BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2521865.2.1
(638 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DN494269.1|DN494269 K019P78.5pR Populus apical shoot cDN... 127 6e-028
gb|BU893572.1|BU893572 P079E11 Populus petioles cDNA librar... 125 2e-027
gb|BU896882.1|BU896882 X047C09 Populus wood cDNA library Po... 123 9e-027
gb|CN520831.1|CN520831 GQ0108.B3_C09 GQ010 Populus trichoca... 119 1e-025
gb|CK319456.1|CK319456 X9P11a03 Populus stem seasonal libra... 119 1e-025
gb|CV243493.1|CV243493 WS0252.B21_A11 PT-MB-N-A-15 Populus ... 119 1e-025
gb|CV261044.1|CV261044 WS02015.B21_L08 PTxN-IB-N-A-11 Popul... 119 1e-025
gb|CV268494.1|CV268494 WS0205.B21_K08 PTxN-IB-N-A-11 Populu... 119 1e-025
gb|CV272637.1|CV272637 WS0158.B21_D22 PTxN-IB-A-6 Populus t... 119 1e-025
gb|DT522999.1|DT522999 WS02038.B21_I04 PTxN-IB-N-A-11 Popul... 119 1e-025
gb|BU834125.1|BU834125 T057B09 Populus apical shoot cDNA li... 115 2e-024
gb|CK103295.1|CK103295 G111P56.5pR Populus tension wood cDN... 115 2e-024
gb|CN523749.1|CN523749 GQ015M11.T3_F10 GQ015 Populus tricho... 115 2e-024
gb|CK317839.1|CK317839 B9P02d09 Populus stem seasonal libra... 113 8e-024
gb|AI167104.1|AI167104 xylem.est.870 Poplar xylem Lambda ZA... 111 3e-023
gb|CA925749.1|CA925749 MTU7TL.P5.D09 Aspen leaf cDNA Librar... 111 3e-023
gb|CF233991.1|CF233991 PtaJXO1B11B1103 Poplar cDNA library ... 111 3e-023
gb|CV255021.1|CV255021 WS02411.B21_N12 PTxD-ICC-N-A-14 Popu... 111 3e-023
gb|BU815980.1|BU815980 N058E11 Populus bark cDNA library Po... 109 1e-022
gb|CK115917.1|CK115917 Y017C02 Populus infected leaf substr... 109 1e-022
gb|AI162882.1|AI162882 A026P17U Hybrid aspen plasmid librar... 101 3e-020
gb|BP933667.1|BP933667 BP933667 full-length enriched poplar... 101 3e-020
gb|CK089268.1|CK089268 B007P10.3pR Hybrid aspen plasmid lib... 96 2e-018
gb|AJ767248.1|AJ767248 AJ767248 Populus euphratica leaf adu... 96 2e-018
gb|BU898025.1|BU898025 X073E11 Populus wood cDNA library Po... 94 8e-018
gb|CK093203.1|CK093203 G111P56.3pR Populus tension wood cDN... 92 3e-017
gb|CF119018.1|CF119018 MTU10CS.P12.D11 Aspen stem cDNA Libr... 88 5e-016
gb|CF119541.1|CF119541 MTU10CS.P3.B11 Aspen stem cDNA Libra... 88 5e-016
gb|CF119878.1|CF119878 MTU10CS.P7.D09 Aspen stem cDNA Libra... 88 5e-016
gb|DN484786.1|DN484786 K019P78.3pR Populus apical shoot cDN... 88 5e-016
gb|AI165115.1|AI165115 A075p46u Hybrid aspen plasmid librar... 76 2e-012
gb|DT469942.1|DT469942 WS01919.C21_G06 PT-DX-N-A-10 Populus... 74 7e-012
gb|BI130843.1|BI130843 G111P56Y Populus cambium cDNA librar... 70 1e-010
gb|BU889976.1|BU889976 P029A06 Populus petioles cDNA librar... 66 2e-009
gb|CK319636.1|CK319636 B9SP06d09 Populus stem seasonal libr... 66 2e-009
gb|CK099736.1|CK099736 A082P43.5pR Hybrid aspen plasmid lib... 64 7e-009
gb|CK317884.1|CK317884 B9P02h09 Populus stem seasonal libra... 62 3e-008
gb|AI165373.1|AI165373 A082p43u Hybrid aspen plasmid librar... 56 2e-006
gb|BI069273.1|BI069273 C034P61U Populus strain T89 leaves P... 50 1e-004
gb|BU816810.1|BU816810 N071F02 Populus bark cDNA library Po... 50 1e-004
gb|CF227459.1|CF227459 PtaD6C1C0105 Poplar cDNA library fro... 50 1e-004
gb|CV244974.1|CV244974 WS0256.B21_C10 PT-MB-N-A-15 Populus ... 50 1e-004
gb|CN521463.1|CN521463 GQ0111.B3_E11 GQ011 Populus trichoca... 48 4e-004
gb|AJ767775.1|AJ767775 AJ767775 Populus euphratica leaf adu... 48 4e-004
gb|CF228195.1|CF228195 PtaXM0010A9A0901 Poplar cDNA library... 42 0.025
gb|AJ776489.1|AJ776489 AJ776489 Populus euphratica root 3-6... 42 0.025
gb|CK098703.1|CK098703 A026P17.5pR Hybrid aspen plasmid lib... 40 0.10
gb|BP931581.1|BP931581 BP931581 full-length enriched poplar... 38 0.40
>gb|DN494269.1|DN494269 K019P78.5pR Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA clone K019P78 5', mRNA sequence
Length = 588
Score = 127 bits (64), Expect = 6e-028
Identities = 256/320 (80%)
Strand = Plus / Plus
Query: 36 tggtgcatgagagcgccaagattggagaaggttgtctgattggtcctgatgtcgccattg 95
||||| |||||| |||||||||||||| |||||| ||||||| |||||||| || || |
Sbjct: 199 tggtggatgagactgccaagattggagagggttgtttgattggacctgatgttgcaatag 258
Query: 96 gacctgggtgtgttgtggaggacggcgtgaggctttcccgctgcactgtcatgcgcggcg 155
|||| || || |||| ||| || || || || || || ||| |||| ||||| || |
Sbjct: 259 gaccaggatgcattgttgagtctggagttagactctctcgttgctctgtgatgcgtggag 318
Query: 156 tgcgtatcaagaagcatgcttgcatctcaaacagcattatcggctggcactcaactgttg 215
| || |||||||||||||||||||| || | ||| || ||||| |||||||| || ||||
Sbjct: 319 ttcgcatcaagaagcatgcttgcatatctagcagtatcatcggatggcactccaccgttg 378
Query: 216 gtcaatgggcacggatagagaatatgactatcctgggggaggatgttcatgtgtgtgatg 275
| |||||||| || ||||||| | || ||||| || || ||||||||||| |||||||
Sbjct: 379 ggcaatgggcccgtgtagagaacttaacaatcctcggagaagatgttcatgtttgtgatg 438
Query: 276 aggtgtacagcaatggcggtgttgttctcccacataaagagatcaagtcaagcattctga 335
| | |||||||| || ||||| ||| | || || ||||||||||| ||||||||| |||
Sbjct: 439 aaatttacagcaacggaggtgtggttttaccccacaaagagatcaaatcaagcattttga 498
Query: 336 agcctgagatcgtcatgtga 355
|||| ||||| || ||||||
Sbjct: 499 agccagagatagttatgtga 518
>gb|BU893572.1|BU893572 P079E11 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 582
Score = 125 bits (63), Expect = 2e-027
Identities = 255/319 (79%)
Strand = Plus / Plus
Query: 37 ggtgcatgagagcgccaagattggagaaggttgtctgattggtcctgatgtcgccattgg 96
|||| |||||| |||||||||||||| |||||| ||||||| |||||||| || || ||
Sbjct: 1 ggtggatgagactgccaagattggagagggttgtttgattggacctgatgttgcaatagg 60
Query: 97 acctgggtgtgttgtggaggacggcgtgaggctttcccgctgcactgtcatgcgcggcgt 156
||| || || |||| ||| || || || || || || ||| |||| ||||| || ||
Sbjct: 61 accaggatgcattgttgagtctggagttagactctctcgttgctctgtgatgcgtggagt 120
Query: 157 gcgtatcaagaagcatgcttgcatctcaaacagcattatcggctggcactcaactgttgg 216
|| |||||||||||||||||||| || | ||| || ||||| |||||||| || |||||
Sbjct: 121 tcgcatcaagaagcatgcttgcatatctagcagtatcatcggatggcactccaccgttgg 180
Query: 217 tcaatgggcacggatagagaatatgactatcctgggggaggatgttcatgtgtgtgatga 276
|||||||| || ||||||| | || ||||| || || ||||||||||| ||||||||
Sbjct: 181 gcaatgggcccgtgtagagaacttaacaatcctcggagaagatgttcatgtttgtgatga 240
Query: 277 ggtgtacagcaatggcggtgttgttctcccacataaagagatcaagtcaagcattctgaa 336
| |||||||| || ||||| ||| | || || ||||||||||| ||||||||| ||||
Sbjct: 241 aatttacagcaacggaggtgtggttttaccccacaaagagatcaaatcaagcattttgaa 300
Query: 337 gcctgagatcgtcatgtga 355
||| ||||| || ||||||
Sbjct: 301 gccagagatagttatgtga 319
>gb|BU896882.1|BU896882 X047C09 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 580
Score = 123 bits (62), Expect = 9e-027
Identities = 248/310 (80%)
Strand = Plus / Plus
Query: 36 tggtgcatgagagcgccaagattggagaaggttgtctgattggtcctgatgtcgccattg 95
||||| |||||| |||||||||||||| |||||| ||||||| |||||||| || || |
Sbjct: 143 tggtggatgagactgccaagattggagagggttgtttgattggacctgatgttgcaatag 202
Query: 96 gacctgggtgtgttgtggaggacggcgtgaggctttcccgctgcactgtcatgcgcggcg 155
|||| || || |||| ||| || || || || || || ||| |||| ||||| || |
Sbjct: 203 gaccaggatgcattgttgagtctggagttagactctctcgttgctctgtgatgcgtggag 262
Query: 156 tgcgtatcaagaagcatgcttgcatctcaaacagcattatcggctggcactcaactgttg 215
| || |||||||||||||||||||| || | ||| || ||||| |||||||| || ||||
Sbjct: 263 ttcgcatcaagaagcatgcttgcatatctagcagtatcatcggatggcactccaccgttg 322
Query: 216 gtcaatgggcacggatagagaatatgactatcctgggggaggatgttcatgtgtgtgatg 275
| |||||||| || ||||||| | || ||||| || || ||||||||||| |||||||
Sbjct: 323 ggcaatgggcccgtgtagagaacttaacaatcctcggagaagatgttcatgtttgtgatg 382
Query: 276 aggtgtacagcaatggcggtgttgttctcccacataaagagatcaagtcaagcattctga 335
| | |||||||| || ||||| ||| | || || ||||||||||| ||||||||| |||
Sbjct: 383 aaatttacagcaacggaggtgtggttttaccccacaaagagatcaaatcaagcattttga 442
Query: 336 agcctgagat 345
|||| |||||
Sbjct: 443 agccagagat 452
>gb|CN520831.1|CN520831 GQ0108.B3_C09 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0108_C09 5', mRNA sequence
Length = 810
Score = 119 bits (60), Expect = 1e-025
Identities = 255/320 (79%)
Strand = Plus / Plus
Query: 36 tggtgcatgagagcgccaagattggagaaggttgtctgattggtcctgatgtcgccattg 95
||||| |||||| |||||||||||||| |||||| ||||||| |||||||| || || |
Sbjct: 260 tggtggatgagactgccaagattggagagggttgtttgattggacctgatgttgcaatag 319
Query: 96 gacctgggtgtgttgtggaggacggcgtgaggctttcccgctgcactgtcatgcgcggcg 155
|||| || || |||| ||| || || || || || || ||| |||| ||||| || |
Sbjct: 320 gaccaggatgcattgttgagtctggagttagactctctcgttgctctgtgatgcgtggag 379
Query: 156 tgcgtatcaagaagcatgcttgcatctcaaacagcattatcggctggcactcaactgttg 215
| || |||||||||||||||||||| || | ||| || ||||| |||||||| || ||||
Sbjct: 380 ttcgcatcaagaagcatgcttgcatatctagcagtatcatcggatggcactccaccgttg 439
Query: 216 gtcaatgggcacggatagagaatatgactatcctgggggaggatgttcatgtgtgtgatg 275
| |||||||| || ||||||| | || ||||| || || ||||| ||||| |||||||
Sbjct: 440 ggcaatgggcccgtgtagagaacttaacaatcctcggagaagatgtccatgtttgtgatg 499
Query: 276 aggtgtacagcaatggcggtgttgttctcccacataaagagatcaagtcaagcattctga 335
| | |||||||| || ||||| ||| | || || ||||||||||| ||||||||| |||
Sbjct: 500 aaatttacagcaacggaggtgtggttttaccccacaaagagatcaaatcaagcattttga 559
Query: 336 agcctgagatcgtcatgtga 355
|||| ||||| || ||||||
Sbjct: 560 agccagagattgttatgtga 579
>gb|CK319456.1|CK319456 X9P11a03 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 343
Score = 119 bits (60), Expect = 1e-025
Identities = 255/320 (79%)
Strand = Plus / Plus
Query: 36 tggtgcatgagagcgccaagattggagaaggttgtctgattggtcctgatgtcgccattg 95
||||| |||||| |||||||||||||| |||||| ||||||| |||||||| || || |
Sbjct: 15 tggtggatgagactgccaagattggagagggttgtttgattggacctgatgttgcaatag 74
Query: 96 gacctgggtgtgttgtggaggacggcgtgaggctttcccgctgcactgtcatgcgcggcg 155
|||| || || |||| ||| || || || || || || ||| |||| ||||| || |
Sbjct: 75 gaccaggatgcattgttgagtctggagttagactctctcgttgctctgtgatgcgtggag 134
Query: 156 tgcgtatcaagaagcatgcttgcatctcaaacagcattatcggctggcactcaactgttg 215
| || |||||||||||||||||||| || | ||| || ||||| |||||||| || ||||
Sbjct: 135 ttcgcatcaagaagcatgcttgcatatctagcagtatcatcggatggcactccaccgttg 194
Query: 216 gtcaatgggcacggatagagaatatgactatcctgggggaggatgttcatgtgtgtgatg 275
| |||||||| || ||||||| | || ||||| || || ||||| ||||| |||||||
Sbjct: 195 ggcaatgggcccgtgtagagaacttaacaatcctcggagaagatgtccatgtttgtgatg 254
Query: 276 aggtgtacagcaatggcggtgttgttctcccacataaagagatcaagtcaagcattctga 335
| | |||||||| || ||||| ||| | || || ||||||||||| ||||||||| |||
Sbjct: 255 aaatttacagcaacggaggtgtggttttaccccacaaagagatcaaatcaagcattttga 314
Query: 336 agcctgagatcgtcatgtga 355
|||| ||||| || ||||||
Sbjct: 315 agccagagatagttatgtga 334
>gb|CV243493.1|CV243493 WS0252.B21_A11 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0252_A11 3', mRNA sequence
Length = 837
Score = 119 bits (60), Expect = 1e-025
Identities = 255/320 (79%)
Strand = Plus / Minus
Query: 36 tggtgcatgagagcgccaagattggagaaggttgtctgattggtcctgatgtcgccattg 95
||||| |||||| |||||||||||||| |||||| ||||||| |||||||| || || |
Sbjct: 586 tggtggatgagactgccaagattggagagggttgtttgattggacctgatgttgcaatag 527
Query: 96 gacctgggtgtgttgtggaggacggcgtgaggctttcccgctgcactgtcatgcgcggcg 155
|||| || || |||| ||| || || || || || || ||| |||| ||||| || |
Sbjct: 526 gaccaggatgcattgttgagtctggagttagactctctcgttgctctgtgatgcgtggag 467
Query: 156 tgcgtatcaagaagcatgcttgcatctcaaacagcattatcggctggcactcaactgttg 215
| || |||||||||||||||||||| || | ||| || ||||| |||||||| || ||||
Sbjct: 466 ttcgcatcaagaagcatgcttgcatatctagcagtatcatcggatggcactccaccgttg 407
Query: 216 gtcaatgggcacggatagagaatatgactatcctgggggaggatgttcatgtgtgtgatg 275
| |||||||| || ||||||| | || ||||| || || ||||| ||||| |||||||
Sbjct: 406 ggcaatgggcccgtgtagagaacttaacaatcctcggagaagatgtccatgtttgtgatg 347
Query: 276 aggtgtacagcaatggcggtgttgttctcccacataaagagatcaagtcaagcattctga 335
| | |||||||| || ||||| ||| | || || ||||||||||| ||||||||| |||
Sbjct: 346 aaatttacagcaacggaggtgtggttttaccccacaaagagatcaaatcaagcattttga 287
Query: 336 agcctgagatcgtcatgtga 355
|||| ||||| || ||||||
Sbjct: 286 agccagagatagttatgtga 267
>gb|CV261044.1|CV261044 WS02015.B21_L08 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02015_L08 3', mRNA sequence
Length = 891
Score = 119 bits (60), Expect = 1e-025
Identities = 255/320 (79%)
Strand = Plus / Minus
Query: 36 tggtgcatgagagcgccaagattggagaaggttgtctgattggtcctgatgtcgccattg 95
||||| |||||| |||||||||||||| |||||| ||||||| |||||||| || || |
Sbjct: 587 tggtggatgagactgccaagattggagagggttgtttgattggacctgatgttgcaatag 528
Query: 96 gacctgggtgtgttgtggaggacggcgtgaggctttcccgctgcactgtcatgcgcggcg 155
|||| || || |||| ||| || || || || || || ||| |||| ||||| || |
Sbjct: 527 gaccaggatgcattgttgagtctggagttagactctctcgttgctctgtgatgcgtggag 468
Query: 156 tgcgtatcaagaagcatgcttgcatctcaaacagcattatcggctggcactcaactgttg 215
| || |||||||||||||||||||| || | ||| || ||||| |||||||| || ||||
Sbjct: 467 ttcgcatcaagaagcatgcttgcatatctagcagtatcatcggatggcactccaccgttg 408
Query: 216 gtcaatgggcacggatagagaatatgactatcctgggggaggatgttcatgtgtgtgatg 275
| |||||||| || ||||||| | || ||||| || || ||||| ||||| |||||||
Sbjct: 407 ggcaatgggcccgtgtagagaacttaacaatcctcggagaagatgtccatgtttgtgatg 348
Query: 276 aggtgtacagcaatggcggtgttgttctcccacataaagagatcaagtcaagcattctga 335
| | |||||||| || ||||| ||| | || || ||||||||||| ||||||||| |||
Sbjct: 347 aaatttacagcaacggaggtgtggttttaccccacaaagagatcaaatcaagcattttga 288
Query: 336 agcctgagatcgtcatgtga 355
|||| ||||| || ||||||
Sbjct: 287 agccagagatagttatgtga 268
>gb|CV268494.1|CV268494 WS0205.B21_K08 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0205_K08 3', mRNA sequence
Length = 697
Score = 119 bits (60), Expect = 1e-025
Identities = 255/320 (79%)
Strand = Plus / Minus
Query: 36 tggtgcatgagagcgccaagattggagaaggttgtctgattggtcctgatgtcgccattg 95
||||| |||||| |||||||||||||| |||||| ||||||| |||||||| || || |
Sbjct: 577 tggtggatgagactgccaagattggagagggttgtttgattggacctgatgttgcaatag 518
Query: 96 gacctgggtgtgttgtggaggacggcgtgaggctttcccgctgcactgtcatgcgcggcg 155
|||| || || |||| ||| || || || || || || ||| |||| ||||| || |
Sbjct: 517 gaccaggatgcattgttgagtctggagttagactctctcgttgctctgtgatgcgtggag 458
Query: 156 tgcgtatcaagaagcatgcttgcatctcaaacagcattatcggctggcactcaactgttg 215
| || |||||||||||||||||||| || | ||| || ||||| |||||||| || ||||
Sbjct: 457 ttcgcatcaagaagcatgcttgcatatctagcagtatcatcggatggcactccaccgttg 398
Query: 216 gtcaatgggcacggatagagaatatgactatcctgggggaggatgttcatgtgtgtgatg 275
| |||||||| || ||||||| | || ||||| || || ||||| ||||| |||||||
Sbjct: 397 ggcaatgggcccgtgtagagaacttaacaatcctcggagaagatgtccatgtttgtgatg 338
Query: 276 aggtgtacagcaatggcggtgttgttctcccacataaagagatcaagtcaagcattctga 335
| | |||||||| || ||||| ||| | || || ||||||||||| ||||||||| |||
Sbjct: 337 aaatttacagcaacggaggtgtggttttaccccacaaagagatcaaatcaagcattttga 278
Query: 336 agcctgagatcgtcatgtga 355
|||| ||||| || ||||||
Sbjct: 277 agccagagatagttatgtga 258
>gb|CV272637.1|CV272637 WS0158.B21_D22 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0158_D22 3', mRNA sequence
Length = 763
Score = 119 bits (60), Expect = 1e-025
Identities = 255/320 (79%)
Strand = Plus / Minus
Query: 36 tggtgcatgagagcgccaagattggagaaggttgtctgattggtcctgatgtcgccattg 95
||||| |||||| |||||||||||||| |||||| ||||||| |||||||| || || |
Sbjct: 434 tggtggatgagactgccaagattggagagggttgtttgattggacctgatgttgcaatag 375
Query: 96 gacctgggtgtgttgtggaggacggcgtgaggctttcccgctgcactgtcatgcgcggcg 155
|||| || || |||| ||| || || || || || || ||| |||| ||||| || |
Sbjct: 374 gaccaggatgcattgttgagtctggagttagactctctcgttgctctgtgatgcgtggag 315
Query: 156 tgcgtatcaagaagcatgcttgcatctcaaacagcattatcggctggcactcaactgttg 215
| || |||||||||||||||||||| || | ||| || ||||| |||||||| || ||||
Sbjct: 314 ttcgcatcaagaagcatgcttgcatatctagcagtatcatcggatggcactccaccgttg 255
Query: 216 gtcaatgggcacggatagagaatatgactatcctgggggaggatgttcatgtgtgtgatg 275
| |||||||| || ||||||| | || ||||| || || ||||| ||||| |||||||
Sbjct: 254 ggcaatgggcccgtgtagagaacttaacaatcctcggagaagatgtccatgtttgtgatg 195
Query: 276 aggtgtacagcaatggcggtgttgttctcccacataaagagatcaagtcaagcattctga 335
| | |||||||| || ||||| ||| | || || ||||||||||| ||||||||| |||
Sbjct: 194 aaatttacagcaacggaggtgtggttttaccccacaaagagatcaaatcaagcattttga 135
Query: 336 agcctgagatcgtcatgtga 355
|||| ||||| || ||||||
Sbjct: 134 agccagagatagttatgtga 115
>gb|DT522999.1|DT522999 WS02038.B21_I04 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02038_I04 3', mRNA sequence
Length = 843
Score = 119 bits (60), Expect = 1e-025
Identities = 255/320 (79%)
Strand = Plus / Minus
Query: 36 tggtgcatgagagcgccaagattggagaaggttgtctgattggtcctgatgtcgccattg 95
||||| |||||| |||||||||||||| |||||| ||||||| |||||||| || || |
Sbjct: 587 tggtggatgagactgccaagattggagagggttgtttgattggacctgatgttgcaatag 528
Query: 96 gacctgggtgtgttgtggaggacggcgtgaggctttcccgctgcactgtcatgcgcggcg 155
|||| || || |||| ||| || || || || || || ||| |||| ||||| || |
Sbjct: 527 gaccaggatgcattgttgagtctggagttagactctctcgttgctctgtgatgcgtggag 468
Query: 156 tgcgtatcaagaagcatgcttgcatctcaaacagcattatcggctggcactcaactgttg 215
| || |||||||||||||||||||| || | ||| || ||||| |||||||| || ||||
Sbjct: 467 ttcgcatcaagaagcatgcttgcatatctagcagtatcatcggatggcactccaccgttg 408
Query: 216 gtcaatgggcacggatagagaatatgactatcctgggggaggatgttcatgtgtgtgatg 275
| |||||||| || ||||||| | || ||||| || || ||||| ||||| |||||||
Sbjct: 407 ggcaatgggcccgtgtagagaacttaacaatcctcggagaagatgtccatgtttgtgatg 348
Query: 276 aggtgtacagcaatggcggtgttgttctcccacataaagagatcaagtcaagcattctga 335
| | |||||||| || ||||| ||| | || || ||||||||||| ||||||||| |||
Sbjct: 347 aaatttacagcaacggaggtgtggttttaccccacaaagagatcaaatcaagcattttga 288
Query: 336 agcctgagatcgtcatgtga 355
|||| ||||| || ||||||
Sbjct: 287 agccagagatagttatgtga 268
>gb|BU834125.1|BU834125 T057B09 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 758
Score = 115 bits (58), Expect = 2e-024
Identities = 190/234 (81%)
Strand = Plus / Plus
Query: 125 aggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctca 184
|||||||||||||||||||| ||||| || |||||||||||||||||||| ||||||||
Sbjct: 326 aggctttcccgctgcactgtgatgcggggagtgcgtatcaagaagcatgcatgcatctct 385
Query: 185 aacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatgact 244
| || || || || ||||| || ||||| || |||||| || |||||||| |||||
Sbjct: 386 agtagtatcattggatggcattccactgtggggagatgggctcgcatagagaacatgaca 445
Query: 245 atcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctc 304
||| | || || ||||||||||| | ||||| || ||||| ||||| |||||||| ||
Sbjct: 446 atcttaggagaagatgttcatgttggcgatgaagtttacagtaatgggggtgttgtcctg 505
Query: 305 ccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtgagct 358
|| || || || || ||||| |||||| ||||||| || || ||||||||||||
Sbjct: 506 cctcacaaggaaataaagtctagcattttgaagccagaaattgtcatgtgagct 559
>gb|CK103295.1|CK103295 G111P56.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G111P56 5', mRNA sequence
Length = 548
Score = 115 bits (58), Expect = 2e-024
Identities = 190/234 (81%)
Strand = Plus / Plus
Query: 125 aggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctca 184
|||||||||||||||||||| ||||| || |||||||||||||||||||| ||||||||
Sbjct: 231 aggctttcccgctgcactgtgatgcggggagtgcgtatcaagaagcatgcatgcatctct 290
Query: 185 aacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatgact 244
| || || || || ||||| || ||||| || |||||| || |||||||| |||||
Sbjct: 291 agtagtatcattggatggcattccactgtggggagatgggctcgcatagagaacatgaca 350
Query: 245 atcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctc 304
||| | || || ||||||||||| | ||||| || ||||| ||||| |||||||| ||
Sbjct: 351 atcttaggagaagatgttcatgttggcgatgaagtttacagtaatgggggtgttgtcctg 410
Query: 305 ccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtgagct 358
|| || || || || ||||| |||||| ||||||| || || ||||||||||||
Sbjct: 411 cctcacaaggaaataaagtctagcattttgaagccagaaattgtcatgtgagct 464
>gb|CN523749.1|CN523749 GQ015M11.T3_F10 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M11_F10 5', mRNA sequence
Length = 738
Score = 115 bits (58), Expect = 2e-024
Identities = 254/320 (79%)
Strand = Plus / Minus
Query: 36 tggtgcatgagagcgccaagattggagaaggttgtctgattggtcctgatgtcgccattg 95
||||| |||||| |||||||||||||| |||||| ||||||| |||||||| || || |
Sbjct: 606 tggtggatgagactgccaagattggagagggttgtttgattggacctgatgttgcaatag 547
Query: 96 gacctgggtgtgttgtggaggacggcgtgaggctttcccgctgcactgtcatgcgcggcg 155
|||| || || |||| ||| || || || || || || ||| |||| ||||| || |
Sbjct: 546 gaccaggatgcattgttgagtctggagttagactctctcgttgctctgtgatgcgtggag 487
Query: 156 tgcgtatcaagaagcatgcttgcatctcaaacagcattatcggctggcactcaactgttg 215
| | |||||||||||||||||||| || | ||| || ||||| |||||||| || ||||
Sbjct: 486 tnngcatcaagaagcatgcttgcatatctagcagtatcatcggatggcactccaccgttg 427
Query: 216 gtcaatgggcacggatagagaatatgactatcctgggggaggatgttcatgtgtgtgatg 275
| |||||||| || ||||||| | || ||||| || || ||||| ||||| |||||||
Sbjct: 426 ggcaatgggcccgtgtagagaacttaacaatcctcggagaagatgtccatgtttgtgatg 367
Query: 276 aggtgtacagcaatggcggtgttgttctcccacataaagagatcaagtcaagcattctga 335
| | |||||||| || ||||| ||| | || || ||||||||||| ||||||||| |||
Sbjct: 366 aaatttacagcaacggaggtgtggttttaccccacaaagagatcaaatcaagcattttga 307
Query: 336 agcctgagatcgtcatgtga 355
|||| ||||| || ||||||
Sbjct: 306 agccagagattgttatgtga 287
>gb|CK317839.1|CK317839 B9P02d09 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 642
Score = 113 bits (57), Expect = 8e-024
Identities = 254/320 (79%)
Strand = Plus / Plus
Query: 36 tggtgcatgagagcgccaagattggagaaggttgtctgattggtcctgatgtcgccattg 95
||||| |||||| |||||||||||||| |||||| ||||||| |||||||| || || |
Sbjct: 29 tggtggatgagactgccaagattggagagggttgtttgattggacctgatgttgcaatag 88
Query: 96 gacctgggtgtgttgtggaggacggcgtgaggctttcccgctgcactgtcatgcgcggcg 155
|||| || || |||| ||| || || || || || || ||| |||| ||||| || |
Sbjct: 89 gaccaggatgcattgttgagtctggagttagactctctcgttgctctgtgatgcgtggag 148
Query: 156 tgcgtatcaagaagcatgcttgcatctcaaacagcattatcggctggcactcaactgttg 215
| || |||||||||||||||||||| || | ||| || ||||| |||||||| || ||||
Sbjct: 149 ttcgcatcaagaagcatgcttgcatatctagcagtatcatcggatggcactccaccgttg 208
Query: 216 gtcaatgggcacggatagagaatatgactatcctgggggaggatgttcatgtgtgtgatg 275
| |||||||| || || |||| | || ||||| || || ||||| ||||| |||||||
Sbjct: 209 ggcaatgggcccgtgtanagaacttaacaatcctcggagaagatgtccatgtttgtgatg 268
Query: 276 aggtgtacagcaatggcggtgttgttctcccacataaagagatcaagtcaagcattctga 335
| | |||||||| || ||||| ||| | || || ||||||||||| ||||||||| |||
Sbjct: 269 aaatttacagcaacggaggtgtggttttaccccacaaagagatcaaatcaagcattttga 328
Query: 336 agcctgagatcgtcatgtga 355
|||| ||||| || ||||||
Sbjct: 329 agccagagatagttatgtga 348
>gb|AI167104.1|AI167104 xylem.est.870 Poplar xylem Lambda ZAPII library Populus trichocarpa
cDNA 5', mRNA sequence
Length = 569
Score = 111 bits (56), Expect = 3e-023
Identities = 255/320 (79%), Gaps = 1/320 (0%)
Strand = Plus / Plus
Query: 36 tggtgcatgagagcgccaagattggagaaggttgtctgattggtcctgatgtcgccattg 95
||||| |||||| |||||||||||||| |||||| ||||||| |||||||| || || |
Sbjct: 65 tggtggatgagactgccaagattggagagggttgtttgattggacctgatgttgcaatag 124
Query: 96 gacctgggtgtgttgtggaggacggcgtgaggctttcccgctgcactgtcatgcgcggcg 155
|||| || || |||| ||| || || || || || || ||| |||| ||||| || |
Sbjct: 125 gaccaggatgcattgttgagtctggagttagactctctcgttgctctgtgatgcgtggag 184
Query: 156 tgcgtatcaagaagcatgcttgcatctcaaacagcattatcggctggcactcaactgttg 215
| || |||||||||||||||||||| || | ||| || ||||| |||||||| || ||||
Sbjct: 185 ttcgcatcaagaagcatgcttgcatatctagcagtatcatcggatggcactccaccgttg 244
Query: 216 gtcaatgggcacggatagagaatatgactatcctgggggaggatgttcatgtgtgtgatg 275
| |||||||| || ||||||| | || ||||| || || ||||| ||||| |||||||
Sbjct: 245 ggcaatgggc-cgtgtagagaacttaacaatcctcggagaagatgtccatgtttgtgatg 303
Query: 276 aggtgtacagcaatggcggtgttgttctcccacataaagagatcaagtcaagcattctga 335
| | |||||||| || ||||| ||| | || || ||||||||||| ||||||||| |||
Sbjct: 304 aaatttacagcaacggaggtgtggttttaccccacaaagagatcaaatcaagcattttga 363
Query: 336 agcctgagatcgtcatgtga 355
|||| ||||| || ||||||
Sbjct: 364 agccagagatagttatgtga 383
>gb|CA925749.1|CA925749 MTU7TL.P5.D09 Aspen leaf cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 713
Score = 111 bits (56), Expect = 3e-023
Identities = 254/320 (79%)
Strand = Plus / Minus
Query: 36 tggtgcatgagagcgccaagattggagaaggttgtctgattggtcctgatgtcgccattg 95
||||| |||||| |||||||||||||| |||||| ||||||| |||||||| || || |
Sbjct: 504 tggtggatgagactgccaagattggagagggttgtttgattggacctgatgttgcaatag 445
Query: 96 gacctgggtgtgttgtggaggacggcgtgaggctttcccgctgcactgtcatgcgcggcg 155
|||| || || |||| ||| || || || || || || ||| |||| ||||| || |
Sbjct: 444 gaccaggatgcattgttgagtctggagttagactctctcgttgctctgtgatgcgtggag 385
Query: 156 tgcgtatcaagaagcatgcttgcatctcaaacagcattatcggctggcactcaactgttg 215
| || ||||||||||||||||| || || | ||| || ||||| |||||||| || ||||
Sbjct: 384 ttcgcatcaagaagcatgcttgtatatctagcagtatcatcggatggcactccaccgttg 325
Query: 216 gtcaatgggcacggatagagaatatgactatcctgggggaggatgttcatgtgtgtgatg 275
| |||||||| || ||||||| | || ||||| || || ||||| ||||| |||||||
Sbjct: 324 ggcaatgggcccgtgtagagaacttaacaatcctcggagaagatgtccatgtttgtgatg 265
Query: 276 aggtgtacagcaatggcggtgttgttctcccacataaagagatcaagtcaagcattctga 335
| | |||||||| || ||||| ||| | || || ||||||||||| ||||||||| |||
Sbjct: 264 aaatttacagcaacggaggtgtggttttaccccacaaagagatcaaatcaagcattttga 205
Query: 336 agcctgagatcgtcatgtga 355
|||| ||||| || ||||||
Sbjct: 204 agccagagatagttatgtga 185
>gb|CF233991.1|CF233991 PtaJXO1B11B1103 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 633
Score = 111 bits (56), Expect = 3e-023
Identities = 254/320 (79%)
Strand = Plus / Plus
Query: 36 tggtgcatgagagcgccaagattggagaaggttgtctgattggtcctgatgtcgccattg 95
||||| |||||| |||||||||||||| |||||| ||||||| |||||||| || || |
Sbjct: 10 tggtggatgagactgccaagattggagagggttgtttgattggacctgatgttgcaatag 69
Query: 96 gacctgggtgtgttgtggaggacggcgtgaggctttcccgctgcactgtcatgcgcggcg 155
|||| || || |||| ||| || || || || || || ||| |||| ||||| || |
Sbjct: 70 gaccaggatgcattgttgagtctggagttagactctctcgttgctctgtgatgcgtggag 129
Query: 156 tgcgtatcaagaagcatgcttgcatctcaaacagcattatcggctggcactcaactgttg 215
| || |||||||||||||||||||| || | ||| || ||||| |||||||| || ||||
Sbjct: 130 ttcgcatcaagaagcatgcttgcatatctagcagtatcatcggatggcactccaccgttg 189
Query: 216 gtcaatgggcacggatagagaatatgactatcctgggggaggatgttcatgtgtgtgatg 275
| |||||||| || ||||||| | || ||||| || || ||||| ||||| ||||| |
Sbjct: 190 ggcaatgggcccgtgtagagaacttaacaatcctcggagaagatgtccatgtttgtgacg 249
Query: 276 aggtgtacagcaatggcggtgttgttctcccacataaagagatcaagtcaagcattctga 335
| | |||||||| || ||||| ||| | || || ||||||||||| ||||||||| |||
Sbjct: 250 aaatttacagcaacggaggtgtggttttaccccacaaagagatcaaatcaagcattttga 309
Query: 336 agcctgagatcgtcatgtga 355
|||| ||||| || ||||||
Sbjct: 310 agccagagatagttatgtga 329
>gb|CV255021.1|CV255021 WS02411.B21_N12 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02411_N12 3', mRNA sequence
Length = 902
Score = 111 bits (56), Expect = 3e-023
Identities = 254/320 (79%)
Strand = Plus / Minus
Query: 36 tggtgcatgagagcgccaagattggagaaggttgtctgattggtcctgatgtcgccattg 95
||||| |||||| |||||||||||||| |||||| ||||||| |||||||| || || |
Sbjct: 589 tggtggatgagactgccaagattggagagggttgtttgattggacctgatgttgcaatag 530
Query: 96 gacctgggtgtgttgtggaggacggcgtgaggctttcccgctgcactgtcatgcgcggcg 155
|||| || || |||| ||| || || || || || || ||| |||| ||||| || |
Sbjct: 529 gaccaggatgcattgttgagtctggagttagactctctcgttgctctgtgatgcgtggag 470
Query: 156 tgcgtatcaagaagcatgcttgcatctcaaacagcattatcggctggcactcaactgttg 215
| || ||||||||||||||||||| || | ||| || ||||| |||||||| || ||||
Sbjct: 469 ttcgcgtcaagaagcatgcttgcatatctagcagtatcatcggatggcactccaccgttg 410
Query: 216 gtcaatgggcacggatagagaatatgactatcctgggggaggatgttcatgtgtgtgatg 275
| |||||||| || ||||||| | || ||||| || || ||||| ||||| |||||||
Sbjct: 409 ggcaatgggcccgtgtagagaacttaacaatcctcggagaagatgtccatgtttgtgatg 350
Query: 276 aggtgtacagcaatggcggtgttgttctcccacataaagagatcaagtcaagcattctga 335
| | |||||||| || ||||| ||| | || || ||||||||||| ||||||||| |||
Sbjct: 349 aaatttacagcaacggaggtgtggttttaccccacaaagagatcaaatcaagcattttga 290
Query: 336 agcctgagatcgtcatgtga 355
|||| ||||| || ||||||
Sbjct: 289 agccagagattgttatgtga 270
>gb|BU815980.1|BU815980 N058E11 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 547
Score = 109 bits (55), Expect = 1e-022
Identities = 160/195 (82%)
Strand = Plus / Plus
Query: 161 atcaagaagcatgcttgcatctcaaacagcattatcggctggcactcaactgttggtcaa 220
|||||||||||||||||||| || | ||| || ||||| |||||||| || ||||| |||
Sbjct: 61 atcaagaagcatgcttgcatatctagcagtatcatcggatggcactccaccgttgggcaa 120
Query: 221 tgggcacggatagagaatatgactatcctgggggaggatgttcatgtgtgtgatgaggtg 280
||||| || ||||||| | || ||||| || || ||||||||||| |||||||| |
Sbjct: 121 tgggcccgtgtagagaacttaacaatcctcggagaagatgttcatgtttgtgatgaaatt 180
Query: 281 tacagcaatggcggtgttgttctcccacataaagagatcaagtcaagcattctgaagcct 340
|||||||| || ||||| ||| | || || ||||||||||| ||||||||| |||||||
Sbjct: 181 tacagcaacggaggtgtggttttaccccacaaagagatcaaatcaagcattttgaagcca 240
Query: 341 gagatcgtcatgtga 355
||||| || ||||||
Sbjct: 241 gagatagttatgtga 255
>gb|CK115917.1|CK115917 Y017C02 Populus infected leaf substracted cDNA library Populus
tremula cDNA clone Y017C02 5', mRNA sequence
Length = 531
Score = 109 bits (55), Expect = 1e-022
Identities = 160/195 (82%)
Strand = Plus / Plus
Query: 161 atcaagaagcatgcttgcatctcaaacagcattatcggctggcactcaactgttggtcaa 220
|||||||||||||||||||| || | ||| || ||||| |||||||| || ||||| |||
Sbjct: 65 atcaagaagcatgcttgcatatctagcagtatcatcggatggcactccaccgttgggcaa 124
Query: 221 tgggcacggatagagaatatgactatcctgggggaggatgttcatgtgtgtgatgaggtg 280
||||| || ||||||| | || ||||| || || ||||||||||| |||||||| |
Sbjct: 125 tgggcccgtgtagagaacttaacaatcctcggagaagatgttcatgtttgtgatgaaatt 184
Query: 281 tacagcaatggcggtgttgttctcccacataaagagatcaagtcaagcattctgaagcct 340
|||||||| || ||||| ||| | || || ||||||||||| ||||||||| |||||||
Sbjct: 185 tacagcaacggaggtgtggttttaccccacaaagagatcaaatcaagcattttgaagcca 244
Query: 341 gagatcgtcatgtga 355
||||| || ||||||
Sbjct: 245 gagatagttatgtga 259
>gb|AI162882.1|AI162882 A026P17U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 440
Score = 101 bits (51), Expect = 3e-020
Identities = 160/195 (82%), Gaps = 1/195 (0%)
Strand = Plus / Plus
Query: 161 atcaagaagcatgcttgcatctcaaacagcattatcggctggcactcaactgttggtcaa 220
|||||||||||||||||||| || | ||| || ||||| |||||||| || ||||| |||
Sbjct: 168 atcaagaagcatgcttgcatatctagcagtatcatcggatggcactccaccgttgggcaa 227
Query: 221 tgggcacggatagagaatatgactatcctgggggaggatgttcatgtgtgtgatgaggtg 280
||||| || ||||||| | || ||||| || || ||||||||||| |||||||| |
Sbjct: 228 tgggcccgtgtagagaacttaacaatcctcggagaagatgttcatgtttgtgatgaaat- 286
Query: 281 tacagcaatggcggtgttgttctcccacataaagagatcaagtcaagcattctgaagcct 340
|||||||| || ||||| ||| | || || ||||||||||| ||||||||| |||||||
Sbjct: 287 tacagcaacggaggtgtggttttaccccacaaagagatcaaatcaagcattttgaagcca 346
Query: 341 gagatcgtcatgtga 355
||||| || ||||||
Sbjct: 347 gagatagttatgtga 361
>gb|BP933667.1|BP933667 BP933667 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-055_A07.r 3', mRNA sequence
Length = 473
Score = 101 bits (51), Expect = 3e-020
Identities = 159/195 (81%)
Strand = Plus / Minus
Query: 161 atcaagaagcatgcttgcatctcaaacagcattatcggctggcactcaactgttggtcaa 220
|||||||||||||||||||| || | ||| || ||||| |||||||| || ||||| |||
Sbjct: 461 atcaagaagcatgcttgcatatctaccagtatcatcggatggcactccaccgttgggcaa 402
Query: 221 tgggcacggatagagaatatgactatcctgggggaggatgttcatgtgtgtgatgaggtg 280
||||| || ||||||| | || ||||| || || ||||| ||||| |||||||| |
Sbjct: 401 tgggcccgtgtagagaacttaacaatcctcggagaagatgtccatgtttgtgatgaaatt 342
Query: 281 tacagcaatggcggtgttgttctcccacataaagagatcaagtcaagcattctgaagcct 340
|||||||| || ||||| ||| | || || ||||||||||| ||||||||| |||||||
Sbjct: 341 tacagcaacggaggtgtggttttaccccacaaagagatcaaatcaagcattttgaagcca 282
Query: 341 gagatcgtcatgtga 355
||||| || ||||||
Sbjct: 281 gagatagttatgtga 267
>gb|CK089268.1|CK089268 B007P10.3pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone B007P10 3', mRNA sequence
Length = 800
Score = 95.6 bits (48), Expect = 2e-018
Identities = 252/320 (78%)
Strand = Plus / Minus
Query: 36 tggtgcatgagagcgccaagattggagaaggttgtctgattggtcctgatgtcgccattg 95
||||| |||||| |||||||||||||| |||||| ||||||| |||||||| || || |
Sbjct: 610 tggtggatgagactgccaagattggagagggttgtttgattggacctgatgttgcaatag 551
Query: 96 gacctgggtgtgttgtggaggacggcgtgaggctttcccgctgcactgtcatgcgcggcg 155
|||| || || |||| ||| || || || || | || ||| |||| ||||| || |
Sbjct: 550 gaccaggatgcattgttgagtctggagttagactctagcgttgctctgtgatgcgtggag 491
Query: 156 tgcgtatcaagaagcatgcttgcatctcaaacagcattatcggctggcactcaactgttg 215
| || |||||||||||||||||||| || | ||| || ||||| |||||||| | ||||
Sbjct: 490 ttcgcatcaagaagcatgcttgcatatctagcagtatcatcggatggcactcccccgttg 431
Query: 216 gtcaatgggcacggatagagaatatgactatcctgggggaggatgttcatgtgtgtgatg 275
| |||||||| || || |||| | || ||||| || || ||||||||||| |||||||
Sbjct: 430 ggcaatgggcccgtgtaaagaacttaacaatcctcggagaagatgttcatgtttgtgatg 371
Query: 276 aggtgtacagcaatggcggtgttgttctcccacataaagagatcaagtcaagcattctga 335
| | |||||||| || ||||| ||| | || | ||||||||||| ||||||||| |||
Sbjct: 370 aaatttacagcaacggaggtgtggttttaccccccaaagagatcaaatcaagcattttga 311
Query: 336 agcctgagatcgtcatgtga 355
|||| ||||| || ||||||
Sbjct: 310 agccagagatagttatgtga 291
>gb|AJ767248.1|AJ767248 AJ767248 Populus euphratica leaf adult Populus euphratica cDNA
clone P0000100003F02F1, mRNA sequence
Length = 685
Score = 95.6 bits (48), Expect = 2e-018
Identities = 252/320 (78%)
Strand = Plus / Plus
Query: 36 tggtgcatgagagcgccaagattggagaaggttgtctgattggtcctgatgtcgccattg 95
||||| |||||| |||||||||||||| |||||| |||| || |||||||| || || |
Sbjct: 132 tggtggatgagactgccaagattggagagggttgtttgatcggacctgatgttgctatag 191
Query: 96 gacctgggtgtgttgtggaggacggcgtgaggctttcccgctgcactgtcatgcgcggcg 155
|||| || || |||| ||| || || || || || || ||| |||| ||||| || |
Sbjct: 192 gaccaggatgcattgttgagtctggagttagactctctcgttgctctgtgatgcgtggag 251
Query: 156 tgcgtatcaagaagcatgcttgcatctcaaacagcattatcggctggcactcaactgttg 215
| || |||||||||||||| ||||| || | ||| || || || |||||||| || ||||
Sbjct: 252 ttcgcatcaagaagcatgcctgcatatctagcagtatcattggatggcactccacagttg 311
Query: 216 gtcaatgggcacggatagagaatatgactatcctgggggaggatgttcatgtgtgtgatg 275
| |||||||| || ||||||| | || ||||| || || ||||| ||||| |||||||
Sbjct: 312 ggcaatgggcccgtgtagagaacttaacaatcctcggagaagatgtgcatgtttgtgatg 371
Query: 276 aggtgtacagcaatggcggtgttgttctcccacataaagagatcaagtcaagcattctga 335
| | |||||||| || ||||| ||| | || || ||||||||||| ||||||||| |||
Sbjct: 372 aaatttacagcaacggaggtgtggttttaccccacaaagagatcaaatcaagcattttga 431
Query: 336 agcctgagatcgtcatgtga 355
|||| ||||| || ||||||
Sbjct: 432 agccagagatagttatgtga 451
>gb|BU898025.1|BU898025 X073E11 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 478
Score = 93.7 bits (47), Expect = 8e-018
Identities = 152/187 (81%)
Strand = Plus / Plus
Query: 169 gcatgcttgcatctcaaacagcattatcggctggcactcaactgttggtcaatgggcacg 228
|||||||||||| || | ||| || ||||| |||||||| || ||||| |||||||| ||
Sbjct: 1 gcatgcttgcatatctagcagtatcatcggatggcactccaccgttgggcaatgggcccg 60
Query: 229 gatagagaatatgactatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaa 288
||||||| | || ||||| || || ||||||||||| |||||||| | ||||||||
Sbjct: 61 tgtagagaacttaacgatcctcggagaagatgttcatgtttgtgatgaaatttacagcaa 120
Query: 289 tggcggtgttgttctcccacataaagagatcaagtcaagcattctgaagcctgagatcgt 348
|| ||||| ||| | || || ||||||||||| ||||||||| ||||||| ||||| ||
Sbjct: 121 cggaggtgtggttttaccccacaaagagatcaaatcaagcattttgaagccagagatagt 180
Query: 349 catgtga 355
||||||
Sbjct: 181 tatgtga 187
>gb|CK093203.1|CK093203 G111P56.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G111P56 3', mRNA sequence
Length = 716
Score = 91.7 bits (46), Expect = 3e-017
Identities = 187/234 (79%)
Strand = Plus / Minus
Query: 125 aggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctca 184
|||||||||||||||||||| ||||| || |||||||||||||||||||| |||||||
Sbjct: 388 aggctttcccgctgcactgtgatgcggggagtgcgtatcaagaagcatgcatgcatcttt 329
Query: 185 aacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatgact 244
| || || || || ||||| || ||||| || |||||| || |||||||| ||| |
Sbjct: 328 agtagtatcattggatggcattccactgtggggagatgggctcgcatagagaacatgcca 269
Query: 245 atcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctc 304
||| | || || ||||||||||| | ||||| || ||||| ||||| |||||||| ||
Sbjct: 268 atcttaggagaagatgttcatgttggcgatgaagtttacagtaatgggggtgttgtcctg 209
Query: 305 ccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtgagct 358
|| || || || || |||| |||||| ||||||| || || ||||||||||||
Sbjct: 208 cctcacaaggaaataaagtttagcattttgaagccagaaattgtcatgtgagct 155
>gb|CF119018.1|CF119018 MTU10CS.P12.D11 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 787
Score = 87.7 bits (44), Expect = 5e-016
Identities = 158/196 (80%)
Strand = Plus / Minus
Query: 161 atcaagaagcatgcttgcatctcaaacagcattatcggctggcactcaactgttggtcaa 220
||||||||||| |||||||| || | ||| || ||||| |||||||| ||||| || |
Sbjct: 500 atcaagaagcacgcttgcatatctagcagtatcatcgggtggcactccactgtcgggaga 441
Query: 221 tgggcacggatagagaatatgactatcctgggggaggatgttcatgtgtgtgatgaggtg 280
||||| || ||||||| ||||| ||||| || || ||||| || |||||||| || |
Sbjct: 440 tgggcccgtgtagagaacatgacaatccttggagaagatgtccaagtgtgtgacgaaatt 381
Query: 281 tacagcaatggcggtgttgttctcccacataaagagatcaagtcaagcattctgaagcct 340
||||||||||| ||||| ||| | || || ||||||||||| || |||||| |||||||
Sbjct: 380 tacagcaatggaggtgtggttttaccccacaaagagatcaaatcgagcattttgaagcca 321
Query: 341 gagatcgtcatgtgag 356
||||| || |||||||
Sbjct: 320 gagattgtaatgtgag 305
Score = 63.9 bits (32), Expect = 7e-009
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 36 tggtgcatgagagcgccaagattggagaaggttgtctgattggtcctgatgt 87
||||| |||||| ||||||||||||||| |||||| ||||||| ||||||||
Sbjct: 625 tggtggatgagaccgccaagattggagagggttgtttgattggacctgatgt 574
>gb|CF119541.1|CF119541 MTU10CS.P3.B11 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 590
Score = 87.7 bits (44), Expect = 5e-016
Identities = 158/196 (80%)
Strand = Plus / Minus
Query: 161 atcaagaagcatgcttgcatctcaaacagcattatcggctggcactcaactgttggtcaa 220
||||||||||| |||||||| || | ||| || ||||| |||||||| ||||| || |
Sbjct: 500 atcaagaagcacgcttgcatatctagcagtatcatcgggtggcactccactgtcgggaga 441
Query: 221 tgggcacggatagagaatatgactatcctgggggaggatgttcatgtgtgtgatgaggtg 280
||||| || ||||||| ||||| ||||| || || ||||| || |||||||| || |
Sbjct: 440 tgggcccgtgtagagaacatgacaatccttggagaagatgtccaagtgtgtgacgaaatt 381
Query: 281 tacagcaatggcggtgttgttctcccacataaagagatcaagtcaagcattctgaagcct 340
||||||||||| ||||| ||| | || || ||||||||||| || |||||| |||||||
Sbjct: 380 tacagcaatggaggtgtggttttaccccacaaagagatcaaatcgagcattttgaagcca 321
Query: 341 gagatcgtcatgtgag 356
||||| || |||||||
Sbjct: 320 gagattgtaatgtgag 305
>gb|CF119878.1|CF119878 MTU10CS.P7.D09 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 599
Score = 87.7 bits (44), Expect = 5e-016
Identities = 158/196 (80%)
Strand = Plus / Minus
Query: 161 atcaagaagcatgcttgcatctcaaacagcattatcggctggcactcaactgttggtcaa 220
||||||||||| |||||||| || | ||| || ||||| |||||||| ||||| || |
Sbjct: 500 atcaagaagcacgcttgcatatctagcagtatcatcgggtggcactccactgtcgggaga 441
Query: 221 tgggcacggatagagaatatgactatcctgggggaggatgttcatgtgtgtgatgaggtg 280
||||| || ||||||| ||||| ||||| || || ||||| || |||||||| || |
Sbjct: 440 tgggcccgtgtagagaacatgacaatccttggagaagatgtccaagtgtgtgacgaaatt 381
Query: 281 tacagcaatggcggtgttgttctcccacataaagagatcaagtcaagcattctgaagcct 340
||||||||||| ||||| ||| | || || ||||||||||| || |||||| |||||||
Sbjct: 380 tacagcaatggaggtgtggttttaccccacaaagagatcaaatcgagcattttgaagcca 321
Query: 341 gagatcgtcatgtgag 356
||||| || |||||||
Sbjct: 320 gagattgtaatgtgag 305
>gb|DN484786.1|DN484786 K019P78.3pR Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA clone K019P78 3', mRNA sequence
Length = 449
Score = 87.7 bits (44), Expect = 5e-016
Identities = 128/156 (82%)
Strand = Plus / Minus
Query: 200 tggcactcaactgttggtcaatgggcacggatagagaatatgactatcctgggggaggat 259
|||||||| |||||||| |||||||| || ||||||| | || ||||| || || |||
Sbjct: 406 tggcactccactgttgggcaatgggcccgtgtagagaacttaacaatcctcggagaagat 347
Query: 260 gttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacataaagagatc 319
|||||||| |||||||| | |||||||| || ||||| ||| | || || |||||||||
Sbjct: 346 gttcatgtttgtgatgaaatttacagcaacggaggtgtggttttaccccacaaagagatc 287
Query: 320 aagtcaagcattctgaagcctgagatcgtcatgtga 355
|| ||||||||| ||||||| ||||| || ||||||
Sbjct: 286 aaatcaagcattttgaagccagagatagttatgtga 251
>gb|AI165115.1|AI165115 A075p46u Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 400
Score = 75.8 bits (38), Expect = 2e-012
Identities = 152/190 (80%)
Strand = Plus / Plus
Query: 36 tggtgcatgagagcgccaagattggagaaggttgtctgattggtcctgatgtcgccattg 95
||||| |||||| |||||||||||||| |||||| ||||||| |||||||| || || |
Sbjct: 105 tggtggatgagactgccaagattggagagggttgtttgattggacctgatgttgcaatag 164
Query: 96 gacctgggtgtgttgtggaggacggcgtgaggctttcccgctgcactgtcatgcgcggcg 155
|||| || || |||| ||| || || || || || || ||| |||| ||||| || |
Sbjct: 165 gaccaggatgcattgttgagtctggagttagactctctcgttgctctgtgatgcgtggag 224
Query: 156 tgcgtatcaagaagcatgcttgcatctcaaacagcattatcggctggcactcaactgttg 215
| || |||||||||||||||||||| || | ||| || ||||| |||||||| || ||||
Sbjct: 225 ttcgcatcaagaagcatgcttgcatatctagcagtatcatcggatggcactccaccgttg 284
Query: 216 gtcaatgggc 225
| ||||||||
Sbjct: 285 ggcaatgggc 294
>gb|DT469942.1|DT469942 WS01919.C21_G06 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01919_G06 3', mRNA sequence
Length = 549
Score = 73.8 bits (37), Expect = 7e-012
Identities = 251/321 (78%), Gaps = 1/321 (0%)
Strand = Plus / Plus
Query: 36 tggtgcatgagagcgccaagattggagaaggttgtctgattggtcctgatgtcgccattg 95
||||| |||||| |||||||||||||| |||||| ||||||| |||||||| || ||
Sbjct: 40 tggtggatgagactgccaagattggagagggttgtttgattggacctgatgttgcaataa 99
Query: 96 gacctgggtgtgttgtggaggacggcgtgaggctttcccgctgcactgtcatgcgcggcg 155
|||| || || |||| ||| || || || || || || ||| |||| ||||| || |
Sbjct: 100 gaccaggatgcattgttgagtctggagttagactctctcgttgctctgtgatgcgtggag 159
Query: 156 tgcgtatcaagaagcatgcttgcatctcaaacagcatta-tcggctggcactcaactgtt 214
| || |||||||||||||||||||| || | | | || | |||| |||||||| | |||
Sbjct: 160 ttcgcatcaagaagcatgcttgcatatctagcggtatcaatcggatggcactcctccgtt 219
Query: 215 ggtcaatgggcacggatagagaatatgactatcctgggggaggatgttcatgtgtgtgat 274
|| |||||||| || ||||||| | | ||||| || || ||||| ||||| ||||||
Sbjct: 220 gggcaatgggcccgtgtagagaacttaccaatcctcggagaagatgtccatgtttgtgat 279
Query: 275 gaggtgtacagcaatggcggtgttgttctcccacataaagagatcaagtcaagcattctg 334
|| | |||||||| || ||||| ||| | || || ||||||||||| ||||||||| ||
Sbjct: 280 gaaatttacagcaacggaggtgtggttttaccccacaaagagatcaaatcaagcattttg 339
Query: 335 aagcctgagatcgtcatgtga 355
||||| ||||| || ||||||
Sbjct: 340 aagccggagatagttatgtga 360
>gb|BI130843.1|BI130843 G111P56Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 278
Score = 69.9 bits (35), Expect = 1e-010
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 125 aggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagca 171
|||||||||||||||||||| ||||| || |||||||||||||||||
Sbjct: 232 aggctttcccgctgcactgtgatgcggggagtgcgtatcaagaagca 278
>gb|BU889976.1|BU889976 P029A06 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 475
Score = 65.9 bits (33), Expect = 2e-009
Identities = 144/181 (79%)
Strand = Plus / Plus
Query: 36 tggtgcatgagagcgccaagattggagaaggttgtctgattggtcctgatgtcgccattg 95
||||| |||||| |||||||||||||| |||||| ||||||| |||||||| || || |
Sbjct: 291 tggtggatgagactgccaagattggagagggttgtttgattggacctgatgttgcaatag 350
Query: 96 gacctgggtgtgttgtggaggacggcgtgaggctttcccgctgcactgtcatgcgcggcg 155
|||| || || |||| ||| || || || || || || ||| |||| ||||| || |
Sbjct: 351 gaccaggatgcattgttgagtctggagttagactctctcgttgctctgtgatgcgtggag 410
Query: 156 tgcgtatcaagaagcatgcttgcatctcaaacagcattatcggctggcactcaactgttg 215
| || |||||||||||||||||||| || | ||| || ||||| |||||||| || ||||
Sbjct: 411 ttcgcatcaagaagcatgcttgcatatctagcagtatcatcggatggcactccaccgttg 470
Query: 216 g 216
|
Sbjct: 471 g 471
>gb|CK319636.1|CK319636 B9SP06d09 Populus stem seasonal library Populus deltoides cDNA,
mRNA sequence
Length = 480
Score = 65.9 bits (33), Expect = 2e-009
Identities = 111/137 (81%)
Strand = Plus / Plus
Query: 161 atcaagaagcatgcttgcatctcaaacagcattatcggctggcactcaactgttggtcaa 220
|||||||||||||||||||| || | ||| || ||||| |||||||| || ||||| |||
Sbjct: 343 atcaagaagcatgcttgcatatctagcagtatcatcggatggcactccaccgttgggcaa 402
Query: 221 tgggcacggatagagaatatgactatcctgggggaggatgttcatgtgtgtgatgaggtg 280
||||| || ||||||| | || ||||| || || ||||| ||||| |||||||| |
Sbjct: 403 tgggcccgtgtagagaacttaacaatcctcggagaagatgtccatgtttgtgatgaaatt 462
Query: 281 tacagcaatggcggtgt 297
|||||||| || |||||
Sbjct: 463 tacagcaacggaggtgt 479
>gb|CK099736.1|CK099736 A082P43.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A082P43 5', mRNA sequence
Length = 392
Score = 63.9 bits (32), Expect = 7e-009
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 36 tggtgcatgagagcgccaagattggagaaggttgtctgattggtcctgatgt 87
||||| |||||| ||||||||||||||| |||||| ||||||| ||||||||
Sbjct: 246 tggtggatgagaccgccaagattggagagggttgtttgattggacctgatgt 297
>gb|CK317884.1|CK317884 B9P02h09 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 389
Score = 61.9 bits (31), Expect = 3e-008
Identities = 91/111 (81%)
Strand = Plus / Plus
Query: 245 atcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctc 304
||||| || |||||||| | ||| |||||||| | |||||||| || ||||| ||| |
Sbjct: 26 atcctcggagaggatgtgcgtgtttgtgatgaaatttacagcaacggaggtgtggtttta 85
Query: 305 ccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
|| || ||||||||||| ||||||||| ||||||| ||||| || ||||||
Sbjct: 86 ccccacaaagagatcaaatcaagcattttgaagccagagatagttatgtga 136
>gb|AI165373.1|AI165373 A082p43u Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 417
Score = 56.0 bits (28), Expect = 2e-006
Identities = 47/52 (90%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 36 tggtgcatgagagcgccaagattggagaaggttgtctgattggtcctgatgt 87
||||| |||||| ||||||||||||||| |||||| ||||||| ||||||||
Sbjct: 241 tggtggatgagaccgccaagattggagagggttgtttgattgg-cctgatgt 291
>gb|BI069273.1|BI069273 C034P61U Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 375
Score = 50.1 bits (25), Expect = 1e-004
Identities = 121/153 (79%)
Strand = Plus / Plus
Query: 55 gattggagaaggttgtctgattggtcctgatgtcgccattggacctgggtgtgttgtgga 114
||||||||| |||||| ||||||| |||||||| || || ||||| || || |||| ||
Sbjct: 6 gattggagagggttgtttgattggacctgatgttgcaataggaccaggatgcattgttga 65
Query: 115 ggacggcgtgaggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgc 174
| || || || || || || ||| |||| ||||| || || || ||||||||||||||
Sbjct: 66 gtctggagttagactctctcgttgctctgtgatgcgtggagttcgcatcaagaagcatgc 125
Query: 175 ttgcatctcaaacagcattatcggctggcactc 207
|||||| || | ||| || ||||| ||||||||
Sbjct: 126 ttgcatatctagcagtatcatcggatggcactc 158
>gb|BU816810.1|BU816810 N071F02 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 343
Score = 50.1 bits (25), Expect = 1e-004
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 311 aaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
||||||||||| ||||||||| ||||||| ||||| || ||||||
Sbjct: 27 aaagagatcaaatcaagcattttgaagccagagatagttatgtga 71
>gb|CF227459.1|CF227459 PtaD6C1C0105 Poplar cDNA library from wood tissues Populus alba x
Populus tremula cDNA 5', mRNA sequence
Length = 391
Score = 50.1 bits (25), Expect = 1e-004
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 311 aaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
||||||||||| ||||||||| ||||||| ||||| || ||||||
Sbjct: 28 aaagagatcaaatcaagcattttgaagccagagatagttatgtga 72
>gb|CV244974.1|CV244974 WS0256.B21_C10 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0256_C10 3', mRNA sequence
Length = 364
Score = 50.1 bits (25), Expect = 1e-004
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 311 aaagagatcaagtcaagcattctgaagcctgagatcgtcatgtga 355
||||||||||| ||||||||| ||||||| ||||| || ||||||
Sbjct: 335 aaagagatcaaatcaagcattttgaagccagagatagttatgtga 291
>gb|CN521463.1|CN521463 GQ0111.B3_E11 GQ011 Populus trichocarpa x Populus deltoides cDNA
clone GQ0111_E11 5', mRNA sequence
Length = 260
Score = 48.1 bits (24), Expect = 4e-004
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 36 tggtgcatgagagcgccaagattggagaaggttgtctgattggtcctgatgt 87
||||| |||||| |||||||||||||| |||||| |||| || ||||||||
Sbjct: 4 tggtggatgagactgccaagattggagagggttgtttgatcggacctgatgt 55
Score = 42.1 bits (21), Expect = 0.025
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 161 atcaagaagcatgcttgcatctcaaacagcattatcggctggcactcaactgt 213
||||||||||| |||||||| || | ||| || ||||| |||||||| |||||
Sbjct: 129 atcaagaagcacgcttgcatatctagcagtatcatcgggtggcactccactgt 181
>gb|AJ767775.1|AJ767775 AJ767775 Populus euphratica leaf adult Populus euphratica cDNA
clone P0000100010C07F1, mRNA sequence
Length = 606
Score = 48.1 bits (24), Expect = 4e-004
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 36 tggtgcatgagagcgccaagattggagaaggttgtctgattggtcctgatgt 87
||||| |||||| |||||||||||||| |||||| |||| || ||||||||
Sbjct: 424 tggtggatgagactgccaagattggagagggttgtttgatcggacctgatgt 475
>gb|CF228195.1|CF228195 PtaXM0010A9A0901 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 389
Score = 42.1 bits (21), Expect = 0.025
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 311 aaagagatcaagtcaagcattctgaagcc 339
||||||||||| ||||||||| |||||||
Sbjct: 22 aaagagatcaaatcaagcattttgaagcc 50
>gb|AJ776489.1|AJ776489 AJ776489 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400013H12F1, mRNA sequence
Length = 328
Score = 42.1 bits (21), Expect = 0.025
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 161 atcaagaagcatgcttgcatctcaaacagcattatcggctggcactcaactgt 213
||||||||||| |||||||| || | ||| || ||||| |||||||| |||||
Sbjct: 209 atcaagaagcacgcttgcatatctagcagtatcatcgggtggcactccactgt 261
>gb|CK098703.1|CK098703 A026P17.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A026P17 5', mRNA sequence
Length = 385
Score = 40.1 bits (20), Expect = 0.10
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 161 atcaagaagcatgcttgcat 180
||||||||||||||||||||
Sbjct: 180 atcaagaagcatgcttgcat 199
Score = 38.2 bits (19), Expect = 0.40
Identities = 34/38 (89%), Gaps = 2/38 (5%)
Strand = Plus / Plus
Query: 50 gccaagattggagaaggttgtctgattggtcctgatgt 87
|||||||||||||| ||||| ||||||| ||||||||
Sbjct: 70 gccaagattggagagggttg--tgattggacctgatgt 105
>gb|BP931581.1|BP931581 BP931581 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-024_O10.r 3', mRNA sequence
Length = 340
Score = 38.2 bits (19), Expect = 0.40
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 311 aaagagatcaagtcaagcattctgaagcctgagat 345
||||||||||| ||||||||| |||||| |||||
Sbjct: 327 aaagagatcaaatcaagcatttggaagccagagat 293
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 81,183
Number of Sequences: 369679
Number of extensions: 81183
Number of successful extensions: 21688
Number of sequences better than 0.5: 48
Number of HSP's better than 0.5 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 21599
Number of HSP's gapped (non-prelim): 85
length of query: 638
length of database: 203,408,664
effective HSP length: 19
effective length of query: 619
effective length of database: 196,384,763
effective search space: 121562168297
effective search space used: 121562168297
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)