BLASTN 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2618988.2.1
         (631 letters)

Database: Populus_nucl_with_EST.fasta 
           369,679 sequences; 203,408,664 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CK091692.1|CK091692  F118P83.3pR Populus flower cDNA libr...    42   0.025
gb|CV131524.1|CV131524  L2P08f04 Populus stem seasonal libra...    42   0.025
gb|CX175426.1|CX175426  G03_69-48_13.ab1 leaf inoculated wit...    42   0.025
gb|DT505087.1|DT505087  WS01315.B21_P21 PTxD-IL-FL-A-4 Popul...    42   0.025
gb|DV463827.1|DV463827  MTUNUL1.P2.H06 NUL Populus fremontii...    42   0.025
gb|CX175955.1|CX175955  H09_69-110_15.ab1 leaf inoculated wi...    40   0.099
gb|BU867007.1|BU867007  S073C04 Populus imbibed seed cDNA li...    38   0.39 
gb|CA927927.1|CA927927  MTU6TR.P14.F07 Aspen root cDNA Libra...    38   0.39 
gb|CA928103.1|CA928103  MTU6TR.P16.G08 Aspen root cDNA Libra...    38   0.39 
gb|CA928630.1|CA928630  MTU6TR.P5.A02 Aspen root cDNA Librar...    38   0.39 
gb|CA928701.1|CA928701  MTU6TR.P5.G09 Aspen root cDNA Librar...    38   0.39 
gb|CK092895.1|CK092895  G099P16.3pR Populus tension wood cDN...    38   0.39 
gb|CN549439.1|CN549439  GQ0244.B3_P17 GQ024 Populus trichoca...    38   0.39 
gb|CV228049.1|CV228049  WS0168.B21_P06 PT-DX-A-7 Populus tri...    38   0.39 
gb|CV232946.1|CV232946  WS0199.B21_C17 PT-DX-N-A-10 Populus ...    38   0.39 
gb|CV239647.1|CV239647  WS0233.B21_A21 PT-MB-A-13 Populus tr...    38   0.39 
gb|CV240366.1|CV240366  WS0251.B21_D01 PT-MB-N-A-15 Populus ...    38   0.39 
gb|CV243950.1|CV243950  WS0253.B21_E24 PT-MB-N-A-15 Populus ...    38   0.39 
gb|CV248698.1|CV248698  WS01121.B21_K04 PT-P-FL-A-2 Populus ...    38   0.39 
gb|CV251520.1|CV251520  WS0117.B21_F06 PT-P-FL-A-2 Populus t...    38   0.39 
gb|CV254010.1|CV254010  WS0223.B21_L15 PTxD-ICC-A-12 Populus...    38   0.39 
gb|CV254519.1|CV254519  WS0241.B21_H06 PTxD-ICC-N-A-14 Popul...    38   0.39 
gb|CV254681.1|CV254681  WS0241.B21_O05 PTxD-ICC-N-A-14 Popul...    38   0.39 
gb|CV255842.1|CV255842  WS0242.B21_D08 PTxD-ICC-N-A-14 Popul...    38   0.39 
gb|CV259541.1|CV259541  WS02011.B21_K03 PTxN-IB-N-A-11 Popul...    38   0.39 
gb|CV262980.1|CV262980  WS02020.B21_A10 PTxN-IB-N-A-11 Popul...    38   0.39 
gb|CV267105.1|CV267105  WS02030.B21_N13 PTxN-IB-N-A-11 Popul...    38   0.39 
gb|CV275581.1|CV275581  WS0176.B21_O22 PTxD-NR-A-8 Populus t...    38   0.39 
gb|DN490541.1|DN490541  UL60PG04.3pR Populus cold stressed l...    38   0.39 
gb|DT485621.1|DT485621  WS02528.B21_L13 PT-MB-N-A-15 Populus...    38   0.39 
gb|DT487243.1|DT487243  WS02533.B21_C18 PT-MB-N-A-15 Populus...    38   0.39 
gb|DT491311.1|DT491311  WS02547.C21_G03 PT-MB-N-A-15 Populus...    38   0.39 
gb|DT507816.1|DT507816  WS02419.BR_E19 PTxD-ICC-N-A-14 Popul...    38   0.39 
gb|DT508682.1|DT508682  WS02421.BR_K09 PTxD-ICC-N-A-14 Popul...    38   0.39 
gb|DT512444.1|DT512444  WS02419.B21_E19 PTxD-ICC-N-A-14 Popu...    38   0.39 
gb|DT513287.1|DT513287  WS02421.B21_K09 PTxD-ICC-N-A-14 Popu...    38   0.39 
gb|DT518633.1|DT518633  WS02438.B21_M07 PTxD-ICC-N-A-14 Popu...    38   0.39 
gb|DT519928.1|DT519928  WS02446.B21.1_B07 PTxD-ICC-N-A-14 Po...    38   0.39 
gb|DT520512.1|DT520512  WS02447.B21_M03 PTxD-ICC-N-A-14 Popu...    38   0.39 
gb|DT520632.1|DT520632  WS02448.B21_B17 PTxD-ICC-N-A-14 Popu...    38   0.39 
gb|DV465617.1|DV465617  MTUNUL1.P40.H07 NUL Populus fremonti...    38   0.39 
>gb|CK091692.1|CK091692 F118P83.3pR Populus flower cDNA library Populus trichocarpa cDNA
           clone F118P83 3', mRNA sequence
          Length = 863

 Score = 42.1 bits (21), Expect = 0.025
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 541 tgcggcgcccacgacctgaccacgagacccctatccttggt 581
           ||||| ||||||||| | | |||||| ||||||||||||||
Sbjct: 449 tgcggagcccacgacttcagcacgagtcccctatccttggt 489
>gb|CV131524.1|CV131524 L2P08f04 Populus stem seasonal library Populus deltoides cDNA, mRNA
           sequence
          Length = 778

 Score = 42.1 bits (21), Expect = 0.025
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 362 acccttccacggccacggcca 382
           |||||||||||||||||||||
Sbjct: 222 acccttccacggccacggcca 242
>gb|CX175426.1|CX175426 G03_69-48_13.ab1 leaf inoculated with Marssonia pathogen of Populus
           deltoides Populus deltoides cDNA, mRNA sequence
          Length = 687

 Score = 42.1 bits (21), Expect = 0.025
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 541 tgcggcgcccacgacctgaccacgagacccctatccttggt 581
           ||||| ||||||||| | | |||||| ||||||||||||||
Sbjct: 464 tgcggagcccacgacttcagcacgagtcccctatccttggt 504
>gb|DT505087.1|DT505087 WS01315.B21_P21 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
           deltoides cDNA clone WS01315_P21 3', mRNA sequence
          Length = 953

 Score = 42.1 bits (21), Expect = 0.025
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 541 tgcggcgcccacgacctgaccacgagacccctatccttggt 581
           ||||| ||||||||| | | |||||| ||||||||||||||
Sbjct: 444 tgcggagcccacgacttcagcacgagtcccctatccttggt 484
>gb|DV463827.1|DV463827 MTUNUL1.P2.H06 NUL Populus fremontii x Populus angustifolia cDNA,
           mRNA sequence
          Length = 805

 Score = 42.1 bits (21), Expect = 0.025
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 362 acccttccacggccacggcca 382
           |||||||||||||||||||||
Sbjct: 188 acccttccacggccacggcca 208
>gb|CX175955.1|CX175955 H09_69-110_15.ab1 leaf inoculated with Marssonia pathogen of
           Populus deltoides Populus deltoides cDNA, mRNA sequence
          Length = 659

 Score = 40.1 bits (20), Expect = 0.099
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 362 acccttccacggccacggcc 381
           ||||||||||||||||||||
Sbjct: 151 acccttccacggccacggcc 170
>gb|BU867007.1|BU867007 S073C04 Populus imbibed seed cDNA library Populus tremula cDNA 5
           prime, mRNA sequence
          Length = 606

 Score = 38.2 bits (19), Expect = 0.39
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 363 cccttccacggccacggcc 381
           |||||||||||||||||||
Sbjct: 222 cccttccacggccacggcc 204
>gb|CA927927.1|CA927927 MTU6TR.P14.F07 Aspen root cDNA Library Populus tremuloides cDNA,
           mRNA sequence
          Length = 479

 Score = 38.2 bits (19), Expect = 0.39
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 363 cccttccacggccacggcc 381
           |||||||||||||||||||
Sbjct: 40  cccttccacggccacggcc 22
>gb|CA928103.1|CA928103 MTU6TR.P16.G08 Aspen root cDNA Library Populus tremuloides cDNA,
           mRNA sequence
          Length = 526

 Score = 38.2 bits (19), Expect = 0.39
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 363 cccttccacggccacggcc 381
           |||||||||||||||||||
Sbjct: 40  cccttccacggccacggcc 22
>gb|CA928630.1|CA928630 MTU6TR.P5.A02 Aspen root cDNA Library Populus tremuloides cDNA,
           mRNA sequence
          Length = 464

 Score = 38.2 bits (19), Expect = 0.39
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 363 cccttccacggccacggcc 381
           |||||||||||||||||||
Sbjct: 40  cccttccacggccacggcc 22
>gb|CA928701.1|CA928701 MTU6TR.P5.G09 Aspen root cDNA Library Populus tremuloides cDNA,
           mRNA sequence
          Length = 482

 Score = 38.2 bits (19), Expect = 0.39
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 363 cccttccacggccacggcc 381
           |||||||||||||||||||
Sbjct: 40  cccttccacggccacggcc 22
>gb|CK092895.1|CK092895 G099P16.3pR Populus tension wood cDNA library Populus tremula x
           Populus tremuloides cDNA clone G099P16 3', mRNA sequence
          Length = 803

 Score = 38.2 bits (19), Expect = 0.39
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 363 cccttccacggccacggcc 381
           |||||||||||||||||||
Sbjct: 450 cccttccacggccacggcc 468
>gb|CN549439.1|CN549439 GQ0244.B3_P17 GQ024 Populus trichocarpa x Populus deltoides cDNA
           clone GQ0244_P17 5', mRNA sequence
          Length = 709

 Score = 38.2 bits (19), Expect = 0.39
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 363 cccttccacggccacggcc 381
           |||||||||||||||||||
Sbjct: 544 cccttccacggccacggcc 526
>gb|CV228049.1|CV228049 WS0168.B21_P06 PT-DX-A-7 Populus trichocarpa cDNA clone WS0168_P06
           3', mRNA sequence
          Length = 758

 Score = 38.2 bits (19), Expect = 0.39
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 363 cccttccacggccacggcc 381
           |||||||||||||||||||
Sbjct: 462 cccttccacggccacggcc 480
>gb|CV232946.1|CV232946 WS0199.B21_C17 PT-DX-N-A-10 Populus trichocarpa cDNA clone
           WS0199_C17 3', mRNA sequence
          Length = 485

 Score = 38.2 bits (19), Expect = 0.39
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 363 cccttccacggccacggcc 381
           |||||||||||||||||||
Sbjct: 454 cccttccacggccacggcc 472
>gb|CV239647.1|CV239647 WS0233.B21_A21 PT-MB-A-13 Populus trichocarpa cDNA clone WS0233_A21
           3', mRNA sequence
          Length = 730

 Score = 38.2 bits (19), Expect = 0.39
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 363 cccttccacggccacggcc 381
           |||||||||||||||||||
Sbjct: 464 cccttccacggccacggcc 482
>gb|CV240366.1|CV240366 WS0251.B21_D01 PT-MB-N-A-15 Populus trichocarpa cDNA clone
           WS0251_D01 3', mRNA sequence
          Length = 549

 Score = 38.2 bits (19), Expect = 0.39
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 363 cccttccacggccacggcc 381
           |||||||||||||||||||
Sbjct: 304 cccttccacggccacggcc 322
>gb|CV243950.1|CV243950 WS0253.B21_E24 PT-MB-N-A-15 Populus trichocarpa cDNA clone
           WS0253_E24 3', mRNA sequence
          Length = 880

 Score = 38.2 bits (19), Expect = 0.39
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 363 cccttccacggccacggcc 381
           |||||||||||||||||||
Sbjct: 512 cccttccacggccacggcc 530
>gb|CV248698.1|CV248698 WS01121.B21_K04 PT-P-FL-A-2 Populus trichocarpa cDNA clone
           WS01121_K04 3', mRNA sequence
          Length = 704

 Score = 38.2 bits (19), Expect = 0.39
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 363 cccttccacggccacggcc 381
           |||||||||||||||||||
Sbjct: 473 cccttccacggccacggcc 491
>gb|CV251520.1|CV251520 WS0117.B21_F06 PT-P-FL-A-2 Populus trichocarpa cDNA clone
           WS0117_F06 3', mRNA sequence
          Length = 595

 Score = 38.2 bits (19), Expect = 0.39
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 363 cccttccacggccacggcc 381
           |||||||||||||||||||
Sbjct: 473 cccttccacggccacggcc 491
>gb|CV254010.1|CV254010 WS0223.B21_L15 PTxD-ICC-A-12 Populus trichocarpa x Populus
           deltoides cDNA clone WS0223_L15 3', mRNA sequence
          Length = 713

 Score = 38.2 bits (19), Expect = 0.39
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 363 cccttccacggccacggcc 381
           |||||||||||||||||||
Sbjct: 315 cccttccacggccacggcc 333
>gb|CV254519.1|CV254519 WS0241.B21_H06 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
           deltoides cDNA clone WS0241_H06 3', mRNA sequence
          Length = 755

 Score = 38.2 bits (19), Expect = 0.39
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 363 cccttccacggccacggcc 381
           |||||||||||||||||||
Sbjct: 316 cccttccacggccacggcc 334
>gb|CV254681.1|CV254681 WS0241.B21_O05 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
           deltoides cDNA clone WS0241_O05 3', mRNA sequence
          Length = 729

 Score = 38.2 bits (19), Expect = 0.39
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 363 cccttccacggccacggcc 381
           |||||||||||||||||||
Sbjct: 509 cccttccacggccacggcc 527
>gb|CV255842.1|CV255842 WS0242.B21_D08 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
           deltoides cDNA clone WS0242_D08 3', mRNA sequence
          Length = 876

 Score = 38.2 bits (19), Expect = 0.39
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 363 cccttccacggccacggcc 381
           |||||||||||||||||||
Sbjct: 465 cccttccacggccacggcc 483
>gb|CV259541.1|CV259541 WS02011.B21_K03 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
           cDNA clone WS02011_K03 3', mRNA sequence
          Length = 574

 Score = 38.2 bits (19), Expect = 0.39
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 363 cccttccacggccacggcc 381
           |||||||||||||||||||
Sbjct: 523 cccttccacggccacggcc 541
>gb|CV262980.1|CV262980 WS02020.B21_A10 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
           cDNA clone WS02020_A10 3', mRNA sequence
          Length = 895

 Score = 38.2 bits (19), Expect = 0.39
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 363 cccttccacggccacggcc 381
           |||||||||||||||||||
Sbjct: 761 cccttccacggccacggcc 743
>gb|CV267105.1|CV267105 WS02030.B21_N13 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
           cDNA clone WS02030_N13 3', mRNA sequence
          Length = 890

 Score = 38.2 bits (19), Expect = 0.39
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 363 cccttccacggccacggcc 381
           |||||||||||||||||||
Sbjct: 436 cccttccacggccacggcc 454
>gb|CV275581.1|CV275581 WS0176.B21_O22 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
           cDNA clone WS0176_O22 3', mRNA sequence
          Length = 809

 Score = 38.2 bits (19), Expect = 0.39
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 363 cccttccacggccacggcc 381
           |||||||||||||||||||
Sbjct: 494 cccttccacggccacggcc 512
>gb|DN490541.1|DN490541 UL60PG04.3pR Populus cold stressed leaves cDNA library Populus
           tremula x Populus tremuloides cDNA clone UL60PG04 3',
           mRNA sequence
          Length = 499

 Score = 38.2 bits (19), Expect = 0.39
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 363 cccttccacggccacggcc 381
           |||||||||||||||||||
Sbjct: 477 cccttccacggccacggcc 495
>gb|DT485621.1|DT485621 WS02528.B21_L13 PT-MB-N-A-15 Populus trichocarpa cDNA clone
           WS02528_L13 3', mRNA sequence
          Length = 913

 Score = 38.2 bits (19), Expect = 0.39
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 363 cccttccacggccacggcc 381
           |||||||||||||||||||
Sbjct: 469 cccttccacggccacggcc 487
>gb|DT487243.1|DT487243 WS02533.B21_C18 PT-MB-N-A-15 Populus trichocarpa cDNA clone
           WS02533_C18 3', mRNA sequence
          Length = 839

 Score = 38.2 bits (19), Expect = 0.39
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 363 cccttccacggccacggcc 381
           |||||||||||||||||||
Sbjct: 336 cccttccacggccacggcc 354
>gb|DT491311.1|DT491311 WS02547.C21_G03 PT-MB-N-A-15 Populus trichocarpa cDNA clone
           WS02547_G03 3', mRNA sequence
          Length = 838

 Score = 38.2 bits (19), Expect = 0.39
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 363 cccttccacggccacggcc 381
           |||||||||||||||||||
Sbjct: 458 cccttccacggccacggcc 476
>gb|DT507816.1|DT507816 WS02419.BR_E19 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
           deltoides cDNA clone WS02419_E19 5', mRNA sequence
          Length = 484

 Score = 38.2 bits (19), Expect = 0.39
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 363 cccttccacggccacggcc 381
           |||||||||||||||||||
Sbjct: 53  cccttccacggccacggcc 35
>gb|DT508682.1|DT508682 WS02421.BR_K09 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
           deltoides cDNA clone WS02421_K09 5', mRNA sequence
          Length = 704

 Score = 38.2 bits (19), Expect = 0.39
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 363 cccttccacggccacggcc 381
           |||||||||||||||||||
Sbjct: 227 cccttccacggccacggcc 209
>gb|DT512444.1|DT512444 WS02419.B21_E19 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
           deltoides cDNA clone WS02419_E19 3', mRNA sequence
          Length = 484

 Score = 38.2 bits (19), Expect = 0.39
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 363 cccttccacggccacggcc 381
           |||||||||||||||||||
Sbjct: 432 cccttccacggccacggcc 450
>gb|DT513287.1|DT513287 WS02421.B21_K09 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
           deltoides cDNA clone WS02421_K09 3', mRNA sequence
          Length = 700

 Score = 38.2 bits (19), Expect = 0.39
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 363 cccttccacggccacggcc 381
           |||||||||||||||||||
Sbjct: 474 cccttccacggccacggcc 492
>gb|DT518633.1|DT518633 WS02438.B21_M07 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
           deltoides cDNA clone WS02438_M07 3', mRNA sequence
          Length = 846

 Score = 38.2 bits (19), Expect = 0.39
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 363 cccttccacggccacggcc 381
           |||||||||||||||||||
Sbjct: 333 cccttccacggccacggcc 351
>gb|DT519928.1|DT519928 WS02446.B21.1_B07 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
           deltoides cDNA clone WS02446_B07 3', mRNA sequence
          Length = 946

 Score = 38.2 bits (19), Expect = 0.39
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 363 cccttccacggccacggcc 381
           |||||||||||||||||||
Sbjct: 511 cccttccacggccacggcc 529
>gb|DT520512.1|DT520512 WS02447.B21_M03 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
           deltoides cDNA clone WS02447_M03 3', mRNA sequence
          Length = 898

 Score = 38.2 bits (19), Expect = 0.39
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 363 cccttccacggccacggcc 381
           |||||||||||||||||||
Sbjct: 435 cccttccacggccacggcc 453
>gb|DT520632.1|DT520632 WS02448.B21_B17 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
           deltoides cDNA clone WS02448_B17 3', mRNA sequence
          Length = 857

 Score = 38.2 bits (19), Expect = 0.39
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 363 cccttccacggccacggcc 381
           |||||||||||||||||||
Sbjct: 453 cccttccacggccacggcc 471
>gb|DV465617.1|DV465617 MTUNUL1.P40.H07 NUL Populus fremontii x Populus angustifolia cDNA,
           mRNA sequence
          Length = 810

 Score = 38.2 bits (19), Expect = 0.39
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 363 cccttccacggccacggcc 381
           |||||||||||||||||||
Sbjct: 766 cccttccacggccacggcc 748
  Database: Populus_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:49 PM
  Number of letters in database: 203,408,664
  Number of sequences in database:  369,679
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 44,702
Number of Sequences: 369679
Number of extensions: 44702
Number of successful extensions: 12432
Number of sequences better than  0.5: 41
Number of HSP's better than  0.5 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 12380
Number of HSP's gapped (non-prelim): 52
length of query: 631
length of database: 203,408,664
effective HSP length: 19
effective length of query: 612
effective length of database: 196,384,763
effective search space: 120187474956
effective search space used: 120187474956
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)