BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2521825.2.1
(2812 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AJ772709.1|AJ772709 AJ772709 Populus euphratica shoot in... 127 3e-027
gb|BU820207.1|BU820207 UA52DPD12 Populus tremula cambium cD... 113 4e-023
gb|CV237195.1|CV237195 WS01226.B21_L10 PT-GT-FL-A-3 Populus... 109 6e-022
gb|DT472445.1|DT472445 WS01226.BR.1_L10 PT-GT-FL-A-3 Populu... 109 6e-022
gb|BU869509.1|BU869509 M130H07 Populus flower cDNA library ... 101 1e-019
gb|CN519135.1|CN519135 GQ0104.B3_B11 GQ010 Populus trichoca... 101 1e-019
gb|BI136479.1|BI136479 F069P04Y Populus flower cDNA library... 86 9e-015
gb|BI136596.1|BI136596 F070P49Y Populus flower cDNA library... 86 9e-015
gb|BI136597.1|BI136597 F070P51Y Populus flower cDNA library... 86 9e-015
gb|BI137707.1|BI137707 F092P17Y Populus flower cDNA library... 86 9e-015
gb|BU881700.1|BU881700 UM66TD01 Populus flower cDNA library... 86 9e-015
gb|BU881789.1|BU881789 UM67TE08 Populus flower cDNA library... 86 9e-015
gb|CK318876.1|CK318876 X9P04d02 Populus stem seasonal libra... 86 9e-015
gb|AJ769923.1|AJ769923 AJ769923 Populus euphratica leaf 3-6... 86 9e-015
gb|CV130489.1|CV130489 X9P04a01 Populus stem seasonal libra... 86 9e-015
gb|CK106061.1|CK106061 UA52DPD12.5pR Populus dormant cambiu... 82 1e-013
gb|BU826159.1|BU826159 UK117TC08 Populus apical shoot cDNA ... 78 2e-012
gb|AJ780678.1|AJ780678 AJ780678 Populus euphratica leaf 3-6... 74 3e-011
gb|DT488378.1|DT488378 WS02536.B21_E08 PT-MB-N-A-15 Populus... 74 3e-011
gb|CF235657.1|CF235657 PtaJXT0025D8D0808 Poplar cDNA librar... 70 5e-010
gb|BI069710.1|BI069710 C006P40U Populus strain T89 leaves P... 66 8e-009
gb|BI072226.1|BI072226 C071P70U Populus strain T89 leaves P... 66 8e-009
gb|CX169657.1|CX169657 E08_69-98_10.ab1 leaf inoculated wit... 66 8e-009
gb|CK100170.1|CK100170 C006P40.5pR Populus strain T89 leave... 62 1e-007
gb|BU892003.1|BU892003 P058B03 Populus petioles cDNA librar... 58 2e-006
gb|BI135829.1|BI135829 F059P04Y Populus flower cDNA library... 56 8e-006
gb|CK317968.1|CK317968 B9P03h05 Populus stem seasonal libra... 50 5e-004
gb|AJ768076.1|AJ768076 AJ768076 Populus euphratica leaf adu... 44 0.029
gb|AJ777892.1|AJ777892 AJ777892 Populus euphratica root 3-6... 40 0.45
>gb|AJ772709.1|AJ772709 AJ772709 Populus euphratica shoot in vitro plantlet Israel Populus
euphratica cDNA clone P0001700011F11F1, mRNA sequence
Length = 576
Score = 127 bits (64), Expect = 3e-027
Identities = 283/356 (79%)
Strand = Plus / Plus
Query: 1628 tcccagttagcatagttgaacagccgactatcccaaagtttatgataacctctatctccc 1687
||||| |||||||| || || || | ||||||||| | ||||| || |||| ||||||
Sbjct: 93 tcccaattagcataattaaaaagtctactatcccataaattatggtagcctcgatctcca 152
Query: 1688 gcatgaaaataggactcttgggtgctttgtccaacatcatagccatttaaaccatctgtg 1747
| |||||||||||||| || | | ||| |||| ||| | ||||| | |||||| |||
Sbjct: 153 gtgtgaaaataggactcctgagcaccttggccaatgtcaaaaccattgagaccatcagtg 212
Query: 1748 acattattacttgcatggctatggacaacatccatcagaactcgcaaacccaaactgtgt 1807
||||| ||||||||||| || ||| ||||||||||||| || || | |||||| || ||
Sbjct: 213 acattgttacttgcatgactgtgggcaacatccatcaggacacgtagacccaagctatgg 272
Query: 1808 gccttatcaacaagatatttgaggtcctctggtgtgcctgatctgctgctaaccgcaaag 1867
|| ||||||| | ||| |||||||| || || | || |||||||||||||| |||||
Sbjct: 273 gctttatcaattaaatacttgaggtcttcaggatttccagatctgctgctaacagcaaaa 332
Query: 1868 aaatttgtcacatggtacccgaaagaagcatagtacgaatgctccataactgccatcaac 1927
|| ||||| || || || || || || ||||| || |||||||| || |||||||| |
Sbjct: 333 aagtttgtaacgtgataaccaaatgatgcataataggaatgctcgattactgccattagt 392
Query: 1928 tgaactgtgttgtagttatttgctcgtatgcgtggcaacacattgtctgcaaattc 1983
|| |||||||||||||||||||||||||| || ||||| ||||| || ||||||||
Sbjct: 393 tgcactgtgttgtagttatttgctcgtatacgaggcaaaacattatcagcaaattc 448
>gb|BU820207.1|BU820207 UA52DPD12 Populus tremula cambium cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 645
Score = 113 bits (57), Expect = 4e-023
Identities = 234/293 (79%)
Strand = Plus / Minus
Query: 1691 tgaaaataggactcttgggtgctttgtccaacatcatagccatttaaaccatctgtgaca 1750
||||||||||||||||| | | ||| |||| ||| | ||||| | |||||| ||||||
Sbjct: 295 tgaaaataggactcttgagcaccttggccaatgtcaaaaccattgagaccatcagtgaca 236
Query: 1751 ttattacttgcatggctatggacaacatccatcagaactcgcaaacccaaactgtgtgcc 1810
|| ||||||||||| || ||||||||||||||||| || || | |||||| || || ||
Sbjct: 235 ttgttacttgcatgactgtggacaacatccatcaggacacgtagacccaagctatgggct 176
Query: 1811 ttatcaacaagatatttgaggtcctctggtgtgcctgatctgctgctaaccgcaaagaaa 1870
||||||| | ||| |||||||| || || | || |||||||||||||| ||||| ||
Sbjct: 175 ttatcaattaaatacttgaggtcttcaggatttccagatctgctgctaacagcaaaaaag 116
Query: 1871 tttgtcacatggtacccgaaagaagcatagtacgaatgctccataactgccatcaactga 1930
|| || ||||| || || || || ||||| || | |||||| || |||||||| | ||
Sbjct: 115 ttcgtaacatgataaccaaatgatgcataataggtatgctcgattactgccattgattgt 56
Query: 1931 actgtgttgtagttatttgctcgtatgcgtggcaacacattgtctgcaaattc 1983
||||||||||||||||||||| |||| || |||| ||||| || ||||||||
Sbjct: 55 actgtgttgtagttatttgcttgtatacgaggcataacattatcagcaaattc 3
Score = 46.1 bits (23), Expect = 0.007
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 1517 ttgataccatggtgatgatacagcattgatgtaactccatcaaatcggaagccatcaaa 1575
||||| ||||||||||| ||| ||| || || |||||||||||||| || ||||||||
Sbjct: 469 ttgattccatggtgatggtaccacatggaagttactccatcaaatcgaaacccatcaaa 411
>gb|CV237195.1|CV237195 WS01226.B21_L10 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01226_L10 3', mRNA sequence
Length = 846
Score = 109 bits (55), Expect = 6e-022
Identities = 217/271 (80%)
Strand = Plus / Plus
Query: 522 ccacacaggtgcggggcggagaaaggactttgaacgagttcggccggttgttgaagttcg 581
||||||| ||||||| || || || |||||||| ||||| || || |||||||| || |
Sbjct: 495 ccacacatgtgcgggctggcgagagtactttgaaggagttgggacgattgttgaaatttg 554
Query: 582 tttcgggcacccctggcaccccttcaggcgacgtgaagtgatccacgtcgtggccaactc 641
|||| || || ||||| | ||||||||| || ||||| || || | || ||||| ||||
Sbjct: 555 tttcaggtactcctggtatcccttcaggagatgtgaaatggtctgcatcatggcccactc 614
Query: 642 ttccatgtccaccgaagaccagagcatcagagtccagggctactctgtatttcccaggca 701
||||||||||||| || ||| |||||| |||||| || ||||| || ||||||||||
Sbjct: 615 ttccatgtccaccaaattccaaggcatcactgtccagtgcaactctatacttcccaggca 674
Query: 702 aatcgcatcccactttgtagccctcgtaagttttcttgggatggaaattgaaaacaaaaa 761
| || || || || || || || || || ||||||| ||||| |||||||| |||||||
Sbjct: 675 agtcacacccaaccttatacccatcatatgttttctccggatgaaaattgaacacaaaaa 734
Query: 762 ctaaatctccacgttcaaagacaataacctt 792
| | ||||||||| |||||||||||||||||
Sbjct: 735 ccagatctccacgctcaaagacaataacctt 765
>gb|DT472445.1|DT472445 WS01226.BR.1_L10 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01226_L10 5', mRNA sequence
Length = 859
Score = 109 bits (55), Expect = 6e-022
Identities = 217/271 (80%)
Strand = Plus / Minus
Query: 522 ccacacaggtgcggggcggagaaaggactttgaacgagttcggccggttgttgaagttcg 581
||||||| ||||||| || || || |||||||| ||||| || || |||||||| || |
Sbjct: 669 ccacacatgtgcgggctggcgagagtactttgaaggagttgggacgattgttgaaatttg 610
Query: 582 tttcgggcacccctggcaccccttcaggcgacgtgaagtgatccacgtcgtggccaactc 641
|||| || || ||||| | ||||||||| || ||||| || || | || ||||| ||||
Sbjct: 609 tttcaggtactcctggtatcccttcaggagatgtgaaatggtctgcatcatggcccactc 550
Query: 642 ttccatgtccaccgaagaccagagcatcagagtccagggctactctgtatttcccaggca 701
||||||||||||| || ||| |||||| |||||| || ||||| || ||||||||||
Sbjct: 549 ttccatgtccaccaaattccaaggcatcactgtccagtgcaactctatacttcccaggca 490
Query: 702 aatcgcatcccactttgtagccctcgtaagttttcttgggatggaaattgaaaacaaaaa 761
| || || || || || || || || || ||||||| ||||| |||||||| |||||||
Sbjct: 489 agtcacacccaaccttatacccatcatatgttttctccggatgaaaattgaacacaaaaa 430
Query: 762 ctaaatctccacgttcaaagacaataacctt 792
| | ||||||||| |||||||||||||||||
Sbjct: 429 ccagatctccacgctcaaagacaataacctt 399
Score = 69.9 bits (35), Expect = 5e-010
Identities = 104/127 (81%)
Strand = Plus / Minus
Query: 962 ccttctcttggaaagtcaatccattctgggtgaccaaactcatttcccataaaattcaag 1021
|||||||| || ||||||||||| || || || ||||| ||||||||||||||||| | |
Sbjct: 229 ccttctctggggaagtcaatccactcaggatgcccaaattcatttcccataaaattaagg 170
Query: 1022 tagccatcacctccaagggccattgtgatgaagtgaatcatcttttggagtgcaatccct 1081
|| || || || || || ||||| || || || || |||||||| || || |||||||||
Sbjct: 169 tatccctcgccacctagtgccatagttataaaatgtatcatcttatgaagagcaatccct 110
Query: 1082 cgatcaa 1088
|||||||
Sbjct: 109 cgatcaa 103
>gb|BU869509.1|BU869509 M130H07 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 721
Score = 101 bits (51), Expect = 1e-019
Identities = 216/271 (79%)
Strand = Plus / Minus
Query: 522 ccacacaggtgcggggcggagaaaggactttgaacgagttcggccggttgttgaagttcg 581
||||||| ||||||| || || || |||||||| ||||| || || |||||||| || |
Sbjct: 621 ccacacatgtgcgggctggcgagagtactttgaaggagttgggacgattgttgaaatttg 562
Query: 582 tttcgggcacccctggcaccccttcaggcgacgtgaagtgatccacgtcgtggccaactc 641
|||| || || ||||| | ||||||||| || ||||| || || | || ||||| ||||
Sbjct: 561 tttcaggtactcctggtatcccttcaggagatgtgaaatggtctgcatcatggcccactc 502
Query: 642 ttccatgtccaccgaagaccagagcatcagagtccagggctactctgtatttcccaggca 701
||||||||||||| || ||| |||||| |||||| || ||||| || ||||| ||||
Sbjct: 501 ttccatgtccaccaaattccaaggcatcactgtccagtgcaactctatacttcccgggca 442
Query: 702 aatcgcatcccactttgtagccctcgtaagttttcttgggatggaaattgaaaacaaaaa 761
| || || || || || || || || || ||||||| ||||| |||||||| |||||||
Sbjct: 441 agtcacacccaaccttatacccatcatatgttttctccggatgaaaattgaacacaaaaa 382
Query: 762 ctaaatctccacgttcaaagacaataacctt 792
| | ||||||||| |||||||||||||||||
Sbjct: 381 ccagatctccacgctcaaagacaataacctt 351
Score = 69.9 bits (35), Expect = 5e-010
Identities = 104/127 (81%)
Strand = Plus / Minus
Query: 962 ccttctcttggaaagtcaatccattctgggtgaccaaactcatttcccataaaattcaag 1021
|||||||| || ||||||||||| || || || ||||| ||||||||||||||||| | |
Sbjct: 181 ccttctctggggaagtcaatccactcaggatgcccaaattcatttcccataaaattaagg 122
Query: 1022 tagccatcacctccaagggccattgtgatgaagtgaatcatcttttggagtgcaatccct 1081
|| || || || || || ||||| || || || || |||||||| || || |||||||||
Sbjct: 121 tatccctcgccacctagtgccatagttataaaatgtatcatcttatgaagagcaatccct 62
Query: 1082 cgatcaa 1088
|||||||
Sbjct: 61 cgatcaa 55
>gb|CN519135.1|CN519135 GQ0104.B3_B11 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0104_B11 5', mRNA sequence
Length = 489
Score = 101 bits (51), Expect = 1e-019
Identities = 216/271 (79%)
Strand = Plus / Minus
Query: 522 ccacacaggtgcggggcggagaaaggactttgaacgagttcggccggttgttgaagttcg 581
||||||| ||||||| || || || |||||||| ||||| || || |||||||| || |
Sbjct: 296 ccacacatgtgcgggctggcgagagtactttgaaggagttgggacgattgttgaaatttg 237
Query: 582 tttcgggcacccctggcaccccttcaggcgacgtgaagtgatccacgtcgtggccaactc 641
|||| || || ||||| | ||||||||| || ||||| || || | || ||||| ||||
Sbjct: 236 tttcaggtactcctggtatcccttcaggagatgtgaaatggtctgcatcatggcccactc 177
Query: 642 ttccatgtccaccgaagaccagagcatcagagtccagggctactctgtatttcccaggca 701
||||||||||||| || ||| |||||| |||||| || ||||| || ||||| ||||
Sbjct: 176 ttccatgtccaccaaattccaaggcatcactgtccagtgcaactctatacttcccgggca 117
Query: 702 aatcgcatcccactttgtagccctcgtaagttttcttgggatggaaattgaaaacaaaaa 761
| || || || || || || || || || ||||||| ||||| |||||||| |||||||
Sbjct: 116 agtcacacccaaccttatacccatcatatgttttctccggatgaaaattgaacacaaaaa 57
Query: 762 ctaaatctccacgttcaaagacaataacctt 792
| | ||||||||| |||||||||||||||||
Sbjct: 56 ccagatctccacgctcaaagacaataacctt 26
>gb|BI136479.1|BI136479 F069P04Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 321
Score = 85.7 bits (43), Expect = 9e-015
Identities = 100/119 (84%)
Strand = Plus / Minus
Query: 1115 gacatgccagtgtacatttccttgtccatcaggagaaatgcaatagttttgtcgccaaca 1174
|||||||||| |||||||| || |||||||||| || |||||||| ||||| || |||
Sbjct: 167 gacatgccagaatacatttctttatccatcaggatgaaggcaatagtcttgtcacctaca 108
Query: 1175 atagactgatcatggctctcagcatatgcgatgcatttttcagtatatctcctgttagt 1233
|| ||||| ||||||||||| ||||| || | ||||| |||||||||||||| |||||
Sbjct: 107 atggactggtcatggctctcggcataagcaacacatttctcagtatatctcctattagt 49
Score = 69.9 bits (35), Expect = 5e-010
Identities = 104/127 (81%)
Strand = Plus / Minus
Query: 962 ccttctcttggaaagtcaatccattctgggtgaccaaactcatttcccataaaattcaag 1021
|||||||| || ||||||||||| || || || ||||| ||||||||||||||||| | |
Sbjct: 320 ccttctctggggaagtcaatccactcaggatgcccaaattcatttcccataaaattaagg 261
Query: 1022 tagccatcacctccaagggccattgtgatgaagtgaatcatcttttggagtgcaatccct 1081
|| || || || || || ||||| || || || || |||||||| || || |||||||||
Sbjct: 260 tatccctctccacctagtgccatagttataaaatgtatcatcttatgaagagcaatccct 201
Query: 1082 cgatcaa 1088
|||||||
Sbjct: 200 cgatcaa 194
>gb|BI136596.1|BI136596 F070P49Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 498
Score = 85.7 bits (43), Expect = 9e-015
Identities = 100/119 (84%)
Strand = Plus / Minus
Query: 1115 gacatgccagtgtacatttccttgtccatcaggagaaatgcaatagttttgtcgccaaca 1174
|||||||||| |||||||| || |||||||||| || |||||||| ||||| || |||
Sbjct: 167 gacatgccagaatacatttctttatccatcaggatgaaggcaatagtcttgtcacctaca 108
Query: 1175 atagactgatcatggctctcagcatatgcgatgcatttttcagtatatctcctgttagt 1233
|| ||||| ||||||||||| ||||| || | ||||| |||||||||||||| |||||
Sbjct: 107 atggactggtcatggctctcggcataagcaacacatttctcagtatatctcctattagt 49
Score = 69.9 bits (35), Expect = 5e-010
Identities = 104/127 (81%)
Strand = Plus / Minus
Query: 962 ccttctcttggaaagtcaatccattctgggtgaccaaactcatttcccataaaattcaag 1021
|||||||| || ||||||||||| || || || ||||| ||||||||||||||||| | |
Sbjct: 320 ccttctctggggaagtcaatccactcaggatgcccaaattcatttcccataaaattaagg 261
Query: 1022 tagccatcacctccaagggccattgtgatgaagtgaatcatcttttggagtgcaatccct 1081
|| || || || || || ||||| || || || || |||||||| || || |||||||||
Sbjct: 260 tatccctcgccacctagtgccatagttataaaatgtatcatcttatgaagagcaatccct 201
Query: 1082 cgatcaa 1088
|||||||
Sbjct: 200 cgatcaa 194
>gb|BI136597.1|BI136597 F070P51Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 388
Score = 85.7 bits (43), Expect = 9e-015
Identities = 100/119 (84%)
Strand = Plus / Minus
Query: 1115 gacatgccagtgtacatttccttgtccatcaggagaaatgcaatagttttgtcgccaaca 1174
|||||||||| |||||||| || |||||||||| || |||||||| ||||| || |||
Sbjct: 167 gacatgccagaatacatttctttatccatcaggatgaaggcaatagtcttgtcacctaca 108
Query: 1175 atagactgatcatggctctcagcatatgcgatgcatttttcagtatatctcctgttagt 1233
|| ||||| ||||||||||| ||||| || | ||||| |||||||||||||| |||||
Sbjct: 107 atggactggtcatggctctcggcataagcaacacatttctcagtatatctcctattagt 49
Score = 69.9 bits (35), Expect = 5e-010
Identities = 104/127 (81%)
Strand = Plus / Minus
Query: 962 ccttctcttggaaagtcaatccattctgggtgaccaaactcatttcccataaaattcaag 1021
|||||||| || ||||||||||| || || || ||||| ||||||||||||||||| | |
Sbjct: 320 ccttctctggggaagtcaatccactcaggatgcccaaattcatttcccataaaattaagg 261
Query: 1022 tagccatcacctccaagggccattgtgatgaagtgaatcatcttttggagtgcaatccct 1081
|| || || || || || ||||| || || || || |||||||| || || |||||||||
Sbjct: 260 tatccctcgccacctagtgccatagttataaaatgtatcatcttatgaagagcaatccct 201
Query: 1082 cgatcaa 1088
|||||||
Sbjct: 200 cgatcaa 194
>gb|BI137707.1|BI137707 F092P17Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 429
Score = 85.7 bits (43), Expect = 9e-015
Identities = 100/119 (84%)
Strand = Plus / Minus
Query: 1115 gacatgccagtgtacatttccttgtccatcaggagaaatgcaatagttttgtcgccaaca 1174
|||||||||| |||||||| || |||||||||| || |||||||| ||||| || |||
Sbjct: 167 gacatgccagcatacatttctttatccatcaggatgaaggcaatagtcttgtcacctaca 108
Query: 1175 atagactgatcatggctctcagcatatgcgatgcatttttcagtatatctcctgttagt 1233
|| ||||| ||||||||||| ||||| || | ||||| |||||||||||||| |||||
Sbjct: 107 atggactggtcatggctctcggcataagcaacacatttctcagtatatctcctattagt 49
Score = 69.9 bits (35), Expect = 5e-010
Identities = 104/127 (81%)
Strand = Plus / Minus
Query: 962 ccttctcttggaaagtcaatccattctgggtgaccaaactcatttcccataaaattcaag 1021
|||||||| || ||||||||||| || || || ||||| ||||||||||||||||| | |
Sbjct: 320 ccttctctggggaagtcaatccactcaggatgcccaaattcatttcccataaaattaagg 261
Query: 1022 tagccatcacctccaagggccattgtgatgaagtgaatcatcttttggagtgcaatccct 1081
|| || || || || || ||||| || || || || |||||||| || || |||||||||
Sbjct: 260 tatccctcgccacctagtgccatagttataaaatgtatcatcttatgaagagcaatccct 201
Query: 1082 cgatcaa 1088
|||||||
Sbjct: 200 cgatcaa 194
>gb|BU881700.1|BU881700 UM66TD01 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 534
Score = 85.7 bits (43), Expect = 9e-015
Identities = 100/119 (84%)
Strand = Plus / Minus
Query: 1115 gacatgccagtgtacatttccttgtccatcaggagaaatgcaatagttttgtcgccaaca 1174
|||||||||| |||||||| || |||||||||| || |||||||| ||||| || |||
Sbjct: 369 gacatgccagaatacatttctttatccatcaggatgaaggcaatagtcttgtcacctaca 310
Query: 1175 atagactgatcatggctctcagcatatgcgatgcatttttcagtatatctcctgttagt 1233
|| ||||| ||||||||||| ||||| || | ||||| |||||||||||||| |||||
Sbjct: 309 atggactggtcatggctctcggcataagcaacacatttctcagtatatctcctattagt 251
Score = 63.9 bits (32), Expect = 3e-008
Identities = 103/127 (81%)
Strand = Plus / Minus
Query: 962 ccttctcttggaaagtcaatccattctgggtgaccaaactcatttcccataaaattcaag 1021
|||||||| || ||||||||||| || || || ||| | ||||||||||||||||| | |
Sbjct: 522 ccttctctggggaagtcaatccactcaggatgcccanattcatttcccataaaattaagg 463
Query: 1022 tagccatcacctccaagggccattgtgatgaagtgaatcatcttttggagtgcaatccct 1081
|| || || || || || ||||| || || || || |||||||| || || |||||||||
Sbjct: 462 tatccctcgccacctagtgccatagttataaaatgtatcatcttatgaagagcaatccct 403
Query: 1082 cgatcaa 1088
|||||||
Sbjct: 402 cgatcaa 396
Score = 63.9 bits (32), Expect = 3e-008
Identities = 110/136 (80%)
Strand = Plus / Minus
Query: 1283 ttcaggtagtcaatccatctatcagggatagccattgccaggcgatagtcaaacccaacc 1342
|||| ||| ||||||||| | |||||||| |||||||||||||| |||||||| |||||
Sbjct: 201 ttcaagtaatcaatccatttgtcagggatggccattgccaggcggtagtcaaatccaact 142
Query: 1343 ccaccttcatcaactggccggcaaaggaccggcatgcctgaaacatcttcagcaacaaca 1402
|| || ||| ||||| | | ||| | ||||| || |||||||||||||||| ||
Sbjct: 141 cccccctcagagactggacaaccaagtccaggcataccagaaacatcttcagcaatcact 82
Query: 1403 gttgcttctggcaaga 1418
||||| ||||||||||
Sbjct: 81 gttgcatctggcaaga 66
>gb|BU881789.1|BU881789 UM67TE08 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 625
Score = 85.7 bits (43), Expect = 9e-015
Identities = 100/119 (84%)
Strand = Plus / Minus
Query: 1115 gacatgccagtgtacatttccttgtccatcaggagaaatgcaatagttttgtcgccaaca 1174
|||||||||| |||||||| || |||||||||| || |||||||| ||||| || |||
Sbjct: 375 gacatgccagaatacatttctttatccatcaggatgaaggcaatagtcttgtcacctaca 316
Query: 1175 atagactgatcatggctctcagcatatgcgatgcatttttcagtatatctcctgttagt 1233
|| ||||| ||||||||||| ||||| || | ||||| |||||||||||||| |||||
Sbjct: 315 atggactggtcatggctctcggcataagcaacacatttctcagtatatctcctattagt 257
Score = 63.9 bits (32), Expect = 3e-008
Identities = 103/127 (81%)
Strand = Plus / Minus
Query: 962 ccttctcttggaaagtcaatccattctgggtgaccaaactcatttcccataaaattcaag 1021
|||||||| || ||||||||||| || || || ||| | ||||||||||||||||| | |
Sbjct: 528 ccttctctggggaagtcaatccactcaggatgcccanattcatttcccataaaattaagg 469
Query: 1022 tagccatcacctccaagggccattgtgatgaagtgaatcatcttttggagtgcaatccct 1081
|| || || || || || ||||| || || || || |||||||| || || |||||||||
Sbjct: 468 tatccctcgccacctagtgccatagttataaaatgtatcatcttatgaagagcaatccct 409
Query: 1082 cgatcaa 1088
|||||||
Sbjct: 408 cgatcaa 402
Score = 63.9 bits (32), Expect = 3e-008
Identities = 110/136 (80%)
Strand = Plus / Minus
Query: 1283 ttcaggtagtcaatccatctatcagggatagccattgccaggcgatagtcaaacccaacc 1342
|||| ||| ||||||||| | |||||||| |||||||||||||| |||||||| |||||
Sbjct: 207 ttcaagtaatcaatccatttgtcagggatggccattgccaggcggtagtcaaatccaact 148
Query: 1343 ccaccttcatcaactggccggcaaaggaccggcatgcctgaaacatcttcagcaacaaca 1402
|| || ||| ||||| | | ||| | ||||| || |||||||||||||||| ||
Sbjct: 147 cccccctcagagactggacaaccaagtccaggcataccagaaacatcttcagcaatcact 88
Query: 1403 gttgcttctggcaaga 1418
||||| ||||||||||
Sbjct: 87 gttgcatctggcaaga 72
>gb|CK318876.1|CK318876 X9P04d02 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 759
Score = 85.7 bits (43), Expect = 9e-015
Identities = 100/119 (84%)
Strand = Plus / Minus
Query: 1115 gacatgccagtgtacatttccttgtccatcaggagaaatgcaatagttttgtcgccaaca 1174
|||||||||| |||||||| || |||||||||| || |||||||| ||||| || |||
Sbjct: 458 gacatgccagaatacatttctttatccatcaggatgaaggcaatagtcttgtcacctaca 399
Query: 1175 atagactgatcatggctctcagcatatgcgatgcatttttcagtatatctcctgttagt 1233
|| ||||| ||||||||||| ||||| || | ||||| |||||||||||||| |||||
Sbjct: 398 atggactggtcatggctctcggcataagcaacacatttctcagtatatctcctattagt 340
Score = 69.9 bits (35), Expect = 5e-010
Identities = 104/127 (81%)
Strand = Plus / Minus
Query: 962 ccttctcttggaaagtcaatccattctgggtgaccaaactcatttcccataaaattcaag 1021
|||||||| || ||||||||||| || || || ||||| ||||||||||||||||| | |
Sbjct: 611 ccttctctggggaagtcaatccactcaggatgcccaaattcatttcccataaaattaagg 552
Query: 1022 tagccatcacctccaagggccattgtgatgaagtgaatcatcttttggagtgcaatccct 1081
|| || || || || || ||||| || || || || |||||||| || || |||||||||
Sbjct: 551 tatccctcgccacctagtgccatagttataaaatgtatcatcttatgaagagcaatccct 492
Query: 1082 cgatcaa 1088
|||||||
Sbjct: 491 cgatcaa 485
Score = 63.9 bits (32), Expect = 3e-008
Identities = 110/136 (80%)
Strand = Plus / Minus
Query: 1283 ttcaggtagtcaatccatctatcagggatagccattgccaggcgatagtcaaacccaacc 1342
|||| ||| ||||||||| | |||||||| |||||||||||||| |||||||| |||||
Sbjct: 290 ttcaagtaatcaatccatttgtcagggatggccattgccaggcggtagtcaaatccaact 231
Query: 1343 ccaccttcatcaactggccggcaaaggaccggcatgcctgaaacatcttcagcaacaaca 1402
|| || ||| ||||| | | ||| | ||||| || |||||||||||||||| ||
Sbjct: 230 cccccctcagagactggacaaccaagtccaggcataccagaaacatcttcagcaatcact 171
Query: 1403 gttgcttctggcaaga 1418
||||| ||||||||||
Sbjct: 170 gttgcatctggcaaga 155
Score = 48.1 bits (24), Expect = 0.002
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 1524 catggtgatgatacagcattgatgtaactccatcaaatcg 1563
|||||||||| |||||||| || || ||||||||||||||
Sbjct: 49 catggtgatggtacagcatagaagttactccatcaaatcg 10
>gb|AJ769923.1|AJ769923 AJ769923 Populus euphratica leaf 3-6 months, adult Populus euphratica
cDNA clone P0001100004F03F1, mRNA sequence
Length = 604
Score = 85.7 bits (43), Expect = 9e-015
Identities = 100/119 (84%)
Strand = Plus / Plus
Query: 1115 gacatgccagtgtacatttccttgtccatcaggagaaatgcaatagttttgtcgccaaca 1174
|||||||||| |||||||| || |||||||||| || |||| ||| ||||| || |||
Sbjct: 308 gacatgccagaatacatttctttatccatcaggatgaaggcaagagtcttgtcacctaca 367
Query: 1175 atagactgatcatggctctcagcatatgcgatgcatttttcagtatatctcctgttagt 1233
|| ||||||||||||||||| ||||| || | ||||| |||||||||||||| |||||
Sbjct: 368 atggactgatcatggctctcggcataagcaacacatttctcagtatatctcctattagt 426
Score = 69.9 bits (35), Expect = 5e-010
Identities = 104/127 (81%)
Strand = Plus / Plus
Query: 962 ccttctcttggaaagtcaatccattctgggtgaccaaactcatttcccataaaattcaag 1021
|||||||| || ||||||||||| || || || ||||| ||||||||||||||||| | |
Sbjct: 155 ccttctctggggaagtcaatccactcaggatgcccaaattcatttcccataaaattaagg 214
Query: 1022 tagccatcacctccaagggccattgtgatgaagtgaatcatcttttggagtgcaatccct 1081
|| || ||||| || || ||||| || || | || |||||||| || || |||||||||
Sbjct: 215 tatccctcaccacctagtgccatagttatagaatgtatcatcttatgaagagcaatccct 274
Query: 1082 cgatcaa 1088
|||||||
Sbjct: 275 cgatcaa 281
Score = 61.9 bits (31), Expect = 1e-007
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 1283 ttcaggtagtcaatccatctatcagggatagccattgccaggcgatagtcaaacccaac 1341
|||||||| |||||||| | |||||||| |||||||||||||| |||||||| |||||
Sbjct: 476 ttcaggtaatcaatccacttgtcagggatggccattgccaggcggtagtcaaatccaac 534
>gb|CV130489.1|CV130489 X9P04a01 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 791
Score = 85.7 bits (43), Expect = 9e-015
Identities = 100/119 (84%)
Strand = Plus / Minus
Query: 1115 gacatgccagtgtacatttccttgtccatcaggagaaatgcaatagttttgtcgccaaca 1174
|||||||||| |||||||| || |||||||||| || |||||||| ||||| || |||
Sbjct: 624 gacatgccagaatacatttctttatccatcaggatgaaggcaatagtcttgtcacctaca 565
Query: 1175 atagactgatcatggctctcagcatatgcgatgcatttttcagtatatctcctgttagt 1233
|| ||||| ||||||||||| ||||| || | ||||| |||||||||||||| |||||
Sbjct: 564 atggactggtcatggctctcggcataagcaacacatttctcagtatatctcctattagt 506
Score = 63.9 bits (32), Expect = 3e-008
Identities = 101/124 (81%)
Strand = Plus / Minus
Query: 965 tctcttggaaagtcaatccattctgggtgaccaaactcatttcccataaaattcaagtag 1024
||||| || ||||||||||| || || || ||||| ||||||||||||||||| | |||
Sbjct: 774 tctctggggaagtcaatccactcaggatgcccaaattcatttcccataaaattaaggtat 715
Query: 1025 ccatcacctccaagggccattgtgatgaagtgaatcatcttttggagtgcaatccctcga 1084
|| || || || || ||||| || || || || |||||||| || || ||||||||||||
Sbjct: 714 ccctcgccacctagtgccatagttataaaatgtatcatcttatgaagagcaatccctcga 655
Query: 1085 tcaa 1088
||||
Sbjct: 654 tcaa 651
Score = 63.9 bits (32), Expect = 3e-008
Identities = 110/136 (80%)
Strand = Plus / Minus
Query: 1283 ttcaggtagtcaatccatctatcagggatagccattgccaggcgatagtcaaacccaacc 1342
|||| ||| ||||||||| | |||||||| |||||||||||||| |||||||| |||||
Sbjct: 456 ttcaagtaatcaatccatttgtcagggatggccattgccaggcggtagtcaaatccaact 397
Query: 1343 ccaccttcatcaactggccggcaaaggaccggcatgcctgaaacatcttcagcaacaaca 1402
|| || ||| ||||| | | ||| | ||||| || |||||||||||||||| ||
Sbjct: 396 cccccctcagagactggacaaccaagtccaggcataccagaaacatcttcagcaatcact 337
Query: 1403 gttgcttctggcaaga 1418
||||| ||||||||||
Sbjct: 336 gttgcatctggcaaga 321
Score = 61.9 bits (31), Expect = 1e-007
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 1517 ttgataccatggtgatgatacagcattgatgtaactccatcaaatcggaagccatcaaa 1575
||||| ||||||||||| |||||||| || || |||||||||||||| || ||||||||
Sbjct: 222 ttgattccatggtgatggtacagcatagaagttactccatcaaatcgaaacccatcaaa 164
>gb|CK106061.1|CK106061 UA52DPD12.5pR Populus dormant cambium cDNA library Populus tremula
cDNA clone UA52DPD12 5', mRNA sequence
Length = 171
Score = 81.8 bits (41), Expect = 1e-013
Identities = 104/125 (83%)
Strand = Plus / Minus
Query: 1847 gatctgctgctaaccgcaaagaaatttgtcacatggtacccgaaagaagcatagtacgaa 1906
||||||||||| || ||||| || || || ||||| || || || || ||||| || |||
Sbjct: 149 gatctgctgcttacagcaaaaaagttcgtaacatgataaccaaatgatgcataataggaa 90
Query: 1907 tgctccataactgccatcaactgaactgtgttgtagttatttgctcgtatgcgtggcaac 1966
||||| || |||||||| || || |||||||||||||||||||||||||| || |||||
Sbjct: 89 tgctcgattactgccattaattgtactgtgttgtagttatttgctcgtatacgaggcaaa 30
Query: 1967 acatt 1971
|||||
Sbjct: 29 acatt 25
>gb|BU826159.1|BU826159 UK117TC08 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 568
Score = 77.8 bits (39), Expect = 2e-012
Identities = 99/119 (83%)
Strand = Plus / Minus
Query: 1115 gacatgccagtgtacatttccttgtccatcaggagaaatgcaatagttttgtcgccaaca 1174
|||||||||| |||||||| || |||||||||| || ||||| || ||||| || |||
Sbjct: 368 gacatgccagaatacatttctttatccatcaggatgaaggcaatggtcttgtcacctaca 309
Query: 1175 atagactgatcatggctctcagcatatgcgatgcatttttcagtatatctcctgttagt 1233
|| ||||| ||||||||||| ||||| || | ||||| |||||||||||||| |||||
Sbjct: 308 atggactggtcatggctctcggcataagcaacacatttctcagtatatctcctattagt 250
Score = 63.9 bits (32), Expect = 3e-008
Identities = 110/136 (80%)
Strand = Plus / Minus
Query: 1283 ttcaggtagtcaatccatctatcagggatagccattgccaggcgatagtcaaacccaacc 1342
|||| ||| ||||||||| | |||||||| |||||||||||||| |||||||| |||||
Sbjct: 200 ttcaagtaatcaatccatttgtcagggatggccattgccaggcggtagtcaaatccaact 141
Query: 1343 ccaccttcatcaactggccggcaaaggaccggcatgcctgaaacatcttcagcaacaaca 1402
|| || ||| ||||| | | ||| | ||||| || |||||||||||||||| ||
Sbjct: 140 cccccctcagagactggacaaccaagtccaggcataccagaaacatcttcagcaatcact 81
Query: 1403 gttgcttctggcaaga 1418
||||| ||||||||||
Sbjct: 80 gttgcatctggcaaga 65
Score = 48.1 bits (24), Expect = 0.002
Identities = 72/88 (81%)
Strand = Plus / Minus
Query: 1001 tcatttcccataaaattcaagtagccatcacctccaagggccattgtgatgaagtgaatc 1060
||||||||||||||||| | || || || ||||| || ||||| || || || || |||
Sbjct: 482 tcatttcccataaaattaagatatccctcgcctcctagtgccatagttataaaatgtatc 423
Query: 1061 atcttttggagtgcaatccctcgatcaa 1088
||||| || || ||||||||||||||||
Sbjct: 422 atcttatgaagagcaatccctcgatcaa 395
>gb|AJ780678.1|AJ780678 AJ780678 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0000900011B06F1, mRNA sequence
Length = 218
Score = 73.8 bits (37), Expect = 3e-011
Identities = 130/161 (80%)
Strand = Plus / Plus
Query: 632 tggccaactcttccatgtccaccgaagaccagagcatcagagtccagggctactctgtat 691
||||| ||||||||||||||||| || ||| |||||| |||||| || ||||| ||
Sbjct: 43 tggcccactcttccatgtccaccaaattccaaggcatcactgtccagcgcaactctatac 102
Query: 692 ttcccaggcaaatcgcatcccactttgtagccctcgtaagttttcttgggatggaaattg 751
||||| |||| || || || || || || || || || ||||||| ||||| ||||||
Sbjct: 103 ttccctggcaggtcacacccaaccttatacccatcatatgttttctccggatgaaaattg 162
Query: 752 aaaacaaaaactaaatctccacgttcaaagacaataacctt 792
|| |||||||| | ||||||||| |||||||||||||||||
Sbjct: 163 aacacaaaaaccagatctccacgctcaaagacaataacctt 203
>gb|DT488378.1|DT488378 WS02536.B21_E08 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02536_E08 3', mRNA sequence
Length = 912
Score = 73.8 bits (37), Expect = 3e-011
Identities = 211/269 (78%)
Strand = Plus / Plus
Query: 1517 ttgataccatggtgatgatacagcattgatgtaactccatcaaatcggaagccatcaaac 1576
||||| ||||||||||| |||| ||| || || |||||||||||||| || ||||||||
Sbjct: 606 ttgattccatggtgatggtacaacatggaagttactccatcaaatcgaaacccatcaaat 665
Query: 1577 atgaattcatccaaccaatatctcaggttagaaagaagaaaccttaatacctcccagtta 1636
|||| || || | ||| |||||| ||| || | ||||| | | || ||||| |||
Sbjct: 666 ttgaactcctcaagccaccatctcaagttggataacagaaagcgaagaacttcccaatta 725
Query: 1637 gcatagttgaacagccgactatcccaaagtttatgataacctctatctcccgcatgaaaa 1696
||||| || || || | ||| ||||| | ||||| || |||| |||||| | ||||||
Sbjct: 726 gcataattaaaaagtctactgtcccataaattatggtagcctcgatctccagtgtgaaaa 785
Query: 1697 taggactcttgggtgctttgtccaacatcatagccatttaaaccatctgtgacattatta 1756
||||||||||| | | ||| |||| ||| | ||||| | |||||| |||||||| |||
Sbjct: 786 taggactcttgagcaccttggccaatgtcaaaaccattgagaccatcagtgacattgtta 845
Query: 1757 cttgcatggctatggacaacatccatcag 1785
|||||||| || |||||||||||||||||
Sbjct: 846 cttgcatgactgtggacaacatccatcag 874
>gb|CF235657.1|CF235657 PtaJXT0025D8D0808 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 767
Score = 69.9 bits (35), Expect = 5e-010
Identities = 209/268 (77%)
Strand = Plus / Minus
Query: 522 ccacacaggtgcggggcggagaaaggactttgaacgagttcggccggttgttgaagttcg 581
||||||| ||||||| || || || |||||||| ||||| || || |||||||| || |
Sbjct: 326 ccacacatgtgcgggctggcgagagtactttgaaggagttgggacgattgttgaaatttg 267
Query: 582 tttcgggcacccctggcaccccttcaggcgacgtgaagtgatccacgtcgtggccaactc 641
|||| || || ||||| | ||||||||| || ||||| || | | |||||||| ||||
Sbjct: 266 tttcaggtactcctggtatcccttcaggagatgtgaaatggtgtgcatcgtggcccactc 207
Query: 642 ttccatgtccaccgaagaccagagcatcagagtccagggctactctgtatttcccaggca 701
||| | ||||| || ||| |||||| |||||| || ||||| || ||||| ||||
Sbjct: 206 ttcnaannccaccaaattccaaggcatcactgtccagtgcaactctatacttcccgggca 147
Query: 702 aatcgcatcccactttgtagccctcgtaagttttcttgggatggaaattgaaaacaaaaa 761
| || || || || || || || || || ||||||| ||||| |||||||| |||||||
Sbjct: 146 agtcacacccaaccttatacccatcatatgttttctccggatgaaaattgaacacaaaaa 87
Query: 762 ctaaatctccacgttcaaagacaataac 789
| | ||||||||| ||||||||||||||
Sbjct: 86 ccagatctccacgctcaaagacaataac 59
>gb|BI069710.1|BI069710 C006P40U Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 372
Score = 65.9 bits (33), Expect = 8e-009
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 968 cttggaaagtcaatccattctgggtgaccaaactcatttcccataaaattcaa 1020
||||| || |||||||| || ||||| ||||||||||||||||||||||||||
Sbjct: 302 cttgggaaatcaatccactcagggtgtccaaactcatttcccataaaattcaa 250
>gb|BI072226.1|BI072226 C071P70U Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 279
Score = 65.9 bits (33), Expect = 8e-009
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 968 cttggaaagtcaatccattctgggtgaccaaactcatttcccataaaattcaa 1020
||||| || |||||||| || ||||| ||||||||||||||||||||||||||
Sbjct: 218 cttgggaaatcaatccactcagggtgtccaaactcatttcccataaaattcaa 166
>gb|CX169657.1|CX169657 E08_69-98_10.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 625
Score = 65.9 bits (33), Expect = 8e-009
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 968 cttggaaagtcaatccattctgggtgaccaaactcatttcccataaaattcaa 1020
||||| || |||||||| || ||||| ||||||||||||||||||||||||||
Sbjct: 544 cttgggaaatcaatccactcagggtgtccaaactcatttcccataaaattcaa 492
>gb|CK100170.1|CK100170 C006P40.5pR Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA clone C006P40 5', mRNA sequence
Length = 508
Score = 61.9 bits (31), Expect = 1e-007
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 968 cttggaaagtcaatccattctgggtgaccaaactcatttcccataaaattc 1018
||||| || |||||||| || ||||| ||||||||||||||||||||||||
Sbjct: 295 cttgggaaatcaatccactcagggtgtccaaactcatttcccataaaattc 245
>gb|BU892003.1|BU892003 P058B03 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 447
Score = 58.0 bits (29), Expect = 2e-006
Identities = 107/133 (80%)
Strand = Plus / Minus
Query: 522 ccacacaggtgcggggcggagaaaggactttgaacgagttcggccggttgttgaagttcg 581
||||||| ||||||| || || || |||||||| ||||| || || |||||||| || |
Sbjct: 161 ccacacatgtgcgggctggcgagagtactttgaaggagttgggacgattgttgaaatttg 102
Query: 582 tttcgggcacccctggcaccccttcaggcgacgtgaagtgatccacgtcgtggccaactc 641
|||| || || ||||| | ||||||||| || ||||| || || | || ||||| ||||
Sbjct: 101 tttcaggtactcctggtatcccttcaggagatgtgaaatggtctgcatcatggcccactc 42
Query: 642 ttccatgtccacc 654
|||||||||||||
Sbjct: 41 ttccatgtccacc 29
>gb|BI135829.1|BI135829 F059P04Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 238
Score = 56.0 bits (28), Expect = 8e-006
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 962 ccttctcttggaaagtcaatccattctgggtgaccaaactcatttcccataaaatt 1017
|||||||| || ||||||||||| || || || ||||| |||||||||||||||||
Sbjct: 87 ccttctctggggaagtcaatccactcaggatgcccaaattcatttcccataaaatt 32
>gb|CK317968.1|CK317968 B9P03h05 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 544
Score = 50.1 bits (25), Expect = 5e-004
Identities = 106/133 (79%)
Strand = Plus / Minus
Query: 522 ccacacaggtgcggggcggagaaaggactttgaacgagttcggccggttgttgaagttcg 581
||||||| ||||||| || || || |||||||| ||||| || || |||||||| || |
Sbjct: 278 ccacacatgtgcgggctggcgagagtactttgaaggagttgggacgattgttgaaatttg 219
Query: 582 tttcgggcacccctggcaccccttcaggcgacgtgaagtgatccacgtcgtggccaactc 641
|||| || || ||||| | ||||||||| || ||||| || || | || ||||| |||
Sbjct: 218 tttcaggtactcctggtatcccttcaggagatgtgaaatggtctgcatcatggcccactt 159
Query: 642 ttccatgtccacc 654
|||||||||||||
Sbjct: 158 ttccatgtccacc 146
>gb|AJ768076.1|AJ768076 AJ768076 Populus euphratica leaf adult Populus euphratica cDNA clone
P0000100013G12F1, mRNA sequence
Length = 666
Score = 44.1 bits (22), Expect = 0.029
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 1862 gcaaagaaatttgtcacatggtacccgaaagaagcatagtacgaatgctc 1911
||||| |||||||| ||||||||||| ||| |||||| || ||||||||
Sbjct: 300 gcaaaaaaatttgtgacatggtacccaaaactagcataatatgaatgctc 251
>gb|AJ777892.1|AJ777892 AJ777892 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400036F05F1, mRNA sequence
Length = 501
Score = 40.1 bits (20), Expect = 0.45
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 1384 aacatcttcagcaacaacagttgcttct 1411
|||| ||||||||||| |||||||||||
Sbjct: 310 aacaccttcagcaacagcagttgcttct 283
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 334,820
Number of Sequences: 369679
Number of extensions: 334820
Number of successful extensions: 92223
Number of sequences better than 0.5: 29
Number of HSP's better than 0.5 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92121
Number of HSP's gapped (non-prelim): 83
length of query: 2812
length of database: 203,408,664
effective HSP length: 20
effective length of query: 2792
effective length of database: 196,015,084
effective search space: 547274114528
effective search space used: 547274114528
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)