BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2478398.2.5
(1385 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU884119.1|BU884119 R006B07 Populus root cDNA library Po... 285 2e-075
gb|CX655055.1|CX655055 PO01004C07 Poplar SC cDNA library Po... 281 3e-074
gb|CV256227.1|CV256227 WS0243.B21_E14 PTxD-ICC-N-A-14 Popul... 276 2e-072
gb|CV280148.1|CV280148 WS0135.B21_A14 PTxD-IL-FL-A-4 Populu... 276 2e-072
gb|CX656379.1|CX656379 PO01001B08 Poplar SC cDNA library Po... 274 8e-072
gb|DT488868.1|DT488868 WS02537.B21_K16 PT-MB-N-A-15 Populus... 250 1e-064
gb|DT488933.1|DT488933 WS02537.B21_N13 PT-MB-N-A-15 Populus... 242 3e-062
gb|CV245071.1|CV245071 WS0256.B21_G13 PT-MB-N-A-15 Populus ... 238 5e-061
gb|DT515781.1|DT515781 WS02429.B21.1_I03 PTxD-ICC-N-A-14 Po... 232 3e-059
gb|CV283287.1|CV283287 WS0186.B21_O21 PTxD-IL-N-A-9 Populus... 226 2e-057
gb|BU831078.1|BU831078 T016H09 Populus apical shoot cDNA li... 192 2e-047
gb|AJ777153.1|AJ777153 AJ777153 Populus euphratica root 3-6... 190 1e-046
gb|DT503000.1|DT503000 WS0135.BR_A14 PTxD-IL-FL-A-4 Populus... 180 9e-044
gb|BU886401.1|BU886401 R045A05 Populus root cDNA library Po... 176 1e-042
gb|CV282917.1|CV282917 WS0185.B21_P04 PTxD-IL-N-A-9 Populus... 174 6e-042
gb|DN500080.1|DN500080 UB14CPE07.5pR Populus active cambium... 174 6e-042
gb|CK090790.1|CK090790 F025P07.3pR Populus flower cDNA libr... 168 4e-040
gb|CX172891.1|CX172891 D07_69-73_07.ab1 leaf inoculated wit... 161 9e-038
gb|DT511080.1|DT511080 WS02429.BR_I03 PTxD-ICC-N-A-14 Popul... 155 5e-036
gb|BI120916.1|BI120916 F025P07Y Populus flower cDNA library... 151 8e-035
gb|BI121646.1|BI121646 F043P37Y Populus flower cDNA library... 147 1e-033
gb|CX659721.1|CX659721 PO01013B11 Poplar SC cDNA library Po... 141 8e-032
gb|BU833637.1|BU833637 T050F09 Populus apical shoot cDNA li... 137 1e-030
gb|CV231383.1|CV231383 WS0194.B21_G03 PT-DX-N-A-10 Populus ... 133 2e-029
gb|BU870987.1|BU870987 Q025F05 Populus flower cDNA library ... 131 8e-029
gb|AJ772236.1|AJ772236 AJ772236 Populus euphratica shoot in... 131 8e-029
gb|CV232622.1|CV232622 WS0198.B21_C22 PT-DX-N-A-10 Populus ... 131 8e-029
gb|DT473198.1|DT473198 WS01228.BR_O04 PT-GT-FL-A-3 Populus ... 131 8e-029
gb|CF237076.1|CF237076 PtajxtjxoF4F0412 Poplar cDNA library... 127 1e-027
gb|AI162104.1|AI162104 A012P24U Hybrid aspen plasmid librar... 115 5e-024
gb|BU881112.1|BU881112 UM58TG08 Populus flower cDNA library... 115 5e-024
gb|CV266058.1|CV266058 WS02028.B21_P24 PTxN-IB-N-A-11 Popul... 115 5e-024
gb|CV233095.1|CV233095 WS0199.B21_J21 PT-DX-N-A-10 Populus ... 109 3e-022
gb|BI138468.1|BI138468 F107P19Y Populus flower cDNA library... 100 3e-019
gb|BU817230.1|BU817230 UA14CPE01 Populus tremula cambium cD... 96 4e-018
gb|CK088378.1|CK088378 A050P79.3pR Hybrid aspen plasmid lib... 90 3e-016
gb|DT470772.1|DT470772 WS01210.BR_M22 PT-GT-FL-A-3 Populus ... 86 4e-015
gb|CX182094.1|CX182094 E09_45-67_09.ab1 leaf inoculated wit... 66 4e-009
gb|BU832704.1|BU832704 T037C08 Populus apical shoot cDNA li... 58 9e-007
gb|CK092746.1|CK092746 G093P46.3pR Populus tension wood cDN... 58 9e-007
gb|BU871450.1|BU871450 Q030G04 Populus flower cDNA library ... 50 2e-004
gb|BU898310.1|BU898310 X078F06 Populus wood cDNA library Po... 50 2e-004
gb|BP929350.1|BP929350 BP929350 full-length enriched poplar... 40 0.22
>gb|BU884119.1|BU884119 R006B07 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 760
Score = 285 bits (144), Expect = 2e-075
Identities = 402/488 (82%)
Strand = Plus / Plus
Query: 390 gatgttagtggctctgatggagaagacacctcgtggatttcatggtattgcaacttaaga 449
||||||||||| || |||||||| || || |||||||| |||||| |||||| |||||
Sbjct: 266 gatgttagtggttccgatggagatgagacgtcgtggatcacatggttttgcaatctaaga 325
Query: 450 gggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttcaacctttgt 509
|||||||| ||||| |||||||| |||||||| ||||| ||||| || || ||||| |||
Sbjct: 326 gggaatgaattcttttgtgaagttgatgatgattacatacaagatgattttaacctctgt 385
Query: 510 ggcctcagcagccaagttccttattatgattatgctctcgatctcattttagatattgaa 569
|| | ||||| |||||||| || || |||||||| || ||| | ||||| |||||||||
Sbjct: 386 gggttaagcagtcaagttccatactacgattatgcccttgatttgattttggatattgaa 445
Query: 570 tcatctcatggtgatatgttcactgaggaacaaaatgagctcggagaatcagctgcagag 629
|| |||||||||||||||||||| |||||||| ||||| | | ||||| || ||||||
Sbjct: 446 tcctctcatggtgatatgttcacagaggaacagaatgaattggttgaatctgcagcagag 505
Query: 630 atgctttatgggctgatccatgcacgatacattctgaccagtaaaggactggctgcaatg 689
||||||||||| |||| ||||| ||||| || ||| ||| ||||| |||| || |||
Sbjct: 506 atgctttatggattgattcatgctcgatatatattgagcagcaaagggatggcagctatg 565
Query: 690 ctggagaagtataagaactatgactttgggcggtgcccgcgtgtttactgctgtggtcaa 749
||||||||||| || |||||||||||||| | ||||| | |||||||||||||| |||
Sbjct: 566 ctggagaagtacaaaaactatgactttggaagatgcccaagagtttactgctgtggacaa 625
Query: 750 ccatgcctgccagttggacaatcagacatccatcgatctagtaccgtgaagatatactgc 809
|| ||||| |||||||| ||||||||||| | ||| || || || || || |||| ||||
Sbjct: 626 ccttgccttccagttggtcaatcagacattcctcggtcaagcactgttaaaatatgctgc 685
Query: 810 cccaagtgtgaagacatctactacccacggtccaagtaccaaggcaacatcgacggcgca 869
|||| ||||| || || ||||||||||| |||||||| ||||||||||| || || |||
Sbjct: 686 cccagatgtgatgatatatactacccacgttccaagtatcaaggcaacattgatggagca 745
Query: 870 tactttgg 877
|| |||||
Sbjct: 746 tattttgg 753
>gb|CX655055.1|CX655055 PO01004C07 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01004C07 5', mRNA sequence
Length = 702
Score = 281 bits (142), Expect = 3e-074
Identities = 388/470 (82%)
Strand = Plus / Plus
Query: 390 gatgttagtggctctgatggagaagacacctcgtggatttcatggtattgcaacttaaga 449
||||||||||| ||||||||||| ||||| || ||||| ||||||| |||||| || ||
Sbjct: 204 gatgttagtggttctgatggagatgacacatcttggatctcatggttttgcaatttgcga 263
Query: 450 gggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttcaacctttgt 509
|| ||||| || ||||||||||| |||||||| |||||||| || || || || ||||||
Sbjct: 264 ggaaatgaatttttctgtgaagttgatgatgagtacattcaggatgattttaatctttgt 323
Query: 510 ggcctcagcagccaagttccttattatgattatgctctcgatctcattttagatattgaa 569
|| || ||||| |||||||| || |||||||||||||| ||||| || || ||| |||||
Sbjct: 324 ggactgagcagtcaagttccatactatgattatgctcttgatcttatattggatgttgaa 383
Query: 570 tcatctcatggtgatatgttcactgaggaacaaaatgagctcggagaatcagctgcagag 629
|| ||||||||||||||||||||||| ||||| |||||| | | ||||| || ||||||
Sbjct: 384 tcttctcatggtgatatgttcactgaagaacagaatgagttggtggaatctgcagcagag 443
Query: 630 atgctttatgggctgatccatgcacgatacattctgaccagtaaaggactggctgcaatg 689
|||||||| || || || |||| || ||||| || || || || || || ||||||||
Sbjct: 444 atgctttacggtcttattcatgtgcgttacatacttactagcaaggggatgtctgcaatg 503
Query: 690 ctggagaagtataagaactatgactttgggcggtgcccgcgtgtttactgctgtggtcaa 749
|||||||||| || ||||||||||||||| | ||||| || ||||| |||||||| ||
Sbjct: 504 ttggagaagtacaaaaactatgactttgggagatgcccacgagtttattgctgtggacag 563
Query: 750 ccatgcctgccagttggacaatcagacatccatcgatctagtaccgtgaagatatactgc 809
|| ||| | |||||||| ||||||||||| | ||| || ||||| || || || |||||
Sbjct: 564 ccctgcttcccagttggtcaatcagacattcctcgttcgagtactgtcaaaatctactgt 623
Query: 810 cccaagtgtgaagacatctactacccacggtccaagtaccaaggcaacat 859
|| || |||||||||||||| ||||| || |||||||| |||||||||||
Sbjct: 624 ccaaaatgtgaagacatctattaccctcgatccaagtatcaaggcaacat 673
>gb|CV256227.1|CV256227 WS0243.B21_E14 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0243_E14 3', mRNA sequence
Length = 902
Score = 276 bits (139), Expect = 2e-072
Identities = 442/543 (81%)
Strand = Plus / Minus
Query: 390 gatgttagtggctctgatggagaagacacctcgtggatttcatggtattgcaacttaaga 449
||||||||||| ||||||||||| ||||| || ||||| || |||| |||||| || ||
Sbjct: 896 gatgttagtggttctgatggagatgacacatcttggatctcgtggttttgcaatttgcga 837
Query: 450 gggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttcaacctttgt 509
|| ||||| || ||||||||||| |||||||| |||||||| || || || || ||||||
Sbjct: 836 ggaaatgaatttttctgtgaagttgatgatgagtacattcaggatgattttaatctttgt 777
Query: 510 ggcctcagcagccaagttccttattatgattatgctctcgatctcattttagatattgaa 569
|| || ||||| |||||||| || ||||||||||| || ||||| || || ||| |||||
Sbjct: 776 ggactgagcagtcaagttccatactatgattatgcacttgatcttatattggatgttgaa 717
Query: 570 tcatctcatggtgatatgttcactgaggaacaaaatgagctcggagaatcagctgcagag 629
|| ||||||||||||||||||||||| ||||| |||||| | | ||||| || ||||||
Sbjct: 716 tcttctcatggtgatatgttcactgaagaacagaatgagttggtggaatctgcagcagag 657
Query: 630 atgctttatgggctgatccatgcacgatacattctgaccagtaaaggactggctgcaatg 689
|||||||| || || || |||| || ||||| || || || || || || |||| |||
Sbjct: 656 atgctttacggtcttattcatgtgcgttacatacttactagcaaggggatgtctgccatg 597
Query: 690 ctggagaagtataagaactatgactttgggcggtgcccgcgtgtttactgctgtggtcaa 749
|||||||||| || ||||||||||||||| | ||||| || ||||| |||||||| ||
Sbjct: 596 ttggagaagtacaaaaactatgactttgggagatgcccacgagtttattgctgtggacag 537
Query: 750 ccatgcctgccagttggacaatcagacatccatcgatctagtaccgtgaagatatactgc 809
|| ||| | |||||||| ||||||||||| | ||| || ||||| || || || |||||
Sbjct: 536 ccctgcttcccagttggtcaatcagacattcctcgttcaagtactgtcaaaatctactgt 477
Query: 810 cccaagtgtgaagacatctactacccacggtccaagtaccaaggcaacatcgacggcgca 869
|| || |||||||||||||| ||||| || |||||||| ||||||||||| || || ||
Sbjct: 476 ccaaaatgtgaagacatctattaccctcgatccaagtatcaaggcaacattgatggagct 417
Query: 870 tactttgggacaacgttccctcatctgttcctgatgacatacgagcacctcaagccacag 929
|| ||||| ||||| || ||||| || || |||||||||| | ||||| |||||||||
Sbjct: 416 tattttggaacaacatttcctcacctatttttgatgacatatggtcacctaaagccacag 357
Query: 930 aag 932
|||
Sbjct: 356 aag 354
>gb|CV280148.1|CV280148 WS0135.B21_A14 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0135_A14 3', mRNA sequence
Length = 985
Score = 276 bits (139), Expect = 2e-072
Identities = 445/546 (81%), Gaps = 2/546 (0%)
Strand = Plus / Minus
Query: 387 tcagatgttagtggctctgatggagaagacacctcgtggatttcatggtattgcaactta 446
|||||||||||||| ||||||||||| ||||| || ||||| || |||| |||||| ||
Sbjct: 889 tcagatgttagtggttctgatggagatgacacatcttggatctcgtggttttgcaatttg 830
Query: 447 agagggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttcaacctt 506
|||| ||||| || ||||||||||| |||||||| |||||||| || || || || |||
Sbjct: 829 cgaggaaatgaatttttctgtgaagttgatgatgagtacattcaggatgattttaatctt 770
Query: 507 tgtggcctcagcagccaagttccttattatgattatgctctcgatctcattttagatatt 566
||||| || ||||| |||||||| || ||||||||||| || ||||| || || ||| ||
Sbjct: 769 tgtggactgagcagtcaagttccatactatgattatgcacttgatcttatattggatgtt 710
Query: 567 gaatcatctcatggtgatatgttcactgaggaacaaaatgagctcggagaatcagctgca 626
||||| ||||||||||||||||||||||| ||||| |||||| | | ||||| || |||
Sbjct: 709 gaatcttctcatggtgatatgttcactgaagaacagaatgagttggtggaatctgcagca 650
Query: 627 gagatgctttatgggctgatccatgcacgatacattctgaccagtaaaggactggctgca 686
||||||||||| || || || |||| || ||||| || || || || || || ||||
Sbjct: 649 gagatgctttacggtcttattcatgtgcgttacatacttactagcaaggggatgtctgcc 590
Query: 687 atgctggagaagtataagaactatgactttgggcggtgcccgcgtgtttactgctgtggt 746
||| |||||||||| || ||||||||||||||| | ||||| || ||||| ||||||||
Sbjct: 589 atgttggagaagtacaaaaactatgactttgggagatgcccacgagtttattgctgtgga 530
Query: 747 caaccatgcctgccagttggacaatcagacatccatcgatctagtaccgtgaagatatac 806
|| || ||| | |||||||| ||||||||||| | |||||| ||||| || || || |||
Sbjct: 529 cagccctgcttcccagttggtcaatcagacattcctcgatcaagtactgtcaaaatctac 470
Query: 807 tgccccaagtgtgaagacatctactacccacggtccaagtaccaaggcaacatcgacggc 866
|| || || |||||||||||||| ||||| || |||||||| ||||||||||| || ||
Sbjct: 469 tgtccaaaatgtgaagacatctattaccctcgatccaagtatcaaggcaacattgatgga 410
Query: 867 gcatactttgggacaacgttccctcatctgttcctgatgacatacgagcacctcaagcca 926
|| || ||||| ||||| || ||||| || || ||||||||| | ||||| ||||||
Sbjct: 409 gcttattttggaacaacatttcctcacctatttttgatgacat--ggtcacctaaagcca 352
Query: 927 cagaag 932
||||||
Sbjct: 351 cagaag 346
>gb|CX656379.1|CX656379 PO01001B08 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01001B08 5', mRNA sequence
Length = 679
Score = 274 bits (138), Expect = 8e-072
Identities = 387/470 (82%)
Strand = Plus / Plus
Query: 390 gatgttagtggctctgatggagaagacacctcgtggatttcatggtattgcaacttaaga 449
||||||||||| ||||||||||| ||||| || ||||| ||||||| |||||| || ||
Sbjct: 199 gatgttagtggttctgatggagatgacacatcttggatctcatggttttgcaatttgcga 258
Query: 450 gggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttcaacctttgt 509
|| ||||| || ||||||||||| |||||||| |||||||| || || || || ||||||
Sbjct: 259 ggaaatgaatttttctgtgaagttgatgatgagtacattcaggatgattttaatctttgt 318
Query: 510 ggcctcagcagccaagttccttattatgattatgctctcgatctcattttagatattgaa 569
|| || ||||| |||||||| || |||||||||||||| ||||| || || ||| |||||
Sbjct: 319 ggactgagcagtcaagttccatactatgattatgctcttgatcttatattggatgttgaa 378
Query: 570 tcatctcatggtgatatgttcactgaggaacaaaatgagctcggagaatcagctgcagag 629
|| ||||||||||||||||||||||| ||||| |||||| | | ||||| || ||||||
Sbjct: 379 tcttctcatggtgatatgttcactgaagaacagaatgagttggtggaatctgcagcagag 438
Query: 630 atgctttatgggctgatccatgcacgatacattctgaccagtaaaggactggctgcaatg 689
|||||||| || || || |||| || ||||| || || || || || || ||||||||
Sbjct: 439 atgctttacggtcttattcatgtgcgttacatacttactagcaaggggatgtctgcaatg 498
Query: 690 ctggagaagtataagaactatgactttgggcggtgcccgcgtgtttactgctgtggtcaa 749
|||||||||| || ||||||||||||||| | ||||| || ||||| |||||||| ||
Sbjct: 499 ttggagaagtacaaaaactatgactttgggagatgcccacgagtttattgctgtggacag 558
Query: 750 ccatgcctgccagttggacaatcagacatccatcgatctagtaccgtgaagatatactgc 809
|| ||| | |||||||| ||||||||||| | ||| || |||| || || || |||||
Sbjct: 559 ccctgcttcccagttggtcaatcagacattcctcgttcgagtattgtcaaaatctactgt 618
Query: 810 cccaagtgtgaagacatctactacccacggtccaagtaccaaggcaacat 859
|| || |||||||||||||| ||||| || |||||||| |||||||||||
Sbjct: 619 ccaaaatgtgaagacatctattaccctcgatccaagtatcaaggcaacat 668
>gb|DT488868.1|DT488868 WS02537.B21_K16 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02537_K16 3', mRNA sequence
Length = 938
Score = 250 bits (126), Expect = 1e-064
Identities = 438/542 (80%)
Strand = Plus / Minus
Query: 390 gatgttagtggctctgatggagaagacacctcgtggatttcatggtattgcaacttaaga 449
||||||||||| ||||||||||| || || || ||||| ||||||| |||||| || |
Sbjct: 919 gatgttagtggttctgatggagatgatacatcttggatctcatggttttgcaatttgcgt 860
Query: 450 gggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttcaacctttgt 509
|| ||||| || ||||||||||| ||||| || |||||||| || || || || ||||||
Sbjct: 859 ggaaatgaatttttctgtgaagttgatgacgagtacattcaggatgattttaatctttgt 800
Query: 510 ggcctcagcagccaagttccttattatgattatgctctcgatctcattttagatattgaa 569
|| | ||||| |||||||| || ||||||||||| || ||||| || || ||| |||||
Sbjct: 799 ggattgagcagtcaagttccatactatgattatgcacttgatcttatattggatgttgaa 740
Query: 570 tcatctcatggtgatatgttcactgaggaacaaaatgagctcggagaatcagctgcagag 629
|| |||||||||||||||||||| || ||||| |||||| | | ||||| || ||||||
Sbjct: 739 tcttctcatggtgatatgttcaccgaagaacagaatgagttggtggaatccgcagcagag 680
Query: 630 atgctttatgggctgatccatgcacgatacattctgaccagtaaaggactggctgcaatg 689
||||| || || || || |||| || ||||| || || || || || || ||||||||
Sbjct: 679 atgctctacggtcttattcatgtgcgttacatacttactagcaaggggatgtctgcaatg 620
Query: 690 ctggagaagtataagaactatgactttgggcggtgcccgcgtgtttactgctgtggtcaa 749
|||| ||||| || ||||||||||||||| | ||||| || ||||| |||||||| ||
Sbjct: 619 ttggaaaagtacaaaaactatgactttgggagatgcccacgagtttattgctgtggacag 560
Query: 750 ccatgcctgccagttggacaatcagacatccatcgatctagtaccgtgaagatatactgc 809
|| ||||| |||||||| ||||||||||| | ||| |||||||| || || || |||||
Sbjct: 559 ccctgccttccagttggtcaatcagacattcctcgttctagtactgtcaaaatctactgt 500
Query: 810 cccaagtgtgaagacatctactacccacggtccaagtaccaaggcaacatcgacggcgca 869
|| || |||||||||||||| ||||| || |||||||| ||||||||||| || || ||
Sbjct: 499 ccaaaatgtgaagacatctattaccctcgatccaagtatcaaggcaacattgatggagct 440
Query: 870 tactttgggacaacgttccctcatctgttcctgatgacatacgagcacctcaagccacag 929
|| ||||| || || |||||||| || || |||||||||| | ||||| |||||||||
Sbjct: 439 tattttggaactacattccctcacctatttttgatgacatatggacacctaaagccacag 380
Query: 930 aa 931
||
Sbjct: 379 aa 378
>gb|DT488933.1|DT488933 WS02537.B21_N13 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02537_N13 3', mRNA sequence
Length = 933
Score = 242 bits (122), Expect = 3e-062
Identities = 437/542 (80%)
Strand = Plus / Minus
Query: 390 gatgttagtggctctgatggagaagacacctcgtggatttcatggtattgcaacttaaga 449
||||||||||| ||||||||||| || || || ||||| ||||||| |||||| || |
Sbjct: 912 gatgttagtggttctgatggagatgatacatcttggatctcatggttttgcaatttgcgt 853
Query: 450 gggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttcaacctttgt 509
|| ||||| || ||||||||||| ||||| || |||||||| || || || || ||||||
Sbjct: 852 ggaaatgaatttttctgtgaagttgatgacgagtacattcaggatgattttaatctttgt 793
Query: 510 ggcctcagcagccaagttccttattatgattatgctctcgatctcattttagatattgaa 569
|| | ||||| |||||||| || ||||||||||| || ||||| || || ||| |||||
Sbjct: 792 ggattgagcagtcaagttccatactatgattatgcacttgatcttatattggatgttgaa 733
Query: 570 tcatctcatggtgatatgttcactgaggaacaaaatgagctcggagaatcagctgcagag 629
|| |||||||||||||||||||| || ||||| |||||| | | ||||| || ||||||
Sbjct: 732 tcttctcatggtgatatgttcaccgaagaacagaatgagttggtggaatccgcagcagag 673
Query: 630 atgctttatgggctgatccatgcacgatacattctgaccagtaaaggactggctgcaatg 689
||||| || || || || |||| || ||||| || || || || || || ||||||||
Sbjct: 672 atgctctacggtcttattcatgtgcgttacatacttactagcaaggggatgtctgcaatg 613
Query: 690 ctggagaagtataagaactatgactttgggcggtgcccgcgtgtttactgctgtggtcaa 749
|||| ||||| || ||||||||||||||| | ||||| || ||||| |||||||| ||
Sbjct: 612 ttggaaaagtacaaaaactatgactttgggagatgcccacgagtttattgctgtggacag 553
Query: 750 ccatgcctgccagttggacaatcagacatccatcgatctagtaccgtgaagatatactgc 809
|| ||||| || ||||| ||||||||||| | ||| |||||||| || || || |||||
Sbjct: 552 ccctgccttccggttggtcaatcagacattcctcgttctagtactgtcaaaatctactgt 493
Query: 810 cccaagtgtgaagacatctactacccacggtccaagtaccaaggcaacatcgacggcgca 869
|| || |||||||||||||| ||||| || |||||||| ||||||||||| || || ||
Sbjct: 492 ccaaaatgtgaagacatctattaccctcgatccaagtatcaaggcaacattgatggagct 433
Query: 870 tactttgggacaacgttccctcatctgttcctgatgacatacgagcacctcaagccacag 929
|| ||||| || || |||||||| || || |||||||||| | ||||| |||||||||
Sbjct: 432 tattttggaaccacattccctcacctatttttgatgacatatggacacctaaagccacag 373
Query: 930 aa 931
||
Sbjct: 372 aa 371
>gb|CV245071.1|CV245071 WS0256.B21_G13 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0256_G13 3', mRNA sequence
Length = 855
Score = 238 bits (120), Expect = 5e-061
Identities = 390/480 (81%)
Strand = Plus / Minus
Query: 453 aatgagttcttctgtgaagtcgatgatgactacattcaagacgacttcaacctttgtggc 512
||||| || ||||||||||| |||||||| |||||||| || || || || ||||||||
Sbjct: 851 aatgaatttttctgtgaagttgatgatgagtacattcaggatgattttaatctttgtgga 792
Query: 513 ctcagcagccaagttccttattatgattatgctctcgatctcattttagatattgaatca 572
|| ||||| |||||||| || ||||||||||| || ||||| || || ||| |||||||
Sbjct: 791 ctgagcagtcaagttccatactatgattatgcacttgatcttatattggatgttgaatct 732
Query: 573 tctcatggtgatatgttcactgaggaacaaaatgagctcggagaatcagctgcagagatg 632
||||||||||||||||||||||| ||||| |||||| | | ||||| || |||||||||
Sbjct: 731 tctcatggtgatatgttcactgaagaacagaatgagttggtggaatctgcagcagagatg 672
Query: 633 ctttatgggctgatccatgcacgatacattctgaccagtaaaggactggctgcaatgctg 692
||||| || || || |||| || ||||| || || || || || || |||| ||| ||
Sbjct: 671 ctttacggtcttattcatgtgcgttacatacttactagcaaggggatgtctgccatgttg 612
Query: 693 gagaagtataagaactatgactttgggcggtgcccgcgtgtttactgctgtggtcaacca 752
|||||||| || ||||||||||||||| | ||||| || ||||| |||||||| || ||
Sbjct: 611 gagaagtacaaaaactatgactttgggagatgcccacgagtttattgctgtggacagccc 552
Query: 753 tgcctgccagttggacaatcagacatccatcgatctagtaccgtgaagatatactgcccc 812
||| | |||||||| ||||||||||| | ||| || ||||| || || || ||||| ||
Sbjct: 551 tgcttcccagttggtcaatcagacattcctcgttcaagtactgtcaaaatctactgtcca 492
Query: 813 aagtgtgaagacatctactacccacggtccaagtaccaaggcaacatcgacggcgcatac 872
|| |||||||||||||| ||||| || |||||||| ||||||||||| || || || ||
Sbjct: 491 aaatgtgaagacatctattaccctcgatccaagtatcaaggcaacattgatggagcttat 432
Query: 873 tttgggacaacgttccctcatctgttcctgatgacatacgagcacctcaagccacagaag 932
||||| ||||| || ||||| || || |||||||||| | ||||| ||||||||||||
Sbjct: 431 tttggaacaacatttcctcacctatttttgatgacatatggtcacctaaagccacagaag 372
>gb|DT515781.1|DT515781 WS02429.B21.1_I03 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02429_I03 3', mRNA sequence
Length = 902
Score = 232 bits (117), Expect = 3e-059
Identities = 411/509 (80%)
Strand = Plus / Minus
Query: 423 tggatttcatggtattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgac 482
||||| ||||||| |||||| || | || ||||| || ||||||||||| ||||| ||
Sbjct: 886 tggatctcatggttttgcaatttgcgtggaaatgaatttttctgtgaagttgatgacgag 827
Query: 483 tacattcaagacgacttcaacctttgtggcctcagcagccaagttccttattatgattat 542
|||||||| || || || || |||||||| | ||||| |||||||| || |||||||||
Sbjct: 826 tacattcaggatgattttaatctttgtggattgagcagtcaagttccatactatgattat 767
Query: 543 gctctcgatctcattttagatattgaatcatctcatggtgatatgttcactgaggaacaa 602
|| || ||||| || || ||| ||||||| |||||||||||||||||||| || |||||
Sbjct: 766 gcacttgatcttatattggatgttgaatcttctcatggtgatatgttcaccgaagaacag 707
Query: 603 aatgagctcggagaatcagctgcagagatgctttatgggctgatccatgcacgatacatt 662
|||||| | | ||||| || ||||||||||| || || || || |||| || |||||
Sbjct: 706 aatgagttggtggaatccgcagcagagatgctctacggtcttattcatgtgcgttacata 647
Query: 663 ctgaccagtaaaggactggctgcaatgctggagaagtataagaactatgactttgggcgg 722
|| || || || || || |||||||| |||||||||| || ||||||||||||||| |
Sbjct: 646 cttactagcaaggggatgtctgcaatgttggagaagtacaaaaactatgactttgggaga 587
Query: 723 tgcccgcgtgtttactgctgtggtcaaccatgcctgccagttggacaatcagacatccat 782
||||| || ||||| |||||||| || || ||||| |||||||| ||||||||||| | |
Sbjct: 586 tgcccacgagtttattgctgtggacagccctgccttccagttggtcaatcagacattcct 527
Query: 783 cgatctagtaccgtgaagatatactgccccaagtgtgaagacatctactacccacggtcc 842
|| |||||||| || || || ||||| || || |||||||||||||| ||||| || |||
Sbjct: 526 cgttctagtactgtcaaaatctactgtccaaaatgtgaagacatctattaccctcgatcc 467
Query: 843 aagtaccaaggcaacatcgacggcgcatactttgggacaacgttccctcatctgttcctg 902
||||| ||||||||||| || || || || ||||| || || |||||||| || || ||
Sbjct: 466 aagtatcaaggcaacattgatggagcttattttggaaccacattccctcacctatttttg 407
Query: 903 atgacatacgagcacctcaagccacagaa 931
|||||||| | ||||| |||||||||||
Sbjct: 406 atgacatatggacacctaaagccacagaa 378
>gb|CV283287.1|CV283287 WS0186.B21_O21 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0186_O21 3', mRNA sequence
Length = 868
Score = 226 bits (114), Expect = 2e-057
Identities = 372/458 (81%)
Strand = Plus / Minus
Query: 475 atgatgactacattcaagacgacttcaacctttgtggcctcagcagccaagttccttatt 534
||||||| |||||||| || || || || |||||||| || ||||| |||||||| || |
Sbjct: 868 atgatgagtacattcaggatgattttaatctttgtggactgagcagtcaagttccatact 809
Query: 535 atgattatgctctcgatctcattttagatattgaatcatctcatggtgatatgttcactg 594
|||||||||| || ||||| || || ||| ||||||| ||||||||||||||||||||||
Sbjct: 808 atgattatgcacttgatcttatattggatgttgaatcttctcatggtgatatgttcactg 749
Query: 595 aggaacaaaatgagctcggagaatcagctgcagagatgctttatgggctgatccatgcac 654
| ||||| |||||| | | ||||| || |||||||||||||| || || || |||| |
Sbjct: 748 aagaacagaatgagttggtggaatctgcagcagagatgctttacggtcttattcatgtgc 689
Query: 655 gatacattctgaccagtaaaggactggctgcaatgctggagaagtataagaactatgact 714
| ||||| || || || || || || |||| ||| |||||||||| || ||||||||||
Sbjct: 688 gttacatacttactagcaaggggatgtctgccatgttggagaagtacaaaaactatgact 629
Query: 715 ttgggcggtgcccgcgtgtttactgctgtggtcaaccatgcctgccagttggacaatcag 774
||||| | ||||| || ||||| |||||||| || || ||| | |||||||| |||||||
Sbjct: 628 ttgggagatgcccacgagtttattgctgtggacagccctgcttcccagttggtcaatcag 569
Query: 775 acatccatcgatctagtaccgtgaagatatactgccccaagtgtgaagacatctactacc 834
|||| | |||||| ||||| || || || ||||| || || |||||||||||||| ||||
Sbjct: 568 acattcctcgatcaagtactgtcaaaatctactgtccaaaatgtgaagacatctattacc 509
Query: 835 cacggtccaagtaccaaggcaacatcgacggcgcatactttgggacaacgttccctcatc 894
| || |||||||| ||||||||||| || || || || ||||| ||||| || ||||| |
Sbjct: 508 ctcgatccaagtatcaaggcaacattgatggagcttattttggaacaacatttcctcacc 449
Query: 895 tgttcctgatgacatacgagcacctcaagccacagaag 932
| || |||||||||| | ||||| ||||||||||||
Sbjct: 448 tatttttgatgacatatggtcacctaaagccacagaag 411
>gb|BU831078.1|BU831078 T016H09 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 505
Score = 192 bits (97), Expect = 2e-047
Identities = 322/397 (81%)
Strand = Plus / Plus
Query: 536 tgattatgctctcgatctcattttagatattgaatcatctcatggtgatatgttcactga 595
||||||||| || ||||| || || ||| ||||||| |||||||||||||||||||||||
Sbjct: 2 tgattatgcacttgatcttatattggatgttgaatcttctcatggtgatatgttcactga 61
Query: 596 ggaacaaaatgagctcggagaatcagctgcagagatgctttatgggctgatccatgcacg 655
||||| |||||| | | ||||| || |||||||||||||| || || || |||| ||
Sbjct: 62 agaacagaatgagttggtggaatctgcagcagagatgctttacggtcttattcatgtgcg 121
Query: 656 atacattctgaccagtaaaggactggctgcaatgctggagaagtataagaactatgactt 715
||||| || || || || || || |||||||| |||||||||| || |||||||||||
Sbjct: 122 ttacatacttactagcaaggggatgtctgcaatgttggagaagtacaaaaactatgactt 181
Query: 716 tgggcggtgcccgcgtgtttactgctgtggtcaaccatgcctgccagttggacaatcaga 775
|||| | ||||| || ||||| |||||||| || || ||| | |||||||| ||||||||
Sbjct: 182 tgggagatgcccacgagtttattgctgtggacagccctgcttcccagttggtcaatcaga 241
Query: 776 catccatcgatctagtaccgtgaagatatactgccccaagtgtgaagacatctactaccc 835
||| | ||| || ||||| || || || ||||| || || |||||||||||||| |||||
Sbjct: 242 cattcctcgttcgagtactgtcaaaatctactgtccaaaatgtgaagacatctattaccc 301
Query: 836 acggtccaagtaccaaggcaacatcgacggcgcatactttgggacaacgttccctcatct 895
|| |||||||| ||||||||||| || || || || ||||| ||||| || ||||| ||
Sbjct: 302 tcgatccaagtatcaaggcaacattgatggagcttattttggaacaacatttcctcacct 361
Query: 896 gttcctgatgacatacgagcacctcaagccacagaag 932
|| |||||||||| | ||||| ||||||||||||
Sbjct: 362 atttttgatgacatatggtcacctaaagccacagaag 398
>gb|AJ777153.1|AJ777153 AJ777153 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400023H02F1, mRNA sequence
Length = 636
Score = 190 bits (96), Expect = 1e-046
Identities = 276/336 (82%)
Strand = Plus / Plus
Query: 593 tgaggaacaaaatgagctcggagaatcagctgcagagatgctttatgggctgatccatgc 652
|||||||||||||||| | | ||||| || ||||||||||||||||| ||||| |||||
Sbjct: 230 tgaggaacaaaatgagttggttgaatctgcagcagagatgctttatggactgattcatgc 289
Query: 653 acgatacattctgaccagtaaaggactggctgcaatgctggagaagtataagaactatga 712
|||||||| ||||||| || || |||| || |||||||| ||||| |||||||||||
Sbjct: 290 tcgatacatattgaccagcaaggggatggcagctatgctggacaagtacaagaactatga 349
Query: 713 ctttgggcggtgcccgcgtgtttactgctgtggtcaaccatgcctgccagttggacaatc 772
||||||| | ||||| | ||| |||||||||| ||||| ||||| || ||||| |||||
Sbjct: 350 ctttgggagatgcccaagagttcactgctgtggacaaccttgccttcctgttggtcaatc 409
Query: 773 agacatccatcgatctagtaccgtgaagatatactgccccaagtgtgaagacatctacta 832
|||||| | ||| || || | | || |||| |||||||| |||||| || || |||||
Sbjct: 410 agacattcctcggtcaagcaatattaaaatatgctgccccaggtgtgacgatatatacta 469
Query: 833 cccacggtccaagtaccaaggcaacatcgacggcgcatactttgggacaacgttccctca 892
|||||| |||||||| |||||||||||||| || ||||| |||||||| || || |||||
Sbjct: 470 cccacgttccaagtatcaaggcaacatcgatggagcatattttgggacgacatttcctca 529
Query: 893 tctgttcctgatgacatacgagcacctcaagccaca 928
|||||| | ||||| || | ||| |||||||||||
Sbjct: 530 cctgttcttaatgacttatgggcatctcaagccaca 565
Score = 77.8 bits (39), Expect = 1e-012
Identities = 87/103 (84%)
Strand = Plus / Plus
Query: 445 taagagggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttcaacc 504
||||||| ||||| ||||| |||||||| |||||||| ||| | ||||| ||||| ||||
Sbjct: 97 taagaggaaatgaattcttttgtgaagtggatgatgattacgtacaagatgactttaacc 156
Query: 505 tttgtggcctcagcagccaagttccttattatgattatgctct 547
| ||||| | |||| ||||||||||||||||| ||||||||
Sbjct: 157 tctgtgggttaagcactcaagttccttattatgactatgctct 199
>gb|DT503000.1|DT503000 WS0135.BR_A14 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0135_A14 5', mRNA sequence
Length = 954
Score = 180 bits (91), Expect = 9e-044
Identities = 211/251 (84%)
Strand = Plus / Plus
Query: 387 tcagatgttagtggctctgatggagaagacacctcgtggatttcatggtattgcaactta 446
|||||||||||||| ||||||||||| ||||| || ||||| || |||| |||||| ||
Sbjct: 582 tcagatgttagtggttctgatggagatgacacatcttggatctcgtggttttgcaatttg 641
Query: 447 agagggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttcaacctt 506
|||| ||||| || ||||||||||| |||||||| |||||||| || || || || |||
Sbjct: 642 cgaggaaatgaatttttctgtgaagttgatgatgagtacattcaggatgattttaatctt 701
Query: 507 tgtggcctcagcagccaagttccttattatgattatgctctcgatctcattttagatatt 566
||||| || ||||| |||||||| || ||||||||||| || ||||| || || ||| ||
Sbjct: 702 tgtggactgagcagtcaagttccatactatgattatgcacttgatcttatattggatgtt 761
Query: 567 gaatcatctcatggtgatatgttcactgaggaacaaaatgagctcggagaatcagctgca 626
||||| ||||||||||||||||||||||| ||||| |||||| | | ||||| || |||
Sbjct: 762 gaatcttctcatggtgatatgttcactgaagaacagaatgagttggtggaatctgcagca 821
Query: 627 gagatgcttta 637
|||||||||||
Sbjct: 822 gagatgcttta 832
Score = 54.0 bits (27), Expect = 1e-005
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 691 tggagaagtataagaactatgactttgggcggtgcccgcgtgtttactgctgtgg 745
|||||||||| || ||||||||||||||| | ||||| || ||||| ||||||||
Sbjct: 886 tggagaagtacaaaaactatgactttgggagatgcccacgagtttattgctgtgg 940
>gb|BU886401.1|BU886401 R045A05 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 554
Score = 176 bits (89), Expect = 1e-042
Identities = 224/269 (83%)
Strand = Plus / Plus
Query: 390 gatgttagtggctctgatggagaagacacctcgtggatttcatggtattgcaacttaaga 449
||||||||||| || |||||||| || || |||||||| |||||| |||||| |||||
Sbjct: 275 gatgttagtggttccgatggagatgagacgtcgtggatcacatggttttgcaatctaaga 334
Query: 450 gggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttcaacctttgt 509
|||||||| ||||| |||||||| |||||||| ||||| ||||| || || ||||| |||
Sbjct: 335 gggaatgaattcttttgtgaagttgatgatgattacatacaagatgattttaacctctgt 394
Query: 510 ggcctcagcagccaagttccttattatgattatgctctcgatctcattttagatattgaa 569
|| | ||||| |||||||| || || |||||||| || ||| | ||||| |||||||||
Sbjct: 395 gggttaagcagtcaagttccatactacgattatgcccttgatttgattttggatattgaa 454
Query: 570 tcatctcatggtgatatgttcactgaggaacaaaatgagctcggagaatcagctgcagag 629
|| |||||||||||||||||||| |||||||| ||||| | | ||||| || ||||||
Sbjct: 455 tcctctcatggtgatatgttcacagaggaacagaatgaattggttgaatctgcagcagag 514
Query: 630 atgctttatgggctgatccatgcacgata 658
||||||||||| |||| ||||| |||||
Sbjct: 515 atgctttatggattgattcatgctcgata 543
>gb|CV282917.1|CV282917 WS0185.B21_P04 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0185_P04 3', mRNA sequence
Length = 721
Score = 174 bits (88), Expect = 6e-042
Identities = 274/336 (81%)
Strand = Plus / Minus
Query: 593 tgaggaacaaaatgagctcggagaatcagctgcagagatgctttatgggctgatccatgc 652
|||||||||||||||| | | ||||| || ||||||||||||||||| ||||| |||||
Sbjct: 652 tgaggaacaaaatgagttggttgaatctgcagcagagatgctttatggactgattcatgc 593
Query: 653 acgatacattctgaccagtaaaggactggctgcaatgctggagaagtataagaactatga 712
|||||||| ||||||| || || |||| || |||||||| ||||| |||||||||||
Sbjct: 592 tcgatacatattgaccagcaaggggatggcagctatgctggacaagtacaagaactatga 533
Query: 713 ctttgggcggtgcccgcgtgtttactgctgtggtcaaccatgcctgccagttggacaatc 772
||||||| | ||||| | ||| |||||||||| ||||| ||||| || ||||| |||||
Sbjct: 532 ctttgggagatgcccaagagttcactgctgtggacaaccttgccttcctgttggtcaatc 473
Query: 773 agacatccatcgatctagtaccgtgaagatatactgccccaagtgtgaagacatctacta 832
|||||| | ||| || || | || |||| |||||||| |||||| || || |||||
Sbjct: 472 agacattcctcggtcaagcaatactaaaatatgctgccccaggtgtgacgatatatacta 413
Query: 833 cccacggtccaagtaccaaggcaacatcgacggcgcatactttgggacaacgttccctca 892
|||||| |||||||| ||||||||||| || || ||||| |||||||| || || |||||
Sbjct: 412 cccacgttccaagtatcaaggcaacattgatggagcatattttgggacgacatttcctca 353
Query: 893 tctgttcctgatgacatacgagcacctcaagccaca 928
|||||| | ||||| || | ||| |||||||||||
Sbjct: 352 cctgttcttaatgacttatgggcatctcaagccaca 317
Score = 44.1 bits (22), Expect = 0.014
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 522 caagttccttattatgattatgctct 547
||||||||||||||||| ||||||||
Sbjct: 708 caagttccttattatgactatgctct 683
>gb|DN500080.1|DN500080 UB14CPE07.5pR Populus active cambium cDNA library Populus tremula
cDNA clone UB14CPE07 5', mRNA sequence
Length = 772
Score = 174 bits (88), Expect = 6e-042
Identities = 274/336 (81%)
Strand = Plus / Plus
Query: 593 tgaggaacaaaatgagctcggagaatcagctgcagagatgctttatgggctgatccatgc 652
|||||||||||||||| | | ||||| || ||||||||||||||||| ||||| |||||
Sbjct: 145 tgaggaacaaaatgagttggttgaatctgcagcagagatgctttatggactgattcatgc 204
Query: 653 acgatacattctgaccagtaaaggactggctgcaatgctggagaagtataagaactatga 712
|||||||| ||||||| || || |||| || |||||||| ||||| |||||||||||
Sbjct: 205 tcgatacatattgaccagcaaggggatggcagctatgctggacaagtacaagaactatga 264
Query: 713 ctttgggcggtgcccgcgtgtttactgctgtggtcaaccatgcctgccagttggacaatc 772
||||||| | ||||| | ||| |||||||||| ||||| ||||| || ||||| |||||
Sbjct: 265 ctttgggagatgcccaagagttcactgctgtggacaaccttgccttcctgttggtcaatc 324
Query: 773 agacatccatcgatctagtaccgtgaagatatactgccccaagtgtgaagacatctacta 832
|||||| | ||| || || | | || |||| ||||||| |||||| || || |||||
Sbjct: 325 agacattcctcggtcaagcaatattaaaatatgttgccccaggtgtgacgatatatacta 384
Query: 833 cccacggtccaagtaccaaggcaacatcgacggcgcatactttgggacaacgttccctca 892
|||||| |||||||| ||||||||||| || || ||||| |||||||| ||||| |||||
Sbjct: 385 cccacgttccaagtatcaaggcaacattgatggagcatattttgggacgacgtttcctca 444
Query: 893 tctgttcctgatgacatacgagcacctcaagccaca 928
|||||| | ||||| || | ||| || ||||||||
Sbjct: 445 cctgttcttaatgacttatgggcatctgaagccaca 480
Score = 69.9 bits (35), Expect = 2e-010
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 453 aatgagttcttctgtgaagtcgatgatgactacattcaagacgacttcaacctttgtggc 512
||||| ||||| |||||||| |||||||| ||||| ||||| ||||| ||||| || ||
Sbjct: 20 aatgaattcttttgtgaagtggatgatgattacatacaagatgactttaacctctgcggg 79
Query: 513 ctcagcagccaagttccttattatgattatgctct 547
| |||| ||||||||||||||||| ||||||||
Sbjct: 80 ttaagcactcaagttccttattatgactatgctct 114
>gb|CK090790.1|CK090790 F025P07.3pR Populus flower cDNA library Populus trichocarpa cDNA
clone F025P07 3', mRNA sequence
Length = 746
Score = 168 bits (85), Expect = 4e-040
Identities = 289/357 (80%)
Strand = Plus / Minus
Query: 575 tcatggtgatatgttcactgaggaacaaaatgagctcggagaatcagctgcagagatgct 634
|||||||||||||||||| || ||||| |||||| | | ||||| || |||||||||||
Sbjct: 730 tcatggtgatatgttcaccgaagaacagaatgagttggtggaatccgcagcagagatgct 671
Query: 635 ttatgggctgatccatgcacgatacattctgaccagtaaaggactggctgcaatgctgga 694
|| || || || |||| || ||||| || || || || || || |||||||| ||||
Sbjct: 670 ctacggtcttattcatgtgcgttacatacttactagcaaggggatgtctgcaatgttgga 611
Query: 695 gaagtataagaactatgactttgggcggtgcccgcgtgtttactgctgtggtcaaccatg 754
|||||| || ||||||||||||||| | ||||| || ||||| |||||||| || || ||
Sbjct: 610 gaagtacaaaaactatgactttgggagatgcccacgagtttattgctgtggacagccctg 551
Query: 755 cctgccagttggacaatcagacatccatcgatctagtaccgtgaagatatactgccccaa 814
||| |||||||| ||||||||||| | ||| |||||||| || || || ||||| || ||
Sbjct: 550 ccttccagttggtcaatcagacattcctcgttctagtactgtcaaaatctactgtccaaa 491
Query: 815 gtgtgaagacatctactacccacggtccaagtaccaaggcaacatcgacggcgcatactt 874
|||||||||||||| ||||| || |||||||| ||||||||||| || || || || ||
Sbjct: 490 atgtgaagacatctattaccctcgatccaagtatcaaggcaacattgatggagcttattt 431
Query: 875 tgggacaacgttccctcatctgttcctgatgacatacgagcacctcaagccacagaa 931
||| || || |||||||| || || |||||||||| | ||||| |||||||||||
Sbjct: 430 tggaaccacattccctcacctatttttgatgacatatggacacctaaagccacagaa 374
>gb|CX172891.1|CX172891 D07_69-73_07.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 705
Score = 161 bits (81), Expect = 9e-038
Identities = 183/217 (84%)
Strand = Plus / Plus
Query: 445 taagagggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttcaacc 504
||||||| ||||| ||||| |||||||| |||||||| ||||| ||||| ||||| ||||
Sbjct: 489 taagaggaaatgaattcttttgtgaagtggatgatgattacatacaagatgactttaacc 548
Query: 505 tttgtggcctcagcagccaagttccttattatgattatgctctcgatctcattttagata 564
| ||||| | |||| ||||||||||||||||| |||||||| ||| | ||||| |||
Sbjct: 549 tctgtgggttaagcactcaagttccttattatgactatgctcttgatttgattttggatg 608
Query: 565 ttgaatcatctcatggtgatatgttcactgaggaacaaaatgagctcggagaatcagctg 624
| || || || ||||||||||||||||| ||||||||||||||| | | ||||| || |
Sbjct: 609 tcgagtcttcccatggtgatatgttcacagaggaacaaaatgagttggttgaatctgcag 668
Query: 625 cagagatgctttatgggctgatccatgcacgatacat 661
|||||||||||||||| ||||| ||||| ||||||||
Sbjct: 669 cagagatgctttatggactgattcatgctcgatacat 705
>gb|DT511080.1|DT511080 WS02429.BR_I03 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02429_I03 5', mRNA sequence
Length = 888
Score = 155 bits (78), Expect = 5e-036
Identities = 267/330 (80%)
Strand = Plus / Plus
Query: 390 gatgttagtggctctgatggagaagacacctcgtggatttcatggtattgcaacttaaga 449
||||||||||| ||||||||||| || || || ||||| ||||||| |||||| || |
Sbjct: 559 gatgttagtggttctgatggagatgatacatcttggatctcatggttttgcaatttgcgt 618
Query: 450 gggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttcaacctttgt 509
|| ||||| || ||||||||||| ||||| || |||||||| || || || || ||||||
Sbjct: 619 ggaaatgaatttttctgtgaagttgatgacgagtacattcaggatgattttaatctttgt 678
Query: 510 ggcctcagcagccaagttccttattatgattatgctctcgatctcattttagatattgaa 569
|| | ||||| |||||||| || ||||||||||| || ||||| || || ||| |||||
Sbjct: 679 ggattgagcagtcaagttccatactatgattatgcacttgatcttatattggatgttgaa 738
Query: 570 tcatctcatggtgatatgttcactgaggaacaaaatgagctcggagaatcagctgcagag 629
|| |||||||||||||||||||| || ||||| |||||| | | ||||| || ||||||
Sbjct: 739 tcttctcatggtgatatgttcaccgaagaacagaatgagttggtggaatccgcagcagag 798
Query: 630 atgctttatgggctgatccatgcacgatacattctgaccagtaaaggactggctgcaatg 689
||||| || || || || |||| || ||||| || || || || || || ||||||||
Sbjct: 799 atgctctacggtcttattcatgtgcgttacatacttactagcaaggggatgtctgcaatg 858
Query: 690 ctggagaagtataagaactatgactttggg 719
|||||||||| || |||||||||||||||
Sbjct: 859 ttggagaagtacaaaaactatgactttggg 888
>gb|BI120916.1|BI120916 F025P07Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 320
Score = 151 bits (76), Expect = 8e-035
Identities = 242/296 (81%), Gaps = 1/296 (0%)
Strand = Plus / Plus
Query: 565 ttgaatcatctcatggtgatatgttcactgaggaacaaaatgagctcggagaatcagctg 624
||||||| |||||||||||||||||||| || ||||| |||||| | | ||||| || |
Sbjct: 7 ttgaatcttctcatggtgatatgttcaccgaagaacagaatgagttggtggaatccgcag 66
Query: 625 cagagatgctttatgggctgatccatgcacgatacattctgaccagtaaaggactggctg 684
|||||||||| || || || || |||| || ||||| || || || || || || |||
Sbjct: 67 cagagatgctctacggtcttattcatgtgcgttacatacttactagcaaggggatgtctg 126
Query: 685 caatgctggagaagtataagaactatgactttgggcggtgcccgc-gtgtttactgctgt 743
||||| |||||||||| || ||||||||||||||| | ||||| | | ||||| ||||||
Sbjct: 127 caatgttggagaagtacaaaaactatgactttgggagatgcccaccgagtttattgctgt 186
Query: 744 ggtcaaccatgcctgccagttggacaatcagacatccatcgatctagtaccgtgaagata 803
|| || || ||||| |||||||| ||||||||||| | ||| |||||||| || || ||
Sbjct: 187 ggacagccctgccttccagttggtcaatcagacattcctcgttctagtactgtcaaaatc 246
Query: 804 tactgccccaagtgtgaagacatctactacccacggtccaagtaccaaggcaacat 859
||||| || || |||||||||||||| ||||| || |||||||| |||||||||||
Sbjct: 247 tactgtccaaaatgtgaagacatctattaccctcgatccaagtatcaaggcaacat 302
>gb|BI121646.1|BI121646 F043P37Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 288
Score = 147 bits (74), Expect = 1e-033
Identities = 230/282 (81%)
Strand = Plus / Plus
Query: 565 ttgaatcatctcatggtgatatgttcactgaggaacaaaatgagctcggagaatcagctg 624
||||||| |||||||||||||||||||| || ||||| |||||| | | ||||| || |
Sbjct: 7 ttgaatcttctcatggtgatatgttcaccgaagaacagaatgagttggtggaatccgcag 66
Query: 625 cagagatgctttatgggctgatccatgcacgatacattctgaccagtaaaggactggctg 684
|||||||||| || || || || |||| || ||||| || || || || || || |||
Sbjct: 67 cagagatgctctacggtcttattcatgtgcgttacatacttactagcaaggggatgtctg 126
Query: 685 caatgctggagaagtataagaactatgactttgggcggtgcccgcgtgtttactgctgtg 744
||||| |||||||||| || ||||||||||||||| | ||||| || ||||| |||||||
Sbjct: 127 caatgttggagaagtacaaaaactatgactttgggagatgcccacgagtttattgctgtg 186
Query: 745 gtcaaccatgcctgccagttggacaatcagacatccatcgatctagtaccgtgaagatat 804
| || || ||||| |||||||| ||||||||||| | ||| |||||||| || || || |
Sbjct: 187 gacagccctgccttccagttggtcaatcagacattcctcgttctagtactgtcaaaatct 246
Query: 805 actgccccaagtgtgaagacatctactacccacggtccaagt 846
|||| || || |||||||||||||| ||||| || |||||||
Sbjct: 247 actgtccaaaatgtgaagacatctattaccctcgatccaagt 288
>gb|CX659721.1|CX659721 PO01013B11 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01013B11 5', mRNA sequence
Length = 348
Score = 141 bits (71), Expect = 8e-032
Identities = 260/323 (80%)
Strand = Plus / Plus
Query: 423 tggatttcatggtattgcaacttaagagggaatgagttcttctgtgaagtcgatgatgac 482
||||| ||||||| |||||| || | || ||||| || ||||||||||| ||||| ||
Sbjct: 14 tggatctcatggttttgcaatttgcgtggaaatgaatttttctgtgaagttgatgacgag 73
Query: 483 tacattcaagacgacttcaacctttgtggcctcagcagccaagttccttattatgattat 542
|||||||| || || || || |||||||| | ||||| |||||||| || |||||||||
Sbjct: 74 tacattcaggatgattttaatctttgtggattgagcagtcaagttccatactatgattat 133
Query: 543 gctctcgatctcattttagatattgaatcatctcatggtgatatgttcactgaggaacaa 602
|| || ||||| || || ||| ||||||| ||||| ||||||||||||||||| |||||
Sbjct: 134 gcacttgatcttatattggatgttgaatcttctcacggtgatatgttcactgaagaacag 193
Query: 603 aatgagctcggagaatcagctgcagagatgctttatgggctgatccatgcacgatacatt 662
|||||| | | ||||| || ||||||||||| || || || || |||| || |||||
Sbjct: 194 aatgagttggtggaatccgcagcagagatgctctacggtcttattcatgtgcgttacata 253
Query: 663 ctgaccagtaaaggactggctgcaatgctggagaagtataagaactatgactttgggcgg 722
|| || || || || || |||||||| |||||||||| || ||||||||||||||| |
Sbjct: 254 cttactagcaaggggatgtctgcaatgttggagaagtacaaaaactatgactttgggaga 313
Query: 723 tgcccgcgtgtttactgctgtgg 745
||||| || ||||| ||||||||
Sbjct: 314 tgcccacgagtttattgctgtgg 336
>gb|BU833637.1|BU833637 T050F09 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 718
Score = 137 bits (69), Expect = 1e-030
Identities = 201/245 (82%)
Strand = Plus / Plus
Query: 390 gatgttagtggctctgatggagaagacacctcgtggatttcatggtattgcaacttaaga 449
||||||||||| ||||||||||| || || || ||||| ||||||| |||||| || |
Sbjct: 446 gatgttagtggttctgatggagatgatacatcttggatctcatggttttgcaatttgcgt 505
Query: 450 gggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttcaacctttgt 509
|| ||||| || ||||||||||| ||||| || |||||||| || || || || ||||||
Sbjct: 506 ggaaatgaatttttctgtgaagttgatgacgagtacattcaggatgattttaatctttgt 565
Query: 510 ggcctcagcagccaagttccttattatgattatgctctcgatctcattttagatattgaa 569
|| | ||||| |||||||| || ||||||||||| || ||||| || || ||| |||||
Sbjct: 566 ggattgagcagtcaagttccatactatgattatgcacttgatcttatattggatgttgaa 625
Query: 570 tcatctcatggtgatatgttcactgaggaacaaaatgagctcggagaatcagctgcagag 629
|| ||||| ||||||||||||||||| ||||| |||||| | | ||||| || ||||||
Sbjct: 626 tcttctcacggtgatatgttcactgaagaacagaatgagttggtggaatccgcagcagag 685
Query: 630 atgct 634
|||||
Sbjct: 686 atgct 690
>gb|CV231383.1|CV231383 WS0194.B21_G03 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0194_G03 3', mRNA sequence
Length = 591
Score = 133 bits (67), Expect = 2e-029
Identities = 205/251 (81%)
Strand = Plus / Minus
Query: 682 ctgcaatgctggagaagtataagaactatgactttgggcggtgcccgcgtgtttactgct 741
|||| ||| |||||||||| || ||||||||||||||| | ||||| || ||||| ||||
Sbjct: 571 ctgccatgttggagaagtacaaaaactatgactttgggagatgcccacgagtttattgct 512
Query: 742 gtggtcaaccatgcctgccagttggacaatcagacatccatcgatctagtaccgtgaaga 801
|||| || || ||| | |||||||| ||||||||||| | ||| || ||||| || || |
Sbjct: 511 gtggacagccctgcttcccagttggtcaatcagacattcctcgttcaagtactgtcaaaa 452
Query: 802 tatactgccccaagtgtgaagacatctactacccacggtccaagtaccaaggcaacatcg 861
| ||||| || || |||||||||||||| ||||| || |||||||| ||||||||||| |
Sbjct: 451 tctactgtccaaaatgtgaagacatctattaccctcgatccaagtatcaaggcaacattg 392
Query: 862 acggcgcatactttgggacaacgttccctcatctgttcctgatgacatacgagcacctca 921
| || || || ||||| ||||| || ||||| || || |||||||||| | ||||| |
Sbjct: 391 atggagcttattttggaacaacatttcctcacctatttttgatgacatatggtcacctaa 332
Query: 922 agccacagaag 932
|||||||||||
Sbjct: 331 agccacagaag 321
>gb|BU870987.1|BU870987 Q025F05 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 558
Score = 131 bits (66), Expect = 8e-029
Identities = 159/190 (83%)
Strand = Plus / Plus
Query: 390 gatgttagtggctctgatggagaagacacctcgtggatttcatggtattgcaacttaaga 449
||||||||||| || |||||||| || || |||||||| ||||||| |||||| |||||
Sbjct: 235 gatgttagtggttccgatggagatgagacgtcgtggatctcatggttttgcaatctaaga 294
Query: 450 gggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttcaacctttgt 509
|||||||| ||||| |||||||| |||||||| ||||| ||||| || || ||||| |||
Sbjct: 295 gggaatgaattcttttgtgaagttgatgatgattacatacaagatgattttaacctctgt 354
Query: 510 ggcctcagcagccaagttccttattatgattatgctctcgatctcattttagatattgaa 569
|| | ||||| |||||||| || || |||||||| || ||| | ||||| |||||||||
Sbjct: 355 gggttaagcagtcaagttccatactacgattatgcccttgatttgattttggatattgaa 414
Query: 570 tcatctcatg 579
|| |||||||
Sbjct: 415 tcctctcatg 424
Score = 48.1 bits (24), Expect = 0.001
Identities = 85/104 (81%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 615 gaatcagctgcagagatgctttatgggctgatccatgcacgatacattctgaccagtaaa 674
||||| || ||||||||||||||||| |||| ||||| ||||| || || ||| |||
Sbjct: 445 gaatctgcagcagagatgctttatggattgattcatgctcgatatatattgcgcagcaaa 504
Query: 675 ggactggctgcaatgctggagaagtataagaactatgactttgg 718
|| |||| || |||||||||||| | || ||||||||||||||
Sbjct: 505 gggatggcagctatgctggagaag-acaaaaactatgactttgg 547
>gb|AJ772236.1|AJ772236 AJ772236 Populus euphratica shoot in vitro plantlet Israel Populus
euphratica cDNA clone P0001700003C11F1, mRNA sequence
Length = 235
Score = 131 bits (66), Expect = 8e-029
Identities = 150/178 (84%)
Strand = Plus / Minus
Query: 522 caagttccttattatgattatgctctcgatctcattttagatattgaatcatctcatggt 581
||||||||||||||||| |||||||| ||| | ||||| ||| | || || |||||||||
Sbjct: 226 caagttccttattatgactatgctcttgatttgattttggatgtcgagtcttctcatggt 167
Query: 582 gatatgttcactgaggaacaaaatgagctcggagaatcagctgcagagatgctttatggg 641
||||||||||| ||||||||||||||| | | ||||| || |||||||||||||||||
Sbjct: 166 gatatgttcacagaggaacaaaatgagttggttgaatctgcagcagagatgctttatgga 107
Query: 642 ctgatccatgcacgatacattctgaccagtaaaggactggctgcaatgctggagaagt 699
||||| ||||| |||||||| ||||||| || || |||| || |||||||| ||||
Sbjct: 106 ctgattcatgctcgatacatattgaccagcaaggggatggccgctatgctggacaagt 49
>gb|CV232622.1|CV232622 WS0198.B21_C22 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0198_C22 3', mRNA sequence
Length = 588
Score = 131 bits (66), Expect = 8e-029
Identities = 198/242 (81%)
Strand = Plus / Minus
Query: 691 tggagaagtataagaactatgactttgggcggtgcccgcgtgtttactgctgtggtcaac 750
|||||||||| || ||||||||||||||| | ||||| || ||||| |||||||| || |
Sbjct: 587 tggagaagtacaaaaactatgactttgggagatgcccacgagtttattgctgtggacagc 528
Query: 751 catgcctgccagttggacaatcagacatccatcgatctagtaccgtgaagatatactgcc 810
| ||| | |||||||| ||||||||||| | ||| || ||||| || || || ||||| |
Sbjct: 527 cctgcttcccagttggtcaatcagacattcctcgttcaagtactgtcaaaatctactgtc 468
Query: 811 ccaagtgtgaagacatctactacccacggtccaagtaccaaggcaacatcgacggcgcat 870
| || |||||||||||||| ||||| || |||||||| ||||||||||| || || || |
Sbjct: 467 caaaatgtgaagacatctattaccctcgatccaagtatcaaggcaacattgatggagctt 408
Query: 871 actttgggacaacgttccctcatctgttcctgatgacatacgagcacctcaagccacaga 930
| ||||| ||||| || ||||| || || |||||||||| | ||||| ||||||||||
Sbjct: 407 attttggaacaacatttcctcacctatttttgatgacatatggtcacctaaagccacaga 348
Query: 931 ag 932
||
Sbjct: 347 ag 346
>gb|DT473198.1|DT473198 WS01228.BR_O04 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01228_O04 5', mRNA sequence
Length = 855
Score = 131 bits (66), Expect = 8e-029
Identities = 156/186 (83%)
Strand = Plus / Plus
Query: 593 tgaggaacaaaatgagctcggagaatcagctgcagagatgctttatgggctgatccatgc 652
|||||||||||||||| | | ||||| || ||||||||||||||||| ||||| |||||
Sbjct: 608 tgaggaacaaaatgagttggttgaatctgcagcagagatgctttatggactgattcatgc 667
Query: 653 acgatacattctgaccagtaaaggactggctgcaatgctggagaagtataagaactatga 712
|||||||| ||||||| || || |||| || |||||||| ||||| |||||||||||
Sbjct: 668 tcgatacatattgaccagcaaggggatggcagctatgctggacaagtacaagaactatga 727
Query: 713 ctttgggcggtgcccgcgtgtttactgctgtggtcaaccatgcctgccagttggacaatc 772
||||||| | ||||| | ||| |||||||||| ||||| ||||| || ||||| |||||
Sbjct: 728 ctttgggagatgcccaagagttcactgctgtggacaaccttgccttcctgttggtcaatc 787
Query: 773 agacat 778
||||||
Sbjct: 788 agacat 793
Score = 85.7 bits (43), Expect = 4e-015
Identities = 88/103 (85%)
Strand = Plus / Plus
Query: 445 taagagggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttcaacc 504
||||||| ||||| ||||| |||||||| |||||||| ||||| ||||| ||||| ||||
Sbjct: 475 taagaggaaatgaattcttttgtgaagtggatgatgattacatacaagatgactttaacc 534
Query: 505 tttgtggcctcagcagccaagttccttattatgattatgctct 547
| ||||| | |||| ||||||||||||||||| ||||||||
Sbjct: 535 tctgtgggttaagcactcaagttccttattatgactatgctct 577
>gb|CF237076.1|CF237076 PtajxtjxoF4F0412 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 607
Score = 127 bits (64), Expect = 1e-027
Identities = 164/199 (82%)
Strand = Plus / Plus
Query: 390 gatgttagtggctctgatggagaagacacctcgtggatttcatggtattgcaacttaaga 449
||||||| ||| ||||||||| | ||||| || ||||| ||||||| |||||| || ||
Sbjct: 409 gatgttantggntctgatgganatgacacatcttggatctcatggttttgcaatttgcga 468
Query: 450 gggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttcaacctttgt 509
|| ||||| || ||||||||||| |||||||| |||||||| || || || || |||||
Sbjct: 469 ggaaatgaatttttctgtgaagttgatgatgagtacattcaggatgattttaatctttgn 528
Query: 510 ggcctcagcagccaagttccttattatgattatgctctcgatctcattttagatattgaa 569
|| || ||||| |||||||| || |||||||||||||| ||||| || || ||| |||||
Sbjct: 529 ggactgagcagtcaagttccatactatgattatgctcttgatcttatattggatgttgaa 588
Query: 570 tcatctcatggtgatatgt 588
|| ||||||| |||||||
Sbjct: 589 tctnctcatggggatatgt 607
>gb|AI162104.1|AI162104 A012P24U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 608
Score = 115 bits (58), Expect = 5e-024
Identities = 157/190 (82%)
Strand = Plus / Plus
Query: 390 gatgttagtggctctgatggagaagacacctcgtggatttcatggtattgcaacttaaga 449
||||||||||| || |||||||| || || || ||||| ||||||| |||||| |||||
Sbjct: 264 gatgttagtggttccgatggagatgagacgtcatggatctcatggttttgcaatctaaga 323
Query: 450 gggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttcaacctttgt 509
|||||||| ||||| |||||||| |||||||| ||| | ||||| || || ||||| |||
Sbjct: 324 gggaatgaattcttttgtgaagttgatgatgattacctacaagatgattttaacctctgt 383
Query: 510 ggcctcagcagccaagttccttattatgattatgctctcgatctcattttagatattgaa 569
|| | ||||| |||||||| || || |||||||| || ||| | ||||| |||||||||
Sbjct: 384 gggttaagcagtcaagttccatactacgattatgcccttgatttgattttggatattgaa 443
Query: 570 tcatctcatg 579
|| |||||||
Sbjct: 444 tcctctcatg 453
>gb|BU881112.1|BU881112 UM58TG08 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 608
Score = 115 bits (58), Expect = 5e-024
Identities = 157/190 (82%)
Strand = Plus / Plus
Query: 390 gatgttagtggctctgatggagaagacacctcgtggatttcatggtattgcaacttaaga 449
||||||||||| || |||||||| || || |||||||| ||||||| ||||| |||||
Sbjct: 302 gatgttagtggttccgatggagatgagacgtcgtggatctcatggttttgcagtctaaga 361
Query: 450 gggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttcaacctttgt 509
|||||||| ||||| |||| ||| |||||||| ||||| ||||| || || ||||| |||
Sbjct: 362 gggaatgaattcttttgtggagttgatgatgattacatacaagatgattttaacctctgt 421
Query: 510 ggcctcagcagccaagttccttattatgattatgctctcgatctcattttagatattgaa 569
|| | ||||| |||||||| || || |||||||| || ||| | ||||| |||||||||
Sbjct: 422 gggttaagcagtcaagttccatactacgattatgcccttgatttgattttggatattgaa 481
Query: 570 tcatctcatg 579
|| |||||||
Sbjct: 482 tcctctcatg 491
Score = 58.0 bits (29), Expect = 9e-007
Identities = 80/97 (82%)
Strand = Plus / Plus
Query: 615 gaatcagctgcagagatgctttatgggctgatccatgcacgatacattctgaccagtaaa 674
||||| || ||||||||||||||||| |||| ||||| ||||| || ||||||| |||
Sbjct: 512 gaatctgcagcagagatgctttatggattgattcatgctcgatatatattgaccagcaaa 571
Query: 675 ggactggctgcaatgctggagaagtataagaactatg 711
|| || | || |||||||||||||| || |||||||
Sbjct: 572 gggatgacagctatgctggagaagtacaaaaactatg 608
>gb|CV266058.1|CV266058 WS02028.B21_P24 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02028_P24 3', mRNA sequence
Length = 760
Score = 115 bits (58), Expect = 5e-024
Identities = 238/298 (79%)
Strand = Plus / Minus
Query: 687 atgctggagaagtataagaactatgactttgggcggtgcccgcgtgtttactgctgtggt 746
|||||||||||||| || |||||||||||||| | ||||| | |||| |||||||||
Sbjct: 742 atgctggagaagtacaaaaactatgactttggaagatgccccagagtttgctgctgtgga 683
Query: 747 caaccatgcctgccagttggacaatcagacatccatcgatctagtaccgtgaagatatac 806
||||| ||||| |||||||| ||||||||||| | ||| || || || || || |||| |
Sbjct: 682 caaccttgccttccagttggtcaatcagacattcctcggtcaagcactgttaaaatatgc 623
Query: 807 tgccccaagtgtgaagacatctactacccacggtccaagtaccaaggcaacatcgacggc 866
||||||| ||||| || || ||||||||||| |||||||| ||||||||||| || ||
Sbjct: 622 tgccccagatgtgatgatatatactacccacgttccaagtatcaaggcaacattgatgga 563
Query: 867 gcatactttgggacaacgttccctcatctgttcctgatgacatacgagcacctcaagcca 926
|| || ||||| || || || ||||| ||||| | ||||| ||| ||| ||||||||
Sbjct: 562 gcttattttggaacgacatttcctcacctgtttttaatgactcacgggcatctcaagccg 503
Query: 927 cagaagctctcgcagcgctatgttcctcgtgtctttggcttcaagctccacaagccat 984
|| ||| | |||| |||||||||| | || ||||| |||||||| ||||| ||||
Sbjct: 502 caaaaggtagtgcagacctatgttcctagagtatttgggttcaagctacacaaaccat 445
>gb|CV233095.1|CV233095 WS0199.B21_J21 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0199_J21 3', mRNA sequence
Length = 581
Score = 109 bits (55), Expect = 3e-022
Identities = 163/199 (81%)
Strand = Plus / Minus
Query: 733 tttactgctgtggtcaaccatgcctgccagttggacaatcagacatccatcgatctagta 792
|||| |||||||| || || ||||| |||||||| ||||||||||| | ||| |||||||
Sbjct: 581 tttattgctgtggacagccctgccttccagttggtcaatcagacattcctcgttctagta 522
Query: 793 ccgtgaagatatactgccccaagtgtgaagacatctactacccacggtccaagtaccaag 852
| || || || ||||| || || |||||||||||||| ||||| || |||||||| ||||
Sbjct: 521 ctgtcaaaatctactgtccaaaatgtgaagacatctattaccctcgatccaagtatcaag 462
Query: 853 gcaacatcgacggcgcatactttgggacaacgttccctcatctgttcctgatgacatacg 912
||||||| || || || || ||||| || || |||||||| || || |||||||||| |
Sbjct: 461 gcaacattgatggagcttattttggaaccacattccctcacctatttttgatgacatatg 402
Query: 913 agcacctcaagccacagaa 931
||||| |||||||||||
Sbjct: 401 gacacctaaagccacagaa 383
>gb|BI138468.1|BI138468 F107P19Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 428
Score = 99.6 bits (50), Expect = 3e-019
Identities = 143/174 (82%)
Strand = Plus / Plus
Query: 759 ccagttggacaatcagacatccatcgatctagtaccgtgaagatatactgccccaagtgt 818
|||||||| ||||||||||| | |||||| ||||| || || || ||||| || || |||
Sbjct: 3 ccagttggtcaatcagacattcctcgatcaagtactgtcaaaatctactgtccaaaatgt 62
Query: 819 gaagacatctactacccacggtccaagtaccaaggcaacatcgacggcgcatactttggg 878
||||||||||| ||||| || |||||||| ||||||||||| || || || || |||||
Sbjct: 63 gaagacatctattaccctcgatccaagtatcaaggcaacattgatggagcttattttgga 122
Query: 879 acaacgttccctcatctgttcctgatgacatacgagcacctcaagccacagaag 932
||||| || ||||| || || |||||||||| | ||||| ||||||||||||
Sbjct: 123 acaacatttcctcacctatttttgatgacatatggtcacctaaagccacagaag 176
>gb|BU817230.1|BU817230 UA14CPE01 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 401
Score = 95.6 bits (48), Expect = 4e-018
Identities = 90/104 (86%)
Strand = Plus / Plus
Query: 390 gatgttagtggctctgatggagaagacacctcgtggatttcatggtattgcaacttaaga 449
||||||||||| || |||||||| || || |||||||| ||||||| |||||| |||||
Sbjct: 295 gatgttagtggttccgatggagatgagacgtcgtggatctcatggttttgcaatctaaga 354
Query: 450 gggaatgagttcttctgtgaagtcgatgatgactacattcaaga 493
|||||||| ||||| |||||||| |||||||| ||||| |||||
Sbjct: 355 gggaatgaattcttttgtgaagttgatgatgattacatacaaga 398
>gb|CK088378.1|CK088378 A050P79.3pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A050P79 3', mRNA sequence
Length = 646
Score = 89.7 bits (45), Expect = 3e-016
Identities = 129/157 (82%)
Strand = Plus / Minus
Query: 828 tactacccacggtccaagtaccaaggcaacatcgacggcgcatactttgggacaacgttc 887
||||||||||| |||||||| ||||||||||| || || ||||| |||||||| |||||
Sbjct: 595 tactacccacgttccaagtatcaaggcaacattgatggagcatattttgggacgacgttt 536
Query: 888 cctcatctgttcctgatgacatacgagcacctcaagccacagaagctctcgcagcgctat 947
||||| |||||| | ||||| || | ||| ||||||||||| ||| | |||| |||||
Sbjct: 535 cctcacctgttcttaatgacttatgggcatctcaagccacaaaaggtagtgcagagctat 476
Query: 948 gttcctcgtgtctttggcttcaagctccacaagccat 984
|||||| | || ||||| |||||| | ||||| ||||
Sbjct: 475 gttcctagagtatttgggttcaagatacacaaaccat 439
>gb|DT470772.1|DT470772 WS01210.BR_M22 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01210_M22 5', mRNA sequence
Length = 682
Score = 85.7 bits (43), Expect = 4e-015
Identities = 88/103 (85%)
Strand = Plus / Plus
Query: 445 taagagggaatgagttcttctgtgaagtcgatgatgactacattcaagacgacttcaacc 504
||||||| ||||| ||||| |||||||| |||||||| ||||| ||||| ||||| ||||
Sbjct: 476 taagaggaaatgaattcttttgtgaagtggatgatgattacatacaagatgactttaacc 535
Query: 505 tttgtggcctcagcagccaagttccttattatgattatgctct 547
| ||||| | |||| ||||||||||||||||| ||||||||
Sbjct: 536 tctgtgggttaagcactcaagttccttattatgactatgctct 578
Score = 54.0 bits (27), Expect = 1e-005
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 615 gaatcagctgcagagatgctttatgggctgatccatgcacgatacat 661
||||| || ||||||||||||||||| ||||| ||||| ||||||||
Sbjct: 630 gaatctgcagcagagatgctttatggactgattcatgctcgatacat 676
>gb|CX182094.1|CX182094 E09_45-67_09.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 648
Score = 65.9 bits (33), Expect = 4e-009
Identities = 177/225 (78%)
Strand = Plus / Minus
Query: 760 cagttggacaatcagacatccatcgatctagtaccgtgaagatatactgccccaagtgtg 819
||||||| ||||||||||| | ||| || || || || || |||| |||||||| ||||
Sbjct: 648 cagttggtcaatcagacattcctcggtcaagcactgttaaaatatgctgccccagatgtg 589
Query: 820 aagacatctactacccacggtccaagtaccaaggcaacatcgacggcgcatactttggga 879
| || || ||||||||||| |||||||| ||||||||||| || || || || ||||| |
Sbjct: 588 atgatatatactacccacgttccaagtatcaaggcaacattgatggagcttattttggaa 529
Query: 880 caacgttccctcatctgttcctgatgacatacgagcacctcaagccacagaagctctcgc 939
| || || ||||| ||||| | ||||| ||| ||| |||||||| || ||| | ||
Sbjct: 528 cgacatttcctcacctgtttttaatgactcacgggcatctcaagccgcaaaaggtagtgc 469
Query: 940 agcgctatgttcctcgtgtctttggcttcaagctccacaagccat 984
|| |||||||||| | || ||||| |||||||| ||||| ||||
Sbjct: 468 agacctatgttcctagagtatttgggttcaagctacacaaaccat 424
>gb|BU832704.1|BU832704 T037C08 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 682
Score = 58.0 bits (29), Expect = 9e-007
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 390 gatgttagtggctctgatggagaagacacctcgtggatttcatggtattgcaacttaaga 449
||||||||||| ||||||||||| || || || ||||| ||||||| |||||| || |
Sbjct: 586 gatgttagtggttctgatggagatgatacatcttggatctcatggttttgcaatttgcgt 645
Query: 450 gggaatgagttcttctgtgaagtcgatga 478
|| ||||| || ||||||||||| |||||
Sbjct: 646 ggaaatgaatttttctgtgaagttgatga 674
>gb|CK092746.1|CK092746 G093P46.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G093P46 3', mRNA sequence
Length = 700
Score = 58.0 bits (29), Expect = 9e-007
Identities = 93/113 (82%), Gaps = 1/113 (0%)
Strand = Plus / Minus
Query: 819 gaagacatctactacccacggtccaagtaccaaggcaacatcgacggcgcatactttggg 878
||||||||||| ||||| || |||||||| ||||||||||| || || || || |||||
Sbjct: 522 gaagacatcta-taccctcgatccaagtatcaaggcaacattgatggagcttattttgga 464
Query: 879 acaacgttccctcatctgttcctgatgacatacgagcacctcaagccacagaa 931
|| || |||||||| || || |||||||||| | ||||| |||||||||||
Sbjct: 463 accacattccctcacctatttttgatgacatatggacacctaaagccacagaa 411
>gb|BU871450.1|BU871450 Q030G04 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 674
Score = 50.1 bits (25), Expect = 2e-004
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 390 gatgttagtggctctgatggagaagacacctcgtggatttcatggtattgcaa 442
||||||||||| ||||||||||| || || || ||||| ||||||| ||||||
Sbjct: 610 gatgttagtggttctgatggagatgatacatcttggatctcatggttttgcaa 662
>gb|BU898310.1|BU898310 X078F06 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 609
Score = 50.1 bits (25), Expect = 2e-004
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 390 gatgttagtggctctgatggagaagacacctcgtggatttcatggtattgcaa 442
||||||||||| ||||||||||| || || || ||||| ||||||| ||||||
Sbjct: 545 gatgttagtggttctgatggagatgatacatcttggatctcatggttttgcaa 597
>gb|BP929350.1|BP929350 BP929350 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-096_K06.f 5', mRNA sequence
Length = 181
Score = 40.1 bits (20), Expect = 0.22
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 83 gtgagtgtgtgtgagaggca 102
||||||||||||||||||||
Sbjct: 81 gtgagtgtgtgtgagaggca 62
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 140,332
Number of Sequences: 369679
Number of extensions: 140332
Number of successful extensions: 39106
Number of sequences better than 0.5: 43
Number of HSP's better than 0.5 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 39009
Number of HSP's gapped (non-prelim): 92
length of query: 1385
length of database: 203,408,664
effective HSP length: 19
effective length of query: 1366
effective length of database: 196,384,763
effective search space: 268261586258
effective search space used: 268261586258
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)