BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2478065.2.2
(688 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CV232097.1|CV232097 WS0196.B21_I16 PT-DX-N-A-10 Populus ... 129 2e-028
gb|CV247914.1|CV247914 WS01119.B21_M10 PT-P-FL-A-2 Populus ... 129 2e-028
gb|CV250041.1|CV250041 WS01126.B21_C07 PT-P-FL-A-2 Populus ... 129 2e-028
gb|DT494903.1|DT494903 WS01119.BR_M10 PT-P-FL-A-2 Populus t... 129 2e-028
gb|DT494922.1|DT494922 WS01119.BR_N05 PT-P-FL-A-2 Populus t... 129 2e-028
gb|DT497326.1|DT497326 WS01126.BR_C07 PT-P-FL-A-2 Populus t... 129 2e-028
gb|AI167015.1|AI167015 xylem.est.790 Poplar xylem Lambda ZA... 127 6e-028
gb|CN520387.1|CN520387 GQ0108.B3_F17 GQ010 Populus trichoca... 127 6e-028
gb|CV247052.1|CV247052 WS01116.B21_N16 PT-P-FL-A-2 Populus ... 127 6e-028
gb|CV248787.1|CV248787 WS01121.B21_P09 PT-P-FL-A-2 Populus ... 127 6e-028
gb|CV251158.1|CV251158 WS0116.B21_A14 PT-P-FL-A-2 Populus t... 127 6e-028
gb|CV252789.1|CV252789 PX0015.B21_P21 PT-X-FL-A-1 Populus t... 127 6e-028
gb|CV274402.1|CV274402 WS0173.B21_C17 PTxD-NR-A-8 Populus t... 127 6e-028
gb|DT493658.1|DT493658 WS01116.BR_A18 PT-P-FL-A-2 Populus t... 127 6e-028
gb|DT493915.1|DT493915 WS01116.BR_N16 PT-P-FL-A-2 Populus t... 127 6e-028
gb|DT495609.1|DT495609 WS01120.BR_P17 PT-P-FL-A-2 Populus t... 127 6e-028
gb|DT495948.1|DT495948 WS01121.BR_P09 PT-P-FL-A-2 Populus t... 127 6e-028
gb|DT496301.1|DT496301 WS01123.BR_A08 PT-P-FL-A-2 Populus t... 127 6e-028
gb|DT498669.1|DT498669 WS0116.BR_A14 PT-P-FL-A-2 Populus tr... 127 6e-028
gb|DT499433.1|DT499433 WS0118.BR_E16 PT-P-FL-A-2 Populus tr... 127 6e-028
gb|DT500600.1|DT500600 PX0015.BR_P21 PT-X-FL-A-1 Populus tr... 127 6e-028
gb|CA926504.1|CA926504 MTU6CR.P15.G11 Aspen root cDNA Libra... 125 2e-027
gb|CA926986.1|CA926986 MTU6CR.P3.E10 Aspen root cDNA Librar... 125 2e-027
gb|AI161807.1|AI161807 A007P29U Hybrid aspen plasmid librar... 123 9e-027
gb|BU827421.1|BU827421 K001P96P Populus apical shoot cDNA l... 123 9e-027
gb|BU830155.1|BU830155 T004F03 Populus apical shoot cDNA li... 123 9e-027
gb|BU833249.1|BU833249 T044B09 Populus apical shoot cDNA li... 123 9e-027
gb|CK098893.1|CK098893 A041P32.5pR Hybrid aspen plasmid lib... 123 9e-027
gb|CV251614.1|CV251614 WS0117.B21_L05 PT-P-FL-A-2 Populus t... 123 9e-027
gb|CV253282.1|CV253282 WS0221.B21_H08 PTxD-ICC-A-12 Populus... 123 9e-027
gb|CA825906.1|CA825906 R69E04 two-month-old roots from clon... 121 4e-026
gb|CF228162.1|CF228162 PtaXM0009F5F0511 Poplar cDNA library... 121 4e-026
gb|CF231105.1|CF231105 PtaC0017D3D0307 Poplar cDNA library ... 119 1e-025
gb|CV250615.1|CV250615 WS0114.B21_C23 PT-P-FL-A-2 Populus t... 119 1e-025
gb|DT498031.1|DT498031 WS0114.BR_C23 PT-P-FL-A-2 Populus tr... 119 1e-025
gb|CA926827.1|CA926827 MTU6CR.P1.F04 Aspen root cDNA Librar... 117 6e-025
gb|CK116797.1|CK116797 B017P75 Hybrid aspen plasmid library... 117 6e-025
gb|CX655168.1|CX655168 PO02030H05 Poplar SC cDNA library Po... 117 6e-025
gb|BU817037.1|BU817037 UA12BPC08 Populus tremula cambium cD... 115 2e-024
gb|BU831446.1|BU831446 T021F02 Populus apical shoot cDNA li... 115 2e-024
gb|BU873488.1|BU873488 Q056B02 Populus flower cDNA library ... 115 2e-024
gb|BU873536.1|BU873536 Q056F04 Populus flower cDNA library ... 115 2e-024
gb|BU874553.1|BU874553 Q069C12 Populus flower cDNA library ... 115 2e-024
gb|AJ778425.1|AJ778425 AJ778425 Populus euphratica cambium ... 113 9e-024
gb|CX653923.1|CX653923 PO02009E01 Poplar SC cDNA library Po... 113 9e-024
gb|CV251835.1|CV251835 WS0118.B21_E16 PT-P-FL-A-2 Populus t... 111 4e-023
gb|BU886211.1|BU886211 R042B09 Populus root cDNA library Po... 109 1e-022
gb|CF231585.1|CF231585 PtaC0023C12C1206 Poplar cDNA library... 109 1e-022
gb|CK088469.1|CK088469 A054P39.3pR Hybrid aspen plasmid lib... 109 1e-022
gb|CK099156.1|CK099156 A054P39.5pR Hybrid aspen plasmid lib... 109 1e-022
gb|CV275592.1|CV275592 WS0176.B21_P14 PTxD-NR-A-8 Populus t... 109 1e-022
gb|BU875127.1|BU875127 V002F07 Populus flower cDNA library ... 107 6e-022
gb|CA932012.1|CA932012 MTU4TA.P25.G08 Aspen apex cDNA Libra... 107 6e-022
gb|CK110799.1|CK110799 P032E12 Populus petioles cDNA librar... 107 6e-022
gb|BU817064.1|BU817064 UA12BPE11 Populus tremula cambium cD... 105 2e-021
gb|BU828997.1|BU828997 K032P31P Populus apical shoot cDNA l... 105 2e-021
gb|CA925711.1|CA925711 MTU7TL.P5.A02 Aspen leaf cDNA Librar... 105 2e-021
gb|CA928731.1|CA928731 MTU6TR.P6.B05 Aspen root cDNA Librar... 105 2e-021
gb|CA928999.1|CA928999 MTU6TR.P9.C12 Aspen root cDNA Librar... 105 2e-021
gb|CF228489.1|CF228489 PtaXM0013F11F1111 Poplar cDNA librar... 105 2e-021
gb|CF232882.1|CF232882 PtaJXO0016H5H0515 Poplar cDNA librar... 105 2e-021
gb|CF235834.1|CF235834 PtaJXT0027F10F1012 Poplar cDNA libra... 105 2e-021
gb|CV250835.1|CV250835 WS0114.B21_O22 PT-P-FL-A-2 Populus t... 105 2e-021
gb|CV250853.1|CV250853 WS0115.B21_A06 PT-P-FL-A-2 Populus t... 105 2e-021
gb|CV251127.1|CV251127 WS0115.B21_O19 PT-P-FL-A-2 Populus t... 105 2e-021
gb|CV251721.1|CV251721 WS0118.B21.1_E09 PT-P-FL-A-2 Populus... 105 2e-021
gb|CV252011.1|CV252011 WS0119.B21_A21 PT-P-FL-A-2 Populus t... 105 2e-021
gb|CV264360.1|CV264360 WS02024.B21_F03 PTxN-IB-N-A-11 Popul... 105 2e-021
gb|CX654777.1|CX654777 PO02059E08 Poplar SC cDNA library Po... 105 2e-021
gb|CX658747.1|CX658747 PO01021G04 Poplar SC cDNA library Po... 105 2e-021
gb|CX659058.1|CX659058 PO01026A08 Poplar SC cDNA library Po... 105 2e-021
gb|DT498292.1|DT498292 WS0114.BR_O22 PT-P-FL-A-2 Populus tr... 105 2e-021
gb|DT498318.1|DT498318 WS0115.BR_A06 PT-P-FL-A-2 Populus tr... 105 2e-021
gb|DT498636.1|DT498636 WS0115.BR_O19 PT-P-FL-A-2 Populus tr... 105 2e-021
gb|DT499238.1|DT499238 WS0117.BR_L05 PT-P-FL-A-2 Populus tr... 105 2e-021
gb|DT499426.1|DT499426 WS0118.BR_E09 PT-P-FL-A-2 Populus tr... 105 2e-021
gb|DT524899.1|DT524899 WS02043.C21_O07 PTxN-IB-N-A-11 Popul... 105 2e-021
gb|DT525314.1|DT525314 WS02045.C21_A08 PTxN-IB-N-A-11 Popul... 105 2e-021
gb|CA925660.1|CA925660 MTU7TL.P4.D01 Aspen leaf cDNA Librar... 103 9e-021
gb|BU816882.1|BU816882 UA10BPD09 Populus tremula cambium cD... 101 3e-020
gb|CK317963.1|CK317963 B9P03g10 Populus stem seasonal libra... 101 3e-020
gb|AI161780.1|AI161780 A006P70U Hybrid aspen plasmid librar... 100 1e-019
gb|AI163134.1|AI163134 A034P56U Hybrid aspen plasmid librar... 100 1e-019
gb|AI165588.1|AI165588 A086p38u Hybrid aspen plasmid librar... 100 1e-019
gb|CA927258.1|CA927258 MTU6CR.P6.H04 Aspen root cDNA Librar... 100 1e-019
gb|CF227730.1|CF227730 PtaXM0003H12H1216 Poplar cDNA librar... 100 1e-019
gb|CF231696.1|CF231696 PtaC0024E8E0810 Poplar cDNA library ... 100 1e-019
gb|AJ773887.1|AJ773887 AJ773887 Populus euphratica shoot 3-... 100 1e-019
gb|AJ774638.1|AJ774638 AJ774638 Populus euphratica shoot 3-... 100 1e-019
gb|AJ774747.1|AJ774747 AJ774747 Populus euphratica shoot 3-... 100 1e-019
gb|AJ777107.1|AJ777107 AJ777107 Populus euphratica root 3-6... 100 1e-019
gb|AJ779371.1|AJ779371 AJ779371 Populus euphratica root 3-6... 100 1e-019
gb|AJ779434.1|AJ779434 AJ779434 Populus euphratica root 3-6... 100 1e-019
gb|AJ779693.1|AJ779693 AJ779693 Populus euphratica root 3-6... 100 1e-019
gb|CA928738.1|CA928738 MTU6TR.P6.C03 Aspen root cDNA Librar... 98 5e-019
gb|CF231666.1|CF231666 PtaC0024C11C1105 Poplar cDNA library... 98 5e-019
gb|CX654473.1|CX654473 PO02008B03 Poplar SC cDNA library Po... 98 5e-019
gb|BU894933.1|BU894933 X017A09 Populus wood cDNA library Po... 96 2e-018
gb|CA928170.1|CA928170 MTU6TR.P17.E09 Aspen root cDNA Libra... 94 8e-018
gb|AI163128.1|AI163128 A034P48U Hybrid aspen plasmid librar... 92 3e-017
gb|AJ777108.1|AJ777108 AJ777108 Populus euphratica root 3-6... 92 3e-017
gb|CX657249.1|CX657249 PO02036H03 Poplar SC cDNA library Po... 92 3e-017
gb|AI163408.1|AI163408 A041P32U Hybrid aspen plasmid librar... 90 1e-016
gb|CA930329.1|CA930329 MTU4CA.P21.C04 Aspen apex cDNA Libra... 90 1e-016
gb|CK117169.1|CK117169 B029P54 Hybrid aspen plasmid library... 90 1e-016
gb|CA822149.1|CA822149 R04C11 two-month-old roots from clon... 82 3e-014
gb|CA928948.1|CA928948 MTU6TR.P8.G02 Aspen root cDNA Librar... 80 1e-013
gb|CK116383.1|CK116383 B011P07 Hybrid aspen plasmid library... 78 5e-013
gb|CV248499.1|CV248499 WS01120.B21_P17 PT-P-FL-A-2 Populus ... 78 5e-013
gb|BU822259.1|BU822259 UB34DPE11 Populus tremula cambium cD... 76 2e-012
gb|DT504375.1|DT504375 WS01313.B21_B06 PTxD-IL-FL-A-4 Popul... 70 1e-010
gb|CF120113.1|CF120113 MTU8DD.P1.E02 Aspen leaf mRNA differ... 68 5e-010
gb|AI164059.1|AI164059 A054P39U Hybrid aspen plasmid librar... 58 5e-007
gb|CK098819.1|CK098819 A034P48.5pR Hybrid aspen plasmid lib... 58 5e-007
gb|CX657407.1|CX657407 PO02045B02 Poplar SC cDNA library Po... 50 1e-004
gb|BU875126.1|BU875126 V002F06 Populus flower cDNA library ... 46 0.002
gb|BU823934.1|BU823934 UB58DPC09 Populus tremula cambium cD... 44 0.007
gb|CX658412.1|CX658412 PO01034G11 Poplar SC cDNA library Po... 44 0.007
gb|DT508647.1|DT508647 WS02421.BR_I19 PTxD-ICC-N-A-14 Popul... 38 0.43
gb|DT513254.1|DT513254 WS02421.B21_I19 PTxD-ICC-N-A-14 Popu... 38 0.43
>gb|CV232097.1|CV232097 WS0196.B21_I16 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0196_I16 3', mRNA sequence
Length = 624
Score = 129 bits (65), Expect = 2e-028
Identities = 251/313 (80%)
Strand = Plus / Minus
Query: 212 tcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttcaagg 271
||||| ||| ||||||||| || || ||||| || || |||||| | | ||||||||||
Sbjct: 527 tcaagacaaactggcgcagaccgaaaggtattgattctcgtgtccgaagaaagttcaagg 468
Query: 272 gatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatcttc 331
||||||| | ||||| |||||||| ||||| |||||||||||||| | || |||||||
Sbjct: 467 gatgcactctaatgcccaacattggctatggttctgacaagaagactcgtcattatcttc 408
Query: 332 ccaacaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttgcttatgatgc 391
| ||| || ||||| ||||| || |||||||| ||||| || | || |||||||
Sbjct: 407 caaacggtttcaagaaatttgttgtccacaatgtcaaggagcttgaagtactgatgatgc 348
Query: 392 acaacaggacatactgtgctgaaatcgcacacaacgtgtccactaagaagcgcaaggaaa 451
|||||||||| ||||| ||||| || ||||| || ||||| || | |||| | || || |
Sbjct: 347 acaacaggacttactgcgctgagatagcacataatgtgtcaacaaggaagagaaaagaga 288
Query: 452 tcgtggagcgagctgctcagcttgacattgtggtcaccaataagcttgcccgtctccgca 511
|||||||||||||||||||||||||| |||| || || || ||||||||| | | ||||
Sbjct: 287 tcgtggagcgagctgctcagcttgacgttgttgttacgaacaagcttgccaggttgcgca 228
Query: 512 gccaggaagatga 524
||||||| |||||
Sbjct: 227 gccaggaggatga 215
>gb|CV247914.1|CV247914 WS01119.B21_M10 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01119_M10 3', mRNA sequence
Length = 702
Score = 129 bits (65), Expect = 2e-028
Identities = 251/313 (80%)
Strand = Plus / Minus
Query: 212 tcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttcaagg 271
||||| ||| ||||||||| || || ||||| || || |||||| | | ||||||||||
Sbjct: 570 tcaagacaaactggcgcagaccgaaaggtattgattctcgtgtccgaagaaagttcaagg 511
Query: 272 gatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatcttc 331
||||||| | ||||| |||||||| ||||| |||||||||||||| | || |||||||
Sbjct: 510 gatgcactctaatgcccaacattggctatggttctgacaagaagactcgtcattatcttc 451
Query: 332 ccaacaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttgcttatgatgc 391
| ||| || ||||| ||||| || |||||||| ||||| || | || |||||||
Sbjct: 450 caaacggtttcaagaaatttgttgtccacaatgtcaaggagcttgaagtactgatgatgc 391
Query: 392 acaacaggacatactgtgctgaaatcgcacacaacgtgtccactaagaagcgcaaggaaa 451
|||||||||| ||||| ||||| || ||||| || ||||| || | |||| | || || |
Sbjct: 390 acaacaggacttactgcgctgagatagcacataatgtgtcaacaaggaagagaaaagaga 331
Query: 452 tcgtggagcgagctgctcagcttgacattgtggtcaccaataagcttgcccgtctccgca 511
|||||||||||||||||||||||||| |||| || || || ||||||||| | | ||||
Sbjct: 330 tcgtggagcgagctgctcagcttgacgttgttgttacgaacaagcttgccaggttgcgca 271
Query: 512 gccaggaagatga 524
||||||| |||||
Sbjct: 270 gccaggaggatga 258
>gb|CV250041.1|CV250041 WS01126.B21_C07 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01126_C07 3', mRNA sequence
Length = 644
Score = 129 bits (65), Expect = 2e-028
Identities = 251/313 (80%)
Strand = Plus / Minus
Query: 212 tcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttcaagg 271
||||| ||| ||||||||| || || ||||| || || |||||| | | ||||||||||
Sbjct: 543 tcaagacaaactggcgcagaccgaaaggtattgattctcgtgtccgaagaaagttcaagg 484
Query: 272 gatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatcttc 331
||||||| | ||||| |||||||| ||||| |||||||||||||| | || |||||||
Sbjct: 483 gatgcactctaatgcccaacattggctatggttctgacaagaagactcgtcattatcttc 424
Query: 332 ccaacaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttgcttatgatgc 391
| ||| || ||||| ||||| || |||||||| ||||| || | || |||||||
Sbjct: 423 caaacggtttcaagaaatttgttgtccacaatgtcaaggagcttgaagtactgatgatgc 364
Query: 392 acaacaggacatactgtgctgaaatcgcacacaacgtgtccactaagaagcgcaaggaaa 451
|||||||||| ||||| ||||| || ||||| || ||||| || | |||| | || || |
Sbjct: 363 acaacaggacttactgcgctgagatagcacataatgtgtcaacaaggaagagaaaagaga 304
Query: 452 tcgtggagcgagctgctcagcttgacattgtggtcaccaataagcttgcccgtctccgca 511
|||||||||||||||||||||||||| |||| || || || ||||||||| | | ||||
Sbjct: 303 tcgtggagcgagctgctcagcttgacgttgttgttacgaacaagcttgccaggttgcgca 244
Query: 512 gccaggaagatga 524
||||||| |||||
Sbjct: 243 gccaggaggatga 231
>gb|DT494903.1|DT494903 WS01119.BR_M10 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01119_M10 5', mRNA sequence
Length = 683
Score = 129 bits (65), Expect = 2e-028
Identities = 251/313 (80%)
Strand = Plus / Plus
Query: 212 tcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttcaagg 271
||||| ||| ||||||||| || || ||||| || || |||||| | | ||||||||||
Sbjct: 128 tcaagacaaactggcgcagaccgaaaggtattgattctcgtgtccgaagaaagttcaagg 187
Query: 272 gatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatcttc 331
||||||| | ||||| |||||||| ||||| |||||||||||||| | || |||||||
Sbjct: 188 gatgcactctaatgcccaacattggctatggttctgacaagaagactcgtcattatcttc 247
Query: 332 ccaacaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttgcttatgatgc 391
| ||| || ||||| ||||| || |||||||| ||||| || | || |||||||
Sbjct: 248 caaacggtttcaagaaatttgttgtccacaatgtcaaggagcttgaagtactgatgatgc 307
Query: 392 acaacaggacatactgtgctgaaatcgcacacaacgtgtccactaagaagcgcaaggaaa 451
|||||||||| ||||| ||||| || ||||| || ||||| || | |||| | || || |
Sbjct: 308 acaacaggacttactgcgctgagatagcacataatgtgtcaacaaggaagagaaaagaga 367
Query: 452 tcgtggagcgagctgctcagcttgacattgtggtcaccaataagcttgcccgtctccgca 511
|||||||||||||||||||||||||| |||| || || || ||||||||| | | ||||
Sbjct: 368 tcgtggagcgagctgctcagcttgacgttgttgttacgaacaagcttgccaggttgcgca 427
Query: 512 gccaggaagatga 524
||||||| |||||
Sbjct: 428 gccaggaggatga 440
>gb|DT494922.1|DT494922 WS01119.BR_N05 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01119_N05 5', mRNA sequence
Length = 644
Score = 129 bits (65), Expect = 2e-028
Identities = 251/313 (80%)
Strand = Plus / Plus
Query: 212 tcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttcaagg 271
||||| ||| ||||||||| || || ||||| || || |||||| | | ||||||||||
Sbjct: 128 tcaagacaaactggcgcagaccgaaaggtattgattctcgtgtccgaagaaagttcaagg 187
Query: 272 gatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatcttc 331
||||||| | ||||| |||||||| ||||| |||||||||||||| | || |||||||
Sbjct: 188 gatgcactctaatgcccaacattggctatggttctgacaagaagactcgtcattatcttc 247
Query: 332 ccaacaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttgcttatgatgc 391
| ||| || ||||| ||||| || |||||||| ||||| || | || |||||||
Sbjct: 248 caaacggtttcaagaaatttgttgtccacaatgtcaaggagcttgaagtactgatgatgc 307
Query: 392 acaacaggacatactgtgctgaaatcgcacacaacgtgtccactaagaagcgcaaggaaa 451
|||||||||| ||||| ||||| || ||||| || ||||| || | |||| | || || |
Sbjct: 308 acaacaggacttactgcgctgagatagcacataatgtgtcaacaaggaagagaaaagaga 367
Query: 452 tcgtggagcgagctgctcagcttgacattgtggtcaccaataagcttgcccgtctccgca 511
|||||||||||||||||||||||||| |||| || || || ||||||||| | | ||||
Sbjct: 368 tcgtggagcgagctgctcagcttgacgttgttgttacgaacaagcttgccaggttgcgca 427
Query: 512 gccaggaagatga 524
||||||| |||||
Sbjct: 428 gccaggaggatga 440
>gb|DT497326.1|DT497326 WS01126.BR_C07 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01126_C07 5', mRNA sequence
Length = 669
Score = 129 bits (65), Expect = 2e-028
Identities = 251/313 (80%)
Strand = Plus / Plus
Query: 212 tcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttcaagg 271
||||| ||| ||||||||| || || ||||| || || |||||| | | ||||||||||
Sbjct: 127 tcaagacaaactggcgcagaccgaaaggtattgattctcgtgtccgaagaaagttcaagg 186
Query: 272 gatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatcttc 331
||||||| | ||||| |||||||| ||||| |||||||||||||| | || |||||||
Sbjct: 187 gatgcactctaatgcccaacattggctatggttctgacaagaagactcgtcattatcttc 246
Query: 332 ccaacaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttgcttatgatgc 391
| ||| || ||||| ||||| || |||||||| ||||| || | || |||||||
Sbjct: 247 caaacggtttcaagaaatttgttgtccacaatgtcaaggagcttgaagtactgatgatgc 306
Query: 392 acaacaggacatactgtgctgaaatcgcacacaacgtgtccactaagaagcgcaaggaaa 451
|||||||||| ||||| ||||| || ||||| || ||||| || | |||| | || || |
Sbjct: 307 acaacaggacttactgcgctgagatagcacataatgtgtcaacaaggaagagaaaagaga 366
Query: 452 tcgtggagcgagctgctcagcttgacattgtggtcaccaataagcttgcccgtctccgca 511
|||||||||||||||||||||||||| |||| || || || ||||||||| | | ||||
Sbjct: 367 tcgtggagcgagctgctcagcttgacgttgttgttacgaacaagcttgccaggttgcgca 426
Query: 512 gccaggaagatga 524
||||||| |||||
Sbjct: 427 gccaggaggatga 439
>gb|AI167015.1|AI167015 xylem.est.790 Poplar xylem Lambda ZAPII library Populus trichocarpa
cDNA 5', mRNA sequence
Length = 490
Score = 127 bits (64), Expect = 6e-028
Identities = 226/280 (80%)
Strand = Plus / Plus
Query: 149 agaagatcgtgaagaagcgggtcaagcagttcaagaggccccacctcgaccgctacaagt 208
|||||||||||||||||||||||||| |||||||||||||||| |||||| | | |
Sbjct: 59 agaagatcgtgaagaagcgggtcaagaagttcaagaggccccaaagtgaccgcaagattt 118
Query: 209 gcctcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttca 268
||||| ||| |||| | |||||||||||||| || || | |||||| | |||||||
Sbjct: 119 ctgtcaagacaaactggaggaggcccaagggtattgattctagggtcaggagaaagttca 178
Query: 269 agggatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatc 328
| |||||||| |||||||| |||||||| |||||||| |||||||| || | |||||||
Sbjct: 179 aaggatgcactttgatgccaaacattggttatggctccgacaagaaaactcgtcactatc 238
Query: 329 ttcccaacaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttgcttatga 388
| ||||| |||||| |||||||| |||||||| || ||||| || | || ||||
Sbjct: 239 tccccaatgggtttaaaaagtttgttgtgcacaacgtgggggagcttgaagtcctgatga 298
Query: 389 tgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||| ||||| || ||||||||||| || || ||||||||
Sbjct: 299 tgcataacagaacttactgtgctgagattgcccacaacgt 338
>gb|CN520387.1|CN520387 GQ0108.B3_F17 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0108_F17 5', mRNA sequence
Length = 588
Score = 127 bits (64), Expect = 6e-028
Identities = 226/280 (80%)
Strand = Plus / Minus
Query: 149 agaagatcgtgaagaagcgggtcaagcagttcaagaggccccacctcgaccgctacaagt 208
|||||||||||||||||||||||||| |||||||||||||||| |||||| | | |
Sbjct: 526 agaagatcgtgaagaagcgggtcaagaagttcaagaggccccaaagtgaccgcaagattt 467
Query: 209 gcctcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttca 268
||||| ||| |||| | |||||||||||||| || || | |||||| | |||||||
Sbjct: 466 ctgtcaagacaaactggaggaggcccaagggtattgattcaagggtcaggagaaagttca 407
Query: 269 agggatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatc 328
| |||||||| |||||||| |||||||| |||||||| |||||||| || | |||||||
Sbjct: 406 aaggatgcactttgatgccaaacattggttatggctccgacaagaaaactcgtcactatc 347
Query: 329 ttcccaacaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttgcttatga 388
| ||||| |||||| |||||||| |||||||| || ||||| || | || ||||
Sbjct: 346 tccccaatgggtttaaaaagtttgttgtgcacaacgtgggggagcttgaagtcctgatga 287
Query: 389 tgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||| ||||| || ||||||||||| || || ||||||||
Sbjct: 286 tgcataacagaacctactgtgctgagattgcccacaacgt 247
>gb|CV247052.1|CV247052 WS01116.B21_N16 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01116_N16 3', mRNA sequence
Length = 661
Score = 127 bits (64), Expect = 6e-028
Identities = 226/280 (80%)
Strand = Plus / Minus
Query: 149 agaagatcgtgaagaagcgggtcaagcagttcaagaggccccacctcgaccgctacaagt 208
|||||||||||||||||||||||||| |||||||||||||||| |||||| | | |
Sbjct: 593 agaagatcgtgaagaagcgggtcaagaagttcaagaggccccaaagtgaccgcaagattt 534
Query: 209 gcctcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttca 268
||||| ||| |||| | |||||||||||||| || || | |||||| | |||||||
Sbjct: 533 ctgtcaagacaaactggaggaggcccaagggtattgattctagggtcaggagaaagttca 474
Query: 269 agggatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatc 328
| |||||||| |||||||| |||||||| |||||||| |||||||| || | |||||||
Sbjct: 473 aaggatgcactttgatgccaaacattggttatggctccgacaagaaaactcgtcactatc 414
Query: 329 ttcccaacaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttgcttatga 388
| ||||| |||||| |||||||| |||||||| || ||||| || | || ||||
Sbjct: 413 tccccaatgggtttaaaaagtttgttgtgcacaacgtgggggagcttgaagtcctgatga 354
Query: 389 tgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||| ||||| || ||||||||||| || || ||||||||
Sbjct: 353 tgcataacagaacttactgtgctgagattgcccacaacgt 314
>gb|CV248787.1|CV248787 WS01121.B21_P09 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01121_P09 3', mRNA sequence
Length = 615
Score = 127 bits (64), Expect = 6e-028
Identities = 226/280 (80%)
Strand = Plus / Minus
Query: 149 agaagatcgtgaagaagcgggtcaagcagttcaagaggccccacctcgaccgctacaagt 208
|||||||||||||||||||||||||| |||||||||||||||| |||||| | | |
Sbjct: 548 agaagatcgtgaagaagcgggtcaagaagttcaagaggccccaaagtgaccgcaagattt 489
Query: 209 gcctcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttca 268
||||| ||| |||| | |||||||||||||| || || | |||||| | |||||||
Sbjct: 488 ctgtcaagacaaactggaggaggcccaagggtattgattctagggtcaggagaaagttca 429
Query: 269 agggatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatc 328
| |||||||| |||||||| |||||||| |||||||| |||||||| || | |||||||
Sbjct: 428 aaggatgcactttgatgccaaacattggttatggctccgacaagaaaactcgtcactatc 369
Query: 329 ttcccaacaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttgcttatga 388
| ||||| |||||| |||||||| |||||||| || ||||| || | || ||||
Sbjct: 368 tccccaatgggtttaaaaagtttgttgtgcacaacgtgggggagcttgaagtcctgatga 309
Query: 389 tgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||| ||||| || ||||||||||| || || ||||||||
Sbjct: 308 tgcataacagaacttactgtgctgagattgcccacaacgt 269
>gb|CV251158.1|CV251158 WS0116.B21_A14 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS0116_A14 3', mRNA sequence
Length = 601
Score = 127 bits (64), Expect = 6e-028
Identities = 226/280 (80%)
Strand = Plus / Minus
Query: 149 agaagatcgtgaagaagcgggtcaagcagttcaagaggccccacctcgaccgctacaagt 208
|||||||||||||||||||||||||| |||||||||||||||| |||||| | | |
Sbjct: 548 agaagatcgtgaagaagcgggtcaagaagttcaagaggccccaaagtgaccgcaagattt 489
Query: 209 gcctcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttca 268
||||| ||| |||| | |||||||||||||| || || | |||||| | |||||||
Sbjct: 488 ctgtcaagacaaactggaggaggcccaagggtattgattctagggtcaggagaaagttca 429
Query: 269 agggatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatc 328
| |||||||| |||||||| |||||||| |||||||| |||||||| || | |||||||
Sbjct: 428 aaggatgcactttgatgccaaacattggttatggctccgacaagaaaactcgtcactatc 369
Query: 329 ttcccaacaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttgcttatga 388
| ||||| |||||| |||||||| |||||||| || ||||| || | || ||||
Sbjct: 368 tccccaatgggtttaaaaagtttgttgtgcacaacgtgggggagcttgaagtcctgatga 309
Query: 389 tgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||| ||||| || ||||||||||| || || ||||||||
Sbjct: 308 tgcataacagaacttactgtgctgagattgcccacaacgt 269
>gb|CV252789.1|CV252789 PX0015.B21_P21 PT-X-FL-A-1 Populus trichocarpa cDNA clone
PX0015_P21 3', mRNA sequence
Length = 530
Score = 127 bits (64), Expect = 6e-028
Identities = 226/280 (80%)
Strand = Plus / Minus
Query: 149 agaagatcgtgaagaagcgggtcaagcagttcaagaggccccacctcgaccgctacaagt 208
|||||||||||||||||||||||||| |||||||||||||||| |||||| | | |
Sbjct: 449 agaagatcgtgaagaagcgggtcaagaagttcaagaggccccaaagtgaccgcaagattt 390
Query: 209 gcctcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttca 268
||||| ||| |||| | |||||||||||||| || || | |||||| | |||||||
Sbjct: 389 ctgtcaagacaaactggaggaggcccaagggtattgattctagggtcaggagaaagttca 330
Query: 269 agggatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatc 328
| |||||||| |||||||| |||||||| |||||||| |||||||| || | |||||||
Sbjct: 329 aaggatgcactttgatgccaaacattggttatggctccgacaagaaaactcgtcactatc 270
Query: 329 ttcccaacaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttgcttatga 388
| ||||| |||||| |||||||| |||||||| || ||||| || | || ||||
Sbjct: 269 tccccaatgggtttaaaaagtttgttgtgcacaacgtgggggagcttgaagtcctgatga 210
Query: 389 tgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||| ||||| || ||||||||||| || || ||||||||
Sbjct: 209 tgcataacagaacttactgtgctgagattgcccacaacgt 170
>gb|CV274402.1|CV274402 WS0173.B21_C17 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0173_C17 3', mRNA sequence
Length = 595
Score = 127 bits (64), Expect = 6e-028
Identities = 226/280 (80%)
Strand = Plus / Minus
Query: 149 agaagatcgtgaagaagcgggtcaagcagttcaagaggccccacctcgaccgctacaagt 208
|||||||||||||||||||||||||| |||||||||||||||| |||||| | | |
Sbjct: 548 agaagatcgtgaagaagcgggtcaagaagttcaagaggccccaaagtgaccgcaagattt 489
Query: 209 gcctcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttca 268
||||| ||| |||| | |||||||||||||| || || | |||||| | |||||||
Sbjct: 488 ctgtcaagacaaactggaggaggcccaagggtattgattctagggtcaggagaaagttca 429
Query: 269 agggatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatc 328
| |||||||| |||||||| |||||||| |||||||| |||||||| || | |||||||
Sbjct: 428 aaggatgcactttgatgccaaacattggttatggctccgacaagaaaactcgtcactatc 369
Query: 329 ttcccaacaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttgcttatga 388
| ||||| |||||| |||||||| |||||||| || ||||| || | || ||||
Sbjct: 368 tccccaatgggtttaaaaagtttgttgtgcacaacgtgggggagcttgaagtcctgatga 309
Query: 389 tgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||| ||||| || ||||||||||| || || ||||||||
Sbjct: 308 tgcataacagaacttactgtgctgagattgcccacaacgt 269
>gb|DT493658.1|DT493658 WS01116.BR_A18 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01116_A18 5', mRNA sequence
Length = 644
Score = 127 bits (64), Expect = 6e-028
Identities = 226/280 (80%)
Strand = Plus / Plus
Query: 149 agaagatcgtgaagaagcgggtcaagcagttcaagaggccccacctcgaccgctacaagt 208
|||||||||||||||||||||||||| |||||||||||||||| |||||| | | |
Sbjct: 87 agaagatcgtgaagaagcgggtcaagaagttcaagaggccccaaagtgaccgcaagattt 146
Query: 209 gcctcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttca 268
||||| ||| |||| | |||||||||||||| || || | |||||| | |||||||
Sbjct: 147 ctgtcaagacaaactggaggaggcccaagggtattgattctagggtcaggagaaagttca 206
Query: 269 agggatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatc 328
| |||||||| |||||||| |||||||| |||||||| |||||||| || | |||||||
Sbjct: 207 aaggatgcactttgatgccaaacattggttatggctccgacaagaaaactcgtcactatc 266
Query: 329 ttcccaacaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttgcttatga 388
| ||||| |||||| |||||||| |||||||| || ||||| || | || ||||
Sbjct: 267 tccccaatgggtttaaaaagtttgttgtgcacaacgtgggggagcttgaagtcctgatga 326
Query: 389 tgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||| ||||| || ||||||||||| || || ||||||||
Sbjct: 327 tgcataacagaacttactgtgctgagattgcccacaacgt 366
>gb|DT493915.1|DT493915 WS01116.BR_N16 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01116_N16 5', mRNA sequence
Length = 679
Score = 127 bits (64), Expect = 6e-028
Identities = 226/280 (80%)
Strand = Plus / Plus
Query: 149 agaagatcgtgaagaagcgggtcaagcagttcaagaggccccacctcgaccgctacaagt 208
|||||||||||||||||||||||||| |||||||||||||||| |||||| | | |
Sbjct: 87 agaagatcgtgaagaagcgggtcaagaagttcaagaggccccaaagtgaccgcaagattt 146
Query: 209 gcctcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttca 268
||||| ||| |||| | |||||||||||||| || || | |||||| | |||||||
Sbjct: 147 ctgtcaagacaaactggaggaggcccaagggtattgattctagggtcaggagaaagttca 206
Query: 269 agggatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatc 328
| |||||||| |||||||| |||||||| |||||||| |||||||| || | |||||||
Sbjct: 207 aaggatgcactttgatgccaaacattggttatggctccgacaagaaaactcgtcactatc 266
Query: 329 ttcccaacaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttgcttatga 388
| ||||| |||||| |||||||| |||||||| || ||||| || | || ||||
Sbjct: 267 tccccaatgggtttaaaaagtttgttgtgcacaacgtgggggagcttgaagtcctgatga 326
Query: 389 tgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||| ||||| || ||||||||||| || || ||||||||
Sbjct: 327 tgcataacagaacttactgtgctgagattgcccacaacgt 366
>gb|DT495609.1|DT495609 WS01120.BR_P17 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01120_P17 5', mRNA sequence
Length = 921
Score = 127 bits (64), Expect = 6e-028
Identities = 226/280 (80%)
Strand = Plus / Plus
Query: 149 agaagatcgtgaagaagcgggtcaagcagttcaagaggccccacctcgaccgctacaagt 208
|||||||||||||||||||||||||| |||||||||||||||| |||||| | | |
Sbjct: 87 agaagatcgtgaagaagcgggtcaagaagttcaagaggccccaaagtgaccgcaagattt 146
Query: 209 gcctcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttca 268
||||| ||| |||| | |||||||||||||| || || | |||||| | |||||||
Sbjct: 147 ctgtcaagacaaactggaggaggcccaagggtattgattctagggtcaggagaaagttca 206
Query: 269 agggatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatc 328
| |||||||| |||||||| |||||||| |||||||| |||||||| || | |||||||
Sbjct: 207 aaggatgcactttgatgccaaacattggttatggctccgacaagaaaactcgtcactatc 266
Query: 329 ttcccaacaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttgcttatga 388
| ||||| |||||| |||||||| |||||||| || ||||| || | || ||||
Sbjct: 267 tccccaatgggtttaaaaagtttgttgtgcacaacgtgggggagcttgaagtcctgatga 326
Query: 389 tgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||| ||||| || ||||||||||| || || ||||||||
Sbjct: 327 tgcataacagaacttactgtgctgagattgcccacaacgt 366
>gb|DT495948.1|DT495948 WS01121.BR_P09 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01121_P09 5', mRNA sequence
Length = 635
Score = 127 bits (64), Expect = 6e-028
Identities = 226/280 (80%)
Strand = Plus / Plus
Query: 149 agaagatcgtgaagaagcgggtcaagcagttcaagaggccccacctcgaccgctacaagt 208
|||||||||||||||||||||||||| |||||||||||||||| |||||| | | |
Sbjct: 88 agaagatcgtgaagaagcgggtcaagaagttcaagaggccccaaagtgaccgcaagattt 147
Query: 209 gcctcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttca 268
||||| ||| |||| | |||||||||||||| || || | |||||| | |||||||
Sbjct: 148 ctgtcaagacaaactggaggaggcccaagggtattgattctagggtcaggagaaagttca 207
Query: 269 agggatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatc 328
| |||||||| |||||||| |||||||| |||||||| |||||||| || | |||||||
Sbjct: 208 aaggatgcactttgatgccaaacattggttatggctccgacaagaaaactcgtcactatc 267
Query: 329 ttcccaacaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttgcttatga 388
| ||||| |||||| |||||||| |||||||| || ||||| || | || ||||
Sbjct: 268 tccccaatgggtttaaaaagtttgttgtgcacaacgtgggggagcttgaagtcctgatga 327
Query: 389 tgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||| ||||| || ||||||||||| || || ||||||||
Sbjct: 328 tgcataacagaacttactgtgctgagattgcccacaacgt 367
>gb|DT496301.1|DT496301 WS01123.BR_A08 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01123_A08 5', mRNA sequence
Length = 644
Score = 127 bits (64), Expect = 6e-028
Identities = 226/280 (80%)
Strand = Plus / Plus
Query: 149 agaagatcgtgaagaagcgggtcaagcagttcaagaggccccacctcgaccgctacaagt 208
|||||||||||||||||||||||||| |||||||||||||||| |||||| | | |
Sbjct: 87 agaagatcgtgaagaagcgggtcaagaagttcaagaggccccaaagtgaccgcaagattt 146
Query: 209 gcctcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttca 268
||||| ||| |||| | |||||||||||||| || || | |||||| | |||||||
Sbjct: 147 ctgtcaagacaaactggaggaggcccaagggtattgattctagggtcaggagaaagttca 206
Query: 269 agggatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatc 328
| |||||||| |||||||| |||||||| |||||||| |||||||| || | |||||||
Sbjct: 207 aaggatgcactttgatgccaaacattggttatggctccgacaagaaaactcgtcactatc 266
Query: 329 ttcccaacaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttgcttatga 388
| ||||| |||||| |||||||| |||||||| || ||||| || | || ||||
Sbjct: 267 tccccaatgggtttaaaaagtttgttgtgcacaacgtgggggagcttgaagtcctgatga 326
Query: 389 tgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||| ||||| || ||||||||||| || || ||||||||
Sbjct: 327 tgcataacagaacttactgtgctgagattgcccacaacgt 366
>gb|DT498669.1|DT498669 WS0116.BR_A14 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0116_A14
5', mRNA sequence
Length = 439
Score = 127 bits (64), Expect = 6e-028
Identities = 226/280 (80%)
Strand = Plus / Plus
Query: 149 agaagatcgtgaagaagcgggtcaagcagttcaagaggccccacctcgaccgctacaagt 208
|||||||||||||||||||||||||| |||||||||||||||| |||||| | | |
Sbjct: 87 agaagatcgtgaagaagcgggtcaagaagttcaagaggccccaaagtgaccgcaagattt 146
Query: 209 gcctcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttca 268
||||| ||| |||| | |||||||||||||| || || | |||||| | |||||||
Sbjct: 147 ctgtcaagacaaactggaggaggcccaagggtattgattctagggtcaggagaaagttca 206
Query: 269 agggatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatc 328
| |||||||| |||||||| |||||||| |||||||| |||||||| || | |||||||
Sbjct: 207 aaggatgcactttgatgccaaacattggttatggctccgacaagaaaactcgtcactatc 266
Query: 329 ttcccaacaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttgcttatga 388
| ||||| |||||| |||||||| |||||||| || ||||| || | || ||||
Sbjct: 267 tccccaatgggtttaaaaagtttgttgtgcacaacgtgggggagcttgaagtcctgatga 326
Query: 389 tgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||| ||||| || ||||||||||| || || ||||||||
Sbjct: 327 tgcataacagaacttactgtgctgagattgcccacaacgt 366
>gb|DT499433.1|DT499433 WS0118.BR_E16 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0118_E16
5', mRNA sequence
Length = 655
Score = 127 bits (64), Expect = 6e-028
Identities = 226/280 (80%)
Strand = Plus / Plus
Query: 149 agaagatcgtgaagaagcgggtcaagcagttcaagaggccccacctcgaccgctacaagt 208
|||||||||||||||||||||||||| |||||||||||||||| |||||| | | |
Sbjct: 87 agaagatcgtgaagaagcgggtcaagaagttcaagaggccccaaagtgaccgcaagattt 146
Query: 209 gcctcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttca 268
||||| ||| |||| | |||||||||||||| || || | |||||| | |||||||
Sbjct: 147 ctgtcaagacaaactggaggaggcccaagggtattgattctagggtcaggagaaagttca 206
Query: 269 agggatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatc 328
| |||||||| |||||||| |||||||| |||||||| |||||||| || | |||||||
Sbjct: 207 aaggatgcactttgatgccaaacattggttatggctccgacaagaaaactcgtcactatc 266
Query: 329 ttcccaacaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttgcttatga 388
| ||||| |||||| |||||||| |||||||| || ||||| || | || ||||
Sbjct: 267 tccccaatgggtttaaaaagtttgttgtgcacaacgtgggggagcttgaagtcctgatga 326
Query: 389 tgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||| ||||| || ||||||||||| || || ||||||||
Sbjct: 327 tgcataacagaacttactgtgctgagattgcccacaacgt 366
>gb|DT500600.1|DT500600 PX0015.BR_P21 PT-X-FL-A-1 Populus trichocarpa cDNA clone PX0015_P21
5', mRNA sequence
Length = 535
Score = 127 bits (64), Expect = 6e-028
Identities = 226/280 (80%)
Strand = Plus / Plus
Query: 149 agaagatcgtgaagaagcgggtcaagcagttcaagaggccccacctcgaccgctacaagt 208
|||||||||||||||||||||||||| |||||||||||||||| |||||| | | |
Sbjct: 87 agaagatcgtgaagaagcgggtcaagaagttcaagaggccccaaagtgaccgcaagattt 146
Query: 209 gcctcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttca 268
||||| ||| |||| | |||||||||||||| || || | |||||| | |||||||
Sbjct: 147 ctgtcaagacaaactggaggaggcccaagggtattgattctagggtcaggagaaagttca 206
Query: 269 agggatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatc 328
| |||||||| |||||||| |||||||| |||||||| |||||||| || | |||||||
Sbjct: 207 aaggatgcactttgatgccaaacattggttatggctccgacaagaaaactcgtcactatc 266
Query: 329 ttcccaacaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttgcttatga 388
| ||||| |||||| |||||||| |||||||| || ||||| || | || ||||
Sbjct: 267 tccccaatgggtttaaaaagtttgttgtgcacaacgtgggggagcttgaagtcctgatga 326
Query: 389 tgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||| ||||| || ||||||||||| || || ||||||||
Sbjct: 327 tgcataacagaacttactgtgctgagattgcccacaacgt 366
>gb|CA926504.1|CA926504 MTU6CR.P15.G11 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 496
Score = 125 bits (63), Expect = 2e-027
Identities = 183/223 (82%)
Strand = Plus / Minus
Query: 140 tgttgactcagaagatcgtgaagaagcgggtcaagcagttcaagaggccccacctcgacc 199
||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 456 tgttgacgaagaagatcgtgaagaagcgggtcaagaagttcaagaggccccaaagtgacc 397
Query: 200 gctacaagtgcctcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggc 259
|| | | | ||||| ||| |||| | |||||||||||||| || || | ||||||
Sbjct: 396 gcaagatttctgtcaagacaaactggaggaggcccaagggtattgattcaagggtcagga 337
Query: 260 ggaagttcaagggatgcaccttgatgcctaacattggatatggctctgacaagaagacca 319
| |||||||| |||||||| |||||||| |||||||| |||||||| |||||||| ||
Sbjct: 336 gaaagttcaaaggatgcactttgatgccaaacattggttatggctccgacaagaaaactc 277
Query: 320 ggcactatcttcccaacaagtttaagaagtttgtcgtgcacaa 362
| |||||||| ||||| |||||| |||||||| ||||||||
Sbjct: 276 gtcactatctccccaatgggtttaaaaagtttgttgtgcacaa 234
>gb|CA926986.1|CA926986 MTU6CR.P3.E10 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 512
Score = 125 bits (63), Expect = 2e-027
Identities = 183/223 (82%)
Strand = Plus / Plus
Query: 140 tgttgactcagaagatcgtgaagaagcgggtcaagcagttcaagaggccccacctcgacc 199
||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 57 tgttgacgaagaagatcgtgaagaagcgggtcaagaagttcaagaggccccaaagtgacc 116
Query: 200 gctacaagtgcctcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggc 259
|| | | | ||||| ||| |||| | |||||||||||||| || || | ||||||
Sbjct: 117 gcaagatttctgtcaagacaaactggaggaggcccaagggtattgattcaagggtcagga 176
Query: 260 ggaagttcaagggatgcaccttgatgcctaacattggatatggctctgacaagaagacca 319
| |||||||| |||||||| |||||||| |||||||| |||||||| |||||||| ||
Sbjct: 177 gaaagttcaaaggatgcactttgatgccaaacattggttatggctccgacaagaaaactc 236
Query: 320 ggcactatcttcccaacaagtttaagaagtttgtcgtgcacaa 362
| |||||||| ||||| |||||| |||||||| ||||||||
Sbjct: 237 gtcactatctccccaatgggtttaaaaagtttgttgtgcacaa 279
>gb|AI161807.1|AI161807 A007P29U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 547
Score = 123 bits (62), Expect = 9e-027
Identities = 176/214 (82%)
Strand = Plus / Plus
Query: 149 agaagatcgtgaagaagcgggtcaagcagttcaagaggccccacctcgaccgctacaagt 208
|||||||||||||||||||||||||| |||||||||||||||| |||||| | | |
Sbjct: 57 agaagatcgtgaagaagcgggtcaagaagttcaagaggccccaaagtgaccgcaagattt 116
Query: 209 gcctcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttca 268
||||| ||| |||| | |||||||||||||| || || | |||||| | |||||||
Sbjct: 117 ctgtcaagacaaactggaggaggcccaagggtattgattcaagggtcaggagaaagttca 176
Query: 269 agggatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatc 328
| |||||||| |||||||| |||||||| |||||||| |||||||| || | |||||||
Sbjct: 177 aaggatgcactttgatgccaaacattggttatggctccgacaagaaaactcgtcactatc 236
Query: 329 ttcccaacaagtttaagaagtttgtcgtgcacaa 362
| ||||| |||||| |||||||| ||||||||
Sbjct: 237 tccccaatgggtttaaaaagtttgttgtgcacaa 270
>gb|BU827421.1|BU827421 K001P96P Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 567
Score = 123 bits (62), Expect = 9e-027
Identities = 176/214 (82%)
Strand = Plus / Plus
Query: 149 agaagatcgtgaagaagcgggtcaagcagttcaagaggccccacctcgaccgctacaagt 208
|||||||||||||||||||||||||| |||||||||||||||| |||||| | | |
Sbjct: 31 agaagatcgtgaagaagcgggtcaagaagttcaagaggccccaaagtgaccgcaagattt 90
Query: 209 gcctcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttca 268
||||| ||| |||| | |||||||||||||| || || | |||||| | |||||||
Sbjct: 91 ctgtcaagacaaactggaggaggcccaagggtattgattcaagggtcaggagaaagttca 150
Query: 269 agggatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatc 328
| |||||||| |||||||| |||||||| |||||||| |||||||| || | |||||||
Sbjct: 151 aaggatgcactttgatgccaaacattggttatggctccgacaagaaaactcgtcactatc 210
Query: 329 ttcccaacaagtttaagaagtttgtcgtgcacaa 362
| ||||| |||||| |||||||| ||||||||
Sbjct: 211 tccccaatgggtttaaaaagtttgttgtgcacaa 244
>gb|BU830155.1|BU830155 T004F03 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 418
Score = 123 bits (62), Expect = 9e-027
Identities = 176/214 (82%)
Strand = Plus / Plus
Query: 149 agaagatcgtgaagaagcgggtcaagcagttcaagaggccccacctcgaccgctacaagt 208
|||||||||||||||||||||||||| |||||||||||||||| |||||| | | |
Sbjct: 72 agaagatcgtgaagaagcgggtcaagaagttcaagaggccccaaagtgaccgcaagattt 131
Query: 209 gcctcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttca 268
||||| ||| |||| | |||||||||||||| || || | |||||| | |||||||
Sbjct: 132 ctgtcaagacaaactggaggaggcccaagggtattgattcaagggtcaggagaaagttca 191
Query: 269 agggatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatc 328
| |||||||| |||||||| |||||||| |||||||| |||||||| || | |||||||
Sbjct: 192 aaggatgcactttgatgccaaacattggttatggctccgacaagaaaactcgtcactatc 251
Query: 329 ttcccaacaagtttaagaagtttgtcgtgcacaa 362
| ||||| |||||| |||||||| ||||||||
Sbjct: 252 tccccaatgggtttaaaaagtttgttgtgcacaa 285
>gb|BU833249.1|BU833249 T044B09 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 581
Score = 123 bits (62), Expect = 9e-027
Identities = 176/214 (82%)
Strand = Plus / Plus
Query: 149 agaagatcgtgaagaagcgggtcaagcagttcaagaggccccacctcgaccgctacaagt 208
|||||||||||||||||||||||||| |||||||||||||||| |||||| | | |
Sbjct: 88 agaagatcgtgaagaagcgggtcaagaagttcaagaggccccaaagtgaccgcaagattt 147
Query: 209 gcctcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttca 268
||||| ||| |||| | |||||||||||||| || || | |||||| | |||||||
Sbjct: 148 ctgtcaagacaaactggaggaggcccaagggtattgattcaagggtcaggagaaagttca 207
Query: 269 agggatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatc 328
| |||||||| |||||||| |||||||| |||||||| |||||||| || | |||||||
Sbjct: 208 aaggatgcactttgatgccaaacattggttatggctccgacaagaaaactcgtcactatc 267
Query: 329 ttcccaacaagtttaagaagtttgtcgtgcacaa 362
| ||||| |||||| |||||||| ||||||||
Sbjct: 268 tccccaatgggtttaaaaagtttgttgtgcacaa 301
>gb|CK098893.1|CK098893 A041P32.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A041P32 5', mRNA sequence
Length = 496
Score = 123 bits (62), Expect = 9e-027
Identities = 176/214 (82%)
Strand = Plus / Plus
Query: 149 agaagatcgtgaagaagcgggtcaagcagttcaagaggccccacctcgaccgctacaagt 208
|||||||||||||||||||||||||| |||||||||||||||| |||||| | | |
Sbjct: 49 agaagatcgtgaagaagcgggtcaagaagttcaagaggccccaaagtgaccgcaagattt 108
Query: 209 gcctcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttca 268
||||| ||| |||| | |||||||||||||| || || | |||||| | |||||||
Sbjct: 109 ctgtcaagacaaactggaggaggcccaagggtattgattcaagggtcaggagaaagttca 168
Query: 269 agggatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatc 328
| |||||||| |||||||| |||||||| |||||||| |||||||| || | |||||||
Sbjct: 169 aaggatgcactttgatgccaaacattggttatggctccgacaagaaaactcgtcactatc 228
Query: 329 ttcccaacaagtttaagaagtttgtcgtgcacaa 362
| ||||| |||||| |||||||| ||||||||
Sbjct: 229 tccccaatgggtttaaaaagtttgttgtgcacaa 262
>gb|CV251614.1|CV251614 WS0117.B21_L05 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS0117_L05 3', mRNA sequence
Length = 415
Score = 123 bits (62), Expect = 9e-027
Identities = 176/214 (82%)
Strand = Plus / Minus
Query: 149 agaagatcgtgaagaagcgggtcaagcagttcaagaggccccacctcgaccgctacaagt 208
|||||||||||||||||||||||||| |||||||||||||||| |||||| | | |
Sbjct: 336 agaagatcgtgaagaagcgggtcaagaagttcaagaggccccaaagtgaccgcaagattt 277
Query: 209 gcctcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttca 268
||||| ||| |||| | |||||||||||||| || || | |||||| | |||||||
Sbjct: 276 ctgtcaagacaaactggaggaggcccaagggtattgattctagggtcaggagaaagttca 217
Query: 269 agggatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatc 328
| |||||||| |||||||| |||||||| |||||||| |||||||| || | |||||||
Sbjct: 216 aaggatgcactttgatgccaaacattggttatggctccgacaagaaaactcgtcactatc 157
Query: 329 ttcccaacaagtttaagaagtttgtcgtgcacaa 362
| ||||| |||||| |||||||| ||||||||
Sbjct: 156 tccccaatgggtttaaaaagtttgttgtgcacaa 123
>gb|CV253282.1|CV253282 WS0221.B21_H08 PTxD-ICC-A-12 Populus trichocarpa x Populus
deltoides cDNA clone WS0221_H08 3', mRNA sequence
Length = 722
Score = 123 bits (62), Expect = 9e-027
Identities = 176/214 (82%)
Strand = Plus / Plus
Query: 149 agaagatcgtgaagaagcgggtcaagcagttcaagaggccccacctcgaccgctacaagt 208
|||||||||||||||||||||||||| |||||||||||||||| |||||| | | |
Sbjct: 475 agaagatcgtgaagaagcgggtcaagaagttcaagaggccccaaagtgaccgcaagattt 534
Query: 209 gcctcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttca 268
||||| ||| |||| | |||||||||||||| || || | |||||| | |||||||
Sbjct: 535 ctgtcaagacaaactggaggaggcccaagggtattgattctagggtcaggagaaagttca 594
Query: 269 agggatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatc 328
| |||||||| |||||||| |||||||| |||||||| |||||||| || | |||||||
Sbjct: 595 aaggatgcactttgatgccaaacattggttatggctccgacaagaaaactcgtcactatc 654
Query: 329 ttcccaacaagtttaagaagtttgtcgtgcacaa 362
| ||||| |||||| |||||||| ||||||||
Sbjct: 655 tccccaatgggtttaaaaagtttgttgtgcacaa 688
>gb|CA825906.1|CA825906 R69E04 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 602
Score = 121 bits (61), Expect = 4e-026
Identities = 250/313 (79%)
Strand = Plus / Plus
Query: 212 tcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttcaagg 271
||||| ||| ||||||||| || || ||||| || || |||||| | | ||||||||||
Sbjct: 115 tcaagacaaactggcgcagaccgaaaggtattgattctcgtgtccgaagaaagttcaagg 174
Query: 272 gatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatcttc 331
||||||| | ||||| |||||||| ||||| |||||||||||| | | || |||||||
Sbjct: 175 gatgcactctaatgcccaacattggctatggttctgacaagaaggctcgtcattatcttc 234
Query: 332 ccaacaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttgcttatgatgc 391
| ||| || ||||| ||||| || |||||||| ||||| || | || |||||||
Sbjct: 235 caaacggtttcaagaaatttgttgtccacaatgtcaaggagcttgaagtactgatgatgc 294
Query: 392 acaacaggacatactgtgctgaaatcgcacacaacgtgtccactaagaagcgcaaggaaa 451
|||||||||| ||||| ||||| || ||||| || ||||| || | |||| | || || |
Sbjct: 295 acaacaggacttactgcgctgagatagcacataatgtgtcaacaaggaagagaaaagaga 354
Query: 452 tcgtggagcgagctgctcagcttgacattgtggtcaccaataagcttgcccgtctccgca 511
|||||||||||||||||||||||||| |||| || || || ||||||||| | | ||||
Sbjct: 355 tcgtggagcgagctgctcagcttgacgttgttgttacgaacaagcttgccaggttgcgca 414
Query: 512 gccaggaagatga 524
||||||| |||||
Sbjct: 415 gccaggaggatga 427
>gb|CF228162.1|CF228162 PtaXM0009F5F0511 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 582
Score = 121 bits (61), Expect = 4e-026
Identities = 250/313 (79%)
Strand = Plus / Plus
Query: 212 tcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttcaagg 271
||||| ||| |||||| || || || |||||||| || |||||| | | ||||||||||
Sbjct: 124 tcaagacaaactggcgtagaccgaaaggtatcgattctcgtgtccgaagaaagttcaagg 183
Query: 272 gatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatcttc 331
|||| || | ||||| |||||||| ||||| |||||||||||||| | || |||||||
Sbjct: 184 gatgtactctaatgcccaacattggctatggttctgacaagaagactcgtcattatcttc 243
Query: 332 ccaacaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttgcttatgatgc 391
| ||| || ||||| ||||| || |||||||| ||||| || | || |||||||
Sbjct: 244 caaacggtttcaagaaatttgttgtccacaatgtcaaggagcttgaagtactgatgatgc 303
Query: 392 acaacaggacatactgtgctgaaatcgcacacaacgtgtccactaagaagcgcaaggaaa 451
|||||||||| ||||| ||||| || ||||| || ||||| || | |||| | || || |
Sbjct: 304 acaacaggacttactgcgctgagatagcacataatgtgtcaacgaggaagagaaaagaga 363
Query: 452 tcgtggagcgagctgctcagcttgacattgtggtcaccaataagcttgcccgtctccgca 511
|||||||||||||||||||||||||| |||| || || || ||||||||| | | ||||
Sbjct: 364 tcgtggagcgagctgctcagcttgacgttgttgtgacgaacaagcttgccaggttgcgca 423
Query: 512 gccaggaagatga 524
||||||| |||||
Sbjct: 424 gccaggaggatga 436
>gb|CF231105.1|CF231105 PtaC0017D3D0307 Poplar cDNA library from cambial zone Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 591
Score = 119 bits (60), Expect = 1e-025
Identities = 195/240 (81%)
Strand = Plus / Plus
Query: 262 aagttcaagggatgcaccttgatgcctaacattggatatggctctgacaagaagaccagg 321
|||||||||||||| || | ||||| |||||||| ||||| |||||||||||||| |
Sbjct: 180 aagttcaagggatgtactctaatgcccaacattggctatggttctgacaagaagactcgt 239
Query: 322 cactatcttcccaacaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttg 381
|| |||||||| ||| || ||||| |||||||| |||||||| ||||| || |
Sbjct: 240 cattatcttccaaacggtttcaagaaatttgtcgtccacaatgtcaaggagcttgaagta 299
Query: 382 cttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgtgtccactaagaag 441
|| ||||||||||||||||| ||||| ||||| || ||||| || ||||| || | ||||
Sbjct: 300 ctgatgatgcacaacaggacttactgcgctgagatagcacataatgtgtcaacaaggaag 359
Query: 442 cgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcaccaataagcttgcc 501
| || || ||||||||||||||||||||||||||| |||| || || || |||||||||
Sbjct: 360 agaaaagagatcgtggagcgagctgctcagcttgacgttgttgttacgaacaagcttgcc 419
>gb|CV250615.1|CV250615 WS0114.B21_C23 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS0114_C23 3', mRNA sequence
Length = 656
Score = 119 bits (60), Expect = 1e-025
Identities = 225/280 (80%)
Strand = Plus / Minus
Query: 149 agaagatcgtgaagaagcgggtcaagcagttcaagaggccccacctcgaccgctacaagt 208
|||||||||||||||||||||||||| |||||||||||||||| |||||| | | |
Sbjct: 597 agaagatcgtgaagaagcgggtcaagaagttcaagaggccccaaagtgaccgcaagattt 538
Query: 209 gcctcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttca 268
||||| ||| |||| | |||||||||||| | || || | |||||| | |||||||
Sbjct: 537 ctgtcaagacaaactggaggaggcccaagggtgttgattctagggtcaggagaaagttca 478
Query: 269 agggatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatc 328
| |||||||| |||||||| |||||||| |||||||| |||||||| || | |||||||
Sbjct: 477 aaggatgcactttgatgccaaacattggttatggctccgacaagaaaactcgtcactatc 418
Query: 329 ttcccaacaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttgcttatga 388
| ||||| |||||| |||||||| |||||||| || ||||| || | || ||||
Sbjct: 417 tccccaatgggtttaaaaagtttgttgtgcacaacgtgggggagcttgaagtcctgatga 358
Query: 389 tgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||| ||||| || ||||||||||| || || ||||||||
Sbjct: 357 tgcataacagaacttactgtgctgagattgcccacaacgt 318
>gb|DT498031.1|DT498031 WS0114.BR_C23 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0114_C23
5', mRNA sequence
Length = 680
Score = 119 bits (60), Expect = 1e-025
Identities = 225/280 (80%)
Strand = Plus / Plus
Query: 149 agaagatcgtgaagaagcgggtcaagcagttcaagaggccccacctcgaccgctacaagt 208
|||||||||||||||||||||||||| |||||||||||||||| |||||| | | |
Sbjct: 87 agaagatcgtgaagaagcgggtcaagaagttcaagaggccccaaagtgaccgcaagattt 146
Query: 209 gcctcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttca 268
||||| ||| |||| | |||||||||||| | || || | |||||| | |||||||
Sbjct: 147 ctgtcaagacaaactggaggaggcccaagggtgttgattctagggtcaggagaaagttca 206
Query: 269 agggatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatc 328
| |||||||| |||||||| |||||||| |||||||| |||||||| || | |||||||
Sbjct: 207 aaggatgcactttgatgccaaacattggttatggctccgacaagaaaactcgtcactatc 266
Query: 329 ttcccaacaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttgcttatga 388
| ||||| |||||| |||||||| |||||||| || ||||| || | || ||||
Sbjct: 267 tccccaatgggtttaaaaagtttgttgtgcacaacgtgggggagcttgaagtcctgatga 326
Query: 389 tgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||| ||||| || ||||||||||| || || ||||||||
Sbjct: 327 tgcataacagaacttactgtgctgagattgcccacaacgt 366
>gb|CA926827.1|CA926827 MTU6CR.P1.F04 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 506
Score = 117 bits (59), Expect = 6e-025
Identities = 182/223 (81%)
Strand = Plus / Plus
Query: 140 tgttgactcagaagatcgtgaagaagcgggtcaagcagttcaagaggccccacctcgacc 199
||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 51 tgttgacgaagaagatcgtgaagaagcgggtcaagaagttcaagaggccccaaagtgacc 110
Query: 200 gctacaagtgcctcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggc 259
|| | | | ||||| ||| |||| | |||||||||||||| || || ||||||
Sbjct: 111 gcaagatttctgtcaagacaaactggaggaggcccaagggtattgattcaatggtcagga 170
Query: 260 ggaagttcaagggatgcaccttgatgcctaacattggatatggctctgacaagaagacca 319
| |||||||| |||||||| |||||||| |||||||| |||||||| |||||||| ||
Sbjct: 171 gaaagttcaaaggatgcactttgatgccaaacattggttatggctccgacaagaaaactc 230
Query: 320 ggcactatcttcccaacaagtttaagaagtttgtcgtgcacaa 362
| |||||||| ||||| |||||| |||||||| ||||||||
Sbjct: 231 gtcactatctccccaatgggtttaaaaagtttgttgtgcacaa 273
>gb|CK116797.1|CK116797 B017P75 Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone B017P75 5', mRNA sequence
Length = 362
Score = 117 bits (59), Expect = 6e-025
Identities = 175/214 (81%)
Strand = Plus / Plus
Query: 149 agaagatcgtgaagaagcgggtcaagcagttcaagaggccccacctcgaccgctacaagt 208
|||||||||||||||||||||||||| |||||||||||||||| |||||| | | |
Sbjct: 37 agaagatcgtgaagaagcgggtcaagaagttcaagaggccccaaagtgaccgcaagattt 96
Query: 209 gcctcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttca 268
||||| ||| |||| | |||||||||||||| || || | |||||| | |||||||
Sbjct: 97 ctgtcaagacaaactggaggaggcccaagggtattgattcaagggtcaggagaaagttca 156
Query: 269 agggatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatc 328
| |||||||| |||||||| |||||||| |||||||| |||| ||| || | |||||||
Sbjct: 157 aaggatgcactttgatgccaaacattggttatggctccgacangaaaactcgtcactatc 216
Query: 329 ttcccaacaagtttaagaagtttgtcgtgcacaa 362
| ||||| |||||| |||||||| ||||||||
Sbjct: 217 tccccaatgggtttaaaaagtttgttgtgcacaa 250
>gb|CX655168.1|CX655168 PO02030H05 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02030H05 5', mRNA sequence
Length = 577
Score = 117 bits (59), Expect = 6e-025
Identities = 212/263 (80%)
Strand = Plus / Plus
Query: 262 aagttcaagggatgcaccttgatgcctaacattggatatggctctgacaagaagaccagg 321
|||||||||||||| || | ||||| |||||||| ||||| |||||||||||||| |
Sbjct: 41 aagttcaagggatgtactctaatgcccaacattggctatggttctgacaagaagactcgt 100
Query: 322 cactatcttcccaacaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttg 381
|| |||||||| ||| || ||||| |||||||| |||||||| ||||| || |
Sbjct: 101 cattatcttccaaacggtttcaagaaatttgtcgtccacaatgtcaaggagcttgaagta 160
Query: 382 cttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgtgtccactaagaag 441
|| ||||||||||||||||| |||| ||||| || ||||| || ||||| || | ||||
Sbjct: 161 ctgatgatgcacaacaggactcactgcgctgagatagcacataatgtgtcaacaaggaag 220
Query: 442 cgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcaccaataagcttgcc 501
| || || ||||||||||||||||||||||||||| |||| || || || |||||||||
Sbjct: 221 agaaaagagatcgtggagcgagctgctcagcttgacgttgttgttacgaacaagcttgcc 280
Query: 502 cgtctccgcagccaggaagatga 524
| | ||||||||||| |||||
Sbjct: 281 aggttgcgcagccaggaggatga 303
>gb|BU817037.1|BU817037 UA12BPC08 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 411
Score = 115 bits (58), Expect = 2e-024
Identities = 175/214 (81%)
Strand = Plus / Plus
Query: 149 agaagatcgtgaagaagcgggtcaagcagttcaagaggccccacctcgaccgctacaagt 208
|||||||||||||||||||||||||| |||||||||||||||| |||||| | | |
Sbjct: 83 agaagatcgtgaagaagcgggtcaagaagttcaagaggccccaaagtgaccgcaagattt 142
Query: 209 gcctcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttca 268
||||| ||| |||| | |||||||||||||| || || | |||||| | |||||||
Sbjct: 143 ctgtcaagacaaactggaggaggcccaagggtattgattcaagggtcaggagaaagttca 202
Query: 269 agggatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatc 328
| ||||| || |||||||| |||||||| |||||||| |||||||| || | |||||||
Sbjct: 203 aaggatgtactttgatgccaaacattggttatggctccgacaagaaaactcgtcactatc 262
Query: 329 ttcccaacaagtttaagaagtttgtcgtgcacaa 362
| ||||| |||||| |||||||| ||||||||
Sbjct: 263 tccccaatgggtttaaaaagtttgttgtgcacaa 296
>gb|BU831446.1|BU831446 T021F02 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 688
Score = 115 bits (58), Expect = 2e-024
Identities = 175/214 (81%)
Strand = Plus / Plus
Query: 149 agaagatcgtgaagaagcgggtcaagcagttcaagaggccccacctcgaccgctacaagt 208
|||||||||||||||||||||||||| |||||||||||||||| |||||| | | |
Sbjct: 45 agaagatcgtgaagaagcgggtcaagaagttcaagaggccccaaagtgaccgcaagattt 104
Query: 209 gcctcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttca 268
||||| ||| |||| | |||||||||||||| || || | |||||| | |||||||
Sbjct: 105 ctgtcaagacaaactggaggaggcccaagggtattgattcaagggtcaggagaaagttca 164
Query: 269 agggatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatc 328
| |||||||| |||||||| |||||||| |||||||| |||||||| || | |||||||
Sbjct: 165 aaggatgcactttgatgccaaacattggttatggctccgacaagaaaactcgtcactatc 224
Query: 329 ttcccaacaagtttaagaagtttgtcgtgcacaa 362
| ||||| ||||| |||||||| ||||||||
Sbjct: 225 tccccaatggatttaaaaagtttgttgtgcacaa 258
>gb|BU873488.1|BU873488 Q056B02 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 570
Score = 115 bits (58), Expect = 2e-024
Identities = 175/214 (81%)
Strand = Plus / Plus
Query: 149 agaagatcgtgaagaagcgggtcaagcagttcaagaggccccacctcgaccgctacaagt 208
|||||||||||||||||||||||||| |||||||||||||||| |||||| | | |
Sbjct: 94 agaagatcgtgaagaagcgggtcaagaagttcaagaggccccaaagtgaccgcaagattt 153
Query: 209 gcctcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttca 268
||||| ||| |||| | |||||||||||||| || || | |||||| | |||||||
Sbjct: 154 ctgtcaagacaaactggaggaggcccaagggtattgattcaagggtcaggagaaagttca 213
Query: 269 agggatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatc 328
| |||||||| |||||||| |||||||| |||||||| |||||||| || | |||||||
Sbjct: 214 aaggatgcactttgatgccaaacattggttatggctccgacaagaaaactcgtcactatc 273
Query: 329 ttcccaacaagtttaagaagtttgtcgtgcacaa 362
| ||||| ||||| |||||||| ||||||||
Sbjct: 274 tccccaatggatttaaaaagtttgttgtgcacaa 307
>gb|BU873536.1|BU873536 Q056F04 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 653
Score = 115 bits (58), Expect = 2e-024
Identities = 175/214 (81%)
Strand = Plus / Plus
Query: 149 agaagatcgtgaagaagcgggtcaagcagttcaagaggccccacctcgaccgctacaagt 208
|||||||||||||||||||||||||| |||||||||||||||| |||||| | | |
Sbjct: 307 agaagatcgtgaagaagcgggtcaagaagttcaagaggccccaaagtgaccgcaagattt 366
Query: 209 gcctcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttca 268
||||| ||| |||| | |||||||||||||| || || | |||||| | |||||||
Sbjct: 367 ctgtcaagacaaactggaggaggcccaagggtattgattcaagggtcaggagaaagttca 426
Query: 269 agggatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatc 328
| |||||||| |||||||| |||||||| |||||||| |||||||| || | |||||||
Sbjct: 427 aaggatgcactttgatgccaaacattggttatggctccgacaagaaaactcgtcactatc 486
Query: 329 ttcccaacaagtttaagaagtttgtcgtgcacaa 362
| ||||| ||||| |||||||| ||||||||
Sbjct: 487 tccccaatggatttaaaaagtttgttgtgcacaa 520
>gb|BU874553.1|BU874553 Q069C12 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 425
Score = 115 bits (58), Expect = 2e-024
Identities = 175/214 (81%)
Strand = Plus / Plus
Query: 149 agaagatcgtgaagaagcgggtcaagcagttcaagaggccccacctcgaccgctacaagt 208
|||||||||||||||||||||||||| |||||||||||||||| |||||| | | |
Sbjct: 79 agaagatcgtgaagaagcgggtcaagaagttcaagaggccccaaagtgaccgcaagattt 138
Query: 209 gcctcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttca 268
||||| ||| |||| | |||||||||||||| || || | |||||| | |||||||
Sbjct: 139 ctgtcaagacaaactggaggaggcccaagggtattgattcaagggtcaggagaaagttca 198
Query: 269 agggatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatc 328
| |||||||| |||||||| |||||||| |||||||| |||||||| || | |||||||
Sbjct: 199 aaggatgcactttgatgccaaacattggttatggctccgacaagaaaactcgtcactatc 258
Query: 329 ttcccaacaagtttaagaagtttgtcgtgcacaa 362
| ||||| ||||| |||||||| ||||||||
Sbjct: 259 tccccaatggatttaaaaagtttgttgtgcacaa 292
>gb|AJ778425.1|AJ778425 AJ778425 Populus euphratica cambium 3-6 months Populus euphratica
cDNA clone P0000500004D01F1, mRNA sequence
Length = 573
Score = 113 bits (57), Expect = 9e-024
Identities = 249/313 (79%)
Strand = Plus / Plus
Query: 212 tcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttcaagg 271
||||| ||| |||||| || || || ||||| || || |||||| | || ||||||||||
Sbjct: 111 tcaagacaaactggcgtagaccgaaaggtattgattctcgtgtccgacgaaagttcaagg 170
Query: 272 gatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatcttc 331
|||| || | ||||| |||||||| ||||| |||||||||||||| | || |||||||
Sbjct: 171 gatgtactctaatgcccaacattggttatggttctgacaagaagactcgtcattatcttc 230
Query: 332 ccaacaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttgcttatgatgc 391
| ||| || ||||| ||||| || || ||||| ||||| || | || |||||||
Sbjct: 231 caaacggtttcaagaaatttgttgtccataatgtcaaggagcttgaagtactgatgatgc 290
Query: 392 acaacaggacatactgtgctgaaatcgcacacaacgtgtccactaagaagcgcaaggaaa 451
|||||||||| | ||| ||||| || |||||||| ||||| || | |||| | || || |
Sbjct: 291 acaacaggacttgctgcgctgagatagcacacaatgtgtcaacaaggaagagaaaagaga 350
Query: 452 tcgtggagcgagctgctcagcttgacattgtggtcaccaataagcttgcccgtctccgca 511
|||||||||||||||||||||||||| |||| || || || ||||||||| | | ||||
Sbjct: 351 tcgtggagcgagctgctcagcttgacgttgttgttacgaacaagcttgccaggttgcgca 410
Query: 512 gccaggaagatga 524
||||||| |||||
Sbjct: 411 gccaggaggatga 423
>gb|CX653923.1|CX653923 PO02009E01 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02009E01 5', mRNA sequence
Length = 582
Score = 113 bits (57), Expect = 9e-024
Identities = 249/313 (79%)
Strand = Plus / Minus
Query: 212 tcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttcaagg 271
||||| ||| |||||| || || |||||||| || || |||||| | | ||||||||||
Sbjct: 479 tcaagacaaactggcgtagaccgaagggtattgattctcgtgtccgaagaaagttcaagg 420
Query: 272 gatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatcttc 331
|||| || | ||||| |||||||| ||||| |||||||||||||| | || | |||||
Sbjct: 419 gatgtactctaatgcccaacattggctatggttctgacaagaagactcgacattttcttc 360
Query: 332 ccaacaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttgcttatgatgc 391
||||| || ||||| ||||| || |||||||| ||||| || | || |||||||
Sbjct: 359 ccaacggtttcaagaaatttgttgtccacaatgtcaaggagcttgaagtactgatgatgc 300
Query: 392 acaacaggacatactgtgctgaaatcgcacacaacgtgtccactaagaagcgcaaggaaa 451
|||||||||| ||||| ||||| || ||||| || ||||| || | |||| | || || |
Sbjct: 299 acaacaggacttactgcgctgagatagcacataatgtgtcaacaaggaagagaaaagaga 240
Query: 452 tcgtggagcgagctgctcagcttgacattgtggtcaccaataagcttgcccgtctccgca 511
| |||||||||||||||||||||||| |||| || || || ||||||||| | | ||||
Sbjct: 239 tagtggagcgagctgctcagcttgacgttgttgttacgaacaagcttgccaggttgcgca 180
Query: 512 gccaggaagatga 524
||||||| |||||
Sbjct: 179 gccaggaggatga 167
>gb|CV251835.1|CV251835 WS0118.B21_E16 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS0118_E16 3', mRNA sequence
Length = 599
Score = 111 bits (56), Expect = 4e-023
Identities = 224/280 (80%)
Strand = Plus / Minus
Query: 149 agaagatcgtgaagaagcgggtcaagcagttcaagaggccccacctcgaccgctacaagt 208
|||||||||||||||||||||||| |||||||||||||||| |||||| | | |
Sbjct: 585 agaagatcgtgaagaagcgggtcagaaagttcaagaggccccaaagtgaccgcaagattt 526
Query: 209 gcctcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttca 268
||||| ||| |||| | |||||||||||||| || || | |||||| | |||||||
Sbjct: 525 ctgtcaagacaaactggaggaggcccaagggtattgattctagggtcaggagaaagttca 466
Query: 269 agggatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatc 328
| |||||||| |||||||| |||||||| |||||||| |||||||| || | |||||||
Sbjct: 465 aaggatgcactttgatgccaaacattggttatggctccgacaagaaaactcgtcactatc 406
Query: 329 ttcccaacaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttgcttatga 388
| ||||| |||||| |||||||| |||||||| || ||||| || | || ||||
Sbjct: 405 tccccaatgggtttaaaaagtttgttgtgcacaacgtgggggagcttgaagtcctgatga 346
Query: 389 tgcacaacaggacatactgtgctgaaatcgcacacaacgt 428
|||| ||||| || ||||||||||| || || ||||||||
Sbjct: 345 tgcataacagaacttactgtgctgagattgcccacaacgt 306
>gb|BU886211.1|BU886211 R042B09 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 621
Score = 109 bits (55), Expect = 1e-022
Identities = 211/263 (80%)
Strand = Plus / Plus
Query: 262 aagttcaagggatgcaccttgatgcctaacattggatatggctctgacaagaagaccagg 321
|||||||||||||| || | ||||| |||||||| ||||| |||||||||||||| |
Sbjct: 149 aagttcaagggatgtactctaatgcccaacattggctatggttctgacaagaagactcgt 208
Query: 322 cactatcttcccaacaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttg 381
|| | |||||| ||| || ||||| ||||| || |||||||| ||||| || |
Sbjct: 209 cattttcttccaaacggtttcaagaaatttgttgtccacaatgtcaaggagcttgaagta 268
Query: 382 cttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgtgtccactaagaag 441
|| |||||||| |||||||| ||||| ||||| || ||||| || ||||| || | ||||
Sbjct: 269 ctgatgatgcataacaggacttactgcgctgagatagcacataatgtgtcaacaaggaag 328
Query: 442 cgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcaccaataagcttgcc 501
| || |||||||||||||||||||||||||||||| |||| || || || |||||||||
Sbjct: 329 agaaaagaaatcgtggagcgagctgctcagcttgacgttgttgttacgaacaagcttgcc 388
Query: 502 cgtctccgcagccaggaagatga 524
| | ||||||||||| |||||
Sbjct: 389 tggttgcgcagccaggaggatga 411
>gb|CF231585.1|CF231585 PtaC0023C12C1206 Poplar cDNA library from cambial zone Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 738
Score = 109 bits (55), Expect = 1e-022
Identities = 174/214 (81%)
Strand = Plus / Plus
Query: 149 agaagatcgtgaagaagcgggtcaagcagttcaagaggccccacctcgaccgctacaagt 208
|||||||||||||||||||||||||| |||||||||||||||| |||||| | | |
Sbjct: 88 agaagatcgtgaagaagcgggtcaagaagttcaagaggccccaaagtgaccgcaagattt 147
Query: 209 gcctcaagccaagctggcgcaggcccaagggtatcgactcccgtgtcaggcggaagttca 268
||||| ||| |||| | |||||||||||||| || || | |||||| |||||||
Sbjct: 148 ctgtcaagacaaactggaggaggcccaagggtattgattcaagggtcagganaaagttca 207
Query: 269 agggatgcaccttgatgcctaacattggatatggctctgacaagaagaccaggcactatc 328
| |||||||| |||||||| |||||||| |||||||| |||||||| || | |||||||
Sbjct: 208 aaggatgcactttgatgccaaacattggttatggctccgacaagaaaactcgtcactatc 267
Query: 329 ttcccaacaagtttaagaagtttgtcgtgcacaa 362
| ||||| ||||| |||||||| ||||||||
Sbjct: 268 tccccaatggatttaaaaagtttgttgtgcacaa 301
>gb|CK088469.1|CK088469 A054P39.3pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A054P39 3', mRNA sequence
Length = 654
Score = 109 bits (55), Expect = 1e-022
Identities = 211/263 (80%)
Strand = Plus / Minus
Query: 262 aagttcaagggatgcaccttgatgcctaacattggatatggctctgacaagaagaccagg 321
|||||||||||||| || | ||||| |||||||| ||||| |||||||||||||| |
Sbjct: 492 aagttcaagggatgtactctaatgcccaacattggctatggttctgacaagaagactcgt 433
Query: 322 cactatcttcccaacaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttg 381
|| | |||||| ||| || ||||| ||||| || |||||||| ||||| || |
Sbjct: 432 cattttcttccaaacggtttcaagaaatttgttgtccacaatgtcaaggagcttgaagta 373
Query: 382 cttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgtgtccactaagaag 441
|| |||||||| |||||||| ||||| ||||| || ||||| || ||||| || | ||||
Sbjct: 372 ctgatgatgcataacaggacttactgcgctgagatagcacataatgtgtcaacaaggaag 313
Query: 442 cgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcaccaataagcttgcc 501
| || |||||||||||||||||||||||||||||| |||| || || || |||||||||
Sbjct: 312 agaaaagaaatcgtggagcgagctgctcagcttgacgttgttgttacgaacaagcttgcc 253
Query: 502 cgtctccgcagccaggaagatga 524
| | ||||||||||| |||||
Sbjct: 252 aggttgcgcagccaggaggatga 230
>gb|CK099156.1|CK099156 A054P39.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A054P39 5', mRNA sequence
Length = 488
Score = 109 bits (55), Expect = 1e-022
Identities = 211/263 (80%)
Strand = Plus / Plus
Query: 262 aagttcaagggatgcaccttgatgcctaacattggatatggctctgacaagaagaccagg 321
|||||||||||||| || | ||||| |||||||| ||||| |||||||||||||| |
Sbjct: 174 aagttcaagggatgtactctaatgcccaacattggctatggttctgacaagaagactcgt 233
Query: 322 cactatcttcccaacaagtttaagaagtttgtcgtgcacaatgtttctgagctggagttg 381
|| | |||||| ||| || ||||| ||||| || |||||||| ||||| || |
Sbjct: 234 cattttcttccaaacggtttcaagaaatttgttgtccacaatgtcaaggagcttgaagta 293
Query: 382 cttatgatgcacaacaggacatactgtgctgaaatcgcacacaacgtgtccactaagaag 441
|| |||||||| |||||||| ||||| ||||| || ||||| || ||||| || | ||||
Sbjct: 294 ctgatgatgcataacaggacttactgcgctgagatagcacataatgtgtcaacaaggaag 353
Query: 442 cgcaaggaaatcgtggagcgagctgctcagcttgacattgtggtcaccaataagcttgcc 501
| || |||||||||||||||||||||||||||||| |||| || || || |||||||||
Sbjct: 354 agaaaagaaatcgtggagcgagctgctcagcttgacgttgttgttacgaacaagcttgcc 413
Query: 502 cgtctccgcagccaggaagatga 524
| | ||||||||||| |||||
Sbjct: 414 aggttgcgcagccaggaggatga 436
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 69,313
Number of Sequences: 369679
Number of extensions: 69313
Number of successful extensions: 20245
Number of sequences better than 0.5: 120
Number of HSP's better than 0.5 without gapping: 120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 19829
Number of HSP's gapped (non-prelim): 382
length of query: 688
length of database: 203,408,664
effective HSP length: 19
effective length of query: 669
effective length of database: 196,384,763
effective search space: 131381406447
effective search space used: 131381406447
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)