BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2750995.2.1
(729 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU892955.1|BU892955 P071E09 Populus petioles cDNA librar... 214 4e-054
gb|BU888050.1|BU888050 P003A06 Populus petioles cDNA librar... 206 9e-052
gb|BU892916.1|BU892916 P071C07 Populus petioles cDNA librar... 206 9e-052
gb|BU892926.1|BU892926 P071A03 Populus petioles cDNA librar... 198 2e-049
gb|CK112980.1|CK112980 UR100TC03 Populus root cDNA library ... 192 1e-047
gb|CF232446.1|CF232446 PtaJXO0010F10C0305 Poplar cDNA libra... 190 5e-047
gb|CF234181.1|CF234181 PtaJXO3E11E1109 Poplar cDNA library ... 190 5e-047
gb|AJ778354.1|AJ778354 AJ778354 Populus euphratica cambium ... 190 5e-047
gb|AF053973.1| Populus tremula x Populus tremuloides UDP-gl... 190 5e-047
gb|CF233418.1|CF233418 PtaJXO0023B3B0303 Poplar cDNA librar... 184 3e-045
gb|BP927819.1|BP927819 BP927819 full-length enriched poplar... 184 3e-045
gb|BI128239.1|BI128239 G073P06Y Populus cambium cDNA librar... 182 1e-044
gb|AY466400.1| Populus tomentosa UDP-glucose dehydrogenase ... 182 1e-044
gb|AI166913.1|AI166913 xylem.est.699 Poplar xylem Lambda ZA... 176 8e-043
gb|BI128641.1|BI128641 G079P39Y Populus cambium cDNA librar... 176 8e-043
gb|BU888742.1|BU888742 P011H10 Populus petioles cDNA librar... 176 8e-043
gb|CA931102.1|CA931102 MTU2TA.P2.B05 Aspen apex cDNA Librar... 168 2e-040
gb|AJ775321.1|AJ775321 AJ775321 Populus euphratica shoot 3-... 168 2e-040
gb|BU812502.1|BU812502 UL97TB03 Populus leaf cDNA library P... 163 1e-038
gb|CV131432.1|CV131432 L2P06d12 Populus stem seasonal libra... 163 1e-038
gb|CA825241.1|CA825241 R55G08 two-month-old roots from clon... 161 5e-038
gb|BU820219.1|BU820219 UA52DPF01 Populus tremula cambium cD... 157 7e-037
gb|BU879221.1|BU879221 V057D11 Populus flower cDNA library ... 155 3e-036
gb|CN518001.1|CN518001 GQ0094.B3_E20 GQ009 Populus trichoca... 155 3e-036
gb|BI128346.1|BI128346 G074P53Y Populus cambium cDNA librar... 153 1e-035
gb|CK102314.1|CK102314 G073P06.5pR Populus tension wood cDN... 151 4e-035
gb|BP926489.1|BP926489 BP926489 full-length enriched poplar... 149 2e-034
gb|BP929570.1|BP929570 BP929570 full-length enriched poplar... 149 2e-034
gb|BI130825.1|BI130825 G111P32Y Populus cambium cDNA librar... 147 7e-034
gb|BU812794.1|BU812794 N001D09 Populus bark cDNA library Po... 139 2e-031
gb|BU893543.1|BU893543 P079C03 Populus petioles cDNA librar... 139 2e-031
gb|CF119756.1|CF119756 MTU10CS.P5.H11 Aspen stem cDNA Libra... 139 2e-031
gb|DN493679.1|DN493679 G103P78.5pR Populus tension wood cDN... 139 2e-031
gb|CX657991.1|CX657991 PO01007H07 Poplar SC cDNA library Po... 135 3e-030
gb|CN193344.1|CN193344 PtdH844 hybrid poplar systemically w... 131 4e-029
gb|CN193184.1|CN193184 PtdH606 hybrid poplar systemically w... 123 1e-026
gb|BU821117.1|BU821117 UB19CPD04 Populus tremula cambium cD... 117 6e-025
gb|AI161480.1|AI161480 A001P44U Hybrid aspen plasmid librar... 111 4e-023
gb|BU880723.1|BU880723 UM53TH09 Populus flower cDNA library... 111 4e-023
gb|BU878936.1|BU878936 V053F09 Populus flower cDNA library ... 100 1e-019
gb|BP925307.1|BP925307 BP925307 full-length enriched poplar... 96 2e-018
gb|BI127315.1|BI127315 G058P56Y Populus cambium cDNA librar... 84 9e-015
gb|CK107867.1|CK107867 G058P56 Populus tension wood cDNA li... 84 9e-015
gb|BU875482.1|BU875482 V007F08 Populus flower cDNA library ... 80 1e-013
gb|AI162135.1|AI162135 A012P58U Hybrid aspen plasmid librar... 78 5e-013
gb|CA933828.1|CA933828 MTU3TS.P13.C03 Aspen stem cDNA Libra... 76 2e-012
gb|CA934089.1|CA934089 MTU3TS.P2.G02 Aspen stem cDNA Librar... 76 2e-012
gb|CF119122.1|CF119122 MTU10CS.P13.G08 Aspen stem cDNA Libr... 76 2e-012
gb|CF119514.1|CF119514 MTU10CS.P2.H01 Aspen stem cDNA Libra... 76 2e-012
gb|BU877082.1|BU877082 V029E04 Populus flower cDNA library ... 70 1e-010
gb|CA933951.1|CA933951 MTU3TS.P14.G09 Aspen stem cDNA Libra... 68 5e-010
gb|CN192795.1|CN192795 PtdH1662 hybrid poplar systemically ... 68 5e-010
gb|CA934153.1|CA934153 MTU3TS.P3.G05 Aspen stem cDNA Librar... 66 2e-009
gb|BU820376.1|BU820376 UA54DPE06 Populus tremula cambium cD... 64 8e-009
gb|CA927501.1|CA927501 MTU6CR.P9.G11 Aspen root cDNA Librar... 64 8e-009
gb|CA932491.1|CA932491 MTU5CS.P13.F10 Aspen stem cDNA Libra... 64 8e-009
gb|CF119510.1|CF119510 MTU10CS.P2.G08 Aspen stem cDNA Libra... 64 8e-009
gb|CA927153.1|CA927153 MTU6CR.P5.F05 Aspen root cDNA Librar... 62 3e-008
gb|CF119125.1|CF119125 MTU10CS.P13.G12 Aspen stem cDNA Libr... 62 3e-008
gb|CA934483.1|CA934483 MTU3TS.P8.C05 Aspen stem cDNA Librar... 60 1e-007
gb|CA933856.1|CA933856 MTU3TS.P13.E11 Aspen stem cDNA Libra... 58 5e-007
gb|AJ774273.1|AJ774273 AJ774273 Populus euphratica shoot 3-... 58 5e-007
gb|CK116458.1|CK116458 B012P21 Hybrid aspen plasmid library... 50 1e-004
gb|CK109203.1|CK109203 K045P05 Populus apical shoot cDNA li... 48 5e-004
gb|BP926633.1|BP926633 BP926633 full-length enriched poplar... 46 0.002
>gb|BU892955.1|BU892955 P071E09 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 555
Score = 214 bits (108), Expect = 4e-054
Identities = 348/428 (81%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
|||||||||||||| ||||| || || || ||||| ||||| || || ||||||||||||
Sbjct: 86 atggtgaagatctgttgcattggagcagggtatgtaggtgggcctacaatggctgtcatt 145
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctccaagccccgcattgag 320
|| ||||||||||| || |||||||| || |||||||||||||| | || | ||||
Sbjct: 146 gcactcaagtgcccggatattgaggtggtggttgttgacatctctgaacctaggattgca 205
Query: 321 gcctggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcag 380
||||||||||| ||| ||||| ||||| ||||| ||||| |||||||| |||||||||
Sbjct: 206 gcctggaacagtgaccagctccccatctatgagccaggccttgatgatgtggtgaagcag 265
Query: 381 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctgac 440
|||| |||| |||| ||||||||||||| ||||| |||||||| || || ||||||||
Sbjct: 266 cgcagaggcaagaacatcttcttcagcaccgatgtggagaagcatgttgcagaggctgat 325
Query: 441 atcatcttcgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggct 500
|| | || || || || |||||||| || || || | || ||||||||||| || |||
Sbjct: 326 atagtttttgtttcagtcaacaccccaactaaaactcagggtcttggagctggtaaagct 385
Query: 501 gccgacctcacctactgggagagcgctgctcgtatgatcgccgatgtctccaagtctgac 560
|| || || || ||||||||||| ||||| |||| ||| || || || ||||| ||||||
Sbjct: 386 gcagatctgacgtactgggagagtgctgcacgtacgattgctgacgtgtccaaatctgac 445
Query: 561 aagatcgttgtcgagaagtccaccgtccctgtcaagaccgctgaggctattgagaagatc 620
|| || ||||| ||||| || || ||||| || ||||| |||||||||||||| |||||
Sbjct: 446 aaaatagttgttgagaaatcaacagtcccagttaagactgctgaggctattgaaaagatt 505
Query: 621 ttgaccca 628
||||||||
Sbjct: 506 ttgaccca 513
>gb|BU888050.1|BU888050 P003A06 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 645
Score = 206 bits (104), Expect = 9e-052
Identities = 347/428 (81%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
|||||||||||||| ||||| || || || ||||| ||||| || || ||||||||||||
Sbjct: 105 atggtgaagatctgttgcattggagcagggtatgtaggtgggcctacaatggctgtcatt 164
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctccaagccccgcattgag 320
|| ||||||||||| || |||||||| || |||||||||||||| | || | ||||
Sbjct: 165 gcactcaagtgcccggatattgaggtggtggttgttgacatctctgaacctaggattgca 224
Query: 321 gcctggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcag 380
||||||||||| ||| ||||| ||||| ||||| ||||| |||||||| |||||||||
Sbjct: 225 gcctggaacagtgaccagctccccatctatgagccaggccttgatgatgtggtgaagcag 284
Query: 381 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctgac 440
|||| |||| |||| ||||||||||||| ||||| |||||||| || || ||||||||
Sbjct: 285 cgcagaggcaagaacatcttcttcagcaccgatgtggagaagcatgttgcagaggctgat 344
Query: 441 atcatcttcgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggct 500
|| | || || || || |||||||| || || || | || ||||||||||| || | |
Sbjct: 345 atagtttttgtttcagtcaacaccccaactaaaactcagggtcttggagctggtaaagtt 404
Query: 501 gccgacctcacctactgggagagcgctgctcgtatgatcgccgatgtctccaagtctgac 560
|| || || || ||||||||||| ||||| |||| ||| || || || ||||| ||||||
Sbjct: 405 gcagatctgacatactgggagagtgctgcacgtacgattgctgacgtgtccaaatctgac 464
Query: 561 aagatcgttgtcgagaagtccaccgtccctgtcaagaccgctgaggctattgagaagatc 620
|| || ||||| ||||| || || ||||| || ||||| |||||||||||||| |||||
Sbjct: 465 aaaatagttgttgagaaatcaacagtcccagttaagactgctgaggctattgaaaagatt 524
Query: 621 ttgaccca 628
||||||||
Sbjct: 525 ttgaccca 532
>gb|BU892916.1|BU892916 P071C07 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 717
Score = 206 bits (104), Expect = 9e-052
Identities = 369/458 (80%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
|||||||||||||| ||||| || || || ||||||||||| || || |||||||||||
Sbjct: 95 atggtgaagatctgttgcattggagcagggtatgtcggtgggcctacaatggctgtcatc 154
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctccaagccccgcattgag 320
|| ||||||||||| ||||| || || ||||||||||||| | || | ||||
Sbjct: 155 gcactcaagtgcccgtcaattgaagtggtggttgttgacatctgggaacctaggattgca 214
Query: 321 gcctggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcag 380
||||||||||| ||| ||||| ||||| ||||| ||||| ||||||| |||||| ||
Sbjct: 215 gcctggaacagtgaccagctccccatctatgagccaggcctgtatgatgtggtgaaggag 274
Query: 381 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctgac 440
||| | |||||||||||||||||||||| || || |||||||| ||||||||||||||
Sbjct: 275 tgccgaggcaggaacctcttcttcagcaaagacgtggagaagcatgtcgctgaggctgat 334
Query: 441 atcatcttcgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggct 500
|| | || || ||||| |||||||| ||||| || | || |||||||||||||| |||
Sbjct: 335 atagtttttgtttcggtcaacacccctaccaaaactcaaggtcttggagctggcaaagct 394
Query: 501 gccgacctcacctactgggagagcgctgctcgtatgatcgccgatgtctccaagtctgac 560
|| || || || |||||||||||||| || || | || || ||||| ||||| ||||||
Sbjct: 395 gcagatctgacgtactgggagagcgcagcacgcacaattgctgatgtgtccaaatctgac 454
Query: 561 aagatcgttgtcgagaagtccaccgtccctgtcaagaccgctgaggctattgagaagatc 620
|| |||||||| ||||| || || ||||| || || || || ||||| ||||| ||||||
Sbjct: 455 aaaatcgttgttgagaaatcaacagtcccagttaaaactgccgaggcaattgaaaagatc 514
Query: 621 ttgacccacnncagcaagggcatcaactaccagatcct 658
||||||||| ||| ||||| ||||| | |||||||||
Sbjct: 515 ttgacccacaacagtaaggggatcaaattccagatcct 552
>gb|BU892926.1|BU892926 P071A03 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 622
Score = 198 bits (100), Expect = 2e-049
Identities = 368/458 (80%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
|||||||||||||| ||||| || || || ||||||||||| || || |||||||||||
Sbjct: 83 atggtgaagatctgttgcattggagcagggtatgtcggtgggcctacaatggctgtcatc 142
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctccaagccccgcattgag 320
|| ||||||||||| ||||| || || ||||||||||||| | || | ||||
Sbjct: 143 gcactcaagtgcccgtcaattgaagtggtggttgttgacatctgggaacctaggattgca 202
Query: 321 gcctggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcag 380
||||||||||| ||| ||||| ||||| ||||| ||||| ||||||| |||||| ||
Sbjct: 203 gcctggaacagtgaccagctccccatctatgagccaggcctgtatgatgtggtgaaggag 262
Query: 381 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctgac 440
||| | |||||||| ||||||||||||| || || |||||||| ||||||||||||||
Sbjct: 263 tgccgaggcaggaatctcttcttcagcaaagacgtggagaagcatgtcgctgaggctgat 322
Query: 441 atcatcttcgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggct 500
|| | || || ||||| |||||||| ||||| || | || |||||||||||||| |||
Sbjct: 323 atagtttttgtttcggtcaacacccctaccaaaactcaaggtcttggagctggcaaagct 382
Query: 501 gccgacctcacctactgggagagcgctgctcgtatgatcgccgatgtctccaagtctgac 560
|| || || || |||||||||||||| || || | || || ||||| ||||| ||||||
Sbjct: 383 gcagatctgacgtactgggagagcgcagcacgcacaattgctgatgtgtccaaatctgac 442
Query: 561 aagatcgttgtcgagaagtccaccgtccctgtcaagaccgctgaggctattgagaagatc 620
|| |||||||| ||||| || || ||||| || || || || ||||| ||||| ||||||
Sbjct: 443 aaaatcgttgttgagaaatcaacagtcccagttaaaactgccgaggcaattgaaaagatc 502
Query: 621 ttgacccacnncagcaagggcatcaactaccagatcct 658
||||||||| ||| ||||| ||||| | |||||||||
Sbjct: 503 ttgacccacaacagtaaggggatcaaattccagatcct 540
>gb|CK112980.1|CK112980 UR100TC03 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone UR100TC03 5', mRNA sequence
Length = 626
Score = 192 bits (97), Expect = 1e-047
Identities = 367/458 (80%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
|||||||||||||| ||||| || || || ||||||||||| || || |||||||||||
Sbjct: 101 atggtgaagatctgttgcattggagcagggtatgtcggtgggcctacaatggctgtcatc 160
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctccaagccccgcattgag 320
|| ||||||||||| | ||||| || || ||||||||||||| | || | ||||
Sbjct: 161 gcactcaagtgcccggcaattgaagtggtggttgttgacatctgggaacctaggattgca 220
Query: 321 gcctggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcag 380
||||||||||| ||| ||||| ||||| ||||| ||||| ||||||| |||||| ||
Sbjct: 221 gcctggaacagtgaccagctccccatctatgagccaggcctgtatgatgtggtgaaggag 280
Query: 381 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctgac 440
||| | |||||||| ||||||||||||| || || |||||||| |||||||||||||
Sbjct: 281 tgccgaggcaggaatctcttcttcagcaaagacgtggagaagcatatcgctgaggctgat 340
Query: 441 atcatcttcgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggct 500
|| | || || ||||| |||||||| ||||| || | || |||||||||||||| |||
Sbjct: 341 atagtttttgtttcggtcaacacccctaccaaaactcaaggtcttggagctggcaaagct 400
Query: 501 gccgacctcacctactgggagagcgctgctcgtatgatcgccgatgtctccaagtctgac 560
|| || || || |||||||||||||| || || | || || || || ||||| ||||||
Sbjct: 401 gcagatctgacgtactgggagagcgcagcacgcacaattgctgacgtgtccaaatctgac 460
Query: 561 aagatcgttgtcgagaagtccaccgtccctgtcaagaccgctgaggctattgagaagatc 620
|| |||||||| ||||| || || ||||| || || || || ||||| ||||| ||||||
Sbjct: 461 aaaatcgttgttgagaaatcaacagtcccagttaaaactgccgaggcaattgaaaagatc 520
Query: 621 ttgacccacnncagcaagggcatcaactaccagatcct 658
||||||||| ||| ||||| ||||| | |||||||||
Sbjct: 521 ttgacccacaacagtaaggggatcaaatnccagatcct 558
>gb|CF232446.1|CF232446 PtaJXO0010F10C0305 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 770
Score = 190 bits (96), Expect = 5e-047
Identities = 368/458 (80%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
|||||||||||||| ||||| || || || |||||||| || || || |||||||||||
Sbjct: 94 atggtgaagatctgttgcattggagcagggtatgtcggcgggcctacaatggctgtcatc 153
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctccaagccccgcattgag 320
|| ||||||||||| ||||| || || ||||||||||||| | || | ||||
Sbjct: 154 gcactcaagtgcccgtcaattgaagtggtggttgttgacatctgggaacctaggattgca 213
Query: 321 gcctggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcag 380
||||||||||| ||| ||||| ||||| ||||| ||||| ||||||| |||||| ||
Sbjct: 214 gcctggaacagtgaccagctccccatctatgagccaggcctgtatgatgtggtgaaggag 273
Query: 381 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctgac 440
||| | |||||||| ||||||||||||| || || |||||||| ||||||||||||||
Sbjct: 274 tgccgaggcaggaatctcttcttcagcaaagacgtggagaagcatgtcgctgaggctgat 333
Query: 441 atcatcttcgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggct 500
|| | || || ||||| |||||||| ||||| || | || |||||||||||||| |||
Sbjct: 334 atagtttttgtttcggtcaacacccctaccaaaactcaaggtcttggagctggcaaagct 393
Query: 501 gccgacctcacctactgggagagcgctgctcgtatgatcgccgatgtctccaagtctgac 560
|| || || || |||||||||||||| || || | || || ||||| ||||| ||||||
Sbjct: 394 gcagatctgacgtactgggagagcgcagcacgcacaattgctgatgtgtccaaatctgac 453
Query: 561 aagatcgttgtcgagaagtccaccgtccctgtcaagaccgctgaggctattgagaagatc 620
|| |||||||| ||||| || || ||||| || || || || ||||| ||||| ||||||
Sbjct: 454 aaaatcgttgttgagaaatcaacagtcccagttaaaactgccgaggcaattgaaaagatc 513
Query: 621 ttgacccacnncagcaagggcatcaactaccagatcct 658
|||||||||| ||| ||||| ||||| | |||||||||
Sbjct: 514 ttgacccacnacagtaaggggatcaaattccagatcct 551
>gb|CF234181.1|CF234181 PtaJXO3E11E1109 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 685
Score = 190 bits (96), Expect = 5e-047
Identities = 367/458 (80%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
|||||||||||||| ||||| || || || |||||||| || || || |||||||||||
Sbjct: 76 atggtgaagatctgttgcattggagcagggtatgtcggcgggcctacaatggctgtcatc 135
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctccaagccccgcattgag 320
|| ||||||||||| ||||| || || ||||||||||||| | || | ||||
Sbjct: 136 gcactcaagtgcccgtcaattgaagtggtggttgttgacatctgggaacctaggattgca 195
Query: 321 gcctggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcag 380
||||||||||| ||| ||||| ||||| ||||| ||||| ||||||| |||||| ||
Sbjct: 196 gcctggaacagtgaccagctccccatctatgagccaggcctgtatgatgtggtgaaggag 255
Query: 381 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctgac 440
||| | |||||||| ||||||||||||| || || |||||||| ||||||||||||||
Sbjct: 256 tgccgaggcaggaatctcttcttcagcaaagacgtggagaagcatgtcgctgaggctgat 315
Query: 441 atcatcttcgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggct 500
|| | || || ||||| |||||||| ||||| || | || |||||||||||||| |||
Sbjct: 316 atagtttttgtttcggtcaacacccctaccaaaactcaaggtcttggagctggcaaagct 375
Query: 501 gccgacctcacctactgggagagcgctgctcgtatgatcgccgatgtctccaagtctgac 560
|| || || || |||||||||||||| || || | || || ||||| ||||| ||||||
Sbjct: 376 gcagatctgacgtactgggagagcgcagcacgcacaattgctgatgtgtccaaatctgac 435
Query: 561 aagatcgttgtcgagaagtccaccgtccctgtcaagaccgctgaggctattgagaagatc 620
|| |||||||| ||||| || || ||||| || || || || ||||| ||||| ||||||
Sbjct: 436 aaaatcgttgttgagaaatcaacagtcccagttaaaactgccgaggcaattgaaaagatc 495
Query: 621 ttgacccacnncagcaagggcatcaactaccagatcct 658
||||||||| ||| ||||| ||||| | |||||||||
Sbjct: 496 ttgacccacaacagtaaggggatcaaattccagatcct 533
>gb|AJ778354.1|AJ778354 AJ778354 Populus euphratica cambium 3-6 months Populus euphratica
cDNA clone P0000500002G09F1, mRNA sequence
Length = 703
Score = 190 bits (96), Expect = 5e-047
Identities = 367/458 (80%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
|||||||||||||| ||||| || || || ||||||||||| || || |||||||||||
Sbjct: 70 atggtgaagatctgttgcattggagcagggtatgtcggtgggcctacaatggctgtcatc 129
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctccaagccccgcattgag 320
|| ||||||||||| ||||| || || ||||||||||||| | || | ||||
Sbjct: 130 gcactcaagtgcccgtcaattgaagtggtggttgttgacatctgggaacctaggattgca 189
Query: 321 gcctggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcag 380
||||||||||| ||| ||||| ||||| ||||| ||||| ||||||| |||||| ||
Sbjct: 190 gcctggaacagtgaccagctccccatctatgagccaggcctgtatgatgtggtgaaggag 249
Query: 381 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctgac 440
||| | |||||||| ||||||||||||| ||||| |||||||| ||||||||||||||
Sbjct: 250 tgccgaggcaggaatctcttcttcagcaaagatgtggagaagcatgtcgctgaggctgat 309
Query: 441 atcatcttcgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggct 500
|| | || || |||| |||||||| ||||| || | || |||||||||||||| |||
Sbjct: 310 atagtttttgtttcggccaacacccctaccaaaactcaaggtcttggagctggcaaagct 369
Query: 501 gccgacctcacctactgggagagcgctgctcgtatgatcgccgatgtctccaagtctgac 560
|| || || || |||||||||||||| || || | || || ||||| ||||| ||||||
Sbjct: 370 gcagatctgacgtactgggagagcgcagcacgcacaattgctgatgtgtccaaatctgac 429
Query: 561 aagatcgttgtcgagaagtccaccgtccctgtcaagaccgctgaggctattgagaagatc 620
|| |||||||| ||||| || || ||||| || || || || ||||| ||||| ||||||
Sbjct: 430 aaaatcgttgttgagaaatcaacagtcccagttaaaactgccgaggcaattgaaaagatc 489
Query: 621 ttgacccacnncagcaagggcatcaactaccagatcct 658
||||| ||| ||| ||||| ||||| | |||||||||
Sbjct: 490 ttgacacacaacagtaaggggatcaaattccagatcct 527
>gb|AF053973.1| Populus tremula x Populus tremuloides UDP-glucose dehydrogenase
gene (ugdh), complete cds
Length = 1824
Score = 190 bits (96), Expect = 5e-047
Identities = 367/458 (80%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
|||||||||||||| ||||| || || || ||||||||||| || || |||||||||||
Sbjct: 78 atggtgaagatctgttgcattggagcagggtatgtcggtgggcctacaatggctgtcatc 137
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctccaagccccgcattgag 320
|| ||||||||||| ||||| || || ||||||||||||| | || | ||||
Sbjct: 138 gcactcaagtgcccgtcaattgaagtggtggttgttgacatctgggaacctaggattgca 197
Query: 321 gcctggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcag 380
||||||||||| ||| ||||| ||||| ||||| ||||| ||||||| |||||| ||
Sbjct: 198 gcctggaacagtgaccagctccccatctatgagccaggcctgtatgatgtggtgaaggag 257
Query: 381 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctgac 440
||| | |||||||| ||||||||||||| || || |||||||| ||||||||||||||
Sbjct: 258 tgccgaggcaggaatctcttcttcagcaaagacgtggagaagcatgtcgctgaggctgat 317
Query: 441 atcatcttcgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggct 500
|| | || || ||||| |||||||| ||||| || | || |||||||||||||| |||
Sbjct: 318 atagtttttgtttcggtcaacacccctaccaaaactcaaggtcttggagctggcaaagct 377
Query: 501 gccgacctcacctactgggagagcgctgctcgtatgatcgccgatgtctccaagtctgac 560
|| || || || |||||||||||||| || || | || || ||||| ||||| ||||||
Sbjct: 378 gcagatctgacgtactgggagagcgcagcacgcacaattgctgatgtgtccaaatctgac 437
Query: 561 aagatcgttgtcgagaagtccaccgtccctgtcaagaccgctgaggctattgagaagatc 620
|| |||||||| ||||| || || ||||| || || || || ||||| ||||| ||||||
Sbjct: 438 aaaatcgttgttgagaaatcaacagtcccagttaaaactgccgaggcaattgaaaagatc 497
Query: 621 ttgacccacnncagcaagggcatcaactaccagatcct 658
|||||||| ||| ||||| ||||| | |||||||||
Sbjct: 498 ctgacccacaacagtaaggggatcaaattccagatcct 535
>gb|CF233418.1|CF233418 PtaJXO0023B3B0303 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 772
Score = 184 bits (93), Expect = 3e-045
Identities = 367/459 (79%), Gaps = 1/459 (0%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
|||||||||||||| ||||| || || || ||||||||||| || || |||||||||||
Sbjct: 102 atggtgaagatctgttgcattggagcagggtatgtcggtgggcctacaatggctgtcatc 161
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctcca-agccccgcattga 319
|| ||||||||||| ||||| || || |||||||||||| | || | ||||
Sbjct: 162 gcactcaagtgcccgtcaattgaagtggttgttgttgacatcnanntancctaggattgc 221
Query: 320 ggcctggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagca 379
||||||||||| ||| ||||| ||||| ||||| ||||| ||||||| |||||| |
Sbjct: 222 agcctggaacagtgaccagctccccatctatgagccaggcctgtatgatgtggtgaagga 281
Query: 380 gtgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctga 439
|||| | |||||||| ||||||||||||| || || |||||||| ||||||||||||||
Sbjct: 282 gtgccgaggcaggaatctcttcttcagcaaagacgtggagaagcatgtcgctgaggctga 341
Query: 440 catcatcttcgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggc 499
|| | || || ||||| |||||||| ||||| || | || |||||||||||||| ||
Sbjct: 342 tatagtttttgtttcggtcaacacccctaccaaaactcaaggtcttggagctggcaaagc 401
Query: 500 tgccgacctcacctactgggagagcgctgctcgtatgatcgccgatgtctccaagtctga 559
||| || || || |||||||||||||| || || | || || ||||| ||||| |||||
Sbjct: 402 tgcagatctgacgtactgggagagcgcagcacgcacaattgctgatgtgtccaaatctga 461
Query: 560 caagatcgttgtcgagaagtccaccgtccctgtcaagaccgctgaggctattgagaagat 619
||| |||||||| ||||| || || ||||| || || || || ||||| ||||| |||||
Sbjct: 462 caaaatcgttgttgagaaatcaacagtcccagttaaaactgccgaggcaattgaaaagat 521
Query: 620 cttgacccacnncagcaagggcatcaactaccagatcct 658
|||||||||| ||| ||||| ||||| | |||||||||
Sbjct: 522 cttgacccacaacagtaaggggatcaaattccagatcct 560
>gb|BP927819.1|BP927819 BP927819 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-076_D16.f 5', mRNA sequence
Length = 526
Score = 184 bits (93), Expect = 3e-045
Identities = 342/425 (80%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
|||||||||||||| ||||| || || || ||||||||||| || || |||||||||||
Sbjct: 102 atggtgaagatctgttgcattggagcagggtatgtcggtgggcctacaatggctgtcatc 161
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctccaagccccgcattgag 320
|| ||||||||||| ||||| || || ||||||||||||| | || | ||||
Sbjct: 162 gcactcaagtgcccgtcaattgaagtggtggttgttgacatctgggaacctaggattgca 221
Query: 321 gcctggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcag 380
||||||||||| ||| ||||| ||||| ||||| ||||| ||||||| |||||| ||
Sbjct: 222 gcctggaacagtgaccagctccccatctatgagccaggcctgtatgatgtggtgaaggag 281
Query: 381 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctgac 440
||| | |||||||| ||||||||||||| || || |||||||| ||||||||||||||
Sbjct: 282 tgccgaggcaggaatctcttcttcagcaaagacgtggagaagcatgtcgctgaggctgat 341
Query: 441 atcatcttcgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggct 500
|| | || || ||||| |||||||| ||||| || | || |||||||||||||| |||
Sbjct: 342 atagtttttgtttcggtcaacacccctaccaaaactcaaggtcttggagctggcaaagct 401
Query: 501 gccgacctcacctactgggagagcgctgctcgtatgatcgccgatgtctccaagtctgac 560
|| || || || |||||||||||||| || || | || || ||||| ||||| ||||||
Sbjct: 402 gcagatctgacgtactgggagagcgcagcacgcacaattgctgatgtgtccaaatctgac 461
Query: 561 aagatcgttgtcgagaagtccaccgtccctgtcaagaccgctgaggctattgagaagatc 620
|| |||||||| ||||| || || ||||| || || || || ||||| ||||||||||||
Sbjct: 462 aaaatcgttgttgagaaatcaacagtcccagttaaaactgccgaggcaattgagaagatc 521
Query: 621 ttgac 625
|||||
Sbjct: 522 ttgac 526
>gb|BI128239.1|BI128239 G073P06Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 456
Score = 182 bits (92), Expect = 1e-044
Identities = 326/404 (80%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
|||||||||||||| ||||| || || || ||||| ||||| || || ||||||||||||
Sbjct: 53 atggtgaagatctgttgcattggagcagggtatgtaggtgggcctacaatggctgtcatt 112
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctccaagccccgcattgag 320
|| ||||||||||| || |||||||| || |||||||||||||| | || | ||||
Sbjct: 113 gcactcaagtgcccggatattgaggtggtggttgttgacatctctgaacctaggattgca 172
Query: 321 gcctggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcag 380
||||||||||| ||| ||||| ||||| ||||| ||||| |||||||| |||||||||
Sbjct: 173 gcctggaacagtgaccagctccccatctatgagccaggccttgatgatgtggtgaagcag 232
Query: 381 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctgac 440
|||| |||| |||| ||||||||||||| ||||| |||||||| || || ||||||||
Sbjct: 233 cgcagaggcaagaacatcttcttcagcaccgatgtggagaagcatgttgcagaggctgat 292
Query: 441 atcatcttcgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggct 500
|| | || || || || |||||||| || || || | || ||||||||||| || |||
Sbjct: 293 atagtttttgtttcagtcaacaccccaactaaaactcagggtcttggagctggtaaagct 352
Query: 501 gccgacctcacctactgggagagcgctgctcgtatgatcgccgatgtctccaagtctgac 560
|| || || || ||||||||||| ||||| |||| ||| || || || ||||| ||||||
Sbjct: 353 gcagatctgacatactgggagagtgctgcacgtacgattgctgacgtgtccaaatctgac 412
Query: 561 aagatcgttgtcgagaagtccaccgtccctgtcaagaccgctga 604
|| || ||||| ||||| || || ||||| || ||||| |||||
Sbjct: 413 aaaatagttgttgagaaatcaacagtcccagttaagactgctga 456
>gb|AY466400.1| Populus tomentosa UDP-glucose dehydrogenase (ugdh) mRNA, complete
cds
Length = 1819
Score = 182 bits (92), Expect = 1e-044
Identities = 366/458 (79%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
|||||||||||||| ||||| || || || |||||||| || || || |||||||||||
Sbjct: 78 atggtgaagatctgttgcattggagcagggtatgtcggcgggcctacaatggctgtcatc 137
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctccaagccccgcattgag 320
|| ||||||||||| ||||| || || ||||||||||||| | || | ||||
Sbjct: 138 gcactcaagtgcccgtcaattgaagtggtggttgttgacatctgggaacctaggattgca 197
Query: 321 gcctggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcag 380
||||||||||| ||| ||||| ||||| ||||| ||||| ||||||| |||||| ||
Sbjct: 198 gcctggaacagtgaccagctccccatctatgagccaggcctgtatgatgtggtgaaggag 257
Query: 381 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctgac 440
||| | |||||||| ||||||||||||| || || |||||||| ||||||||||||||
Sbjct: 258 tgccgaggcaggaatctcttcttcagcaaagacgtggagaagcatgtcgctgaggctgat 317
Query: 441 atcatcttcgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggct 500
|| | || || ||||| |||||||| ||||| || | || |||||||||||||| |||
Sbjct: 318 atagtttttgtttcggtcaacacccctaccaaaactcaaggtcttggagctggcaaagct 377
Query: 501 gccgacctcacctactgggagagcgctgctcgtatgatcgccgatgtctccaagtctgac 560
|| || || || |||||||||||||| || || | || || ||||| ||||| ||||||
Sbjct: 378 gcagatctgacgtactgggagagcgcagcacgcacaattgctgatgtgtccaaatctgac 437
Query: 561 aagatcgttgtcgagaagtccaccgtccctgtcaagaccgctgaggctattgagaagatc 620
|| |||||||| | ||| || || ||||| || || || || ||||| ||||| ||||||
Sbjct: 438 aaaatcgttgttgggaaatcaacagtcccagttaaaactgccgaggcaattgaaaagatc 497
Query: 621 ttgacccacnncagcaagggcatcaactaccagatcct 658
||||||||| ||| ||||| ||||| | |||||||||
Sbjct: 498 ttgacccacaacagtaaggggatcaaattccagatcct 535
>gb|AI166913.1|AI166913 xylem.est.699 Poplar xylem Lambda ZAPII library Populus trichocarpa
cDNA 5', mRNA sequence
Length = 534
Score = 176 bits (89), Expect = 8e-043
Identities = 344/429 (80%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
|||||||||||||| ||||| || || || ||||||||||| || || |||||||||||
Sbjct: 60 atggtgaagatctgttgcattggagcagggtatgtcggtgggcctacaatggctgtcatc 119
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctccaagccccgcattgag 320
|| ||||||||||| ||||| || || ||||||||||||| | || | ||||
Sbjct: 120 gcactcaagtgcccgtcaattgaagtggtggttgttgacatctgggaacctaggattgca 179
Query: 321 gcctggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcag 380
||||||||||| ||| ||||| ||||| ||||| ||||| ||||||| |||||| ||
Sbjct: 180 gcctggaacagtgaccagctccccatctatgagccaggcctttatgatgtggtgaaggag 239
Query: 381 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctgac 440
||| | |||||||| ||||||||||||| ||||| |||||||| ||||| ||||||||
Sbjct: 240 tgccgaggcaggaatctcttcttcagcaaagatgtggagaagcatgtcgcagaggctgat 299
Query: 441 atcatcttcgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggct 500
|| | || || ||||| |||||||| ||||| || | || |||||||| ||||| |||
Sbjct: 300 atagtttttgtttcggtcaacacccctaccaaaactcaaggtcttggagcgggcaaagct 359
Query: 501 gccgacctcacctactgggagagcgctgctcgtatgatcgccgatgtctccaagtctgac 560
|| || || || |||||||||||||| || || | || || ||||| ||||| ||||||
Sbjct: 360 gcagatctgacgtactgggagagcgcagcacgcacaattgctgatgtgtccaaatctgac 419
Query: 561 aagatcgttgtcgagaagtccaccgtccctgtcaagaccgctgaggctattgagaagatc 620
|| |||||||| ||||| || || ||||| || || || || ||||| ||||| ||||||
Sbjct: 420 aaaatcgttgttgagaaatcaacagtcccagttaaaactgccgaggcaattgaaaagatc 479
Query: 621 ttgacccac 629
|||||||||
Sbjct: 480 ttgacccac 488
>gb|BI128641.1|BI128641 G079P39Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 493
Score = 176 bits (89), Expect = 8e-043
Identities = 332/413 (80%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
|||||||||||||| ||||| || || || ||||| ||||| || || ||||||||||||
Sbjct: 77 atggtgaagatctgttgcattggagcagggtatgtaggtgggcctacaatggctgtcatt 136
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctccaagccccgcattgag 320
|| ||||||||||| || |||||||| || || ||||||||||| | || | ||||
Sbjct: 137 gcactcaagtgcccggatattgaggtggtggtggttgacatctctgaacctaggattgca 196
Query: 321 gcctggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcag 380
||||||||||| ||| ||||| ||||| ||||| ||||| |||||||| |||||||||
Sbjct: 197 gcctggaacagtgaccagctccccatctatgagccaggccttgatgatgtggtgaagcag 256
Query: 381 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctgac 440
|||| |||| |||| ||||||||||||| ||||| |||||||| || || ||||||||
Sbjct: 257 cgcagaggcaagaacatcttcttcagcaccgatgtggagaagcatgttgcagaggctgat 316
Query: 441 atcatcttcgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggct 500
|| | || || || || |||||||| || || || | || ||||||||||| || |||
Sbjct: 317 atagtttttgtttcagtcaacaccccaactaaaactcagggtcttggagctggtaaagct 376
Query: 501 gccgacctcacctactgggagagcgctgctcgtatgatcgccgatgtctccaagtctgac 560
|| || || || ||||||||||| ||||| |||| ||| || || || ||||| ||||||
Sbjct: 377 gcagatctgacatactgggagagtgctgcacgtacgattgctgacgtgtccaaatctgac 436
Query: 561 aagatcgttgtcgagaagtccaccgtccctgtcaagaccgctgaggctattga 613
|| || ||||| ||||| || || | || || ||||| ||||||||||||||
Sbjct: 437 aaaatagttgttgagaaatcaacaggtccagttaagactgctgaggctattga 489
>gb|BU888742.1|BU888742 P011H10 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 464
Score = 176 bits (89), Expect = 8e-043
Identities = 305/377 (80%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
|||||||||||||| ||||| || || || ||||| ||||| || || ||||||||||||
Sbjct: 81 atggtgaagatctgttgcattggagcagggtatgtaggtgggcctacaatggctgtcatt 140
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctccaagccccgcattgag 320
|| ||||||||||| || |||||||| || |||||||||||||| | || | ||||
Sbjct: 141 gcactcaagtgcccggatattgaggtggtggttgttgacatctctgaacctaggattgca 200
Query: 321 gcctggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcag 380
||||||||||| ||| ||||| ||||| ||||| ||||| |||||||| |||||||||
Sbjct: 201 gcctggaacagtgaccagctccccatctatgagccaggccttgatgatgtggtgaagcag 260
Query: 381 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctgac 440
|||| |||| |||| ||||||||||||| ||||| |||||||| || || ||||||||
Sbjct: 261 cgcagaggcaagaacatcttcttcagcaccgatgtggagaagcatgttgcagaggctgat 320
Query: 441 atcatcttcgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggct 500
|| | || || || || |||||||| || || || | || ||||||||||| || |||
Sbjct: 321 atagtttttgtttcagtcaacaccccaactaaaactcagggtcttggagctggtaaagct 380
Query: 501 gccgacctcacctactgggagagcgctgctcgtatgatcgccgatgtctccaagtctgac 560
|| || || || ||||||||||| ||||| |||| ||| || || || ||||| ||||||
Sbjct: 381 gcagatctgacgtactgggagagtgctgcacgtacgattgctgacgtgtccaaatctgac 440
Query: 561 aagatcgttgtcgagaa 577
|| || ||||| |||||
Sbjct: 441 aaaatagttgttgagaa 457
>gb|CA931102.1|CA931102 MTU2TA.P2.B05 Aspen apex cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 383
Score = 168 bits (85), Expect = 2e-040
Identities = 268/329 (81%)
Strand = Plus / Minus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
|||||||||||||| ||||| || || || ||||| ||||| || || ||||||||||||
Sbjct: 331 atggtgaagatctgttgcattggagcagggtatgtaggtgggcctacaatggctgtcatt 272
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctccaagccccgcattgag 320
|| ||||||||||| || |||||||| || |||||||||||||| | || | ||||
Sbjct: 271 gcactcaagtgcccggatattgaggtggtggttgttgacatctctgaacctaggattgca 212
Query: 321 gcctggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcag 380
||||||||||| ||| ||||| ||||| ||||| ||||| |||||||| |||||||||
Sbjct: 211 gcctggaacagtgaccagctccccatctatgagccaggccttgatgatgtggtgaagcag 152
Query: 381 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctgac 440
|||| |||| |||| ||||||||||||| ||||| |||||||| || || ||||||||
Sbjct: 151 cgcagaggcaagaacatcttcttcagcaccgatgtggagaagcatgttgcagaggctgat 92
Query: 441 atcatcttcgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggct 500
|| | || || || || |||||||| || || || | || ||||||||||| ||||||
Sbjct: 91 atagtttttgtttcagtcaacaccccaactaaaactcagggtcttggagctggtaaggct 32
Query: 501 gccgacctcacctactgggagagcgctgc 529
|| || || || ||||||||||| |||||
Sbjct: 31 gcagatctgacatactgggagagtgctgc 3
>gb|AJ775321.1|AJ775321 AJ775321 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300031A09F1, mRNA sequence
Length = 455
Score = 168 bits (85), Expect = 2e-040
Identities = 304/377 (80%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
|||||||||||||| ||||| || || || ||||||||||| || || |||||||||||
Sbjct: 53 atggtgaagatctgttgcattggagcagggtatgtcggtgggcctacaatggctgtcatc 112
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctccaagccccgcattgag 320
|| ||||||||||| ||||| || || ||||||||||||| | || | ||||
Sbjct: 113 gcactcaagtgcccgtcaattgaagtggtggttgttgacatctgggaacctaggattgca 172
Query: 321 gcctggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcag 380
||||||||||| ||| ||||| ||||| ||||| ||||| ||||||| |||||| ||
Sbjct: 173 gcctggaacagtgaccagctccccatctatgagccaggcctgtatgatgtggtgaaggag 232
Query: 381 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctgac 440
||| | |||||||| ||||||||||||| ||||| |||||||| ||||||||||||||
Sbjct: 233 tgccgaggcaggaatctcttcttcagcaaagatgtggagaagcatgtcgctgaggctgat 292
Query: 441 atcatcttcgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggct 500
|| | || || ||||| |||||||| ||||| || | || |||||||||||||| |||
Sbjct: 293 atagtttttgtttcggtcaacacccctaccaaaactcaaggtcttggagctggcaaagct 352
Query: 501 gccgacctcacctactgggagagcgctgctcgtatgatcgccgatgtctccaagtctgac 560
|| || || || |||||||||||||| || || | || || ||||| ||||| ||||||
Sbjct: 353 gcagatctgacgtactgggagagcgcagcacgcacaattgctgatgtgtccaaatctgac 412
Query: 561 aagatcgttgtcgagaa 577
|| |||||||| |||||
Sbjct: 413 aaaatcgttgttgagaa 429
>gb|BU812502.1|BU812502 UL97TB03 Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 547
Score = 163 bits (82), Expect = 1e-038
Identities = 292/362 (80%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
|||||||||||||| ||||| || || || ||||| ||||| || || ||||||||||||
Sbjct: 183 atggtgaagatctgttgcattggagcagggtatgtaggtgggcctacaatggctgtcatt 242
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctccaagccccgcattgag 320
|| ||||||||||| || |||||||| || |||||||||||||| | || | ||||
Sbjct: 243 gcactcaagtgcccggatattgaggtggtggttgttgacatctctgaacctaggattgca 302
Query: 321 gcctggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcag 380
||||||||||| ||| ||||| ||||| ||||| ||||| |||||||| |||||||||
Sbjct: 303 gcctggaacagtgaccagctccccatctatgagccaggccttgatgatgtggtgaagcag 362
Query: 381 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctgac 440
|||| |||| |||| ||||||||||||| ||||| |||||||| || || ||||||||
Sbjct: 363 cgcagaggcaagaacatcttcttcagcaccgatgtggagaagcatgttgcagaggctgat 422
Query: 441 atcatcttcgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggct 500
|| | || || || || |||||||| || || || | || ||||||||||| || |||
Sbjct: 423 atagtttttgtttcagtcaacaccccaactaaaactcagggtcttggagctggtaaagct 482
Query: 501 gccgacctcacctactgggagagcgctgctcgtatgatcgccgatgtctccaagtctgac 560
|| || || || ||||||||||| ||||| | || ||| || || || ||||| ||||||
Sbjct: 483 gcagatctgacatactgggagagtgctgcacctacgattgctgacgtgtccaaatctgac 542
Query: 561 aa 562
||
Sbjct: 543 aa 544
>gb|CV131432.1|CV131432 L2P06d12 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 883
Score = 163 bits (82), Expect = 1e-038
Identities = 356/448 (79%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
|||||||||||||| ||||| || |||||||| |||||||| || ||||||||||| |||
Sbjct: 170 atggtgaagatctgttgcattggagctggctacgtcggtgggcctaccatggctgtgatt 229
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctccaagccccgcattgag 320
|| || ||||||||| | ||||| || || |||||||| || | |||| || ||
Sbjct: 230 gcactgaagtgcccaaaaattgaagtagtagttgttgatatttttgagcctcgaatcatt 289
Query: 321 gcctggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcag 380
|||||||| || ||| ||||| || || ||||| |||||||||||||| || || |||
Sbjct: 290 gcctggaatagtgaccaactccccatttatgagccaggcctcgatgatgtggtaaaacag 349
Query: 381 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctgac 440
|||||||| | |||||||||||| |||| ||||| || ||||| || || ||||||||
Sbjct: 350 tgcaggggaaagaacctcttctttagcaaagatgtggaaaagcatgtggcagaggctgat 409
Query: 441 atcatcttcgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggct 500
|| |||| || || ||||| || || ||||| || | || |||||||||||||| ||
Sbjct: 410 atagtctttgtatctgtgaatacaccaaccaaaactcagggacttggagctggcaaagca 469
Query: 501 gccgacctcacctactgggagagcgctgctcgtatgatcgccgatgtctccaagtctgac 560
|| || || || || |||||||| |||||||||||||| || ||||| || |||||||||
Sbjct: 470 gctgatctaacttattgggagagtgctgctcgtatgattgcagatgtttcaaagtctgac 529
Query: 561 aagatcgttgtcgagaagtccaccgtccctgtcaagaccgctgaggctattgagaagatc 620
|| || ||||| ||||| || || || || || || || || || || ||||| |||||
Sbjct: 530 aaaattgttgttgagaaatcaacagttccagtgaaaacggcagaagcgattgaaaagatt 589
Query: 621 ttgacccacnncagcaagggcatcaact 648
||||||||| |||||| ||||||||||
Sbjct: 590 ttgacccacaacagcaaaggcatcaact 617
>gb|CA825241.1|CA825241 R55G08 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 571
Score = 161 bits (81), Expect = 5e-038
Identities = 344/429 (80%), Gaps = 2/429 (0%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
|||||||||||||| ||||| || || || ||||||||||| || || |||||||||||
Sbjct: 131 atggtgaagatctgttgcattggagcagggtatgtcggtggacctacaatggctgtcatc 190
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctccaagccccgcattgag 320
|| ||||||||||| ||||| || || ||||||||||||| | || | ||||
Sbjct: 191 gcactcaagtgcccgtcaattgaagtggtggttgttgacatctgggaacctaggattgca 250
Query: 321 gcctggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcag 380
||||||||||| ||| ||||| ||||| ||||| ||||| ||||||| |||||| ||
Sbjct: 251 gcctggaacagtgaccagctccccatctatgagccaggcctgtatgatgtggtgaaggag 310
Query: 381 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctgac 440
||| | |||||||| ||||||||||||| || || |||||||| ||||||||||||||
Sbjct: 311 tgccgaggcaggaatctcttcttcagcaaagacgtggagaagcatgtcgctgaggctgat 370
Query: 441 atcatcttcgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggct 500
|| | || || ||||| |||||||| ||||| || | || |||||||||||||| |||
Sbjct: 371 atagtttttgtttcggtcaacacccctaccaaaactcaaggtcttggagctggcaaagct 430
Query: 501 gccgacctcacctactgggagagcgctg-ctcgtatgatcgcc-gatgtctccaagtctg 558
|| || || || |||||||||||||| | | || | || ||| ||||| ||||| ||||
Sbjct: 431 gcagatctgacgtactgggagagcgcagccacgcacaattgcctgatgtgtccaaatctg 490
Query: 559 acaagatcgttgtcgagaagtccaccgtccctgtcaagaccgctgaggctattgagaaga 618
|||| |||||||| ||||| || || ||||| || || || || ||||| ||||| ||||
Sbjct: 491 acaaaatcgttgttgagaaatcaacagtcccagttaaaactgccgaggcaattgaaaaga 550
Query: 619 tcttgaccc 627
|||||||||
Sbjct: 551 tcttgaccc 559
>gb|BU820219.1|BU820219 UA52DPF01 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 376
Score = 157 bits (79), Expect = 7e-037
Identities = 199/239 (83%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
|||||||||||||| ||||| || || || ||||| ||||| || || ||||||||||||
Sbjct: 91 atggtgaagatctgttgcattggagcagggtatgtaggtgggcctacaatggctgtcatt 150
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctccaagccccgcattgag 320
|| ||||||||||| || |||||||| || |||||||||||||| | || | ||||
Sbjct: 151 gcactcaagtgcccggatattgaggtggtggttgttgacatctctgaacctaggattgca 210
Query: 321 gcctggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcag 380
||||||||||| ||| ||||| ||||| ||||| ||||| |||||||| |||||||||
Sbjct: 211 gcctggaacagtgaccagctccccatctatgagccaggccttgatgatgtggtgaagcag 270
Query: 381 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctga 439
|||| |||| |||| ||||||||||||| ||||| |||||||| || || ||||||||
Sbjct: 271 cgcagaggcaagaacatcttcttcagcaccgatgtggagaagcatgttgcggaggctga 329
>gb|BU879221.1|BU879221 V057D11 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 732
Score = 155 bits (78), Expect = 3e-036
Identities = 355/448 (79%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
|||||||||||||| ||||| || |||||||| |||||||| || ||||||||||| |||
Sbjct: 110 atggtgaagatctgttgcattggagctggctacgtcggtgggcctaccatggctgtgatt 169
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctccaagccccgcattgag 320
|| || ||||||||| | ||||| || || |||||||| || | |||| || ||
Sbjct: 170 gcactgaagtgcccaaaaattgaagtggtagttgttgatatttttgagcctcgaatcatt 229
Query: 321 gcctggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcag 380
|||||||| || ||| ||||| || || ||||| |||||||||||||| || || |||
Sbjct: 230 gcctggaatagtgaccaactccccatttatgagccaggcctcgatgatgtggtaaaacag 289
Query: 381 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctgac 440
|||||||| | |||||||||||| |||| ||||| || ||||| || || ||||||||
Sbjct: 290 tgcaggggaaagaacctcttctttagcaaagatgtggaaaagcatgtggcagaggctgat 349
Query: 441 atcatcttcgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggct 500
|| |||| || || ||||| || || ||||| || | || |||||||||||||| ||
Sbjct: 350 atagtctttgtatctgtgaatacaccaaccaaaactcagggacttggagctggcaaagca 409
Query: 501 gccgacctcacctactgggagagcgctgctcgtatgatcgccgatgtctccaagtctgac 560
|| || || || || |||||||| |||||||||||||| || ||||| || || ||||||
Sbjct: 410 gctgatctaacttattgggagagtgctgctcgtatgattgcagatgtttcaaaatctgac 469
Query: 561 aagatcgttgtcgagaagtccaccgtccctgtcaagaccgctgaggctattgagaagatc 620
|| || ||||| ||||| || || || || || || || || || || ||||| |||||
Sbjct: 470 aaaattgttgttgagaaatcaacagttccagtgaaaacggcagaagcaattgaaaagatt 529
Query: 621 ttgacccacnncagcaagggcatcaact 648
||||||||| |||||| ||||||||||
Sbjct: 530 ttgacccacaacagcaaaggcatcaact 557
>gb|CN518001.1|CN518001 GQ0094.B3_E20 GQ009 Populus trichocarpa x Populus deltoides cDNA
clone GQ0094_E20 5', mRNA sequence
Length = 553
Score = 155 bits (78), Expect = 3e-036
Identities = 237/290 (81%)
Strand = Plus / Plus
Query: 339 ctcccgatctacgagcccggcctcgatgatgttgtgaagcagtgcaggggcaggaacctc 398
||||| ||||| ||||| ||||| |||||||| |||||||||||||| |||| |||| ||
Sbjct: 1 ctccccatctatgagccaggccttgatgatgtggtgaagcagtgcagaggcaagaacatc 60
Query: 399 ttcttcagcactgatgttgagaagcacgtcgctgaggctgacatcatcttcgtctcggtg 458
||||||||||| ||||| |||||||| || || |||||||| || | || || || ||
Sbjct: 61 ttcttcagcaccgatgtggagaagcatgttgcagaggctgatatagtttttgtttcagtc 120
Query: 459 aacacccccaccaagacccgtgggcttggagctggcaaggctgccgacctcacctactgg 518
|||||||| || || || | || ||||||||||| || ||||| || || || ||||||
Sbjct: 121 aacaccccaactaaaactcagggtcttggagctggtaaagctgcagatctgacatactgg 180
Query: 519 gagagcgctgctcgtatgatcgccgatgtctccaagtctgacaagatcgttgtcgagaag 578
||||| ||||| |||| ||| || ||||| ||||| |||||||| || ||||| |||||
Sbjct: 181 gagagtgctgcacgtacgattgctgatgtgtccaaatctgacaaaatagttgttgagaaa 240
Query: 579 tccaccgtccctgtcaagaccgctgaggctattgagaagatcttgaccca 628
|| || ||||| || ||||| || ||||||||||| ||||| ||||||||
Sbjct: 241 tcaacagtcccagttaagactgccgaggctattgaaaagattttgaccca 290
>gb|BI128346.1|BI128346 G074P53Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 452
Score = 153 bits (77), Expect = 1e-035
Identities = 302/377 (80%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
|||||||||||||| ||||| || || || ||||||||||| || || |||||||||||
Sbjct: 76 atggtgaagatctgttgcattggagcagggtatgtcggtgggcctacaatggctgtcatc 135
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctccaagccccgcattgag 320
|| ||||||||||| | ||||| || || ||||||||||||| | || | ||||
Sbjct: 136 gcactcaagtgcccggcaattgaagtggtggttgttgacatctgggaacctaggattgca 195
Query: 321 gcctggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcag 380
||||||||||| ||| ||||| ||||| ||||| ||||| ||||||| |||||| ||
Sbjct: 196 gcctggaacagtgaccagctccccatctatgagccaggcctgtatgatgtggtgaaggag 255
Query: 381 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctgac 440
||| | |||||||| ||||||||||||| || || |||||||| |||||||||||||
Sbjct: 256 tgccgaggcaggaatctcttcttcagcaaagacgtggagaagcatatcgctgaggctgat 315
Query: 441 atcatcttcgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggct 500
|| | || || ||||| |||||||| ||||| || | || |||||||||||||| |||
Sbjct: 316 atagtttttgtttcggtcaacacccctaccaaaactcaaggtcttggagctggcaaagct 375
Query: 501 gccgacctcacctactgggagagcgctgctcgtatgatcgccgatgtctccaagtctgac 560
|| || || || |||||||||||||| || || | || || || || ||||| ||||||
Sbjct: 376 gcagatctgacgtactgggagagcgcagcacgcacaattgctgacgtgtccaaatctgac 435
Query: 561 aagatcgttgtcgagaa 577
|| |||||||| |||||
Sbjct: 436 aaaatcgttgttgagaa 452
>gb|CK102314.1|CK102314 G073P06.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G073P06 5', mRNA sequence
Length = 325
Score = 151 bits (76), Expect = 4e-035
Identities = 187/224 (83%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
|||||||||||||| ||||| || || || ||||| ||||| || || ||||||||||||
Sbjct: 46 atggtgaagatctgttgcattggagcagggtatgtaggtgggcctacaatggctgtcatt 105
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctccaagccccgcattgag 320
|| ||||||||||| || |||||||| || |||||||||||||| | || | ||||
Sbjct: 106 gcactcaagtgcccggatattgaggtggtggttgttgacatctctgaacctaggattgca 165
Query: 321 gcctggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcag 380
||||||||||| ||| ||||| ||||| ||||| ||||| |||||||| |||||||||
Sbjct: 166 gcctggaacagtgaccagctccccatctatgagccaggccttgatgatgtggtgaagcag 225
Query: 381 tgcaggggcaggaacctcttcttcagcactgatgttgagaagca 424
|||| |||| |||| ||||||||||||| ||||| ||||||||
Sbjct: 226 cgcagaggcaagaacatcttcttcagcaccgatgtggagaagca 269
>gb|BP926489.1|BP926489 BP926489 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-059_N06.f 5', mRNA sequence
Length = 396
Score = 149 bits (75), Expect = 2e-034
Identities = 198/239 (82%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
|||||||||||||| ||||| || || || ||||| ||||| || || ||||||||||||
Sbjct: 92 atggtgaagatctgttgcattggagcagggtatgtaggtgggcctacaatggctgtcatt 151
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctccaagccccgcattgag 320
|| ||||||||||| || |||||||| || |||||||||||||| | || | ||||
Sbjct: 152 gcactcaagtgcccggatattgaggtggtggttgttgacatctctgaacctaggattgca 211
Query: 321 gcctggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcag 380
||||||||||| ||| ||||| ||||| ||||| ||||| |||||||| |||||||||
Sbjct: 212 gcctggaacagtgaccagctccccatctatgagccaggccttgatgatgtggtgaagcag 271
Query: 381 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctga 439
| || |||| |||| ||||||||||||| ||||| |||||||| || || ||||||||
Sbjct: 272 cgaagaggcaagaacatcttcttcagcaccgatgtggagaagcatgttgcagaggctga 330
>gb|BP929570.1|BP929570 BP929570 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-099_G18.f 5', mRNA sequence
Length = 473
Score = 149 bits (75), Expect = 2e-034
Identities = 297/371 (80%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
|||||||||||||| ||||| || || || ||||||||||| || || |||||||||||
Sbjct: 102 atggtgaagatctgttgcattggagcagggtatgtcggtgggcctacaatggctgtcatc 161
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctccaagccccgcattgag 320
|| ||||||||||| ||||| || || ||||||||||||| | || | ||||
Sbjct: 162 gcactcaagtgcccgtcaattgaagtggtggttgttgacatctgggaacctaggattgca 221
Query: 321 gcctggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcag 380
||||||||||| ||| ||||| ||||| ||||| ||||| ||||||| |||||| ||
Sbjct: 222 gcctggaacagtgaccagctccccatctatgagccaggcctgtatgatgtggtgaaggag 281
Query: 381 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctgac 440
||| | |||||||| ||||||||||||| || || |||||||| ||||||||||||||
Sbjct: 282 tgccgaggcaggaatctcttcttcagcaaagacgtggagaagcatgtcgctgaggctgat 341
Query: 441 atcatcttcgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggct 500
|| | || || ||||| |||||||| ||||| || | || |||||||||||||| |||
Sbjct: 342 atagtttttgtttcggtcaacacccctaccaaaactcaaggtcttggagctggcaaagct 401
Query: 501 gccgacctcacctactgggagagcgctgctcgtatgatcgccgatgtctccaagtctgac 560
|| || || || |||||||||||||| | || | || || ||||| ||||| ||||||
Sbjct: 402 gcagatctgacgtactgggagagcgcaacacgcacaattgctgatgtgtccaaatctgac 461
Query: 561 aagatcgttgt 571
|| ||||||||
Sbjct: 462 aaaatcgttgt 472
>gb|BI130825.1|BI130825 G111P32Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 477
Score = 147 bits (74), Expect = 7e-034
Identities = 263/326 (80%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
|||||||||||||| ||||| || || || ||||||||||| || || |||||||||||
Sbjct: 60 atggtgaagatctgttgcattggagcagggtatgtcggtgggcctacaatggctgtcatc 119
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctccaagccccgcattgag 320
|| ||||||||||| | ||||| || || ||||||||||||| | || | ||||
Sbjct: 120 gcactcaagtgcccggcaattgaagtggtggttgttgacatctgggaacctaggattgca 179
Query: 321 gcctggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcag 380
||||||||||| ||| ||||| ||||| ||||| ||||| ||||||| |||||| ||
Sbjct: 180 gcctggaacagtgaccagctccccatctatgagccaggcctgtatgatgtggtgaaggag 239
Query: 381 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctgac 440
||| | |||||||| ||||||||||||| || || |||||||| |||||||||||||
Sbjct: 240 tgccgaggcaggaatctcttcttcagcaaagacgtggagaagcatatcgctgaggctgat 299
Query: 441 atcatcttcgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggct 500
|| | || || ||||| |||||||| ||||| || | || |||||||||||||| |||
Sbjct: 300 atagtttttgtttcggtcaacacccctaccaaaactcaaggtcttggagctggcaaagct 359
Query: 501 gccgacctcacctactgggagagcgc 526
|| || || || ||||||||||||||
Sbjct: 360 gcagatctgacgtactgggagagcgc 385
>gb|BU812794.1|BU812794 N001D09 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 692
Score = 139 bits (70), Expect = 2e-031
Identities = 353/448 (78%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
||||| |||||||| ||||| || |||||||| |||||||| || ||||||||||| |||
Sbjct: 152 atggtaaagatctgttgcattggagctggctacgtcggtgggcctaccatggctgtgatt 211
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctccaagccccgcattgag 320
|| || ||||||||| | ||||| || || |||||||| || | |||| || ||
Sbjct: 212 gcactgaagtgcccaaaaattgaagtagtagttgttgatatttttgagcctcgaatcatt 271
Query: 321 gcctggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcag 380
|||||||| || ||| ||||| || || ||||| ||||| |||||||| || || |||
Sbjct: 272 gcctggaatagtgaccaactccccatttatgagccaggccttgatgatgtggtaaaacag 331
Query: 381 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctgac 440
|||||||| | |||||||||||| |||| ||||| || ||||| || || ||||||||
Sbjct: 332 tgcaggggaaagaacctcttctttagcaaagatgtggaaaagcatgtggcagaggctgat 391
Query: 441 atcatcttcgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggct 500
|| |||| || || ||||| || || ||||| || | || |||||||||||||| ||
Sbjct: 392 atagtctttgtatctgtgaatacaccaaccaaaactcagggacttggagctggcaaagca 451
Query: 501 gccgacctcacctactgggagagcgctgctcgtatgatcgccgatgtctccaagtctgac 560
|| || || || || |||||||| |||||||||||||| || ||||| || || ||||||
Sbjct: 452 gctgatctaacttattgggagagtgctgctcgtatgattgcagatgtttcaaaatctgac 511
Query: 561 aagatcgttgtcgagaagtccaccgtccctgtcaagaccgctgaggctattgagaagatc 620
|| || ||||| ||||| || || || || || || || || || || ||||| |||||
Sbjct: 512 aaaattgttgttgagaaatcaacagttccagtgaaaacggcagaagcaattgaaaagatt 571
Query: 621 ttgacccacnncagcaagggcatcaact 648
||||||||| |||||| ||||||||||
Sbjct: 572 ttgacccacaacagcaaaggcatcaact 599
>gb|BU893543.1|BU893543 P079C03 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 510
Score = 139 bits (70), Expect = 2e-031
Identities = 262/326 (80%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
|||||||||||| | ||||| || || || ||||||||||| || || |||||||||||
Sbjct: 148 atggtgaagatcagttgcattggagcagggtatgtcggtgggcctacaatggctgtcatc 207
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctccaagccccgcattgag 320
|| ||||||||||| ||||| || || ||||||||||||| | || | ||||
Sbjct: 208 gcactcaagtgcccgtcaattgaagtggtggttgttgacatctgggaacctaggattgca 267
Query: 321 gcctggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcag 380
||||||||||| ||| ||||| ||||| ||||| ||||| ||||||| |||||| ||
Sbjct: 268 gcctggaacagtgaccagctccccatctatgagccaggcctgtatgatgtggtgaaggag 327
Query: 381 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctgac 440
||| | |||||||| ||||||||||||| || || |||||||| ||||||||||||||
Sbjct: 328 tgccgaggcaggaatctcttcttcagcaaagacgtggagaagcatgtcgctgaggctgat 387
Query: 441 atcatcttcgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggct 500
|| | || || ||||| |||||||| ||||| || | || |||||||||||||| |||
Sbjct: 388 atagtttttgtttcggtcaacacccctaccaaaactcaaggtcttggagctggcaaagct 447
Query: 501 gccgacctcacctactgggagagcgc 526
|| || || || ||||||||||||||
Sbjct: 448 gcagatctgacgtactgggagagcgc 473
>gb|CF119756.1|CF119756 MTU10CS.P5.H11 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 613
Score = 139 bits (70), Expect = 2e-031
Identities = 353/448 (78%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
|||||||||||||| ||||| || |||||||| |||||||| || ||||||||||| |||
Sbjct: 126 atggtgaagatctgttgcattggagctggctacgtcggtgggcctaccatggctgtgatt 185
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctccaagccccgcattgag 320
|| || ||||||||| | ||||| || || |||||||| || | |||| || ||
Sbjct: 186 gcactgaagtgcccaaaaattgaagtagtagttgttgatatttttgagcctcgaatcatt 245
Query: 321 gcctggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcag 380
|||||||| || ||| ||||| || || ||||| ||||| |||||||| || || ||
Sbjct: 246 gcctggaatagtgaccaactccccatttatgagccaggccttgatgatgtggtaaaacaa 305
Query: 381 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctgac 440
|||||||| | |||||||||||| |||| ||||| || ||||| || || ||||||||
Sbjct: 306 tgcaggggaaagaacctcttctttagcaaagatgtggaaaagcatgtggcagaggctgat 365
Query: 441 atcatcttcgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggct 500
|| |||| || || ||||| || || ||||| || | || |||||||||||||| ||
Sbjct: 366 atagtctttgtatctgtgaatacaccaaccaaaactcagggacttggagctggcaaagca 425
Query: 501 gccgacctcacctactgggagagcgctgctcgtatgatcgccgatgtctccaagtctgac 560
|| || || || || |||||||| |||||||||||||| || ||||| || || ||||||
Sbjct: 426 gctgatctaacttattgggagagtgctgctcgtatgattgcagatgtttcaaaatctgac 485
Query: 561 aagatcgttgtcgagaagtccaccgtccctgtcaagaccgctgaggctattgagaagatc 620
|| || ||||| ||||| || || || || || || || || || || ||||| |||||
Sbjct: 486 aaaattgttgttgagaaatcaacagttccagtgaaaacggcagaagcaattgaaaagatt 545
Query: 621 ttgacccacnncagcaagggcatcaact 648
||||||||| |||||| ||||||||||
Sbjct: 546 ttgacccacaacagcaaaggcatcaact 573
>gb|DN493679.1|DN493679 G103P78.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G103P78 5', mRNA sequence
Length = 711
Score = 139 bits (70), Expect = 2e-031
Identities = 353/448 (78%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
||||| |||||||| ||||| || |||||||| |||||||| || ||||||||||| |||
Sbjct: 51 atggtaaagatctgttgcattggagctggctacgtcggtgggcctaccatggctgtgatt 110
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctccaagccccgcattgag 320
|| || ||||||||| | ||||| || || |||||||| || | |||| || ||
Sbjct: 111 gcactgaagtgcccaaaaattgaagtagtagttgttgatatttttgagcctcgaatcatt 170
Query: 321 gcctggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcag 380
|||||||| || ||| ||||| || || ||||| ||||| |||||||| || || |||
Sbjct: 171 gcctggaatagtgaccaactccccatttatgagccaggccttgatgatgtggtaaaacag 230
Query: 381 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctgac 440
|||||||| | |||||||||||| |||| ||||| || ||||| || || ||||||||
Sbjct: 231 tgcaggggaaagaacctcttctttagcaaagatgtggaaaagcatgtggcagaggctgat 290
Query: 441 atcatcttcgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggct 500
|| |||| || || ||||| || || ||||| || | || |||||||||||||| ||
Sbjct: 291 atagtctttgtatctgtgaatacaccaaccaaaactcagggacttggagctggcaaagca 350
Query: 501 gccgacctcacctactgggagagcgctgctcgtatgatcgccgatgtctccaagtctgac 560
|| || || || || |||||||| |||||||||||||| || ||||| || || ||||||
Sbjct: 351 gctgatctaacttattgggagagtgctgctcgtatgattgcagatgtttcaaaatctgac 410
Query: 561 aagatcgttgtcgagaagtccaccgtccctgtcaagaccgctgaggctattgagaagatc 620
|| || ||||| ||||| || || || || || || || || || || ||||| |||||
Sbjct: 411 aaaattgttgttgagaaatcaacagttccagtgaaaacggcagaagcaattgaaaagatt 470
Query: 621 ttgacccacnncagcaagggcatcaact 648
||||||||| |||||| ||||||||||
Sbjct: 471 ttgacccacaacagcaaaggcatcaact 498
>gb|CX657991.1|CX657991 PO01007H07 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01007H07 5', mRNA sequence
Length = 614
Score = 135 bits (68), Expect = 3e-030
Identities = 221/272 (81%)
Strand = Plus / Plus
Query: 357 ggcctcgatgatgttgtgaagcagtgcaggggcaggaacctcttcttcagcactgatgtt 416
||||| |||||||| ||||||||| |||| |||| |||| ||||||||||||| |||||
Sbjct: 2 ggccttgatgatgtggtgaagcagcgcagaggcaagaacatcttcttcagcaccgatgtg 61
Query: 417 gagaagcacgtcgctgaggctgacatcatcttcgtctcggtgaacacccccaccaagacc 476
|||||||| || || |||||||| || | || || || || |||||||| || || ||
Sbjct: 62 gagaagcatgttgcagaggctgatatagtttttgtttcagtcaacaccccaactaaaact 121
Query: 477 cgtgggcttggagctggcaaggctgccgacctcacctactgggagagcgctgctcgtatg 536
| || ||||||||||| || ||||| || || || ||||||||||| ||||| |||| |
Sbjct: 122 cagggtcttggagctggtaaagctgcagatctgacatactgggagagtgctgcacgtacg 181
Query: 537 atcgccgatgtctccaagtctgacaagatcgttgtcgagaagtccaccgtccctgtcaag 596
|| || || || ||||| |||||||| || ||||| ||||| || || ||||| || |||
Sbjct: 182 attgctgacgtgtccaaatctgacaaaatagttgttgagaaatcaacagtcccagttaag 241
Query: 597 accgctgaggctattgagaagatcttgaccca 628
|| |||||||||||||| ||||| ||||||||
Sbjct: 242 actgctgaggctattgaaaagattttgaccca 273
>gb|CN193344.1|CN193344 PtdH844 hybrid poplar systemically wound-induced leaf cDNA library
Populus trichocarpa x Populus deltoides cDNA 5, mRNA
sequence
Length = 430
Score = 131 bits (66), Expect = 4e-029
Identities = 293/365 (80%), Gaps = 3/365 (0%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgt-cggtggcccaaccatggctgtcat 259
|||||||||||||| |||| || || || ||||| |||||| || || |||||||||||
Sbjct: 8 atggtgaagatctgtngcattggagcagggtatgtacggtgggcctacaatggctgtcat 67
Query: 260 t-gccct-caagtgcccagacattgaggttgtcgttgttgacatctccaagccccgcatt 317
|| || ||||||||| || || ||||| || |||||||||||||| | || | |||
Sbjct: 68 aagcactacaagtgcccggatatagaggtggtggttgttgacatctctgaacctaggatt 127
Query: 318 gaggcctggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaag 377
| ||||||||||| ||| ||||| ||||| ||||| ||||| |||||||| ||||||
Sbjct: 128 gcagcctggaacagtgaccagctccccatctatgagccaggccttgatgatgtggtgaag 187
Query: 378 cagtgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggct 437
|||||||| |||| |||| ||||||||||||| ||||| |||||||| || || ||||||
Sbjct: 188 cagtgcagaggcaagaacatcttcttcagcaccgatgtggagaagcatgtagcagaggct 247
Query: 438 gacatcatcttcgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaag 497
|| || | || || || || |||||||| || || || | || ||||||||||| ||
Sbjct: 248 gatatagtttttgtttcagtcaacaccccaactaaaactcagggtcttggagctggtaaa 307
Query: 498 gctgccgacctcacctactgggagagcgctgctcgtatgatcgccgatgtctccaagtct 557
||||| || || || ||||||||||| ||||| |||| ||| || ||||| ||||| |||
Sbjct: 308 gctgcagatctgacatactgggagagtgctgcacgtacgattgctgatgtgtccaaatct 367
Query: 558 gacaa 562
|||||
Sbjct: 368 gacaa 372
>gb|CN193184.1|CN193184 PtdH606 hybrid poplar systemically wound-induced leaf cDNA library
Populus trichocarpa x Populus deltoides cDNA 5, mRNA
sequence
Length = 439
Score = 123 bits (62), Expect = 1e-026
Identities = 261/327 (79%), Gaps = 1/327 (0%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
|||||||||||||| ||||| || || || ||||||||||| || || |||||||||||
Sbjct: 51 atggtgaagatctgttgcattggagcagggtatgtcggtggacctacaatggctgtcatc 110
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctccaagccccgcattgag 320
|| ||||||||||| ||||| || || ||||||||||||| | || | ||||
Sbjct: 111 gcactcaagtgcccgtcaattgaagtggtggttgttgacatctgggaacctaggattgca 170
Query: 321 gcctggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcag 380
||||||||||| ||| ||||| ||||| ||||| ||||| ||||||| |||||| ||
Sbjct: 171 gcctggaacagtgaccagctccccatctatgagccaggcctgtatgatgtggtgaaggag 230
Query: 381 tgcaggggcaggaacctcttcttcagcactgatgttgag-aagcacgtcgctgaggctga 439
||| | |||||||| ||||||||||||| || || ||| ||||| ||||||||||||||
Sbjct: 231 tgccgaggcaggaatctcttcttcagcaaagacgtggagaaagcatgtcgctgaggctga 290
Query: 440 catcatcttcgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggc 499
|| | || ||||| |||||||| ||||| || | || |||||||||||||| ||
Sbjct: 291 tatagtgnnngtttcggtcaacacccctaccaaaactcaaggtcttggagctggcaaagc 350
Query: 500 tgccgacctcacctactgggagagcgc 526
||| || || || ||||||||||||||
Sbjct: 351 tgcagatctgacgtactgggagagcgc 377
>gb|BU821117.1|BU821117 UB19CPD04 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 417
Score = 117 bits (59), Expect = 6e-025
Identities = 286/362 (79%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
|||||||||||||| ||||| || |||||||| |||||||| || ||||||||||| |||
Sbjct: 2 atggtgaagatctgttgcattggagctggctacgtcggtgggcctaccatggctgtgatt 61
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctccaagccccgcattgag 320
|| || ||||||||| | ||||| || || |||||||| || | |||| || ||
Sbjct: 62 gcactgaagtgcccaaaaattgaagtagtagttgttgatatttttgagcctcgaatcatt 121
Query: 321 gcctggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcag 380
|||||||| || ||| ||||| || || ||||| ||||| |||||||| || || |||
Sbjct: 122 gcctggaatagtgaccaactccccatttatgagccaggccttgatgatgtggtaaaacag 181
Query: 381 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctgac 440
|||||||| | |||||||||||| |||| ||||| || ||||| || || ||||||||
Sbjct: 182 tgcaggggaaagaacctcttctttagcaaagatgtggaaaagcatgtggcagaggctgat 241
Query: 441 atcatcttcgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggct 500
|| |||| || || ||||| || || ||||| || | || |||||||||||||| ||
Sbjct: 242 atagtctttgtatctgtgaatacaccaaccaaaactcagggacttggagctggcaaagca 301
Query: 501 gccgacctcacctactgggagagcgctgctcgtatgatcgccgatgtctccaagtctgac 560
|| || || || || ||||||| |||||||||||||| || ||||| || || ||||||
Sbjct: 302 gctgatctaacttatagggagagtgctgctcgtatgattgcagatgtntcaaaatctgac 361
Query: 561 aa 562
||
Sbjct: 362 aa 363
>gb|AI161480.1|AI161480 A001P44U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 398
Score = 111 bits (56), Expect = 4e-023
Identities = 193/239 (80%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
|||||||||||||| ||||| || || || ||||| ||||| || || |||||||||||
Sbjct: 3 atggtgaagatctgttgcattggagcagggtatgtnggtgggcctacaatggctgtcatc 62
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctccaagccccgcattgag 320
|| ||||||||||| ||||| || || ||||||||||||| | || | ||||
Sbjct: 63 gcactcaagtgcccgtcaattgaagtggtggttgttgacatctgggaacctaggattgca 122
Query: 321 gcctggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcag 380
||||||||||| ||| ||||| ||||| ||||| ||||| ||||||| |||||| ||
Sbjct: 123 gcctggaacagtgaccagctccccatctatgagccaggcctgtatgatgtggtgaaggag 182
Query: 381 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctga 439
||| | |||||||| ||||||||||||| || || |||||||| ||||||||||||||
Sbjct: 183 tgccgaggcaggaatctcttcttcagcaaagacgtggagaagcatgtcgctgaggctga 241
>gb|BU880723.1|BU880723 UM53TH09 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 533
Score = 111 bits (56), Expect = 4e-023
Identities = 300/379 (79%), Gaps = 3/379 (0%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
|||||||||||||| ||||| || |||||||| |||||||| || ||||||||||| |||
Sbjct: 140 atggtgaagatctgttgcattggagctggctacgtcggtgggcctaccatggctgtgatt 199
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctccaagccccgcattgag 320
|| || ||||||||| | ||||| || || |||||||| || | |||| || ||
Sbjct: 200 gcactgaagtgcccaaaaattgaagtggtagttgttgatatttgtgagcctcgaatcatt 259
Query: 321 gcctggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaagcag 380
|||||||| || ||| ||||| || || ||||| ||||||||||||| || || |||
Sbjct: 260 gcctggaatagtgaccaactccccatttatgagccatgcctcgatgatgtggtaaaacag 319
Query: 381 tgcaggggcaggaacctcttcttcagcact--gatgttgagaagcacgtcgctgaggctg 438
|||||||| | |||||||||||| || ||| ||||| || ||||| || || |||||||
Sbjct: 320 tgcaggggaaagaacctcttctttag-actaagatgtggaaaagcatgtggcagaggctg 378
Query: 439 acatcatcttcgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaagg 498
| || |||| || || ||||| || || ||||| || | || |||||||||||||| |
Sbjct: 379 atatagtctttgtatctgtgaatacaccaaccaaaactcagggacttggagctggcaaag 438
Query: 499 ctgccgacctcacctactgggagagcgctgctcgtatgatcgccgatgtctccaagtctg 558
| || || || || || |||||||| |||||||||||||| || ||||| || |||||||
Sbjct: 439 cagctgatctaacttattgggagagtgctgctcgtatgattgcagatgtttcgaagtctg 498
Query: 559 acaagatcgttgtcgagaa 577
|| | || ||||| |||||
Sbjct: 499 actacattgttgtagagaa 517
>gb|BU878936.1|BU878936 V053F09 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 632
Score = 99.6 bits (50), Expect = 1e-019
Identities = 86/98 (87%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
|||||||||||||| ||||| || ||||||||||||||||| || |||||||| || |||
Sbjct: 140 atggtgaagatctgttgcattggagctggctatgtcggtgggcctaccatggccgtgatt 199
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttga 298
|| || ||||||||||||||||| || || ||||||||
Sbjct: 200 gcactgaagtgcccagacattgaagtagtggttgttga 237
Score = 85.7 bits (43), Expect = 2e-015
Identities = 239/305 (78%)
Strand = Plus / Plus
Query: 357 ggcctcgatgatgttgtgaagcagtgcaggggcaggaacctcttcttcagcactgatgtt 416
||||| ||||| || || || ||||||||||| | |||||||||||| |||| |||||
Sbjct: 296 ggccttgatgacgtggtaaaacagtgcaggggaaagaacctcttctttagcaaagatgtg 355
Query: 417 gagaagcacgtcgctgaggctgacatcatcttcgtctcggtgaacacccccaccaagacc 476
|| ||||| || || || ||||| || |||| || || || || || || ||||| ||
Sbjct: 356 gaaaagcatgtggcagaagctgatatagtctttgtatcagtaaatacaccaaccaaaact 415
Query: 477 cgtgggcttggagctggcaaggctgccgacctcacctactgggagagcgctgctcgtatg 536
| || |||||||||||||| || |||||||| | || |||||||| ||||||||||||
Sbjct: 416 cagggacttggagctggcaaagcagccgacctagcttattgggagagtgctgctcgtatg 475
Query: 537 atcgccgatgtctccaagtctgacaagatcgttgtcgagaagtccaccgtccctgtcaag 596
|| || ||||| || || ||||||| || ||||| ||||| || || || || || ||
Sbjct: 476 attgcagatgtatcaaaaactgacaaaattgttgttgagaaatcaacagttccagtgaaa 535
Query: 597 accgctgaggctattgagaagatcttgacccacnncagcaagggcatcaactaccagatc 656
|| || || || ||||| ||||| ||||||||| |||||| |||||||||| |||||
Sbjct: 536 acggcagaagcaattgaaaagattttgacccacaacagcaaaggcatcaactttcagatt 595
Query: 657 ctttc 661
|||||
Sbjct: 596 ctttc 600
>gb|BP925307.1|BP925307 BP925307 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-044_B17.f 5', mRNA sequence
Length = 231
Score = 95.6 bits (48), Expect = 2e-018
Identities = 90/104 (86%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
|||||||||||||| ||||| || || || ||||| ||||| || || ||||||||||||
Sbjct: 92 atggtgaagatctgttgcattggagcagggtatgtaggtgggcctacaatggctgtcatt 151
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttgacatctc 304
|| ||||||||||| || |||||||| || ||||||||||||||
Sbjct: 152 gcactcaagtgcccggatattgaggtggtggttgttgacatctc 195
>gb|BI127315.1|BI127315 G058P56Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 527
Score = 83.8 bits (42), Expect = 9e-015
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
|||||||||||||| ||| | || |||||||||||||| || || |||||||| || |||
Sbjct: 129 atggtgaagatctgttgccttggagctggctatgtcggagggcctaccatggccgtgatt 188
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttga 298
|| || ||||||||||||||||| || || ||||||||
Sbjct: 189 gcactgaagtgcccagacattgaagtagtggttgttga 226
Score = 69.9 bits (35), Expect = 1e-010
Identities = 152/191 (79%)
Strand = Plus / Plus
Query: 357 ggcctcgatgatgttgtgaagcagtgcaggggcaggaacctcttcttcagcactgatgtt 416
||||| |||||||| || || ||||||||||| | |||||||||||| |||| |||||
Sbjct: 285 ggccttgatgatgtggtaaaacagtgcaggggaaagaacctcttctttagcaaagatgtg 344
Query: 417 gagaagcacgtcgctgaggctgacatcatcttcgtctcggtgaacacccccaccaagacc 476
|| ||||| || || || ||||| || |||| || || || || || || ||||| ||
Sbjct: 345 gaaaagcatgtggcagaagctgatatagtctttgtatcagtaaatacaccaaccaaaact 404
Query: 477 cgtgggcttggagctggcaaggctgccgacctcacctactgggagagcgctgctcgtatg 536
| || |||||||||||||| || |||||||| | || |||||||| ||||||||||||
Sbjct: 405 cagggacttggagctggcaaagcagccgacctagcttattgggagagtgctgctcgtatg 464
Query: 537 atcgccgatgt 547
|| || |||||
Sbjct: 465 attgcagatgt 475
>gb|CK107867.1|CK107867 G058P56 Populus tension wood cDNA library Populus tremula x Populus
tremuloides cDNA clone G058P56 5', mRNA sequence
Length = 574
Score = 83.8 bits (42), Expect = 9e-015
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
|||||||||||||| ||| | || |||||||||||||| || || |||||||| || |||
Sbjct: 128 atggtgaagatctgttgccttggagctggctatgtcggagggcctaccatggccgtgatt 187
Query: 261 gccctcaagtgcccagacattgaggttgtcgttgttga 298
|| || ||||||||||||||||| || || ||||||||
Sbjct: 188 gcactgaagtgcccagacattgaagtagtggttgttga 225
Score = 75.8 bits (38), Expect = 2e-012
Identities = 229/292 (78%), Gaps = 1/292 (0%)
Strand = Plus / Plus
Query: 357 ggcctcgatgatgttgtgaagcagtgcaggggcaggaacctcttcttcagcactgatgtt 416
||||| |||||||| || || ||||||||||| | |||||||||||| |||| |||||
Sbjct: 284 ggccttgatgatgtggtaaaacagtgcaggggaaagaacctcttctttagcaaagatgtg 343
Query: 417 gagaagcacgtcgctgaggctgacatcatcttcgtctcggtgaacacccccaccaagacc 476
|| ||||| || || || ||||| || |||| || || || || || || ||||| ||
Sbjct: 344 gaaaagcatgtggcagaagctgatatagtctttgtatcagtaaatacaccaaccaaaact 403
Query: 477 cgtgggcttggagctggcaaggctgccgacctcacctactgggagagcgctgctcgtatg 536
| || |||||||||||||| || |||||||| | || |||||||| ||||||||||||
Sbjct: 404 cagggacttggagctggcaaagcagccgacctagcttattgggagagtgctgctcgtatg 463
Query: 537 atcgccgatgtctccaagtctgacaagatcgttgtcgagaagtccaccgtccctgtcaag 596
|| || ||||| || | ||||||| || ||||| ||||| || || || || || ||
Sbjct: 464 attgcagatgtatcaagaactgacaaaattgttgttgagaaatcaacagttccagtgaaa 523
Query: 597 accgctgaggctattgagaagatcttgacccacnncagcaagggcatcaact 648
|| || || || ||||| ||||| ||||||||| |||||| ||||||||||
Sbjct: 524 acagcagaagcaattgacaagatgttgacccacaacagcaa-ggcatcaact 574
>gb|BU875482.1|BU875482 V007F08 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 703
Score = 79.8 bits (40), Expect = 1e-013
Identities = 134/166 (80%)
Strand = Plus / Plus
Query: 483 cttggagctggcaaggctgccgacctcacctactgggagagcgctgctcgtatgatcgcc 542
|||||||||||||| || || || || || || |||||||| |||||||||||||| ||
Sbjct: 25 cttggagctggcaaagcagctgatctaacttattgggagagtgctgctcgtatgattgca 84
Query: 543 gatgtctccaagtctgacaagatcgttgtcgagaagtccaccgtccctgtcaagaccgct 602
||||| || || |||||||| || ||||| ||||| || || || || || || || ||
Sbjct: 85 gatgtttcaaaatctgacaaaattgttgttgagaaatcaacagttccagtgaaaacggca 144
Query: 603 gaggctattgagaagatcttgacccacnncagcaagggcatcaact 648
|| || ||||| ||||| ||||||||| |||||| ||||||||||
Sbjct: 145 gaagcaattgaaaagattttgacccacaacagcaaaggcatcaact 190
>gb|AI162135.1|AI162135 A012P58U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 508
Score = 77.8 bits (39), Expect = 5e-013
Identities = 235/296 (79%), Gaps = 4/296 (1%)
Strand = Plus / Plus
Query: 364 atgatgttgtgaagcagtgcaggggcaggaacctcttcttcagcactgatgttgagaagc 423
||||||| |||||| ||||| | || ||||| ||||||||||||| || || |||||||
Sbjct: 4 atgatgtggtgaaggagtgccgagg-aggaatctcttcttcagcaaagacgtggagaagc 62
Query: 424 acgtcgctgaggctgacatcatcttcgtctcggtgaacacccccaccaagac-ccgtggg 482
| |||||||||||||| || | || || ||||| |||||||| ||||| || | ||
Sbjct: 63 atgtcgctgaggctgatatagtttttgtttcggtcaacacccctaccaaaacttcaaggt 122
Query: 483 cttggagctggcaaggctgccgacctcacctactgggagagcgctgctcgtatgatcgcc 542
|||||||||||||| |||| || || || |||||||||||||| || | || ||
Sbjct: 123 cttggagctggcaa-actgcagatctgacgtactgggagagcgc-anacgcacaattgct 180
Query: 543 gatgtctccaagtctgacaagatcgttgtcgagaagtccaccgtccctgtcaagaccgct 602
||||| ||||| |||||||| |||||||| ||||| || || ||||| || || || ||
Sbjct: 181 gatgtgtccaaatctgacaaaatcgttgttgagaaatcaacagtcccagttaaaactgcc 240
Query: 603 gaggctattgagaagatcttgacccacnncagcaagggcatcaactaccagatcct 658
||||| ||||| |||||| |||||||| ||| ||||| ||||| | |||||||||
Sbjct: 241 gaggcaattgaaaagatcctgacccacaacagtaaggggatcaaattccagatcct 296
>gb|CA933828.1|CA933828 MTU3TS.P13.C03 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 560
Score = 75.8 bits (38), Expect = 2e-012
Identities = 96/116 (82%)
Strand = Plus / Minus
Query: 543 gatgtctccaagtctgacaagatcgttgtcgagaagtccaccgtccctgtcaagaccgct 602
||||| ||||| |||||||| |||||||| ||||| || || ||||| || || || ||
Sbjct: 533 gatgtgtccaaatctgacaaaatcgttgttgagaaatcaacagtcccagttaaaactgcc 474
Query: 603 gaggctattgagaagatcttgacccacnncagcaagggcatcaactaccagatcct 658
||||| ||||| ||||||||||||||| ||| ||||| ||||| | |||||||||
Sbjct: 473 gaggcaattgaaaagatcttgacccacaacagtaaggggatcaaattccagatcct 418
>gb|CA934089.1|CA934089 MTU3TS.P2.G02 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 563
Score = 75.8 bits (38), Expect = 2e-012
Identities = 96/116 (82%)
Strand = Plus / Plus
Query: 543 gatgtctccaagtctgacaagatcgttgtcgagaagtccaccgtccctgtcaagaccgct 602
||||| ||||| |||||||| |||||||| ||||| || || ||||| || || || ||
Sbjct: 28 gatgtgtccaaatctgacaaaatcgttgttgagaaatcaacagtcccagttaaaactgcc 87
Query: 603 gaggctattgagaagatcttgacccacnncagcaagggcatcaactaccagatcct 658
||||| ||||| ||||||||||||||| ||| ||||| ||||| | |||||||||
Sbjct: 88 gaggcaattgaaaagatcttgacccacaacagtaaggggatcaaattccagatcct 143
>gb|CF119122.1|CF119122 MTU10CS.P13.G08 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 566
Score = 75.8 bits (38), Expect = 2e-012
Identities = 96/116 (82%)
Strand = Plus / Minus
Query: 543 gatgtctccaagtctgacaagatcgttgtcgagaagtccaccgtccctgtcaagaccgct 602
||||| ||||| |||||||| |||||||| ||||| || || ||||| || || || ||
Sbjct: 539 gatgtgtccaaatctgacaaaatcgttgttgagaaatcaacagtcccagttaaaactgcc 480
Query: 603 gaggctattgagaagatcttgacccacnncagcaagggcatcaactaccagatcct 658
||||| ||||| ||||||||||||||| ||| ||||| ||||| | |||||||||
Sbjct: 479 gaggcaattgaaaagatcttgacccacaacagtaaggggatcaaattccagatcct 424
>gb|CF119514.1|CF119514 MTU10CS.P2.H01 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 566
Score = 75.8 bits (38), Expect = 2e-012
Identities = 96/116 (82%)
Strand = Plus / Minus
Query: 543 gatgtctccaagtctgacaagatcgttgtcgagaagtccaccgtccctgtcaagaccgct 602
||||| ||||| |||||||| |||||||| ||||| || || ||||| || || || ||
Sbjct: 539 gatgtgtccaaatctgacaaaatcgttgttgagaaatcaacagtcccagttaaaactgcc 480
Query: 603 gaggctattgagaagatcttgacccacnncagcaagggcatcaactaccagatcct 658
||||| ||||| ||||||||||||||| ||| ||||| ||||| | |||||||||
Sbjct: 479 gaggcaattgaaaagatcttgacccacaacagtaaggggatcaaattccagatcct 424
>gb|BU877082.1|BU877082 V029E04 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 219
Score = 69.9 bits (35), Expect = 1e-010
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 201 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgtcatt 260
|||||||||||||| ||||| || |||||||| |||||||| || ||||||||||| |||
Sbjct: 120 atggtgaagatctgttgcattggagctggctacgtcggtgggcctaccatggctgtgatt 179
Query: 261 gccctcaagtgccca 275
|| || || ||||||
Sbjct: 180 gcactgaactgccca 194
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 69,258
Number of Sequences: 369679
Number of extensions: 69258
Number of successful extensions: 20375
Number of sequences better than 0.5: 65
Number of HSP's better than 0.5 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 20205
Number of HSP's gapped (non-prelim): 129
length of query: 729
length of database: 203,408,664
effective HSP length: 19
effective length of query: 710
effective length of database: 196,384,763
effective search space: 139433181730
effective search space used: 139433181730
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)