/48 (85%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaac 171
||||| || ||||||| |||||| | |||||||| ||||||||||||
Sbjct: 92 atgggaggaggcaacgggcagaaggcaaagatggctcgcgagaggaac 139
>gb|BU814054.1|BU814054 N024D09 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 479
Score = 46.1 bits (23), Expect = 0.002
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccac 272
|||||||| |||||| |||||||||||| | || |||||||| ||||| ||||||||
Sbjct: 156 aacaagaaagccatgtcgatccagtgcaaggtgtgtatgcagacattcatttgcaccac 214
>gb|BU815949.1|BU815949 N058C02 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 544
Score = 46.1 bits (23), Expect = 0.002
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccac 272
|||||||| |||||| |||||||||||| | || |||||||| ||||| ||||||||
Sbjct: 220 aacaagaaagccatgtcgatccagtgcaaggtgtgtatgcagacattcatttgcaccac 278
>gb|BU816913.1|BU816913 UA10BPG05 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 389
Score = 46.1 bits (23), Expect = 0.002
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccac 272
|||||||| |||||| |||||||||||| | || |||||||| ||||| ||||||||
Sbjct: 227 aacaagaaagccatgtcgatccagtgcaaggtgtgtatgcagacattcatttgcaccac 285
>gb|BU816993.1|BU816993 UA11BPF04 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 396
Score = 46.1 bits (23), Expect = 0.002
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccac 272
|||||||| |||||| |||||||||||| | || |||||||| ||||| ||||||||
Sbjct: 241 aacaagaaagccatgtcgatccagtgcaaggtgtgtatgcagacattcatttgcaccac 299
>gb|BU819546.1|BU819546 UA44BPG08 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 482
Score = 46.1 bits (23), Expect = 0.002
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccac 272
|||||||| |||||| |||||||||||| | || |||||||| ||||| ||||||||
Sbjct: 168 aacaagaaagccatgtcgatccagtgcaaggtgtgtatgcagacattcatttgcaccac 226
>gb|BU819827.1|BU819827 UA48BPB01 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 557
Score = 46.1 bits (23), Expect = 0.002
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccac 272
|||||||| |||||| |||||||||||| | || |||||||| ||||| ||||||||
Sbjct: 246 aacaagaaagccatgtcgatccagtgcaaggtgtgtatgcagacattcatttgcaccac 304
>gb|BU820005.1|BU820005 UA50BPB12 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 472
Score = 46.1 bits (23), Expect = 0.002
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccac 272
|||||||| |||||| |||||||||||| | || |||||||| ||||| ||||||||
Sbjct: 164 aacaagaaagccatgtcgatccagtgcaaggtgtgtatgcagacattcatttgcaccac 222
>gb|BU823749.1|BU823749 UB56BPB03 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 365
Score = 46.1 bits (23), Expect = 0.002
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 211 gccaacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcacc 270
||||||||||| |||||| |||||||||||| | || ||||| || ||||| ||||||
Sbjct: 184 gccaacaagaaagccatgtcgatccagtgcaaggtgtgtatgcaaacattcatttgcacc 243
Query: 271 acctccgaggccaagtgca 289
|| || |||| |||||||
Sbjct: 244 acatcggaggtgaagtgca 262
>gb|BU823953.1|BU823953 UB58DPE05 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 508
Score = 46.1 bits (23), Expect = 0.002
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccac 272
|||||||| |||||| |||||||||||| | || |||||||| ||||| ||||||||
Sbjct: 180 aacaagaaagccatgtcgatccagtgcaaggtgtgtatgcagacattcatttgcaccac 238
>gb|BU824175.1|BU824175 UB61BPC03 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 488
Score = 46.1 bits (23), Expect = 0.002
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccac 272
|||||||| |||||| |||||||||||| | || |||||||| ||||| ||||||||
Sbjct: 169 aacaagaaagccatgtcgatccagtgcaaggtgtgtatgcagacattcatttgcaccac 227
>gb|BU827530.1|BU827530 K004P32P Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 492
Score = 46.1 bits (23), Expect = 0.002
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccac 272
|||||||| |||||| |||||||||||| | || |||||||| ||||| ||||||||
Sbjct: 240 aacaagaaagccatgtcgatccagtgcaaggtgtgtatgcagacattcatttgcaccac 298
>gb|BU830501.1|BU830501 T009B11 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 371
Score = 46.1 bits (23), Expect = 0.002
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccac 272
|||||||| |||||| |||||||||||| | || |||||||| ||||| ||||||||
Sbjct: 241 aacaagaaagccatgtcgatccagtgcaaggtgtgtatgcagacattcatttgcaccac 299
>gb|BU834650.1|BU834650 T064A08 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 514
Score = 46.1 bits (23), Expect = 0.002
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccac 272
|||||||| |||||| |||||||||||| | || |||||||| ||||| ||||||||
Sbjct: 265 aacaagaaagccatgtcgatccagtgcaaggtgtgtatgcagacattcatttgcaccac 323
>gb|BU836136.1|BU836136 T083B02 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 515
Score = 46.1 bits (23), Expect = 0.002
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccac 272
|||||||| |||||| |||||||||||| | || |||||||| ||||| ||||||||
Sbjct: 184 aacaagaaagccatgtcgatccagtgcaaggtgtgtatgcagacattcatttgcaccac 242
>gb|BU865752.1|BU865752 S058B02 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 374
Score = 46.1 bits (23), Expect = 0.002
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccac 272
|||||||| |||||| |||||||||||| | || |||||||| ||||| ||||||||
Sbjct: 244 aacaagaaagccatgtcgatccagtgcaaggtgtgtatgcagacattcatttgcaccac 302
>gb|BU868948.1|BU868948 M124B05 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 517
Score = 46.1 bits (23), Expect = 0.002
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccac 272
|||||||| |||||| |||||||||||| | || |||||||| ||||| ||||||||
Sbjct: 185 aacaagaaagccatgtcgatccagtgcaaggtgtgtatgcagacattcatttgcaccac 243
>gb|BU869720.1|BU869720 Q003G04 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 418
Score = 46.1 bits (23), Expect = 0.002
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccac 272
|||||||| |||||| |||||||||||| | || |||||||| ||||| ||||||||
Sbjct: 103 aacaagaaagccatgtcgatccagtgcaaggtgtgtatgcagacattcatttgcaccac 161
>gb|BU886840.1|BU886840 R051C01 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 432
Score = 46.1 bits (23), Expect = 0.002
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccac 272
|||||||| |||||| |||||||||||| | || |||||||| ||||| ||||||||
Sbjct: 233 aacaagaaagccatgtcgatccagtgcaaggtgtgtatgcagacattcatttgcaccac 291
>gb|BU892882.1|BU892882 P070F07 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 565
Score = 46.1 bits (23), Expect = 0.002
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccac 272
|||||||| |||||| |||||||||||| | || |||||||| ||||| ||||||||
Sbjct: 242 aacaagaaagccatgtcgatccagtgcaaggtgtgtatgcagacattcatttgcaccac 300
>gb|BU893284.1|BU893284 P075G02 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 691
Score = 46.1 bits (23), Expect = 0.002
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccac 272
|||||||| |||||| |||||||||||| | || |||||||| ||||| ||||||||
Sbjct: 245 aacaagaaagccatgtcgatccagtgcaaggtgtgtatgcagacattcatttgcaccac 303
>gb|BU895911.1|BU895911 X032H05 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 583
Score = 46.1 bits (23), Expect = 0.002
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccac 272
|||||||| |||||| |||||||||||| | || |||||||| ||||| ||||||||
Sbjct: 248 aacaagaaagccatgtcgatccagtgcaaggtgtgtatgcagacattcatttgcaccac 306
>gb|CA821637.1|CA821637 RSH05E03 two-month-old roots from clone 'Beaupre' grown for 19 days
under restricted irrigation Populus trichocarpa x
Populus deltoides cDNA 5', mRNA sequence
Length = 590
Score = 46.1 bits (23), Expect = 0.002
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccac 272
|||||||| |||||| |||||||||||| | || |||||||| ||||| ||||||||
Sbjct: 171 aacaagaaagccatgtcgatccagtgcaaggtgtgtatgcagacattcatttgcaccac 229
Score = 40.1 bits (20), Expect = 0.096
Identities = 41/48 (85%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaac 171
||||| || ||||||| |||||| | |||||||| ||||||||||||
Sbjct: 78 atgggaggaggcaacgggcagaaggcgaagatggctcgcgagaggaac 125
>gb|CA821725.1|CA821725 RSH06F04 two-month-old roots from clone 'Beaupre' grown for 19 days
under restricted irrigation Populus trichocarpa x
Populus deltoides cDNA 5', mRNA sequence
Length = 537
Score = 46.1 bits (23), Expect = 0.002
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccac 272
|||||||| |||||| |||||||||||| | || |||||||| ||||| ||||||||
Sbjct: 171 aacaagaaagccatgtcgatccagtgcaaggtgtgtatgcagacattcatttgcaccac 229
Score = 40.1 bits (20), Expect = 0.096
Identities = 41/48 (85%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaac 171
||||| || ||||||| |||||| | |||||||| ||||||||||||
Sbjct: 78 atgggaggaggcaacgggcagaaggcgaagatggctcgcgagaggaac 125
>gb|CA823454.1|CA823454 R26D09 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 584
Score = 46.1 bits (23), Expect = 0.002
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccac 272
|||||||| |||||| |||||||||||| | || |||||||| ||||| ||||||||
Sbjct: 231 aacaagaaagccatgtcgatccagtgcaaggtgtgtatgcagacattcatttgcaccac 289
Score = 40.1 bits (20), Expect = 0.096
Identities = 41/48 (85%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaac 171
||||| || ||||||| |||||| | |||||||| ||||||||||||
Sbjct: 138 atgggaggaggcaacgggcagaaggcgaagatggctcgcgagaggaac 185
>gb|CF227363.1|CF227363 PtaD2G11G1113 Poplar cDNA library from wood tissues Populus alba x
Populus tremula cDNA 5', mRNA sequence
Length = 564
Score = 46.1 bits (23), Expect = 0.002
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccac 272
|||||||| |||||| |||||||||||| | || |||||||| ||||| ||||||||
Sbjct: 248 aacaagaaagccatgtcgatccagtgcaaggtgtgtatgcagacattcatttgcaccac 306
>gb|CF231313.1|CF231313 PtaC0019H7H0715 Poplar cDNA library from cambial zone Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 555
Score = 46.1 bits (23), Expect = 0.002
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccac 272
|||||||| |||||| |||||||||||| | || |||||||| ||||| ||||||||
Sbjct: 246 aacaagaaagccatgtcgatccagtgcaaggtgtgtatgcagacattcatttgcaccac 304
>gb|CK097685.1|CK097685 UB58DPE05.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB58DPE05 3', mRNA sequence
Length = 480
Score = 46.1 bits (23), Expect = 0.002
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccac 272
|||||||| |||||| |||||||||||| | || |||||||| ||||| ||||||||
Sbjct: 300 aacaagaaagccatgtcgatccagtgcaaggtgtgtatgcagacattcatttgcaccac 242
>gb|CK097770.1|CK097770 UB61BPC03.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB61BPC03 3', mRNA sequence
Length = 450
Score = 46.1 bits (23), Expect = 0.002
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccac 272
|||||||| |||||| |||||||||||| | || |||||||| ||||| ||||||||
Sbjct: 280 aacaagaaagccatgtcgatccagtgcaaggtgtgtatgcagacattcatttgcaccac 222
>gb|CK107465.1|CK107465 UB58DPE05.5pR Populus active cambium cDNA library Populus tremula
cDNA clone UB58DPE05 5', mRNA sequence
Length = 468
Score = 46.1 bits (23), Expect = 0.002
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccac 272
|||||||| |||||| |||||||||||| | || |||||||| ||||| ||||||||
Sbjct: 147 aacaagaaagccatgtcgatccagtgcaaggtgtgtatgcagacattcatttgcaccac 205
>gb|CK107549.1|CK107549 UB61BPC03.5pR Populus active cambium cDNA library Populus tremula
cDNA clone UB61BPC03 5', mRNA sequence
Length = 500
Score = 46.1 bits (23), Expect = 0.002
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccac 272
|||||||| |||||| |||||||||||| | || |||||||| ||||| ||||||||
Sbjct: 182 aacaagaaagccatgtcgatccagtgcaaggtgtgtatgcagacattcatttgcaccac 240
>gb|CK317726.1|CK317726 B9P01a08 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 568
Score = 46.1 bits (23), Expect = 0.002
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccac 272
|||||||| |||||| |||||||||||| | || |||||||| ||||| ||||||||
Sbjct: 245 aacaagaaagccatgtcgatccagtgcaaggtgtgtatgcagacattcatttgcaccac 303
>gb|CK317983.1|CK317983 B9P04b02 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 482
Score = 46.1 bits (23), Expect = 0.002
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccac 272
|||||||| |||||| |||||||||||| | || |||||||| ||||| ||||||||
Sbjct: 179 aacaagaaagccatgtcgatccagtgcaaggtgtgtatgcagacattcatttgcaccac 237
Score = 38.2 bits (19), Expect = 0.38
Identities = 34/39 (87%)
Strand = Plus / Plus
Query: 133 ggcaacgcccagaagtccaagatggcgcgcgagaggaac 171
||||||| |||||| | |||||||| ||||||||||||
Sbjct: 95 ggcaacgggcagaaggcgaagatggctcgcgagaggaac 133
>gb|CK318727.1|CK318727 X9P02f11 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 586
Score = 46.1 bits (23), Expect = 0.002
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccac 272
|||||||| |||||| |||||||||||| | || |||||||| ||||| ||||||||
Sbjct: 266 aacaagaaagccatgtcgatccagtgcaaggtgtgtatgcagacattcatttgcaccac 324
>gb|AJ768649.1|AJ768649 AJ768649 Populus euphratica leaf adult Populus euphratica cDNA
clone P0000100020C02F1, mRNA sequence
Length = 541
Score = 46.1 bits (23), Expect = 0.002
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccac 272
|||||||| |||||| |||||||||||| | || |||||||| ||||| ||||||||
Sbjct: 145 aacaagaaagccatgtcgatccagtgcaaggtgtgtatgcagacattcatttgcaccac 203
>gb|AJ774612.1|AJ774612 AJ774612 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300022D02F1, mRNA sequence
Length = 494
Score = 46.1 bits (23), Expect = 0.002
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccac 272
|||||||| |||||| |||||||||||| | || |||||||| ||||| ||||||||
Sbjct: 170 aacaagaaagccatgtcgatccagtgcaaggtgtgtatgcagacattcatttgcaccac 228
Score = 40.1 bits (20), Expect = 0.096
Identities = 41/48 (85%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaac 171
||||| || ||||||| |||||| | |||||||| ||||||||||||
Sbjct: 77 atgggaggaggcaacgggcagaaggcaaagatggctcgcgagaggaac 124
>gb|AJ778430.1|AJ778430 AJ778430 Populus euphratica cambium 3-6 months Populus euphratica
cDNA clone P0000500004D08F1, mRNA sequence
Length = 579
Score = 46.1 bits (23), Expect = 0.002
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 214 aacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcaccac 272
|||||||| |||||| |||||||||||| | || |||||||| ||||| ||||||||
Sbjct: 145 aacaagaaagccatgtcgatccagtgcaaggtgtgtatgcagacattcatttgcaccac 203
Score = 38.2 bits (19), Expect = 0.38
Identities = 34/39 (87%)
Strand = Plus / Plus
Query: 133 ggcaacgcccagaagtccaagatggcgcgcgagaggaac 171
||||||| |||||| | |||||||| ||||||||||||
Sbjct: 61 ggcaacgggcagaaggcaaagatggctcgcgagaggaac 99
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 63,979
Number of Sequences: 369679
Number of extensions: 63979
Number of successful extensions: 19525
Number of sequences better than 0.5: 134
Number of HSP's better than 0.5 without gapping: 134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 19261
Number of HSP's gapped (non-prelim): 264
length of query: 614
length of database: 203,408,664
effective HSP length: 19
effective length of query: 595
effective length of database: 196,384,763
effective search space: 116848933985
effective search space used: 116848933985
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)