BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2441110.2.2
(1019 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA925824.1|CA925824 MTU7TL.P6.D02 Aspen leaf cDNA Librar... 216 1e-054
gb|CA926734.1|CA926734 MTU6CR.P18.E09 Aspen root cDNA Libra... 216 1e-054
gb|CV232090.1|CV232090 WS0196.B21_I09 PT-DX-N-A-10 Populus ... 216 1e-054
gb|CV251335.1|CV251335 WS0116.B21_K09 PT-P-FL-A-2 Populus t... 216 1e-054
gb|CX659690.1|CX659690 PO01033G12 Poplar SC cDNA library Po... 216 1e-054
gb|CV272415.1|CV272415 WS0157.B21_J15 PTxN-IB-A-6 Populus t... 214 5e-054
gb|CA931968.1|CA931968 MTU4TA.P25.C03 Aspen apex cDNA Libra... 208 3e-052
gb|CV256200.1|CV256200 WS0243.B21_D08 PTxD-ICC-N-A-14 Popul... 208 3e-052
gb|CV282722.1|CV282722 WS0185.B21_G19 PTxD-IL-N-A-9 Populus... 208 3e-052
gb|DT501261.1|DT501261 WS01312.BR_B22 PTxD-IL-FL-A-4 Populu... 208 3e-052
gb|DT504127.1|DT504127 WS01312.B21_B22 PTxD-IL-FL-A-4 Popul... 208 3e-052
gb|BU871834.1|BU871834 Q035A12 Populus flower cDNA library ... 202 2e-050
gb|CF230981.1|CF230981 PtaC0015H5H0515 Poplar cDNA library ... 200 7e-050
gb|CX658954.1|CX658954 PO01024F01 Poplar SC cDNA library Po... 200 7e-050
gb|DT478590.1|DT478590 WS02523.BR_D13 PT-MB-N-A-15 Populus ... 200 7e-050
gb|DT481584.1|DT481584 WS02532.BR_E22 PT-MB-N-A-15 Populus ... 200 7e-050
gb|DT483661.1|DT483661 WS02523.B21_D13 PT-MB-N-A-15 Populus... 200 7e-050
gb|DT486924.1|DT486924 WS02532.B21_E22 PT-MB-N-A-15 Populus... 200 7e-050
gb|DT487567.1|DT487567 WS02534.B21_A18 PT-MB-N-A-15 Populus... 200 7e-050
gb|DT490083.1|DT490083 WS02543.B21_P20 PT-MB-N-A-15 Populus... 200 7e-050
gb|DT516435.1|DT516435 WS02431.B21_G04 PTxD-ICC-N-A-14 Popu... 200 7e-050
gb|BU827781.1|BU827781 K008P84P Populus apical shoot cDNA l... 198 3e-049
gb|CV232524.1|CV232524 WS0197.B21_N22 PT-DX-N-A-10 Populus ... 192 2e-047
gb|CV261857.1|CV261857 WS02017.B21_P11 PTxN-IB-N-A-11 Popul... 192 2e-047
gb|CA825610.1|CA825610 R62D03 two-month-old roots from clon... 190 7e-047
gb|DT498889.1|DT498889 WS0116.BR_K09 PT-P-FL-A-2 Populus tr... 188 3e-046
gb|CA821727.1|CA821727 RSH06F08 two-month-old roots from cl... 186 1e-045
gb|CF234133.1|CF234133 PtaJXO2H5H0515 Poplar cDNA library f... 180 7e-044
gb|CX656671.1|CX656671 PO02022A01 Poplar SC cDNA library Po... 172 2e-041
gb|CK318683.1|CK318683 X9P02c03 Populus stem seasonal libra... 168 3e-040
gb|CV245673.1|CV245673 WS0259.B21_B05 PT-MB-N-A-15 Populus ... 165 4e-039
gb|CX181170.1|CX181170 D11_45-56_07.ab1 leaf inoculated wit... 159 3e-037
gb|DT470274.1|DT470274 WS01920.C21_G04 PT-DX-N-A-10 Populus... 155 4e-036
gb|CF227796.1|CF227796 PtaXM0004G2G0214 Poplar cDNA library... 149 2e-034
gb|DT492529.1|DT492529 WS02551.C21_A09 PT-MB-N-A-15 Populus... 147 1e-033
gb|DN492590.1|DN492590 X027F04.3pR Populus wood cDNA librar... 145 4e-033
gb|DN503693.1|DN503693 X018G08.3pR Populus wood cDNA librar... 145 4e-033
gb|BU825782.1|BU825782 UK113TA07 Populus apical shoot cDNA ... 139 2e-031
gb|DN502617.1|DN502617 X027F02.5pR Populus wood cDNA librar... 139 2e-031
gb|DN503774.1|DN503774 X018G08.5pR Populus wood cDNA librar... 139 2e-031
gb|DT489899.1|DT489899 WS02543.B21_H21 PT-MB-N-A-15 Populus... 139 2e-031
gb|CF233198.1|CF233198 PtaJXO0020D9D0907 Poplar cDNA librar... 137 9e-031
gb|AI166600.1|AI166600 xylem.est.416 Poplar xylem Lambda ZA... 133 1e-029
gb|BU875363.1|BU875363 V006A07 Populus flower cDNA library ... 133 1e-029
gb|CX660414.1|CX660414 PO01013B08 Poplar SC cDNA library Po... 131 6e-029
gb|DT510062.1|DT510062 WS02425.BR_H18 PTxD-ICC-N-A-14 Popul... 131 6e-029
gb|DT514681.1|DT514681 WS02425.B21_H18 PTxD-ICC-N-A-14 Popu... 131 6e-029
gb|CX172129.1|CX172129 E01_69-71_09.ab1 leaf inoculated wit... 129 2e-028
gb|CX173825.1|CX173825 C03_69-85_05.ab1 leaf inoculated wit... 129 2e-028
gb|CA821848.1|CA821848 RSH08D07 two-month-old roots from cl... 127 9e-028
gb|CX183451.1|CX183451 D08_45-99_08.ab1 leaf inoculated wit... 127 9e-028
gb|CX184195.1|CX184195 A10_45-42_02.ab1 leaf inoculated wit... 127 9e-028
gb|CF233644.1|CF233644 PtaJXO0026A2A0202 Poplar cDNA librar... 123 1e-026
gb|AI164210.1|AI164210 A057P38U Hybrid aspen plasmid librar... 119 2e-025
gb|BI127215.1|BI127215 G057P02Y Populus cambium cDNA librar... 119 2e-025
gb|BU102295.1|BU102295 mep119 Poplar developing cambium Pop... 113 1e-023
gb|AJ775121.1|AJ775121 AJ775121 Populus euphratica shoot 3-... 113 1e-023
gb|AJ780821.1|AJ780821 AJ780821 Populus euphratica leaf 3-6... 113 1e-023
gb|CB240370.1|CB240370 PopSC00349 Poplar SC cDNA library Po... 111 5e-023
gb|CK107762.1|CK107762 G057P02 Populus tension wood cDNA li... 111 5e-023
gb|BU826918.1|BU826918 UK126TD02 Populus apical shoot cDNA ... 107 8e-022
gb|CK099221.1|CK099221 A057P38.5pR Hybrid aspen plasmid lib... 101 5e-020
gb|CA823108.1|CA823108 R21A02 two-month-old roots from clon... 96 3e-018
gb|BU892899.1|BU892899 P070H04 Populus petioles cDNA librar... 92 5e-017
gb|CX177637.1|CX177637 F03_45-64_11.ab1 leaf inoculated wit... 92 5e-017
gb|CX179121.1|CX179121 E11_45-108_09.ab1 leaf inoculated wi... 92 5e-017
gb|CF230904.1|CF230904 PtaC0014F5F0511 Poplar cDNA library ... 90 2e-016
gb|DN488508.1|DN488508 S003D06.3pR Populus imbibed seed cDN... 88 8e-016
gb|CF235117.1|CF235117 PtaJXT0019B11B1103 Poplar cDNA libra... 86 3e-015
gb|CF230905.1|CF230905 PtaC0014F6F0612 Poplar cDNA library ... 78 7e-013
gb|CX172487.1|CX172487 F03_69-95_11.ab1 leaf inoculated wit... 74 1e-011
gb|CF233202.1|CF233202 PtaJXO0020E1E0109 Poplar cDNA librar... 70 2e-010
gb|DT506018.1|DT506018 WS01812.C21_H16 PTxD-IL-N-A-9 Populu... 70 2e-010
gb|BI126257.1|BI126257 I072P71P Populus leaf cDNA library P... 68 7e-010
gb|BU814877.1|BU814877 N034D10 Populus bark cDNA library Po... 66 3e-009
gb|CK098101.1|CK098101 A004P43.5pR Hybrid aspen plasmid lib... 66 3e-009
gb|DN495308.1|DN495308 N034D10.5pR Populus bark cDNA librar... 66 3e-009
gb|CK112462.1|CK112462 S002F12 Populus imbibed seed cDNA li... 64 1e-008
gb|BU821219.1|BU821219 UB20CPE12 Populus tremula cambium cD... 58 7e-007
gb|BU865809.1|BU865809 S059A05 Populus imbibed seed cDNA li... 58 7e-007
gb|BU875072.1|BU875072 V002A06 Populus flower cDNA library ... 58 7e-007
gb|CF237304.1|CF237304 Ptajxtjxt4E11E1109 Poplar cDNA libra... 58 7e-007
gb|CX657320.1|CX657320 PO02040H09 Poplar SC cDNA library Po... 58 7e-007
gb|CF227344.1|CF227344 PtaD2E11E1109 Poplar cDNA library fr... 56 3e-006
gb|DN498192.1|DN498192 S003D06.5pR Populus imbibed seed cDN... 50 2e-004
gb|CK091903.1|CK091903 G057P02.3pR Populus tension wood cDN... 48 7e-004
gb|BI070125.1|BI070125 C014P38U Populus strain T89 leaves P... 44 0.010
gb|AI165692.1|AI165692 A088p08u Hybrid aspen plasmid librar... 42 0.041
gb|BU861778.1|BU861778 S006F04 Populus imbibed seed cDNA li... 40 0.16
gb|DT518357.1|DT518357 WS02436.B21_O18 PTxD-ICC-N-A-14 Popu... 40 0.16
>gb|CA925824.1|CA925824 MTU7TL.P6.D02 Aspen leaf cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 466
Score = 216 bits (109), Expect = 1e-054
Identities = 322/393 (81%)
Strand = Plus / Plus
Query: 272 ctacttgatgtactgggagacccacttgaaaccatcaccgtagcccatcttgcgaacaac 331
|||||||||||| || || | ||||||||| |||||||| || ||||||||||| ||||
Sbjct: 24 ctacttgatgtattgagacatccacttgaagccatcaccatatcccatcttgcggacaat 83
Query: 332 actgcacatgaagacctcaagtggacggacattggagtcgccaaggttgaccttgccctt 391
|||||||||||| ||||| || ||||||||||||||||| |||| || ||||| |||||
Sbjct: 84 actgcacatgaaaacctcgagaggacggacattggagtccacaagattcaccttcccctt 143
Query: 392 cccggttgtgaagttgctaaggcctaggtgataccgtagctcctcttcagaggcagcata 451
|| || ||||| ||| | || || || ||||| || ||||| ||||| || || |||||
Sbjct: 144 gccagtagtgaaattgttgagcccaagatgataacgaagctcatcttctgaagctgcata 203
Query: 452 tgggatatcaatcttgttgccaaggatgagaaatggaacattggccaaagaatcatcaga 511
|| || |||||||||||||| | ||| |||||||||||| | ||||| || ||||| ||
Sbjct: 204 gggaatgtcaatcttgttgcctaagatcagaaatggaacagtcgccaaggattcatctga 263
Query: 512 caggagagcatcgagctccttctttgattcagcaaatcgctccttatcatatgcatctac 571
||||| ||||| || ||||||||||| |||||||| | |||||| |||| ||||| ||
Sbjct: 264 aaggagggcatccagttccttctttgactcagcaaacctctccttgtcattggcatccac 323
Query: 572 caggtatactacagcatcaacctttgcgtagtaatccttccacacgcggcgcgcgatctg 631
|||||||| || ||||| ||||| ||||||||||||||||| || || || || || ||
Sbjct: 324 taggtataccaccgcatccaccttggcgtagtaatccttccaaacacgacgggcaatttg 383
Query: 632 gtggccgccgaggtcgaacgccttgaacttgat 664
||| || || || || || ||||||||||||||
Sbjct: 384 gtgacctcccagatcaaaagccttgaacttgat 416
>gb|CA926734.1|CA926734 MTU6CR.P18.E09 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 469
Score = 216 bits (109), Expect = 1e-054
Identities = 322/393 (81%)
Strand = Plus / Plus
Query: 272 ctacttgatgtactgggagacccacttgaaaccatcaccgtagcccatcttgcgaacaac 331
|||||||||||| || || | ||||||||| |||||||| || ||||||||||| ||||
Sbjct: 24 ctacttgatgtattgagacatccacttgaagccatcaccatatcccatcttgcggacaat 83
Query: 332 actgcacatgaagacctcaagtggacggacattggagtcgccaaggttgaccttgccctt 391
|||||||||||| ||||| || ||||||||||||||||| |||| || ||||| |||||
Sbjct: 84 actgcacatgaaaacctcgagaggacggacattggagtccacaagattcaccttcccctt 143
Query: 392 cccggttgtgaagttgctaaggcctaggtgataccgtagctcctcttcagaggcagcata 451
|| || ||||| ||| | || || || ||||| || ||||| ||||| || || |||||
Sbjct: 144 gccagtagtgaaattgttgagcccaagatgataacgaagctcatcttctgaagctgcata 203
Query: 452 tgggatatcaatcttgttgccaaggatgagaaatggaacattggccaaagaatcatcaga 511
|| || |||||||||||||| | ||| |||||||||||| | ||||| || ||||| ||
Sbjct: 204 gggaatgtcaatcttgttgcctaagatcagaaatggaacagtcgccaaggattcatctga 263
Query: 512 caggagagcatcgagctccttctttgattcagcaaatcgctccttatcatatgcatctac 571
||||| ||||| || ||||||||||| |||||||| | |||||| |||| ||||| ||
Sbjct: 264 aaggagggcatccagttccttctttgactcagcaaacctctccttgtcattggcatccac 323
Query: 572 caggtatactacagcatcaacctttgcgtagtaatccttccacacgcggcgcgcgatctg 631
|||||||| || ||||| ||||| ||||||||||||||||| || || || || || ||
Sbjct: 324 taggtataccaccgcatccaccttggcgtagtaatccttccaaacacgacgggcaatttg 383
Query: 632 gtggccgccgaggtcgaacgccttgaacttgat 664
||| || || || || || ||||||||||||||
Sbjct: 384 gtgacctcccagatcaaaagccttgaacttgat 416
>gb|CV232090.1|CV232090 WS0196.B21_I09 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0196_I09 3', mRNA sequence
Length = 737
Score = 216 bits (109), Expect = 1e-054
Identities = 322/393 (81%)
Strand = Plus / Plus
Query: 272 ctacttgatgtactgggagacccacttgaaaccatcaccgtagcccatcttgcgaacaac 331
|||||||||||| || || | ||||||||| |||||||| || ||||||||||| ||||
Sbjct: 201 ctacttgatgtattgagacatccacttgaagccatcaccatatcccatcttgcggacaat 260
Query: 332 actgcacatgaagacctcaagtggacggacattggagtcgccaaggttgaccttgccctt 391
|||||||||||| ||||| || ||||||||||||||||| |||| || ||||| |||||
Sbjct: 261 actgcacatgaaaacctcgagaggacggacattggagtccacaagattcaccttcccctt 320
Query: 392 cccggttgtgaagttgctaaggcctaggtgataccgtagctcctcttcagaggcagcata 451
|| || ||||| ||| | || || || | ||| || ||||| ||||| || || |||||
Sbjct: 321 gccagtagtgaaattgttgagcccaagatcataacgaagctcatcttctgaagctgcata 380
Query: 452 tgggatatcaatcttgttgccaaggatgagaaatggaacattggccaaagaatcatcaga 511
|| || |||||||||||||| | ||| |||||||||||||| ||||| || ||||| ||
Sbjct: 381 gggaatgtcaatcttgttgcctaagatcagaaatggaacattagccaaggattcatctga 440
Query: 512 caggagagcatcgagctccttctttgattcagcaaatcgctccttatcatatgcatctac 571
||||| ||||| || ||||||||||| |||||||| | |||| ||||| ||||| ||
Sbjct: 441 aaggagggcatccagttccttctttgactcagcaaacctaaccttgtcataggcatccac 500
Query: 572 caggtatactacagcatcaacctttgcgtagtaatccttccacacgcggcgcgcgatctg 631
|||||||| || ||||| ||||| ||||||||||||||||| || || || ||||| ||
Sbjct: 501 taggtataccaccgcatccaccttggcgtagtaatccttccaaacacgacgggcgatttg 560
Query: 632 gtggccgccgaggtcgaacgccttgaacttgat 664
||| || || || || || ||||||||||||||
Sbjct: 561 gtgaccacccagatcaaaagccttgaacttgat 593
>gb|CV251335.1|CV251335 WS0116.B21_K09 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS0116_K09 3', mRNA sequence
Length = 690
Score = 216 bits (109), Expect = 1e-054
Identities = 322/393 (81%)
Strand = Plus / Plus
Query: 272 ctacttgatgtactgggagacccacttgaaaccatcaccgtagcccatcttgcgaacaac 331
|||||||||||| || || | ||||||||| |||||||| || ||||||||||| ||||
Sbjct: 274 ctacttgatgtattgagacatccacttgaagccatcaccatatcccatcttgcggacaat 333
Query: 332 actgcacatgaagacctcaagtggacggacattggagtcgccaaggttgaccttgccctt 391
|||||||||||| ||||| || ||||||||||||||||| |||| || ||||| |||||
Sbjct: 334 actgcacatgaaaacctcgagaggacggacattggagtccacaagattcaccttcccctt 393
Query: 392 cccggttgtgaagttgctaaggcctaggtgataccgtagctcctcttcagaggcagcata 451
|| || ||||| ||| | || || || | ||| || ||||| ||||| || || |||||
Sbjct: 394 gccagtagtgaaattgttgagcccaagatcataacgaagctcatcttctgaagctgcata 453
Query: 452 tgggatatcaatcttgttgccaaggatgagaaatggaacattggccaaagaatcatcaga 511
|| || |||||||||||||| | ||| |||||||||||||| ||||| || ||||| ||
Sbjct: 454 gggaatgtcaatcttgttgcctaagatcagaaatggaacattagccaaggattcatctga 513
Query: 512 caggagagcatcgagctccttctttgattcagcaaatcgctccttatcatatgcatctac 571
||||| ||||| || ||||||||||| |||||||| | |||| ||||| ||||| ||
Sbjct: 514 aaggagggcatccagttccttctttgactcagcaaacctaaccttgtcataggcatccac 573
Query: 572 caggtatactacagcatcaacctttgcgtagtaatccttccacacgcggcgcgcgatctg 631
|||||||| || ||||| ||||| ||||||||||||||||| || || || ||||| ||
Sbjct: 574 taggtataccaccgcatccaccttggcgtagtaatccttccaaacacgacgggcgatttg 633
Query: 632 gtggccgccgaggtcgaacgccttgaacttgat 664
||| || || || || || ||||||||||||||
Sbjct: 634 gtgaccacccagatcaaaagccttgaacttgat 666
>gb|CX659690.1|CX659690 PO01033G12 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01033G12 5', mRNA sequence
Length = 703
Score = 216 bits (109), Expect = 1e-054
Identities = 322/393 (81%)
Strand = Plus / Minus
Query: 272 ctacttgatgtactgggagacccacttgaaaccatcaccgtagcccatcttgcgaacaac 331
|||||||||||| || || | ||||||||| |||||||| || ||||||||||| ||||
Sbjct: 520 ctacttgatgtattgagacatccacttgaagccatcaccatatcccatcttgcggacaat 461
Query: 332 actgcacatgaagacctcaagtggacggacattggagtcgccaaggttgaccttgccctt 391
|||||||||||| ||||| || ||||||||||||||||| |||| || ||||| |||||
Sbjct: 460 actgcacatgaaaacctcgagaggacggacattggagtccacaagattcaccttcccctt 401
Query: 392 cccggttgtgaagttgctaaggcctaggtgataccgtagctcctcttcagaggcagcata 451
|| || ||||| ||| | || || || ||||| || ||||| ||||| || || |||||
Sbjct: 400 gccagtagtgaaattgttgagcccaagatgataacgaagctcatcttctgaagctgcata 341
Query: 452 tgggatatcaatcttgttgccaaggatgagaaatggaacattggccaaagaatcatcaga 511
|| || |||||||||||||| | ||| |||||||||||| | ||||| || ||||| ||
Sbjct: 340 gggaatgtcaatcttgttgcctaagatcagaaatggaacagtcgccaaggattcatctga 281
Query: 512 caggagagcatcgagctccttctttgattcagcaaatcgctccttatcatatgcatctac 571
||||| ||||| || ||||||||||| |||||||| | |||||| |||| ||||| ||
Sbjct: 280 aaggagggcatccagttccttctttgactcagcaaacctctccttgtcattggcatccac 221
Query: 572 caggtatactacagcatcaacctttgcgtagtaatccttccacacgcggcgcgcgatctg 631
|||||||| || ||||| ||||| ||||||||||||||||| || || || || || ||
Sbjct: 220 taggtataccaccgcatccaccttggcgtagtaatccttccaaacacgacgggcaatttg 161
Query: 632 gtggccgccgaggtcgaacgccttgaacttgat 664
||| || || || || || ||||||||||||||
Sbjct: 160 gtgacctcccagatcaaaagccttgaacttgat 128
>gb|CV272415.1|CV272415 WS0157.B21_J15 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0157_J15 3', mRNA sequence
Length = 699
Score = 214 bits (108), Expect = 5e-054
Identities = 441/552 (79%)
Strand = Plus / Plus
Query: 278 gatgtactgggagacccacttgaaaccatcaccgtagcccatcttgcgaacaacactgca 337
||||||||| || | |||| ||||||| || ||||| ||||||||||| |||| || ||
Sbjct: 142 gatgtactgagaaagccacctgaaaccttctccgtaacccatcttgcggacaatgctaca 201
Query: 338 catgaagacctcaagtggacggacattggagtcgccaaggttgaccttgcccttcccggt 397
|||||||||||| |||||||| ||||| ||||| || | ||| ||||| ||||| |||||
Sbjct: 202 catgaagacctcgagtggacgaacatttgagtctcccaagttcacctttcccttgccggt 261
Query: 398 tgtgaagttgctaaggcctaggtgataccgtagctcctcttcagaggcagcatatgggat 457
||||||||| |||||| ||||| ||||| | ||| ||||| |||||||||||||| ||
Sbjct: 262 ggtgaagttgacaaggccaaggtggtaccgcaactcttcttctgaggcagcatatggaat 321
Query: 458 atcaatcttgttgccaaggatgagaaatggaacattggccaaagaatcatcagacaggag 517
||| ||||||||||| | | || || || |||||||| || | |||||||| |||||
Sbjct: 322 atcgatcttgttgcccaaaacaaggaaggggacattggctaatgcttcatcagagaggag 381
Query: 518 agcatcgagctccttctttgattcagcaaatcgctccttatcatatgcatctaccaggta 577
|||||| || || |||||||||||||| |||| ||| || || || ||||||||||||||
Sbjct: 382 agcatctagttctttctttgattcagctaatctctctttgtcgtaagcatctaccaggta 441
Query: 578 tactacagcatcaacctttgcgtagtaatccttccacacgcggcgcgcgatctggtggcc 637
|| || ||||| ||||| || |||||||| ||||| || || || || ||||| |||||
Sbjct: 442 aacaactgcatccaccttggcatagtaatctttccaaactcgacgagcaatctgatggcc 501
Query: 638 gccgaggtcgaacgccttgaacttgatcttgccgatgctgagctcctccgacgtcgggtg 697
||| | || || ||||| ||||||||||| || ||||| | |||||| || || || |
Sbjct: 502 gcccaaatcaaaagccttaaacttgatcttccctatgctcaactcctctgatgttggata 561
Query: 698 ctgcgtcggctggtgctgcaccaaccgctcgtccttgagcatgtggagcagcgtggtctt 757
||| || |||||||| ||||| || | ||| || || | |||||| |||| ||||| ||
Sbjct: 562 ctgtgtaggctggtgttgcactaatctctcatcttttaacatgtgaagcaaggtggtttt 621
Query: 758 gccggcgttgtcgaggccaaggaagaggatcttggcctccttctgccacaggccgaggga 817
||| || || || ||||| | ||| | ||||||||| || || ||||||| || || ||
Sbjct: 622 gccagcattatcaaggcccaagaacaagatcttggcttctttttgccacaaaccaagtga 681
Query: 818 ggccagcacccc 829
|||||||||||
Sbjct: 682 tgccagcacccc 693
>gb|CA931968.1|CA931968 MTU4TA.P25.C03 Aspen apex cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 466
Score = 208 bits (105), Expect = 3e-052
Identities = 321/393 (81%)
Strand = Plus / Plus
Query: 272 ctacttgatgtactgggagacccacttgaaaccatcaccgtagcccatcttgcgaacaac 331
|||||||||||| | || | ||||||||| |||||||| || ||||||||||| ||||
Sbjct: 24 ctacttgatgtatcgagacatccacttgaagccatcaccatatcccatcttgcggacaat 83
Query: 332 actgcacatgaagacctcaagtggacggacattggagtcgccaaggttgaccttgccctt 391
|||||||||||| ||||| || ||||||||||||||||| |||| || ||||| |||||
Sbjct: 84 actgcacatgaaaacctcgagaggacggacattggagtccacaagattcaccttcccctt 143
Query: 392 cccggttgtgaagttgctaaggcctaggtgataccgtagctcctcttcagaggcagcata 451
|| || ||||| ||| | || || || ||||| || ||||| ||||| || || |||||
Sbjct: 144 gccagtagtgaaattgttgagcccaagatgataacgaagctcatcttctgaagctgcata 203
Query: 452 tgggatatcaatcttgttgccaaggatgagaaatggaacattggccaaagaatcatcaga 511
|| || |||||||||||||| | ||| |||||||||||| | ||||| || ||||| ||
Sbjct: 204 gggaatgtcaatcttgttgcctaagatcagaaatggaacagtcgccaaggattcatctga 263
Query: 512 caggagagcatcgagctccttctttgattcagcaaatcgctccttatcatatgcatctac 571
||||| ||||| || ||||||||||| |||||||| | |||||| |||| ||||| ||
Sbjct: 264 aaggagggcatccagttccttctttgactcagcaaacctctccttgtcattggcatccac 323
Query: 572 caggtatactacagcatcaacctttgcgtagtaatccttccacacgcggcgcgcgatctg 631
|||||||| || ||||| ||||| ||||||||||||||||| || || || || || ||
Sbjct: 324 taggtataccaccgcatccaccttggcgtagtaatccttccaaacacgacgggcaatttg 383
Query: 632 gtggccgccgaggtcgaacgccttgaacttgat 664
||| || || || || || ||||||||||||||
Sbjct: 384 gtgacctcccagatcaaaagccttgaacttgat 416
>gb|CV256200.1|CV256200 WS0243.B21_D08 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0243_D08 3', mRNA sequence
Length = 842
Score = 208 bits (105), Expect = 3e-052
Identities = 447/561 (79%)
Strand = Plus / Plus
Query: 278 gatgtactgggagacccacttgaaaccatcaccgtagcccatcttgcgaacaacactgca 337
||||||||| || | |||| ||||||| || ||||| ||||||||||| |||| || ||
Sbjct: 167 gatgtactgagaaagccacctgaaaccctctccgtaacccatcttgcggacaatgctaca 226
Query: 338 catgaagacctcaagtggacggacattggagtcgccaaggttgaccttgcccttcccggt 397
|||||||||||| |||||||| ||||| ||||| || | ||| ||||| ||||| |||||
Sbjct: 227 catgaagacctcgagtggacgaacatttgagtctcccaagttcacctttcccttgccggt 286
Query: 398 tgtgaagttgctaaggcctaggtgataccgtagctcctcttcagaggcagcatatgggat 457
||||||||| |||||| ||||| ||||| | ||| ||||| |||||||||||||| ||
Sbjct: 287 ggtgaagttgacaaggccaaggtggtaccgcaactcttcttctgaggcagcatatggaat 346
Query: 458 atcaatcttgttgccaaggatgagaaatggaacattggccaaagaatcatcagacaggag 517
||| ||||||||||| | | || || || |||||||| || | |||||||| |||||
Sbjct: 347 atcgatcttgttgcccaaaacaaggaaggggacattggctaatgcttcatcagagaggag 406
Query: 518 agcatcgagctccttctttgattcagcaaatcgctccttatcatatgcatctaccaggta 577
|||||| || || |||||||||||||| || | ||| || || || ||||||||||||||
Sbjct: 407 agcatctagttctttctttgattcagctaacctctctttgtcgtaagcatctaccaggta 466
Query: 578 tactacagcatcaacctttgcgtagtaatccttccacacgcggcgcgcgatctggtggcc 637
|| || ||||| ||||| || |||||||| ||||| || || || || ||||| |||||
Sbjct: 467 aacaactgcatccaccttggcatagtaatctttccaaactcgacgagcaatctgatggcc 526
Query: 638 gccgaggtcgaacgccttgaacttgatcttgccgatgctgagctcctccgacgtcgggtg 697
||| | || || ||||| ||||||||||| || ||||| | |||||| || || || |
Sbjct: 527 gcccaaatcaaaagccttaaacttgatcttccctatgctcaactcctctgatgttggata 586
Query: 698 ctgcgtcggctggtgctgcaccaaccgctcgtccttgagcatgtggagcagcgtggtctt 757
||| || |||||||| ||||| || | ||| || || | |||||| |||| ||||| ||
Sbjct: 587 ctgtgtaggctggtgttgcactaatctctcatcttttaacatgtgaagcaaggtggtttt 646
Query: 758 gccggcgttgtcgaggccaaggaagaggatcttggcctccttctgccacaggccgaggga 817
||| || || || ||||| | ||| | ||||||||| || || ||||||| || || ||
Sbjct: 647 gccagcattatcaaggcccaagaacaagatcttggcttctttttgccacaaaccaagtga 706
Query: 818 ggccagcaccccgtagaacca 838
||||||||||| || |||||
Sbjct: 707 tgccagcaccccataaaacca 727
>gb|CV282722.1|CV282722 WS0185.B21_G19 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0185_G19 3', mRNA sequence
Length = 785
Score = 208 bits (105), Expect = 3e-052
Identities = 447/561 (79%)
Strand = Plus / Plus
Query: 278 gatgtactgggagacccacttgaaaccatcaccgtagcccatcttgcgaacaacactgca 337
||||||||| || | |||| ||||||| || ||||| ||||||||||| |||| || ||
Sbjct: 151 gatgtactgagaaagccacctgaaaccttctccgtaacccatcttgcggacaatgctaca 210
Query: 338 catgaagacctcaagtggacggacattggagtcgccaaggttgaccttgcccttcccggt 397
|||||||||||| |||||||| ||||| ||||| || | ||| ||||| ||||| |||||
Sbjct: 211 catgaagacctcgagtggacgaacatttgagtctcccaagttcacctttcccttgccggt 270
Query: 398 tgtgaagttgctaaggcctaggtgataccgtagctcctcttcagaggcagcatatgggat 457
||||||||| |||||| ||||| ||||| | ||| ||||| |||||||||||||| ||
Sbjct: 271 ggtgaagttgacaaggccaaggtggtaccgcaactcttcttctgaggcagcatatggaat 330
Query: 458 atcaatcttgttgccaaggatgagaaatggaacattggccaaagaatcatcagacaggag 517
||| ||||||||||| | | || || || |||||||| || | |||||||| |||||
Sbjct: 331 atcgatcttgttgcccaaaacaaggaaggggacattggctaatgcttcatcagagaggag 390
Query: 518 agcatcgagctccttctttgattcagcaaatcgctccttatcatatgcatctaccaggta 577
|||||| || || |||||||||||||| || | ||| || || |||||||||||||||||
Sbjct: 391 agcatctagttctttctttgattcagctaacctctctttgtcgtatgcatctaccaggta 450
Query: 578 tactacagcatcaacctttgcgtagtaatccttccacacgcggcgcgcgatctggtggcc 637
|| || ||||| ||||| || |||||||| ||||| || || || || ||||| |||||
Sbjct: 451 aacaactgcatccaccttggcatagtaatctttccaaactcgacgagcaatctgatggcc 510
Query: 638 gccgaggtcgaacgccttgaacttgatcttgccgatgctgagctcctccgacgtcgggtg 697
||| | || || ||||| ||||||||||| || ||||| | |||||| || || || |
Sbjct: 511 gcccaaatcaaaagccttaaacttgatcttccctatgctcaactcctctgatgttggata 570
Query: 698 ctgcgtcggctggtgctgcaccaaccgctcgtccttgagcatgtggagcagcgtggtctt 757
||| || |||||||| ||||| || | ||| || || | ||| || |||| ||||| ||
Sbjct: 571 ctgtgtaggctggtgttgcactaatctctcatcttttaacatatgaagcaaggtggtttt 630
Query: 758 gccggcgttgtcgaggccaaggaagaggatcttggcctccttctgccacaggccgaggga 817
||| || || || ||||| | ||| | ||||||||| || || ||||||| || || ||
Sbjct: 631 gccagcattatcaaggcccaagaacaagatcttggcttctttttgccacaaaccaagtga 690
Query: 818 ggccagcaccccgtagaacca 838
||||||||||| || |||||
Sbjct: 691 tgccagcaccccataaaacca 711
>gb|DT501261.1|DT501261 WS01312.BR_B22 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01312_B22 5', mRNA sequence
Length = 724
Score = 208 bits (105), Expect = 3e-052
Identities = 447/561 (79%)
Strand = Plus / Minus
Query: 278 gatgtactgggagacccacttgaaaccatcaccgtagcccatcttgcgaacaacactgca 337
||||||||| || | |||| ||||||| || ||||| ||||||||||| |||| || ||
Sbjct: 701 gatgtactgagaaagccacctgaaaccttctccgtaacccatcttgcggacaatgctaca 642
Query: 338 catgaagacctcaagtggacggacattggagtcgccaaggttgaccttgcccttcccggt 397
|||||||||||| |||||||| ||||| ||||| || | ||| ||||| ||||| |||||
Sbjct: 641 catgaagacctcgagtggacgaacatttgagtctcccaagttcacctttcccttgccggt 582
Query: 398 tgtgaagttgctaaggcctaggtgataccgtagctcctcttcagaggcagcatatgggat 457
||||||||| |||||| ||||| ||||| | ||| ||||| |||||||||||||| ||
Sbjct: 581 ggtgaagttgacaaggccaaggtggtaccgcaactcttcttctgaggcagcatatggaat 522
Query: 458 atcaatcttgttgccaaggatgagaaatggaacattggccaaagaatcatcagacaggag 517
||| ||||||||||| | | || || || |||||||| || | |||||||| |||||
Sbjct: 521 atcgatcttgttgcccaaaacaaggaaggggacattggctaatgcttcatcagagaggag 462
Query: 518 agcatcgagctccttctttgattcagcaaatcgctccttatcatatgcatctaccaggta 577
|||||| || || |||||||||||||| || | ||| || || |||||||||||||||||
Sbjct: 461 agcatctagttctttctttgattcagctaacctctctttgtcgtatgcatctaccaggta 402
Query: 578 tactacagcatcaacctttgcgtagtaatccttccacacgcggcgcgcgatctggtggcc 637
|| || ||||| ||||| || |||||||| ||||| || || || || ||||| |||||
Sbjct: 401 aacaactgcatccaccttggcatagtaatctttccaaactcgacgagcaatctgatggcc 342
Query: 638 gccgaggtcgaacgccttgaacttgatcttgccgatgctgagctcctccgacgtcgggtg 697
||| | || || ||||| ||||||||||| || ||||| | |||||| || || || |
Sbjct: 341 gcccaaatcaaaagccttaaacttgatcttccctatgctcaactcctctgatgttggata 282
Query: 698 ctgcgtcggctggtgctgcaccaaccgctcgtccttgagcatgtggagcagcgtggtctt 757
||| || |||||||| ||||| || | ||| || || | ||| || |||| ||||| ||
Sbjct: 281 ctgtgtaggctggtgttgcactaatctctcatcttttaacatatgaagcaaggtggtttt 222
Query: 758 gccggcgttgtcgaggccaaggaagaggatcttggcctccttctgccacaggccgaggga 817
||| || || || ||||| | ||| | ||||||||| || || ||||||| || || ||
Sbjct: 221 gccagcattatcaaggcccaagaacaagatcttggcttctttttgccacaaaccaagtga 162
Query: 818 ggccagcaccccgtagaacca 838
||||||||||| || |||||
Sbjct: 161 tgccagcaccccataaaacca 141
>gb|DT504127.1|DT504127 WS01312.B21_B22 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01312_B22 3', mRNA sequence
Length = 872
Score = 208 bits (105), Expect = 3e-052
Identities = 447/561 (79%)
Strand = Plus / Plus
Query: 278 gatgtactgggagacccacttgaaaccatcaccgtagcccatcttgcgaacaacactgca 337
||||||||| || | |||| ||||||| || ||||| ||||||||||| |||| || ||
Sbjct: 172 gatgtactgagaaagccacctgaaaccttctccgtaacccatcttgcggacaatgctaca 231
Query: 338 catgaagacctcaagtggacggacattggagtcgccaaggttgaccttgcccttcccggt 397
|||||||||||| |||||||| ||||| ||||| || | ||| ||||| ||||| |||||
Sbjct: 232 catgaagacctcgagtggacgaacatttgagtctcccaagttcacctttcccttgccggt 291
Query: 398 tgtgaagttgctaaggcctaggtgataccgtagctcctcttcagaggcagcatatgggat 457
||||||||| |||||| ||||| ||||| | ||| ||||| |||||||||||||| ||
Sbjct: 292 ggtgaagttgacaaggccaaggtggtaccgcaactcttcttctgaggcagcatatggaat 351
Query: 458 atcaatcttgttgccaaggatgagaaatggaacattggccaaagaatcatcagacaggag 517
||| ||||||||||| | | || || || |||||||| || | |||||||| |||||
Sbjct: 352 atcgatcttgttgcccaaaacaaggaaggggacattggctaatgcttcatcagagaggag 411
Query: 518 agcatcgagctccttctttgattcagcaaatcgctccttatcatatgcatctaccaggta 577
|||||| || || |||||||||||||| || | ||| || || |||||||||||||||||
Sbjct: 412 agcatctagttctttctttgattcagctaacctctctttgtcgtatgcatctaccaggta 471
Query: 578 tactacagcatcaacctttgcgtagtaatccttccacacgcggcgcgcgatctggtggcc 637
|| || ||||| ||||| || |||||||| ||||| || || || || ||||| |||||
Sbjct: 472 aacaactgcatccaccttggcatagtaatctttccaaactcgacgagcaatctgatggcc 531
Query: 638 gccgaggtcgaacgccttgaacttgatcttgccgatgctgagctcctccgacgtcgggtg 697
||| | || || ||||| ||||||||||| || ||||| | |||||| || || || |
Sbjct: 532 gcccaaatcaaaagccttaaacttgatcttccctatgctcaactcctctgatgttggata 591
Query: 698 ctgcgtcggctggtgctgcaccaaccgctcgtccttgagcatgtggagcagcgtggtctt 757
||| || |||||||| ||||| || | ||| || || | ||| || |||| ||||| ||
Sbjct: 592 ctgtgtaggctggtgttgcactaatctctcatcttttaacatatgaagcaaggtggtttt 651
Query: 758 gccggcgttgtcgaggccaaggaagaggatcttggcctccttctgccacaggccgaggga 817
||| || || || ||||| | ||| | ||||||||| || || ||||||| || || ||
Sbjct: 652 gccagcattatcaaggcccaagaacaagatcttggcttctttttgccacaaaccaagtga 711
Query: 818 ggccagcaccccgtagaacca 838
||||||||||| || |||||
Sbjct: 712 tgccagcaccccataaaacca 732
>gb|BU871834.1|BU871834 Q035A12 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 660
Score = 202 bits (102), Expect = 2e-050
Identities = 321/393 (81%), Gaps = 2/393 (0%)
Strand = Plus / Minus
Query: 272 ctacttgatgtactgggagacccacttgaaaccatcaccgtagcccatcttgcgaacaac 331
|||||||||||| || || | ||||||||| |||||||| || ||||||||||| ||||
Sbjct: 576 ctacttgatgtattgagacatccacttgaagccatcaccatatcccatcttgcggacaat 517
Query: 332 actgcacatgaagacctcaagtggacggacattggagtcgccaaggttgaccttgccctt 391
|||||||||||| |||| || ||||||||||||||||| |||| || ||||| |||||
Sbjct: 516 actgcacatgaa--cctcgagaggacggacattggagtccacaagattcaccttcccctt 459
Query: 392 cccggttgtgaagttgctaaggcctaggtgataccgtagctcctcttcagaggcagcata 451
|| || ||||| ||| | || || || ||||| || ||||| ||||| || || |||||
Sbjct: 458 gccagtagtgaaattgttgagcccaagatgataacgaagctcatcttctgaagctgcata 399
Query: 452 tgggatatcaatcttgttgccaaggatgagaaatggaacattggccaaagaatcatcaga 511
|| || |||||||||||||| | ||| |||||||||||| | ||||| || ||||| ||
Sbjct: 398 gggaatgtcaatcttgttgcctaagatcagaaatggaacagtcgccaaggattcatctga 339
Query: 512 caggagagcatcgagctccttctttgattcagcaaatcgctccttatcatatgcatctac 571
||||| ||||| || ||||||||||| |||||||| | |||||| |||| ||||| ||
Sbjct: 338 aaggagggcatccagttccttctttgactcagcaaacctctccttgtcattggcatccac 279
Query: 572 caggtatactacagcatcaacctttgcgtagtaatccttccacacgcggcgcgcgatctg 631
|||||||| || ||||| ||||| ||||||||||||||||| || || || || || ||
Sbjct: 278 taggtataccaccgcatccaccttggcgtagtaatccttccaaacacgacgggcaatttg 219
Query: 632 gtggccgccgaggtcgaacgccttgaacttgat 664
||| || || || || || ||||||||||||||
Sbjct: 218 gtgacctcccagatcaaaagccttgaacttgat 186
>gb|CF230981.1|CF230981 PtaC0015H5H0515 Poplar cDNA library from cambial zone Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 719
Score = 200 bits (101), Expect = 7e-050
Identities = 320/393 (81%)
Strand = Plus / Minus
Query: 272 ctacttgatgtactgggagacccacttgaaaccatcaccgtagcccatcttgcgaacaac 331
||||||||| || || || | ||||||||| ||||||||||| ||||||||||| ||||
Sbjct: 529 ctacttgatatattgagacatccacttgaagccatcaccgtatcccatcttgcggacaat 470
Query: 332 actgcacatgaagacctcaagtggacggacattggagtcgccaaggttgaccttgccctt 391
|||||||||||| |||||||| ||||||||||||||||| | || || ||||| |||||
Sbjct: 469 actgcacatgaaaacctcaagaggacggacattggagtctaccagattcaccttcccctt 410
Query: 392 cccggttgtgaagttgctaaggcctaggtgataccgtagctcctcttcagaggcagcata 451
|| || ||||| ||| | || || || ||| || ||||| ||||| || ||||||||
Sbjct: 409 gccagtagtgaaattgttgagcccaagactataacggagctcatcttctgaagcagcata 350
Query: 452 tgggatatcaatcttgttgccaaggatgagaaatggaacattggccaaagaatcatcaga 511
|| || |||||||||||||| || || |||||||||||||| ||||| || ||||| ||
Sbjct: 349 gggaatgtcaatcttgttgcctagaatcagaaatggaacattagccaaggattcatctga 290
Query: 512 caggagagcatcgagctccttctttgattcagcaaatcgctccttatcatatgcatctac 571
||||| ||||| || ||||||||||| || ||||| | |||||| ||| | ||||| ||
Sbjct: 289 taggagggcatccagttccttctttgactcggcaaacctctccttgtcaaaggcatccac 230
Query: 572 caggtatactacagcatcaacctttgcgtagtaatccttccacacgcggcgcgcgatctg 631
||||| || || || || ||||| || |||||||| ||||| || || || ||||||||
Sbjct: 229 taggtaaaccacggcgtccaccttagcatagtaatctttccaaacacgacgagcgatctg 170
Query: 632 gtggccgccgaggtcgaacgccttgaacttgat 664
||||||||| | || || ||||||||||||||
Sbjct: 169 gtggccgcccaaatcaaaagccttgaacttgat 137
>gb|CX658954.1|CX658954 PO01024F01 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01024F01 5', mRNA sequence
Length = 542
Score = 200 bits (101), Expect = 7e-050
Identities = 320/393 (81%)
Strand = Plus / Minus
Query: 272 ctacttgatgtactgggagacccacttgaaaccatcaccgtagcccatcttgcgaacaac 331
||||||||| || || || | ||||||||| ||||||||||| ||||||||||| ||||
Sbjct: 526 ctacttgatatattgagacatccacttgaagccatcaccgtatcccatcttgcggacaat 467
Query: 332 actgcacatgaagacctcaagtggacggacattggagtcgccaaggttgaccttgccctt 391
|||||||||||| |||||||| ||||||||||||||||| | || || ||||| |||||
Sbjct: 466 actgcacatgaaaacctcaagaggacggacattggagtctaccagattcaccttcccctt 407
Query: 392 cccggttgtgaagttgctaaggcctaggtgataccgtagctcctcttcagaggcagcata 451
|| || ||||| ||| | || || || ||| || ||||| ||||| || ||||||||
Sbjct: 406 gccagtagtgaaattgttgagcccaagactataacggagctcatcttctgaagcagcata 347
Query: 452 tgggatatcaatcttgttgccaaggatgagaaatggaacattggccaaagaatcatcaga 511
|| || |||||||||||||| || || |||||||||||||| ||||| || ||||| ||
Sbjct: 346 gggaatgtcaatcttgttgcctagaatcagaaatggaacattagccaaggattcatctga 287
Query: 512 caggagagcatcgagctccttctttgattcagcaaatcgctccttatcatatgcatctac 571
||||| ||||| || ||||||||||| || ||||| | |||||| ||| | ||||| ||
Sbjct: 286 taggagggcatccagttccttctttgactcggcaaacctctccttgtcaaaggcatccac 227
Query: 572 caggtatactacagcatcaacctttgcgtagtaatccttccacacgcggcgcgcgatctg 631
||||| || || || || ||||| || |||||||| ||||| || || || ||||||||
Sbjct: 226 taggtaaaccacggcgtccaccttagcatagtaatctttccaaacacgacgagcgatctg 167
Query: 632 gtggccgccgaggtcgaacgccttgaacttgat 664
||||||||| | || || ||||||||||||||
Sbjct: 166 gtggccgcccaaatcaaaagccttgaacttgat 134
>gb|DT478590.1|DT478590 WS02523.BR_D13 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02523_D13 5', mRNA sequence
Length = 919
Score = 200 bits (101), Expect = 7e-050
Identities = 446/561 (79%)
Strand = Plus / Minus
Query: 278 gatgtactgggagacccacttgaaaccatcaccgtagcccatcttgcgaacaacactgca 337
||||||||| || | |||| ||||||| || ||||| ||||||||||| |||| || ||
Sbjct: 678 gatgtactgagaaagccacctgaaaccctctccgtaacccatcttgcggacaatgctaca 619
Query: 338 catgaagacctcaagtggacggacattggagtcgccaaggttgaccttgcccttcccggt 397
|||||||||||| |||||||| ||||| ||||| || | ||| ||||| ||||| |||||
Sbjct: 618 catgaagacctcgagtggacgaacatttgagtctcccaagttcacctttcccttgccggt 559
Query: 398 tgtgaagttgctaaggcctaggtgataccgtagctcctcttcagaggcagcatatgggat 457
||||||||| |||||| ||||| ||||| | ||| ||||| |||||||||||||| ||
Sbjct: 558 ggtgaagttgacaaggccaaggtggtaccgcaactcttcttctgaggcagcatatggaat 499
Query: 458 atcaatcttgttgccaaggatgagaaatggaacattggccaaagaatcatcagacaggag 517
||| ||||||||||| | | || || || |||||||| || | |||||||| |||||
Sbjct: 498 atcgatcttgttgcccaaaacaaggaaggggacattggctaatgcttcatcagagaggag 439
Query: 518 agcatcgagctccttctttgattcagcaaatcgctccttatcatatgcatctaccaggta 577
|||||| || || |||||||||||||| || | ||| || || || ||||||||||||||
Sbjct: 438 agcatctagttctttctttgattcagctaacctctctttgtcgtaagcatctaccaggta 379
Query: 578 tactacagcatcaacctttgcgtagtaatccttccacacgcggcgcgcgatctggtggcc 637
|| || ||||| ||||| || |||||||| ||||| || || || || ||||| |||||
Sbjct: 378 aacaactgcatccaccttggcatagtaatctttccaaactcgacgagcaatctgatggcc 319
Query: 638 gccgaggtcgaacgccttgaacttgatcttgccgatgctgagctcctccgacgtcgggtg 697
||| | || || ||||| ||||||||||| || ||||| | |||||| || || || |
Sbjct: 318 gcccaaatcaaaagccttaaacttgatcttccctatgctcaactcctctgatgttggata 259
Query: 698 ctgcgtcggctggtgctgcaccaaccgctcgtccttgagcatgtggagcagcgtggtctt 757
||| || |||||||| ||||| || | ||| || || | ||| || |||| ||||| ||
Sbjct: 258 ctgtgtaggctggtgttgcactaatctctcatcttttaacatatgaagcaaggtggtttt 199
Query: 758 gccggcgttgtcgaggccaaggaagaggatcttggcctccttctgccacaggccgaggga 817
||| || || || ||||| | ||| | ||||||||| || || ||||||| || || ||
Sbjct: 198 gccagcattatcaaggcccaagaacaagatcttggcttctttttgccacaaaccaagtga 139
Query: 818 ggccagcaccccgtagaacca 838
||||||||||| || |||||
Sbjct: 138 tgccagcaccccataaaacca 118
>gb|DT481584.1|DT481584 WS02532.BR_E22 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02532_E22 5', mRNA sequence
Length = 758
Score = 200 bits (101), Expect = 7e-050
Identities = 356/441 (80%)
Strand = Plus / Plus
Query: 278 gatgtactgggagacccacttgaaaccatcaccgtagcccatcttgcgaacaacactgca 337
||||||||| || | |||| ||||||| || ||||| ||||||||||| |||| || ||
Sbjct: 232 gatgtactgagaaagccacctgaaaccctctccgtaacccatcttgcggacaatgctaca 291
Query: 338 catgaagacctcaagtggacggacattggagtcgccaaggttgaccttgcccttcccggt 397
|||||||||||| |||||||| ||||| ||||| || | ||| ||||| ||||| |||||
Sbjct: 292 catgaagacctcgagtggacgaacatttgagtctcccaagttcacctttcccttgccggt 351
Query: 398 tgtgaagttgctaaggcctaggtgataccgtagctcctcttcagaggcagcatatgggat 457
||||||||| |||||| ||||| ||||| | ||| ||||| |||||||||||||| ||
Sbjct: 352 ggtgaagttgacaaggccaaggtggtaccgcaactcttcttctgaggcagcatatggaat 411
Query: 458 atcaatcttgttgccaaggatgagaaatggaacattggccaaagaatcatcagacaggag 517
||| ||||||||||| | | || || || |||||||| || | |||||||| |||||
Sbjct: 412 atcgatcttgttgcccaaaacaaggaaggggacattggctaatgcttcatcagagaggag 471
Query: 518 agcatcgagctccttctttgattcagcaaatcgctccttatcatatgcatctaccaggta 577
|||||| || || |||||||||||||| || | ||| || || || ||||||||||||||
Sbjct: 472 agcatctagttctttctttgattcagctaacctctctttgtcgtaagcatctaccaggta 531
Query: 578 tactacagcatcaacctttgcgtagtaatccttccacacgcggcgcgcgatctggtggcc 637
|| || ||||| ||||| || |||||||| ||||| || || || || ||||| |||||
Sbjct: 532 aacaactgcatccaccttggcatagtaatctttccaaactcgacgagcaatctgatggcc 591
Query: 638 gccgaggtcgaacgccttgaacttgatcttgccgatgctgagctcctccgacgtcgggtg 697
||| | || || ||||| ||||||||||| || ||||| | |||||| || || || |
Sbjct: 592 gcccaaatcaaaagccttaaacttgatcttccctatgctcaactcctctgatgttggata 651
Query: 698 ctgcgtcggctggtgctgcac 718
||| || |||||||| |||||
Sbjct: 652 ctgtgtaggctggtgttgcac 672
>gb|DT483661.1|DT483661 WS02523.B21_D13 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02523_D13 3', mRNA sequence
Length = 919
Score = 200 bits (101), Expect = 7e-050
Identities = 446/561 (79%)
Strand = Plus / Plus
Query: 278 gatgtactgggagacccacttgaaaccatcaccgtagcccatcttgcgaacaacactgca 337
||||||||| || | |||| ||||||| || ||||| ||||||||||| |||| || ||
Sbjct: 246 gatgtactgagaaagccacctgaaaccctctccgtaacccatcttgcggacaatgctaca 305
Query: 338 catgaagacctcaagtggacggacattggagtcgccaaggttgaccttgcccttcccggt 397
|||||||||||| |||||||| ||||| ||||| || | ||| ||||| ||||| |||||
Sbjct: 306 catgaagacctcgagtggacgaacatttgagtctcccaagttcacctttcccttgccggt 365
Query: 398 tgtgaagttgctaaggcctaggtgataccgtagctcctcttcagaggcagcatatgggat 457
||||||||| |||||| ||||| ||||| | ||| ||||| |||||||||||||| ||
Sbjct: 366 ggtgaagttgacaaggccaaggtggtaccgcaactcttcttctgaggcagcatatggaat 425
Query: 458 atcaatcttgttgccaaggatgagaaatggaacattggccaaagaatcatcagacaggag 517
||| ||||||||||| | | || || || |||||||| || | |||||||| |||||
Sbjct: 426 atcgatcttgttgcccaaaacaaggaaggggacattggctaatgcttcatcagagaggag 485
Query: 518 agcatcgagctccttctttgattcagcaaatcgctccttatcatatgcatctaccaggta 577
|||||| || || |||||||||||||| || | ||| || || || ||||||||||||||
Sbjct: 486 agcatctagttctttctttgattcagctaacctctctttgtcgtaagcatctaccaggta 545
Query: 578 tactacagcatcaacctttgcgtagtaatccttccacacgcggcgcgcgatctggtggcc 637
|| || ||||| ||||| || |||||||| ||||| || || || || ||||| |||||
Sbjct: 546 aacaactgcatccaccttggcatagtaatctttccaaactcgacgagcaatctgatggcc 605
Query: 638 gccgaggtcgaacgccttgaacttgatcttgccgatgctgagctcctccgacgtcgggtg 697
||| | || || ||||| ||||||||||| || ||||| | |||||| || || || |
Sbjct: 606 gcccaaatcaaaagccttaaacttgatcttccctatgctcaactcctctgatgttggata 665
Query: 698 ctgcgtcggctggtgctgcaccaaccgctcgtccttgagcatgtggagcagcgtggtctt 757
||| || |||||||| ||||| || | ||| || || | ||| || |||| ||||| ||
Sbjct: 666 ctgtgtaggctggtgttgcactaatctctcatcttttaacatatgaagcaaggtggtttt 725
Query: 758 gccggcgttgtcgaggccaaggaagaggatcttggcctccttctgccacaggccgaggga 817
||| || || || ||||| | ||| | ||||||||| || || ||||||| || || ||
Sbjct: 726 gccagcattatcaaggcccaagaacaagatcttggcttctttttgccacaaaccaagtga 785
Query: 818 ggccagcaccccgtagaacca 838
||||||||||| || |||||
Sbjct: 786 tgccagcaccccataaaacca 806
>gb|DT486924.1|DT486924 WS02532.B21_E22 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02532_E22 3', mRNA sequence
Length = 908
Score = 200 bits (101), Expect = 7e-050
Identities = 446/561 (79%)
Strand = Plus / Minus
Query: 278 gatgtactgggagacccacttgaaaccatcaccgtagcccatcttgcgaacaacactgca 337
||||||||| || | |||| ||||||| || ||||| ||||||||||| |||| || ||
Sbjct: 681 gatgtactgagaaagccacctgaaaccctctccgtaacccatcttgcggacaatgctaca 622
Query: 338 catgaagacctcaagtggacggacattggagtcgccaaggttgaccttgcccttcccggt 397
|||||||||||| |||||||| ||||| ||||| || | ||| ||||| ||||| |||||
Sbjct: 621 catgaagacctcgagtggacgaacatttgagtctcccaagttcacctttcccttgccggt 562
Query: 398 tgtgaagttgctaaggcctaggtgataccgtagctcctcttcagaggcagcatatgggat 457
||||||||| |||||| ||||| ||||| | ||| ||||| |||||||||||||| ||
Sbjct: 561 ggtgaagttgacaaggccaaggtggtaccgcaactcttcttctgaggcagcatatggaat 502
Query: 458 atcaatcttgttgccaaggatgagaaatggaacattggccaaagaatcatcagacaggag 517
||| ||||||||||| | | || || || |||||||| || | |||||||| |||||
Sbjct: 501 atcgatcttgttgcccaaaacaaggaaggggacattggctaatgcttcatcagagaggag 442
Query: 518 agcatcgagctccttctttgattcagcaaatcgctccttatcatatgcatctaccaggta 577
|||||| || || |||||||||||||| || | ||| || || || ||||||||||||||
Sbjct: 441 agcatctagttctttctttgattcagctaacctctctttgtcgtaagcatctaccaggta 382
Query: 578 tactacagcatcaacctttgcgtagtaatccttccacacgcggcgcgcgatctggtggcc 637
|| || ||||| ||||| || |||||||| ||||| || || || || ||||| |||||
Sbjct: 381 aacaactgcatccaccttggcatagtaatctttccaaactcgacgagcaatctgatggcc 322
Query: 638 gccgaggtcgaacgccttgaacttgatcttgccgatgctgagctcctccgacgtcgggtg 697
||| | || || ||||| ||||||||||| || ||||| | |||||| || || || |
Sbjct: 321 gcccaaatcaaaagccttaaacttgatcttccctatgctcaactcctctgatgttggata 262
Query: 698 ctgcgtcggctggtgctgcaccaaccgctcgtccttgagcatgtggagcagcgtggtctt 757
||| || |||||||| ||||| || | ||| || || | ||| || |||| ||||| ||
Sbjct: 261 ctgtgtaggctggtgttgcactaatctctcatcttttaacatatgaagcaaggtggtttt 202
Query: 758 gccggcgttgtcgaggccaaggaagaggatcttggcctccttctgccacaggccgaggga 817
||| || || || ||||| | ||| | ||||||||| || || ||||||| || || ||
Sbjct: 201 gccagcattatcaaggcccaagaacaagatcttggcttctttttgccacaaaccaagtga 142
Query: 818 ggccagcaccccgtagaacca 838
||||||||||| || |||||
Sbjct: 141 tgccagcaccccataaaacca 121
>gb|DT487567.1|DT487567 WS02534.B21_A18 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02534_A18 3', mRNA sequence
Length = 849
Score = 200 bits (101), Expect = 7e-050
Identities = 446/561 (79%)
Strand = Plus / Plus
Query: 278 gatgtactgggagacccacttgaaaccatcaccgtagcccatcttgcgaacaacactgca 337
||||||||| || | |||| ||||||| || ||||| ||||||||||| |||| || ||
Sbjct: 175 gatgtactgagaaagccacctgaaaccctctccgtaacccatcttgcggacaatgctaca 234
Query: 338 catgaagacctcaagtggacggacattggagtcgccaaggttgaccttgcccttcccggt 397
|||||||||||| |||||||| ||||| ||||| || | ||| ||||| ||||| |||||
Sbjct: 235 catgaagacctcgagtggacgaacatttgagtctcccaagttcacctttcccttgccggt 294
Query: 398 tgtgaagttgctaaggcctaggtgataccgtagctcctcttcagaggcagcatatgggat 457
||||||||| |||||| ||||| ||||| | ||| ||||| |||||||||||||| ||
Sbjct: 295 ggtgaagttgacaaggccaaggtggtaccgcaactcttcttctgaggcagcatatggaat 354
Query: 458 atcaatcttgttgccaaggatgagaaatggaacattggccaaagaatcatcagacaggag 517
||| ||||||||||| | | || || || |||||||| || | |||||||| |||||
Sbjct: 355 atcgatcttgttgcccaaaacaaggaaggggacattggctaatgcttcatcagagaggag 414
Query: 518 agcatcgagctccttctttgattcagcaaatcgctccttatcatatgcatctaccaggta 577
|||||| || || |||||||||||||| || | ||| || || || ||||||||||||||
Sbjct: 415 agcatctagttctttctttgattcagctaacctctctttgtcgtaagcatctaccaggta 474
Query: 578 tactacagcatcaacctttgcgtagtaatccttccacacgcggcgcgcgatctggtggcc 637
|| || ||||| ||||| || |||||||| ||||| || || || || ||||| |||||
Sbjct: 475 aacaactgcatccaccttggcatagtaatctttccaaactcgacgagcaatctgatggcc 534
Query: 638 gccgaggtcgaacgccttgaacttgatcttgccgatgctgagctcctccgacgtcgggtg 697
||| | || || ||||| ||||||||||| || ||||| | |||||| || || || |
Sbjct: 535 gcccaaatcaaaagccttaaacttgatcttccctatgctcaactcctctgatgttggata 594
Query: 698 ctgcgtcggctggtgctgcaccaaccgctcgtccttgagcatgtggagcagcgtggtctt 757
||| || |||||||| ||||| || | ||| || || | ||| || |||| ||||| ||
Sbjct: 595 ctgtgtaggctggtgttgcactaatctctcatcttttaacatatgaagcaaggtggtttt 654
Query: 758 gccggcgttgtcgaggccaaggaagaggatcttggcctccttctgccacaggccgaggga 817
||| || || || ||||| | ||| | ||||||||| || || ||||||| || || ||
Sbjct: 655 gccagcattatcaaggcccaagaacaagatcttggcttctttttgccacaaaccaagtga 714
Query: 818 ggccagcaccccgtagaacca 838
||||||||||| || |||||
Sbjct: 715 tgccagcaccccataaaacca 735
>gb|DT490083.1|DT490083 WS02543.B21_P20 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02543_P20 3', mRNA sequence
Length = 644
Score = 200 bits (101), Expect = 7e-050
Identities = 356/441 (80%)
Strand = Plus / Plus
Query: 278 gatgtactgggagacccacttgaaaccatcaccgtagcccatcttgcgaacaacactgca 337
||||||||| || | |||| ||||||| || ||||| ||||||||||| |||| || ||
Sbjct: 175 gatgtactgagaaagccacctgaaaccctctccgtaacccatcttgcggacaatgctaca 234
Query: 338 catgaagacctcaagtggacggacattggagtcgccaaggttgaccttgcccttcccggt 397
|||||||||||| |||||||| ||||| ||||| || | ||| ||||| ||||| |||||
Sbjct: 235 catgaagacctcgagtggacgaacatttgagtctcccaagttcacctttcccttgccggt 294
Query: 398 tgtgaagttgctaaggcctaggtgataccgtagctcctcttcagaggcagcatatgggat 457
||||||||| |||||| ||||| ||||| | ||| ||||| |||||||||||||| ||
Sbjct: 295 ggtgaagttgacaaggccaaggtggtaccgcaactcttcttctgaggcagcatatggaat 354
Query: 458 atcaatcttgttgccaaggatgagaaatggaacattggccaaagaatcatcagacaggag 517
||| ||||||||||| | | || || || |||||||| || | |||||||| |||||
Sbjct: 355 atcgatcttgttgcccaaaacaaggaaggggacattggctaatgcttcatcagagaggag 414
Query: 518 agcatcgagctccttctttgattcagcaaatcgctccttatcatatgcatctaccaggta 577
|||||| || || |||||||||||||| || | ||| || || || ||||||||||||||
Sbjct: 415 agcatctagttctttctttgattcagctaacctctctttgtcgtaagcatctaccaggta 474
Query: 578 tactacagcatcaacctttgcgtagtaatccttccacacgcggcgcgcgatctggtggcc 637
|| || ||||| ||||| || |||||||| ||||| || || || || ||||| |||||
Sbjct: 475 aacaactgcatccaccttggcatagtaatctttccaaactcgacgagcaatctgatggcc 534
Query: 638 gccgaggtcgaacgccttgaacttgatcttgccgatgctgagctcctccgacgtcgggtg 697
||| | || || ||||| ||||||||||| || ||||| | |||||| || || || |
Sbjct: 535 gcccaaatcaaaagccttaaacttgatcttccctatgctcaactcctctgatgttggata 594
Query: 698 ctgcgtcggctggtgctgcac 718
||| || |||||||| |||||
Sbjct: 595 ctgtgtaggctggtgttgcac 615
>gb|DT516435.1|DT516435 WS02431.B21_G04 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02431_G04 3', mRNA sequence
Length = 833
Score = 200 bits (101), Expect = 7e-050
Identities = 446/561 (79%)
Strand = Plus / Plus
Query: 278 gatgtactgggagacccacttgaaaccatcaccgtagcccatcttgcgaacaacactgca 337
||||||||| || | |||| ||||||| || ||||| ||||||||||| |||| || ||
Sbjct: 172 gatgtactgagaaagccacctgaaaccttctccgtaacccatcttgcggacaatgctaca 231
Query: 338 catgaagacctcaagtggacggacattggagtcgccaaggttgaccttgcccttcccggt 397
|||||||||||| |||||||| ||||| ||||| || | ||| ||||| ||||| |||||
Sbjct: 232 catgaagacctcgagtggacgaacatttgagtctcccaagttcacctttcccttgccggt 291
Query: 398 tgtgaagttgctaaggcctaggtgataccgtagctcctcttcagaggcagcatatgggat 457
||||||||| |||||| ||||| ||||| | ||| ||||| |||||||||||||| ||
Sbjct: 292 ggtgaagttgacaaggccaaggtggtaccgcaactcttcttctgaggcagcatatggaat 351
Query: 458 atcaatcttgttgccaaggatgagaaatggaacattggccaaagaatcatcagacaggag 517
||| ||||||||||| | | || || || |||||||| || | |||||||| |||||
Sbjct: 352 atcgatcttgttgcccaaaacaaggaaggggacattggctaatgcttcatcagagaggag 411
Query: 518 agcatcgagctccttctttgattcagcaaatcgctccttatcatatgcatctaccaggta 577
|||||| || || |||||||||||||| || | ||| || || || ||||||||||||||
Sbjct: 412 agcatctagttctttctttgattcagctaacctctctttgtcgtaagcatctaccaggta 471
Query: 578 tactacagcatcaacctttgcgtagtaatccttccacacgcggcgcgcgatctggtggcc 637
|| || ||||| ||||| || |||||||| ||||| || || || || ||||| |||||
Sbjct: 472 aacaactgcatccaccttggcatagtaatctttccaaactcgacgagcaatctgatggcc 531
Query: 638 gccgaggtcgaacgccttgaacttgatcttgccgatgctgagctcctccgacgtcgggtg 697
||| | || || ||||| ||||||||||| || ||||| | |||||| || || || |
Sbjct: 532 gcccaaatcaaaagccttaaacttgatcttccctatgctcaactcctctgatgttggata 591
Query: 698 ctgcgtcggctggtgctgcaccaaccgctcgtccttgagcatgtggagcagcgtggtctt 757
||| || |||||||| ||||| || | ||| || || | ||| || |||| ||||| ||
Sbjct: 592 ctgtgtaggctggtgttgcactaatctctcatcttttaacatatgaagcaaggtggtttt 651
Query: 758 gccggcgttgtcgaggccaaggaagaggatcttggcctccttctgccacaggccgaggga 817
||| || || || ||||| | ||| | ||||||||| || || ||||||| || || ||
Sbjct: 652 gccagcattatcaaggcccaagaacaagatcttggcttctttttgccacaaaccaagtga 711
Query: 818 ggccagcaccccgtagaacca 838
||||||||||| || |||||
Sbjct: 712 tgccagcaccccataaaacca 732
>gb|BU827781.1|BU827781 K008P84P Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 636
Score = 198 bits (100), Expect = 3e-049
Identities = 304/372 (81%)
Strand = Plus / Minus
Query: 293 ccacttgaaaccatcaccgtagcccatcttgcgaacaacactgcacatgaagacctcaag 352
||||||||| ||||||||||| ||||||||||| |||| |||||||||||| ||||||||
Sbjct: 618 ccacttgaagccatcaccgtatcccatcttgcggacaatactgcacatgaaaacctcaag 559
Query: 353 tggacggacattggagtcgccaaggttgaccttgcccttcccggttgtgaagttgctaag 412
||||||||||||||||| | || || ||||| ||||| || || ||||| ||| | ||
Sbjct: 558 aggacggacattggagtctaccagattcaccttccccttgccagtagtgaaattgttgag 499
Query: 413 gcctaggtgataccgtagctcctcttcagaggcagcatatgggatatcaatcttgttgcc 472
|| || ||| || ||||| ||||| || |||||||| || || ||||||||||||||
Sbjct: 498 cccaagactataacggagctcatcttctgaagcagcatagggaatgtcaatcttgttgcc 439
Query: 473 aaggatgagaaatggaacattggccaaagaatcatcagacaggagagcatcgagctcctt 532
|| || |||||||||||||| ||||| || ||||| || ||||| ||||| || |||||
Sbjct: 438 tagaatcagaaatggaacattagccaaggattcatctgataggagggcatccagttcctt 379
Query: 533 ctttgattcagcaaatcgctccttatcatatgcatctaccaggtatactacagcatcaac 592
|||||| || ||||| | |||||| ||| | ||||| || ||||| || || || || ||
Sbjct: 378 ctttgactcggcaaacctctccttgtcaaaggcatccactaggtaaaccacggcgtccac 319
Query: 593 ctttgcgtagtaatccttccacacgcggcgcgcgatctggtggccgccgaggtcgaacgc 652
||| || |||||||| ||||| || || || ||||||||||||||||| | || || ||
Sbjct: 318 cttagcatagtaatctttccaaacacgacgagcgatctggtggccgcccaaatcaaaagc 259
Query: 653 cttgaacttgat 664
||||||||||||
Sbjct: 258 cttgaacttgat 247
>gb|CV232524.1|CV232524 WS0197.B21_N22 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0197_N22 3', mRNA sequence
Length = 707
Score = 192 bits (97), Expect = 2e-047
Identities = 319/393 (81%)
Strand = Plus / Plus
Query: 272 ctacttgatgtactgggagacccacttgaaaccatcaccgtagcccatcttgcgaacaac 331
||||||||| || || || | ||||||||| ||||||||||| ||||||||||| ||||
Sbjct: 202 ctacttgatatattgagacatccacttgaagccatcaccgtatcccatcttgcggacaat 261
Query: 332 actgcacatgaagacctcaagtggacggacattggagtcgccaaggttgaccttgccctt 391
||| |||||||| |||||||| ||||||||||||||||| | || || ||||| |||||
Sbjct: 262 actacacatgaaaacctcaagaggacggacattggagtctaccagattcaccttcccctt 321
Query: 392 cccggttgtgaagttgctaaggcctaggtgataccgtagctcctcttcagaggcagcata 451
|| || ||||| ||| | || || || ||| || ||||| ||||| || ||||||||
Sbjct: 322 gccagtagtgaaattgttgagcccaagactataacggagctcatcttctgaagcagcata 381
Query: 452 tgggatatcaatcttgttgccaaggatgagaaatggaacattggccaaagaatcatcaga 511
|| || |||||||||||||| || || |||||||||||||| ||||| || ||||| ||
Sbjct: 382 gggaatgtcaatcttgttgcctagaatcagaaatggaacattagccaaggattcatctga 441
Query: 512 caggagagcatcgagctccttctttgattcagcaaatcgctccttatcatatgcatctac 571
||||| ||||| || ||||||||||| || ||||| | |||||| ||| | ||||| ||
Sbjct: 442 taggagggcatccagttccttctttgactcggcaaacctctccttgtcaaaggcatccac 501
Query: 572 caggtatactacagcatcaacctttgcgtagtaatccttccacacgcggcgcgcgatctg 631
||||| || || || || ||||| || |||||||| ||||| || || || ||||||||
Sbjct: 502 taggtaaaccacggcgtccaccttagcatagtaatctttccaaacacgacgagcgatctg 561
Query: 632 gtggccgccgaggtcgaacgccttgaacttgat 664
||||||||| | || || ||||||||||||||
Sbjct: 562 gtggccgcccaaatcaaaagccttgaacttgat 594
>gb|CV261857.1|CV261857 WS02017.B21_P11 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02017_P11 3', mRNA sequence
Length = 802
Score = 192 bits (97), Expect = 2e-047
Identities = 319/393 (81%)
Strand = Plus / Plus
Query: 272 ctacttgatgtactgggagacccacttgaaaccatcaccgtagcccatcttgcgaacaac 331
||||||||| || || || | ||||||||| ||||||||||| ||||||||||| ||||
Sbjct: 232 ctacttgatatattgagacatccacttgaagccatcaccgtatcccatcttgcggacaat 291
Query: 332 actgcacatgaagacctcaagtggacggacattggagtcgccaaggttgaccttgccctt 391
||| |||||||| |||||||| ||||||||||||||||| | || || ||||| |||||
Sbjct: 292 actacacatgaaaacctcaagaggacggacattggagtctaccagattcaccttcccctt 351
Query: 392 cccggttgtgaagttgctaaggcctaggtgataccgtagctcctcttcagaggcagcata 451
|| || ||||| ||| | || || || ||| || ||||| ||||| || ||||||||
Sbjct: 352 gccagtagtgaaattgttgagcccaagactataacggagctcatcttctgaagcagcata 411
Query: 452 tgggatatcaatcttgttgccaaggatgagaaatggaacattggccaaagaatcatcaga 511
|| || |||||||||||||| || || |||||||||||||| ||||| || ||||| ||
Sbjct: 412 gggaatgtcaatcttgttgcctagaatcagaaatggaacattagccaaggattcatctga 471
Query: 512 caggagagcatcgagctccttctttgattcagcaaatcgctccttatcatatgcatctac 571
||||| ||||| || ||||||||||| || ||||| | |||||| ||| | ||||| ||
Sbjct: 472 taggagggcatccagttccttctttgactcggcaaacctctccttgtcaaaggcatccac 531
Query: 572 caggtatactacagcatcaacctttgcgtagtaatccttccacacgcggcgcgcgatctg 631
||||| || || || || ||||| || |||||||| ||||| || || || ||||||||
Sbjct: 532 taggtaaaccacggcgtccaccttggcatagtaatctttccaaacacgacgagcgatctg 591
Query: 632 gtggccgccgaggtcgaacgccttgaacttgat 664
||||||||| | || || ||||||||||||||
Sbjct: 592 gtggccgcccaaatcaaaagccttgaacttgat 624
>gb|CA825610.1|CA825610 R62D03 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 589
Score = 190 bits (96), Expect = 7e-047
Identities = 303/372 (81%)
Strand = Plus / Minus
Query: 293 ccacttgaaaccatcaccgtagcccatcttgcgaacaacactgcacatgaagacctcaag 352
||||||||| ||||||||||| ||||||||||| |||| ||| |||||||| ||||||||
Sbjct: 569 ccacttgaagccatcaccgtatcccatcttgcggacaatactacacatgaaaacctcaag 510
Query: 353 tggacggacattggagtcgccaaggttgaccttgcccttcccggttgtgaagttgctaag 412
||||||||||||||||| | || || ||||| ||||| || || ||||| ||| | ||
Sbjct: 509 aggacggacattggagtctaccagattcaccttccccttgccagtagtgaaattgttgag 450
Query: 413 gcctaggtgataccgtagctcctcttcagaggcagcatatgggatatcaatcttgttgcc 472
|| || ||| || ||||| ||||| || |||||||| || || ||||||||||||||
Sbjct: 449 cccaagactataacggagctcatcttctgaagcagcatagggaatgtcaatcttgttgcc 390
Query: 473 aaggatgagaaatggaacattggccaaagaatcatcagacaggagagcatcgagctcctt 532
|| || |||||||||||||| ||||| || ||||| || ||||| ||||| || |||||
Sbjct: 389 tagaatcagaaatggaacattagccaaggattcatctgataggagggcatccagttcctt 330
Query: 533 ctttgattcagcaaatcgctccttatcatatgcatctaccaggtatactacagcatcaac 592
|||||| || ||||| | |||||| ||| | ||||| || ||||| || || || || ||
Sbjct: 329 ctttgactcggcaaacctctccttgtcaaaggcatccactaggtaaaccacggcgtcgac 270
Query: 593 ctttgcgtagtaatccttccacacgcggcgcgcgatctggtggccgccgaggtcgaacgc 652
||| || |||||||| ||||| || || || ||||||||||||||||| | || || ||
Sbjct: 269 cttagcatagtaatctttccaaacacgacgagcgatctggtggccgcccaaatcaaaagc 210
Query: 653 cttgaacttgat 664
||||||||||||
Sbjct: 209 cttgaacttgat 198
>gb|DT498889.1|DT498889 WS0116.BR_K09 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0116_K09
5', mRNA sequence
Length = 638
Score = 188 bits (95), Expect = 3e-046
Identities = 392/491 (79%)
Strand = Plus / Minus
Query: 315 cccatcttgcgaacaacactgcacatgaagacctcaagtggacggacattggagtcgcca 374
||||||||||| |||| |||||||||||| ||||| || ||||||||||||||||| ||
Sbjct: 633 cccatcttgcggacaatactgcacatgaaaacctcgagaggacggacattggagtccaca 574
Query: 375 aggttgaccttgcccttcccggttgtgaagttgctaaggcctaggtgataccgtagctcc 434
|| || ||||| ||||| || || ||||| ||| | || || || | ||| || |||||
Sbjct: 573 agattcaccttccccttgccagtagtgaaattgttgagcccaagatcataacgaagctca 514
Query: 435 tcttcagaggcagcatatgggatatcaatcttgttgccaaggatgagaaatggaacattg 494
||||| || || ||||| || || |||||||||||||| | ||| ||||||||||||||
Sbjct: 513 tcttctgaagctgcatagggaatgtcaatcttgttgcctaagatcagaaatggaacatta 454
Query: 495 gccaaagaatcatcagacaggagagcatcgagctccttctttgattcagcaaatcgctcc 554
||||| || ||||| || ||||| ||||| || ||||||||||| |||||||| | ||
Sbjct: 453 gccaaggattcatctgaaaggagggcatccagttccttctttgactcagcaaacctaacc 394
Query: 555 ttatcatatgcatctaccaggtatactacagcatcaacctttgcgtagtaatccttccac 614
|| ||||| ||||| || |||||||| || ||||| ||||| |||||||||||||||||
Sbjct: 393 ttgtcataggcatccactaggtataccaccgcatccaccttggcgtagtaatccttccaa 334
Query: 615 acgcggcgcgcgatctggtggccgccgaggtcgaacgccttgaacttgatcttgccgatg 674
|| || || ||||| ||||| || || || || || |||||||||||||| || || ||
Sbjct: 333 acacgacgggcgatttggtgaccacccagatcaaaagccttgaacttgatttttccaata 274
Query: 675 ctgagctcctccgacgtcgggtgctgcgtcggctggtgctgcaccaaccgctcgtccttg 734
|| | ||||| || || || ||||| || || || ||||| ||||| | |||||| ||
Sbjct: 273 ctcaattcctctgatgttggatgctgggtgggttgatgctgtaccaatctctcgtctttt 214
Query: 735 agcatgtggagcagcgtggtcttgccggcgttgtcgaggccaaggaagaggatcttggcc 794
| |||||| || || || |||||||| || || || || || | ||| || |||||||||
Sbjct: 213 aacatgtgaagaagggttgtcttgccagcattatcaagacccaagaaaagaatcttggcc 154
Query: 795 tccttctgcca 805
||||| |||||
Sbjct: 153 tccttttgcca 143
>gb|CA821727.1|CA821727 RSH06F08 two-month-old roots from clone 'Beaupre' grown for 19 days
under restricted irrigation Populus trichocarpa x
Populus deltoides cDNA 5', mRNA sequence
Length = 620
Score = 186 bits (94), Expect = 1e-045
Identities = 318/393 (80%)
Strand = Plus / Minus
Query: 272 ctacttgatgtactgggagacccacttgaaaccatcaccgtagcccatcttgcgaacaac 331
||||| ||| ||||| || | ||||||||| ||||| ||||| ||||||||||| ||||
Sbjct: 620 ctactngatatactgagacatccacttgaagccatcgccgtatcccatcttgcggacaat 561
Query: 332 actgcacatgaagacctcaagtggacggacattggagtcgccaaggttgaccttgccctt 391
||| |||||||| |||||||| |||||||||| |||||| | || || ||||| |||||
Sbjct: 560 actacacatgaaaacctcaagaggacggacatgggagtctaccagattcaccttcccctt 501
Query: 392 cccggttgtgaagttgctaaggcctaggtgataccgtagctcctcttcagaggcagcata 451
|| || ||||||||| | || || || ||| || ||||| ||||| || ||||||||
Sbjct: 500 gccagtagtgaagttgttgagcccaagactataacggagctcatcttctgaagcagcata 441
Query: 452 tgggatatcaatcttgttgccaaggatgagaaatggaacattggccaaagaatcatcaga 511
|| || |||||||||||||| || || |||||||||||||| ||||| || ||||| ||
Sbjct: 440 gggaatgtcaatcttgttgcctagaatcagaaatggaacattagccaaggattcatctga 381
Query: 512 caggagagcatcgagctccttctttgattcagcaaatcgctccttatcatatgcatctac 571
||||| ||||| || ||||||||||| || ||||| | |||||| ||| | ||||| ||
Sbjct: 380 taggagggcatccagttccttctttgactcggcaaacctctccttgtcaaaggcatccac 321
Query: 572 caggtatactacagcatcaacctttgcgtagtaatccttccacacgcggcgcgcgatctg 631
||||| || || || || ||||| || |||||||| ||||| || || || ||||||||
Sbjct: 320 taggtaaaccacggcgtccaccttagcatagtaatctttccagacacgacgagcgatctg 261
Query: 632 gtggccgccgaggtcgaacgccttgaacttgat 664
||||||||| | || || ||||||||||||||
Sbjct: 260 gtggccgcccaaatcaaaagccttgaacttgat 228
>gb|CF234133.1|CF234133 PtaJXO2H5H0515 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 646
Score = 180 bits (91), Expect = 7e-044
Identities = 301/372 (80%)
Strand = Plus / Minus
Query: 293 ccacttgaaaccatcaccgtagcccatcttgcgaacaacactgcacatgaagacctcaag 352
||||||| | |||||||| || ||||| ||||| |||| | |||||||||| ||||| ||
Sbjct: 635 ccacttgnagccatcaccatatcccattttgcggacaatantgcacatgaaaacctcgag 576
Query: 353 tggacggacattggagtcgccaaggttgaccttgcccttcccggttgtgaagttgctaag 412
||||||||||||||||| |||| || ||||| ||||| || || ||||| ||| | ||
Sbjct: 575 aggacggacattggagtccacaagattcaccttccccttgccagtagtgaaattgttgag 516
Query: 413 gcctaggtgataccgtagctcctcttcagaggcagcatatgggatatcaatcttgttgcc 472
|| || ||||| || ||||| |||| || || ||||| || || ||||||||||||||
Sbjct: 515 cccaagatgataacgaagctcatcttntgaagctgcatagggaatgtcaatcttgttgcc 456
Query: 473 aaggatgagaaatggaacattggccaaagaatcatcagacaggagagcatcgagctcctt 532
| ||| |||||||||||| | ||||| || ||||| || ||||| ||||| || |||||
Sbjct: 455 taagatcagaaatggaacagtcgccaaggattcatctgaaaggagggcatccagttcctt 396
Query: 533 ctttgattcagcaaatcgctccttatcatatgcatctaccaggtatactacagcatcaac 592
|||||| |||||||| | |||||| |||| ||||| || |||||||| || ||||| ||
Sbjct: 395 ctttgactcagcaaacctctccttgtcattggcatccactaggtataccaccgcatccac 336
Query: 593 ctttgcgtagtaatccttccacacgcggcgcgcgatctggtggccgccgaggtcgaacgc 652
||| ||||||||||||||||| || || || || || ||||| || || || || || ||
Sbjct: 335 cttggcgtagtaatccttccaaacacgacgggcaatttggtgacctcccagatcaaaagc 276
Query: 653 cttgaacttgat 664
||||||||||||
Sbjct: 275 cttgaacttgat 264
>gb|CX656671.1|CX656671 PO02022A01 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02022A01 5', mRNA sequence
Length = 570
Score = 172 bits (87), Expect = 2e-041
Identities = 366/459 (79%)
Strand = Plus / Minus
Query: 272 ctacttgatgtactgggagacccacttgaaaccatcaccgtagcccatcttgcgaacaac 331
||||||||| ||||| || | |||| ||||||| || || |||||||| ||||| ||||
Sbjct: 465 ctacttgatatactgagaaagccacctgaaaccctctccatagcccattttgcggacaat 406
Query: 332 actgcacatgaagacctcaagtggacggacattggagtcgccaaggttgaccttgccctt 391
| |||||||| ||||| || ||||||||||| ||||| | | ||| |||||||||||
Sbjct: 405 ggtacacatgaacacctcgaggggacggacatttgagtctaccaagttcaccttgccctt 346
Query: 392 cccggttgtgaagttgctaaggcctaggtgataccgtagctcctcttcagaggcagcata 451
||||| ||||||||| |||| || |||| | || | ||| ||||| ||||||||||
Sbjct: 345 gccggtggtgaagttggtaagacccaggtagaaacgcaactcatcttctgaggcagcatc 286
Query: 452 tgggatatcaatcttgttgccaaggatgagaaatggaacattggccaaagaatcatcaga 511
||||||||||||||||||||| | | ||||| || |||||||| || | ||||||||
Sbjct: 285 tgggatatcaatcttgttgcccaaaacaagaaaggggacattggctaatgcttcatcaga 226
Query: 512 caggagagcatcgagctccttctttgattcagcaaatcgctccttatcatatgcatctac 571
||||||||||| | || ||||| || || ||||||| ||| || ||||| ||||||||
Sbjct: 225 gaggagagcatccaattctttcttggactccgcaaatctctctttgtcataagcatctac 166
Query: 572 caggtatactacagcatcaacctttgcgtagtaatccttccacacgcggcgcgcgatctg 631
|||||| || |||||||| ||||| || |||||||| ||||| || || || || |||||
Sbjct: 165 caggtaaacaacagcatccaccttggcatagtaatctttccaaactcgacgggcaatctg 106
Query: 632 gtggccgccgaggtcgaacgccttgaacttgatcttgccgatgctgagctcctccgacgt 691
||||| || | || || |||||||||||||| ||||| || || | ||||| || ||
Sbjct: 105 atggccacccaaatcaaaagccttgaacttgattttgcctatactcaattcctctgatgt 46
Query: 692 cgggtgctgcgtcggctggtgctgcaccaaccgctcgtc 730
|| | |||||| ||||| ||||||||||| | ||||||
Sbjct: 45 tggatactgcgttggctgatgctgcaccaatctctcgtc 7
>gb|CK318683.1|CK318683 X9P02c03 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 747
Score = 168 bits (85), Expect = 3e-040
Identities = 399/504 (79%)
Strand = Plus / Minus
Query: 272 ctacttgatgtactgggagacccacttgaaaccatcaccgtagcccatcttgcgaacaac 331
||||||||| ||||| || | |||| ||||||| || || |||||||| ||||| ||||
Sbjct: 702 ctacttgatatactgagaaagccacctgaaaccctctccatagcccattttgcggacaat 643
Query: 332 actgcacatgaagacctcaagtggacggacattggagtcgccaaggttgaccttgccctt 391
|| |||||||| ||||| || ||||||||||| ||||| | | ||| ||||| |||||
Sbjct: 642 gctacacatgaacacctcgaggggacggacatttgagtctaccaagttcaccttaccctt 583
Query: 392 cccggttgtgaagttgctaaggcctaggtgataccgtagctcctcttcagaggcagcata 451
||||| ||||||||| |||| | |||| | || | ||| ||||| ||||||||||
Sbjct: 582 gccggtggtgaagttggtaagacncaggtagaaacgcaactcatcttctgaggcagcatc 523
Query: 452 tgggatatcaatcttgttgccaaggatgagaaatggaacattggccaaagaatcatcaga 511
||||||||||||||||||||| | | ||||| || |||||||| || | ||||||||
Sbjct: 522 tgggatatcaatcttgttgcccaaaacaagaaaggggacattggctaatgcttcatcaga 463
Query: 512 caggagagcatcgagctccttctttgattcagcaaatcgctccttatcatatgcatctac 571
||||||||||| | || ||||| || || ||||||| ||| || ||||| ||||||||
Sbjct: 462 gaggagagcatccaattctttcttggactccgcaaatctctctttgtcataagcatctac 403
Query: 572 caggtatactacagcatcaacctttgcgtagtaatccttccacacgcggcgcgcgatctg 631
|||||| || |||||||| ||||| || |||||||| ||||| || || || || |||||
Sbjct: 402 caggtaaacaacagcatccaccttggcatagtaatctttccaaactcgacgggcaatctg 343
Query: 632 gtggccgccgaggtcgaacgccttgaacttgatcttgccgatgctgagctcctccgacgt 691
||||| || | || || |||||||||||||| ||||| || || | ||||| || ||
Sbjct: 342 atggccacccaaatcaaaagccttgaacttgattttgcctatactcaattcctctgatgt 283
Query: 692 cgggtgctgcgtcggctggtgctgcaccaaccgctcgtccttgagcatgtggagcagcgt 751
|| | |||||| ||||| || |||||||| | |||||| || | |||||| |||| ||
Sbjct: 282 tggatactgcgttggctgatgttgcaccaatctctcgtcttttaacatgtgaagcaatgt 223
Query: 752 ggtcttgccggcgttgtcgaggcc 775
||| ||||| || || ||||||||
Sbjct: 222 ggttttgccagcattatcgaggcc 199
>gb|CV245673.1|CV245673 WS0259.B21_B05 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0259_B05 3', mRNA sequence
Length = 760
Score = 165 bits (83), Expect = 4e-039
Identities = 320/399 (80%)
Strand = Plus / Plus
Query: 272 ctacttgatgtactgggagacccacttgaaaccatcaccgtagcccatcttgcgaacaac 331
||||||||| ||||| || | |||| ||||||| || || |||||||| ||||| ||||
Sbjct: 209 ctacttgatatactgagaaagccacctgaaaccctctccatagcccattttgcggacaat 268
Query: 332 actgcacatgaagacctcaagtggacggacattggagtcgccaaggttgaccttgccctt 391
|| |||||||| ||||| || ||||||||||| ||||| | | ||| ||||| |||||
Sbjct: 269 gctacacatgaacacctcgaggggacggacatttgagtctaccaagttcaccttaccctt 328
Query: 392 cccggttgtgaagttgctaaggcctaggtgataccgtagctcctcttcagaggcagcata 451
||||| ||||||||| |||| || |||| | || | ||| ||||| ||||||||||
Sbjct: 329 gccggtggtgaagttggtaagacccaggtagaaacgcaactcatcttctgaggcagcatc 388
Query: 452 tgggatatcaatcttgttgccaaggatgagaaatggaacattggccaaagaatcatcaga 511
||||||||||||||||||||| | | ||||| || |||||||| || | ||||||||
Sbjct: 389 tgggatatcaatcttgttgcccaaaacaagaaaggggacattggctaatgcttcatcaga 448
Query: 512 caggagagcatcgagctccttctttgattcagcaaatcgctccttatcatatgcatctac 571
||||||||||| | || ||||| || || ||||||| ||| || ||||| ||||||||
Sbjct: 449 gaggagagcatccaattctttcttggactccgcaaatctctctttgtcataagcatctac 508
Query: 572 caggtatactacagcatcaacctttgcgtagtaatccttccacacgcggcgcgcgatctg 631
|||||| || |||||||| ||||| || |||||||| ||||| || || || || |||||
Sbjct: 509 caggtaaacaacagcatccaccttggcatagtaatctttccaaactcgacgggcaatctg 568
Query: 632 gtggccgccgaggtcgaacgccttgaacttgatcttgcc 670
||||| || | || || |||||||||||||| |||||
Sbjct: 569 atggccacccaaatcaaaagccttgaacttgattttgcc 607
>gb|CX181170.1|CX181170 D11_45-56_07.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 644
Score = 159 bits (80), Expect = 3e-037
Identities = 371/468 (79%)
Strand = Plus / Minus
Query: 293 ccacttgaaaccatcaccgtagcccatcttgcgaacaacactgcacatgaagacctcaag 352
|||| ||||||| || || |||||||| ||||| |||| || |||||||| ||||| ||
Sbjct: 632 ccacctgaaaccctctccatagcccattttgcggacaatgctacacatgaacacctcgag 573
Query: 353 tggacggacattggagtcgccaaggttgaccttgcccttcccggttgtgaagttgctaag 412
||||||||||| ||||| | | ||| ||||| ||||| ||||| ||||||||| ||||
Sbjct: 572 gggacggacatttgagtctaccaagttcaccttacccttgccggtggtgaagttggtaag 513
Query: 413 gcctaggtgataccgtagctcctcttcagaggcagcatatgggatatcaatcttgttgcc 472
|| |||| | || | ||| ||||| |||||||||| |||||||||||||||||||||
Sbjct: 512 acccaggtagaaacgcaactcatcttctgaggcagcatctgggatatcaatcttgttgcc 453
Query: 473 aaggatgagaaatggaacattggccaaagaatcatcagacaggagagcatcgagctcctt 532
| | ||||| || |||||||| || | |||||||| ||||||||||| | || ||
Sbjct: 452 caaaacaagaaaggggacattggctaatgcttcatcagagaggagagcatccaattcttt 393
Query: 533 ctttgattcagcaaatcgctccttatcatatgcatctaccaggtatactacagcatcaac 592
||| || || ||||||| ||| || ||||| |||||||||||||| || |||||||| ||
Sbjct: 392 cttggactccgcaaatctctctttgtcataagcatctaccaggtaaacaacagcatccac 333
Query: 593 ctttgcgtagtaatccttccacacgcggcgcgcgatctggtggccgccgaggtcgaacgc 652
||| || |||||||| ||||| || || || || ||||| ||||| || | || || ||
Sbjct: 332 cttggcatagtaatctttccaaactcgacgggcaatctgatggccacccaaatcaaaagc 273
Query: 653 cttgaacttgatcttgccgatgctgagctcctccgacgtcgggtgctgcgtcggctggtg 712
|||||||||||| ||||| || || | ||||| || || || | |||||| ||||| ||
Sbjct: 272 cttgaacttgattttgcctatactcaattcctctgatgttggatactgcgttggctgatg 213
Query: 713 ctgcaccaaccgctcgtccttgagcatgtggagcagcgtggtcttgcc 760
|||||||| | |||||| || | |||||| |||| ||||| |||||
Sbjct: 212 ttgcaccaatctctcgtcttttaacatgtgaagcaatgtggttttgcc 165
>gb|DT470274.1|DT470274 WS01920.C21_G04 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01920_G04 3', mRNA sequence
Length = 614
Score = 155 bits (78), Expect = 4e-036
Identities = 276/342 (80%)
Strand = Plus / Plus
Query: 272 ctacttgatgtactgggagacccacttgaaaccatcaccgtagcccatcttgcgaacaac 331
||||||||| ||||| || | |||| ||||||| || || |||||||| ||||| ||||
Sbjct: 252 ctacttgatatactgagaaagccacctgaaaccctctccatagcccattttgcggacaat 311
Query: 332 actgcacatgaagacctcaagtggacggacattggagtcgccaaggttgaccttgccctt 391
|| |||||||| ||||| || ||||||||||| ||||| | | ||| ||||| |||||
Sbjct: 312 gctacacatgaacacctcgaggggacggacatttgagtctaccaagttcaccttaccctt 371
Query: 392 cccggttgtgaagttgctaaggcctaggtgataccgtagctcctcttcagaggcagcata 451
||||| ||||||||| |||| || |||| | || | ||| ||||| ||||||||||
Sbjct: 372 gccggtggtgaagttggtaagacccaggtagaaacgcaactcatcttctgaggcagcatc 431
Query: 452 tgggatatcaatcttgttgccaaggatgagaaatggaacattggccaaagaatcatcaga 511
||||||||||||||||||||| | | ||||| || |||||||| || | ||||||||
Sbjct: 432 tgggatatcaatcttgttgcccaaaacaagaaaggggacattggctaatgcttcatcaga 491
Query: 512 caggagagcatcgagctccttctttgattcagcaaatcgctccttatcatatgcatctac 571
||||||||||| | || ||||| || || ||||||| ||| || ||||| ||||||||
Sbjct: 492 gaggagagcatccaattctttcttggactccgcaaatctctctttgtcataagcatctac 551
Query: 572 caggtatactacagcatcaacctttgcgtagtaatccttcca 613
|||||| || |||||||| ||||| || |||||||| |||||
Sbjct: 552 caggtaaacaacagcatccaccttggcatagtaatctttcca 593
>gb|CF227796.1|CF227796 PtaXM0004G2G0214 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 633
Score = 149 bits (75), Expect = 2e-034
Identities = 280/350 (80%)
Strand = Plus / Minus
Query: 315 cccatcttgcgaacaacactgcacatgaagacctcaagtggacggacattggagtcgcca 374
||||||||| | |||| |||||||||||| | ||||| ||||||||||||||||| |
Sbjct: 602 cccatcttgnggacaatactgcacatgaaancntcaagaggacggacattggagtctacc 543
Query: 375 aggttgaccttgcccttcccggttgtgaagttgctaaggcctaggtgataccgtagctcc 434
|| || | || ||||| || || ||||| ||| | || || || ||| || |||||
Sbjct: 542 agattcncnttccccttgccagtagtgaaattgttgagcccaagactataacggagctca 483
Query: 435 tcttcagaggcagcatatgggatatcaatcttgttgccaaggatgagaaatggaacattg 494
||||| || |||||||| || || |||||||||||||| || || ||||||||||||||
Sbjct: 482 tcttctgaagcagcatagggaatgtcaatcttgttgcctagaatcagaaatggaacatta 423
Query: 495 gccaaagaatcatcagacaggagagcatcgagctccttctttgattcagcaaatcgctcc 554
||||| || ||||| || ||||| ||||| || ||||||||||| || ||||| | ||||
Sbjct: 422 gccaaggattcatctgataggagggcatccagttccttctttgactcggcaaacctctcc 363
Query: 555 ttatcatatgcatctaccaggtatactacagcatcaacctttgcgtagtaatccttccac 614
|| ||| ||||||| || ||||| || || || || ||||| || |||||||| |||||
Sbjct: 362 ttgtcaaatgcatccactaggtaaaccaccgcgtccaccttagcatagtaatctttccaa 303
Query: 615 acgcggcgcgcgatctggtggccgccgaggtcgaacgccttgaacttgat 664
|| || || ||||||||||||||||| | || || ||||||||||||||
Sbjct: 302 acacgacgagcgatctggtggccgcccaaatcaaaagccttgaacttgat 253
>gb|DT492529.1|DT492529 WS02551.C21_A09 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02551_A09 3', mRNA sequence
Length = 666
Score = 147 bits (74), Expect = 1e-033
Identities = 275/342 (80%)
Strand = Plus / Plus
Query: 272 ctacttgatgtactgggagacccacttgaaaccatcaccgtagcccatcttgcgaacaac 331
||||||||| ||||| || | |||| | ||||| || || |||||||| ||||| ||||
Sbjct: 255 ctacttgatatactgagaaagccacctaaaaccctctccatagcccattttgcggacaat 314
Query: 332 actgcacatgaagacctcaagtggacggacattggagtcgccaaggttgaccttgccctt 391
|| |||||||| |||||||| ||||||||||| |||||| | | ||| ||||| |||||
Sbjct: 315 gctacacatgaatacctcaaggggacggacatttgagtcgaccaagttcaccttaccctt 374
Query: 392 cccggttgtgaagttgctaaggcctaggtgataccgtagctcctcttcagaggcagcata 451
|| || ||||||||| | || || |||| || || | ||| ||||| |||||||||||
Sbjct: 375 gccagtggtgaagttggtgagacccaggttgtaacgcaactcatcttccgaggcagcata 434
Query: 452 tgggatatcaatcttgttgccaaggatgagaaatggaacattggccaaagaatcatcaga 511
||||||||||||||||||||| | | ||||| || |||||||| || | ||||||||
Sbjct: 435 tgggatatcaatcttgttgcccaaaacaagaaaggggacattggctaatgcttcatcaga 494
Query: 512 caggagagcatcgagctccttctttgattcagcaaatcgctccttatcatatgcatctac 571
||||||||||| | |||||||| | || || |||| ||| || ||||| ||||||||
Sbjct: 495 gaggagagcatccaattccttcttggcctccgcgaatctctctttgtcataggcatctac 554
Query: 572 caggtatactacagcatcaacctttgcgtagtaatccttcca 613
|||||| | |||||||| ||||| || |||||||| |||||
Sbjct: 555 caggtaaataacagcatccaccttggcatagtaatctttcca 596
>gb|DN492590.1|DN492590 X027F04.3pR Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA clone X027F04 3', mRNA sequence
Length = 630
Score = 145 bits (73), Expect = 4e-033
Identities = 322/405 (79%)
Strand = Plus / Plus
Query: 272 ctacttgatgtactgggagacccacttgaaaccatcaccgtagcccatcttgcgaacaac 331
||||||||| ||||| || | |||| | ||||| || || |||||||| ||||| ||||
Sbjct: 226 ctacttgatatactgagaaagccacctaaaaccctctccatagcccattttgcggacaat 285
Query: 332 actgcacatgaagacctcaagtggacggacattggagtcgccaaggttgaccttgccctt 391
|| |||||||| |||||||| ||||||||||| |||||| | | ||| ||||| |||||
Sbjct: 286 gctacacatgaatacctcaaggggacggacatttgagtcgaccaagttcaccttaccctt 345
Query: 392 cccggttgtgaagttgctaaggcctaggtgataccgtagctcctcttcagaggcagcata 451
|| || ||||||||| | || || |||| || || | ||| ||||| |||||||||||
Sbjct: 346 gccagtggtgaagttggtgagacccaggttgtaacgcaactcatcttctgaggcagcata 405
Query: 452 tgggatatcaatcttgttgccaaggatgagaaatggaacattggccaaagaatcatcaga 511
||||||||||||||||||||| | | ||||| || |||||||| || | ||||||||
Sbjct: 406 tgggatatcaatcttgttgcccaaaacaagaaaggggacattggctaatgcttcatcaga 465
Query: 512 caggagagcatcgagctccttctttgattcagcaaatcgctccttatcatatgcatctac 571
||||||||||| | || ||||| | || || |||| ||| || ||||| ||||||||
Sbjct: 466 gaggagagcatccaattctttcttggcctccgcgaatctctctttgtcataagcatctac 525
Query: 572 caggtatactacagcatcaacctttgcgtagtaatccttccacacgcggcgcgcgatctg 631
|||||| | |||||||| ||||| || |||||||| ||||| || || || || |||||
Sbjct: 526 caggtaaataacagcatccaccttggcatagtaatctttccaaactcgacgagcaatctg 585
Query: 632 gtggccgccgaggtcgaacgccttgaacttgatcttgccgatgct 676
|| || || | || || |||||||||||||| ||||| |||||
Sbjct: 586 atgtccacccaaatcaaaagccttgaacttgattttgccaatgct 630
>gb|DN503693.1|DN503693 X018G08.3pR Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA clone X018G08 3', mRNA sequence
Length = 627
Score = 145 bits (73), Expect = 4e-033
Identities = 322/405 (79%)
Strand = Plus / Plus
Query: 272 ctacttgatgtactgggagacccacttgaaaccatcaccgtagcccatcttgcgaacaac 331
||||||||| ||||| || | |||| | ||||| || || |||||||| ||||| ||||
Sbjct: 223 ctacttgatatactgagaaagccacctaaaaccctctccatagcccattttgcggacaat 282
Query: 332 actgcacatgaagacctcaagtggacggacattggagtcgccaaggttgaccttgccctt 391
|| |||||||| |||||||| ||||||||||| |||||| | | ||| ||||| |||||
Sbjct: 283 gctacacatgaatacctcaaggggacggacatttgagtcgaccaagttcaccttaccctt 342
Query: 392 cccggttgtgaagttgctaaggcctaggtgataccgtagctcctcttcagaggcagcata 451
|| || ||||||||| | || || |||| || || | ||| ||||| |||||||||||
Sbjct: 343 gccagtggtgaagttggtgagacccaggttgtaacgcaactcatcttctgaggcagcata 402
Query: 452 tgggatatcaatcttgttgccaaggatgagaaatggaacattggccaaagaatcatcaga 511
||||||||||||||||||||| | | ||||| || |||||||| || | ||||||||
Sbjct: 403 tgggatatcaatcttgttgcccaaaacaagaaaggggacattggctaatgcttcatcaga 462
Query: 512 caggagagcatcgagctccttctttgattcagcaaatcgctccttatcatatgcatctac 571
||||||||||| | || ||||| | || || |||| ||| || ||||| ||||||||
Sbjct: 463 gaggagagcatccaattctttcttggcctccgcgaatctctctttgtcataagcatctac 522
Query: 572 caggtatactacagcatcaacctttgcgtagtaatccttccacacgcggcgcgcgatctg 631
|||||| | |||||||| ||||| || |||||||| ||||| || || || || |||||
Sbjct: 523 caggtaaataacagcatccaccttggcatagtaatctttccaaactcgacgagcaatctg 582
Query: 632 gtggccgccgaggtcgaacgccttgaacttgatcttgccgatgct 676
|| || || | || || |||||||||||||| ||||| |||||
Sbjct: 583 atgtccacccaaatcaaaagccttgaacttgattttgccaatgct 627
>gb|BU825782.1|BU825782 UK113TA07 Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 596
Score = 139 bits (70), Expect = 2e-031
Identities = 262/326 (80%)
Strand = Plus / Minus
Query: 435 tcttcagaggcagcatatgggatatcaatcttgttgccaaggatgagaaatggaacattg 494
||||| |||||||||| ||||||||||||||||||||| | | ||||| || ||||||
Sbjct: 541 tcttctgaggcagcatctgggatatcaatcttgttgcccaaaacaagaaaggggacattg 482
Query: 495 gccaaagaatcatcagacaggagagcatcgagctccttctttgattcagcaaatcgctcc 554
|| || | |||||||| ||||||||||| | || ||||| || || ||||||| |||
Sbjct: 481 gctaaggcttcatcagagaggagagcatccaattctttcttggactccgcaaatctctct 422
Query: 555 ttatcatatgcatctaccaggtatactacagcatcaacctttgcgtagtaatccttccac 614
|| ||||| |||||||||||||| || |||||||| ||||| || |||||||| |||||
Sbjct: 421 ttgtcataagcatctaccaggtaaacaacagcatccaccttggcatagtaatctttccaa 362
Query: 615 acgcggcgcgcgatctggtggccgccgaggtcgaacgccttgaacttgatcttgccgatg 674
|| || || || ||||||||||| || | || || |||||||||||||| ||||| ||
Sbjct: 361 actcgacgggcaatctggtggccacccaaatcaaaagccttgaacttgattttgcctata 302
Query: 675 ctgagctcctccgacgtcgggtgctgcgtcggctggtgctgcaccaaccgctcgtccttg 734
|| | ||||| || || || | |||||| ||||| ||||||||||| | |||||| ||
Sbjct: 301 ctcaattcctctgatgttggatactgcgttggctgatgctgcaccaatctctcgtctttt 242
Query: 735 agcatgtggagcagcgtggtcttgcc 760
| |||||| |||| ||||| |||||
Sbjct: 241 aacatgtgaagcaatgtggttttgcc 216
>gb|DN502617.1|DN502617 X027F02.5pR Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA clone X027F02 5', mRNA sequence
Length = 635
Score = 139 bits (70), Expect = 2e-031
Identities = 274/342 (80%)
Strand = Plus / Minus
Query: 272 ctacttgatgtactgggagacccacttgaaaccatcaccgtagcccatcttgcgaacaac 331
||||||||| ||||| || | |||| | ||||| || || |||||||| ||||| ||||
Sbjct: 404 ctacttgatatactgagaaagccacctaaaaccctctccatagcccattttgcggacaat 345
Query: 332 actgcacatgaagacctcaagtggacggacattggagtcgccaaggttgaccttgccctt 391
|| |||||||| |||||||| ||||||||||| |||||| | | ||| ||||| |||||
Sbjct: 344 gctacacatgaatacctcaaggggacggacatttgagtcgaccaagttcaccttaccctt 285
Query: 392 cccggttgtgaagttgctaaggcctaggtgataccgtagctcctcttcagaggcagcata 451
|| || ||||||||| | || || |||| || || | ||| ||||| |||||||||||
Sbjct: 284 gccagtggtgaagttggtgagacccaggttgtaacgcaactcatcttctgaggcagcata 225
Query: 452 tgggatatcaatcttgttgccaaggatgagaaatggaacattggccaaagaatcatcaga 511
||||||||||||||||||||| | | ||||| || |||||||| || | ||||||||
Sbjct: 224 tgggatatcaatcttgttgcccaaaacaagaaaggggacattggctaatgcttcatcaga 165
Query: 512 caggagagcatcgagctccttctttgattcagcaaatcgctccttatcatatgcatctac 571
||||||||||| | || ||||| | || || |||| ||| || ||||| ||||||||
Sbjct: 164 gaggagagcatccaattctttcttggcctccgcgaatctctctttgtcataagcatctac 105
Query: 572 caggtatactacagcatcaacctttgcgtagtaatccttcca 613
|||||| | |||||||| ||||| || |||||||| |||||
Sbjct: 104 caggtaaataacagcatccaccttggcatagtaatctttcca 63
>gb|DN503774.1|DN503774 X018G08.5pR Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA clone X018G08 5', mRNA sequence
Length = 625
Score = 139 bits (70), Expect = 2e-031
Identities = 274/342 (80%)
Strand = Plus / Minus
Query: 272 ctacttgatgtactgggagacccacttgaaaccatcaccgtagcccatcttgcgaacaac 331
||||||||| ||||| || | |||| | ||||| || || |||||||| ||||| ||||
Sbjct: 411 ctacttgatatactgagaaagccacctaaaaccctctccatagcccattttgcggacaat 352
Query: 332 actgcacatgaagacctcaagtggacggacattggagtcgccaaggttgaccttgccctt 391
|| |||||||| |||||||| ||||||||||| |||||| | | ||| ||||| |||||
Sbjct: 351 gctacacatgaatacctcaaggggacggacatttgagtcgaccaagttcaccttaccctt 292
Query: 392 cccggttgtgaagttgctaaggcctaggtgataccgtagctcctcttcagaggcagcata 451
|| || ||||||||| | || || |||| || || | ||| ||||| |||||||||||
Sbjct: 291 gccagtggtgaagttggtgagacccaggttgtaacgcaactcatcttctgaggcagcata 232
Query: 452 tgggatatcaatcttgttgccaaggatgagaaatggaacattggccaaagaatcatcaga 511
||||||||||||||||||||| | | ||||| || |||||||| || | ||||||||
Sbjct: 231 tgggatatcaatcttgttgcccaaaacaagaaaggggacattggctaatgcttcatcaga 172
Query: 512 caggagagcatcgagctccttctttgattcagcaaatcgctccttatcatatgcatctac 571
||||||||||| | || ||||| | || || |||| ||| || ||||| ||||||||
Sbjct: 171 gaggagagcatccaattctttcttggcctccgcgaatctctctttgtcataagcatctac 112
Query: 572 caggtatactacagcatcaacctttgcgtagtaatccttcca 613
|||||| | |||||||| ||||| || |||||||| |||||
Sbjct: 111 caggtaaataacagcatccaccttggcatagtaatctttcca 70
>gb|DT489899.1|DT489899 WS02543.B21_H21 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02543_H21 3', mRNA sequence
Length = 842
Score = 139 bits (70), Expect = 2e-031
Identities = 274/342 (80%)
Strand = Plus / Plus
Query: 272 ctacttgatgtactgggagacccacttgaaaccatcaccgtagcccatcttgcgaacaac 331
||||||||| ||||| || | |||| | ||||| || || |||||||| ||||| ||||
Sbjct: 221 ctacttgatatactgagaaagccacctaaaaccctctccatagcccattttgcggacaat 280
Query: 332 actgcacatgaagacctcaagtggacggacattggagtcgccaaggttgaccttgccctt 391
|| |||||||| |||||||| ||||||||||| |||||| | | ||| ||||| |||||
Sbjct: 281 gctacacatgaatacctcaaggggacggacatttgagtcgaccaagttcaccttaccctt 340
Query: 392 cccggttgtgaagttgctaaggcctaggtgataccgtagctcctcttcagaggcagcata 451
|| || ||||||||| | || || |||| || || | ||| ||||| |||||||||||
Sbjct: 341 gccagtggtgaagttggtgagacccaggttgtaacgcaactcatcttccgaggcagcata 400
Query: 452 tgggatatcaatcttgttgccaaggatgagaaatggaacattggccaaagaatcatcaga 511
||||||||||||||||||||| | | ||||| || |||||||| || | ||||||||
Sbjct: 401 tgggatatcaatcttgttgcccaaaacaagaaaggggacattggctaatgcttcatcaga 460
Query: 512 caggagagcatcgagctccttctttgattcagcaaatcgctccttatcatatgcatctac 571
||||||||||| | || ||||| | || || |||| ||| || ||||| ||||||||
Sbjct: 461 gaggagagcatccaattctttcttggcctccgcgaatctctctttgtcataggcatctac 520
Query: 572 caggtatactacagcatcaacctttgcgtagtaatccttcca 613
|||||| | |||||||| ||||| || |||||||| |||||
Sbjct: 521 caggtaaataacagcatccaccttggcatagtaatctttcca 562
>gb|CF233198.1|CF233198 PtaJXO0020D9D0907 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 672
Score = 137 bits (69), Expect = 9e-031
Identities = 321/405 (79%)
Strand = Plus / Minus
Query: 272 ctacttgatgtactgggagacccacttgaaaccatcaccgtagcccatcttgcgaacaac 331
||||||||| ||||| || | |||| | ||||| || || |||||||| ||||| ||||
Sbjct: 578 ctacttgatatactgagaaagccacctaaaaccctctccatagcccattttgcggacaat 519
Query: 332 actgcacatgaagacctcaagtggacggacattggagtcgccaaggttgaccttgccctt 391
|| |||||||| |||||||| ||||||||||| |||||| | | ||| ||||| |||||
Sbjct: 518 gctacacatgaatacctcaaggggacggacatttgagtcgaccaagtttaccttaccctt 459
Query: 392 cccggttgtgaagttgctaaggcctaggtgataccgtagctcctcttcagaggcagcata 451
|| || ||||||||| | || || |||| || || | ||| ||||| |||||||||||
Sbjct: 458 gccagtggtgaagttggtgagacccaggttgtaacgcaactcatcttctgaggcagcata 399
Query: 452 tgggatatcaatcttgttgccaaggatgagaaatggaacattggccaaagaatcatcaga 511
||||||||||||||||||||| | | ||||| || |||||||| || | ||||||||
Sbjct: 398 tgggatatcaatcttgttgcccaaaacaagaaaggggacattggctaatgcttcatcaga 339
Query: 512 caggagagcatcgagctccttctttgattcagcaaatcgctccttatcatatgcatctac 571
||||||||||| | || ||||| | || || |||| ||| || ||||| ||||| ||
Sbjct: 338 gaggagagcatccaattctttcttggcctccgcgaatctctctttgtcataagcatccac 279
Query: 572 caggtatactacagcatcaacctttgcgtagtaatccttccacacgcggcgcgcgatctg 631
|||||| | |||||||| ||||| || |||||||| ||||| || || || || |||||
Sbjct: 278 caggtaaataacagcatccaccttggcatagtaatctttccaaactcgacgagcaatctg 219
Query: 632 gtggccgccgaggtcgaacgccttgaacttgatcttgccgatgct 676
|| || || | || || |||||||||||||| ||||| |||||
Sbjct: 218 atgtccacccaaatcaaaagccttgaacttgattttgccaatgct 174
>gb|AI166600.1|AI166600 xylem.est.416 Poplar xylem Lambda ZAPII library Populus trichocarpa
cDNA 5', mRNA sequence
Length = 561
Score = 133 bits (67), Expect = 1e-029
Identities = 256/319 (80%)
Strand = Plus / Minus
Query: 346 cctcaagtggacggacattggagtcgccaaggttgaccttgcccttcccggttgtgaagt 405
||||||| ||||||||||||||||| | || || ||||| ||||| || || ||||| |
Sbjct: 561 cctcaagaggacggacattggagtctaccagattcaccttccccttgccagtagtgaaat 502
Query: 406 tgctaaggcctaggtgataccgtagctcctcttcagaggcagcatatgggatatcaatct 465
|| | || || || ||| || ||||| ||||| || |||||||| || || |||||||
Sbjct: 501 tgttgagcccaagactataacggagctcatcttctgaagcagcatagggaatgtcaatct 442
Query: 466 tgttgccaaggatgagaaatggaacattggccaaagaatcatcagacaggagagcatcga 525
||||||| || || |||||||||||||| ||||| || ||||| || ||||| ||||| |
Sbjct: 441 tgttgcctagaatcagaaatggaacattagccaaggattcatctgataggagggcatcca 382
Query: 526 gctccttctttgattcagcaaatcgctccttatcatatgcatctaccaggtatactacag 585
| ||||||||||| || ||||| | |||||| ||| | ||||| || ||||| || || |
Sbjct: 381 gttccttctttgactcggcaaacctctccttgtcaaaggcatccactaggtaaaccacgg 322
Query: 586 catcaacctttgcgtagtaatccttccacacgcggcgcgcgatctggtggccgccgaggt 645
| || ||||| || |||||||| ||||| || || || ||||||||||||||||| | |
Sbjct: 321 cgtcgaccttagcatagtaatctttccaaacacgacgagcgatctggtggccgcccaaat 262
Query: 646 cgaacgccttgaacttgat 664
| || ||||||||||||||
Sbjct: 261 caaaagccttgaacttgat 243
>gb|BU875363.1|BU875363 V006A07 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 444
Score = 133 bits (67), Expect = 1e-029
Identities = 277/347 (79%)
Strand = Plus / Minus
Query: 459 tcaatcttgttgccaaggatgagaaatggaacattggccaaagaatcatcagacaggaga 518
|||||||||||||| | ||| |||||||||||||| ||||| || ||||| || |||||
Sbjct: 405 tcaatcttgttgcctaagatcagaaatggaacattagccaaggattcatctgaaaggagg 346
Query: 519 gcatcgagctccttctttgattcagcaaatcgctccttatcatatgcatctaccaggtat 578
||||| || ||||||||||| |||||||| | |||| ||||| ||||| || ||||||
Sbjct: 345 gcatccagttccttctttgactcagcaaacctaaccttgtcataggcatccactaggtat 286
Query: 579 actacagcatcaacctttgcgtagtaatccttccacacgcggcgcgcgatctggtggccg 638
|| || ||||| ||||| ||||||||||||||||| || || || ||||| ||||| ||
Sbjct: 285 accaccgcatccaccttggcgtagtaatccttccaaacacgacgggcgatttggtgacca 226
Query: 639 ccgaggtcgaacgccttgaacttgatcttgccgatgctgagctcctccgacgtcgggtgc 698
|| || || || |||||||||||||| || || || || | ||||| || || || |||
Sbjct: 225 cccagatcaaaagccttgaacttgatttttccaatactcaattcctctgatgttggatgc 166
Query: 699 tgcgtcggctggtgctgcaccaaccgctcgtccttgagcatgtggagcagcgtggtcttg 758
|| || || || ||||| ||||| | |||||| || | |||||| || || || ||||||
Sbjct: 165 tgggtgggttgatgctgtaccaatctctcgtcttttaacatgtgaagaagggttgtcttg 106
Query: 759 ccggcgttgtcgaggccaaggaagaggatcttggcctccttctgcca 805
|| || || || || || | ||| || |||||||||||||| |||||
Sbjct: 105 ccagcattatcaagacccaagaaaagaatcttggcctccttttgcca 59
>gb|CX660414.1|CX660414 PO01013B08 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01013B08 5', mRNA sequence
Length = 613
Score = 131 bits (66), Expect = 6e-029
Identities = 353/449 (78%)
Strand = Plus / Minus
Query: 312 tagcccatcttgcgaacaacactgcacatgaagacctcaagtggacggacattggagtcg 371
|||||||| ||||| |||| || |||||||| |||||||| ||||||||||| ||||||
Sbjct: 607 tagcccattttgcggacaatgctacacatgaatacctcaaggggacggacatttgagtcg 548
Query: 372 ccaaggttgaccttgcccttcccggttgtgaagttgctaaggcctaggtgataccgtagc 431
| | ||| ||||| ||||| || || ||||||||| | || | |||| || || | |
Sbjct: 547 accaagtttaccttacccttgccagtggtgaagttggtgagacncaggttgtaacgcaac 488
Query: 432 tcctcttcagaggcagcatatgggatatcaatcttgttgccaaggatgagaaatggaaca 491
|| ||||| |||||||||||||||||||||||||||||||| | | ||||| || |||
Sbjct: 487 tcatcttctgaggcagcatatgggatatcaatcttgttgcccaaaacaagaaaggggaca 428
Query: 492 ttggccaaagaatcatcagacaggagagcatcgagctccttctttgattcagcaaatcgc 551
||||| || | |||||||| ||||||||||| | || ||||| | || || |||| |
Sbjct: 427 ttggctaatgcttcatcagagaggagagcatccaattctttcttggcctccgcgaatctc 368
Query: 552 tccttatcatatgcatctaccaggtatactacagcatcaacctttgcgtagtaatccttc 611
|| || ||||| ||||| |||||||| | |||||||| ||||| || |||||||| |||
Sbjct: 367 tctttgtcataagcatccaccaggtaaataacagcatccaccttggcatagtaatctttc 308
Query: 612 cacacgcggcgcgcgatctggtggccgccgaggtcgaacgccttgaacttgatcttgccg 671
|| || || || || ||||| || || || | || || |||||||||||||| |||||
Sbjct: 307 caaactcgacgagcaatctgatgtccacccaaatcaaaagccttgaacttgattttgcca 248
Query: 672 atgctgagctcctccgacgtcgggtgctgcgtcggctggtgctgcaccaaccgctcgtcc 731
||||| | ||||| || || || | ||| || ||||| || |||||||| | |||||||
Sbjct: 247 atgctcaattcctcagatgttggatactgtgttggctgatgttgcaccaatctctcgtcc 188
Query: 732 ttgagcatgtggagcagcgtggtcttgcc 760
|| | |||||| |||| ||||| |||||
Sbjct: 187 tttaacatgtgaagcaaagtggttttgcc 159
>gb|DT510062.1|DT510062 WS02425.BR_H18 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02425_H18 5', mRNA sequence
Length = 764
Score = 131 bits (66), Expect = 6e-029
Identities = 273/342 (79%)
Strand = Plus / Minus
Query: 272 ctacttgatgtactgggagacccacttgaaaccatcaccgtagcccatcttgcgaacaac 331
||||||||| ||||| || | |||| | ||||| || || |||||||| ||||| ||||
Sbjct: 673 ctacttgatatactgagaaagccacctaaaaccctctccatagcccattttgcggacaat 614
Query: 332 actgcacatgaagacctcaagtggacggacattggagtcgccaaggttgaccttgccctt 391
|| |||||||| |||||||| ||||||||||| |||||| | | ||| ||||| |||||
Sbjct: 613 gctacacatgaatacctcaaggggacggacatttgagtcgaccaagttcaccttaccctt 554
Query: 392 cccggttgtgaagttgctaaggcctaggtgataccgtagctcctcttcagaggcagcata 451
|| || ||||||||| | || || |||| || || | ||| ||||| |||||||||||
Sbjct: 553 gccagtggtgaagttggtgagacccaggttgtaacgcaactcatcttccgaggcagcata 494
Query: 452 tgggatatcaatcttgttgccaaggatgagaaatggaacattggccaaagaatcatcaga 511
|||||||||||||||||||| | | ||||| || |||||||| || | ||||||||
Sbjct: 493 agggatatcaatcttgttgcccaaaacaagaaaggggacattggctaatgcttcatcaga 434
Query: 512 caggagagcatcgagctccttctttgattcagcaaatcgctccttatcatatgcatctac 571
||||||||||| | || ||||| | || || |||| ||| || ||||| ||||||||
Sbjct: 433 gaggagagcatccaattctttcttggcctccgcgaatctctctttgtcataggcatctac 374
Query: 572 caggtatactacagcatcaacctttgcgtagtaatccttcca 613
|||||| | |||||||| ||||| || |||||||| |||||
Sbjct: 373 caggtaaataacagcatccaccttggcatagtaatctttcca 332
>gb|DT514681.1|DT514681 WS02425.B21_H18 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02425_H18 3', mRNA sequence
Length = 858
Score = 131 bits (66), Expect = 6e-029
Identities = 273/342 (79%)
Strand = Plus / Plus
Query: 272 ctacttgatgtactgggagacccacttgaaaccatcaccgtagcccatcttgcgaacaac 331
||||||||| ||||| || | |||| | ||||| || || |||||||| ||||| ||||
Sbjct: 229 ctacttgatatactgagaaagccacctaaaaccctctccatagcccattttgcggacaat 288
Query: 332 actgcacatgaagacctcaagtggacggacattggagtcgccaaggttgaccttgccctt 391
|| |||||||| |||||||| ||||||||||| |||||| | | ||| ||||| |||||
Sbjct: 289 gctacacatgaatacctcaaggggacggacatttgagtcgaccaagttcaccttaccctt 348
Query: 392 cccggttgtgaagttgctaaggcctaggtgataccgtagctcctcttcagaggcagcata 451
|| || ||||||||| | || || |||| || || | ||| ||||| |||||||||||
Sbjct: 349 gccagtggtgaagttggtgagacccaggttgtaacgcaactcatcttccgaggcagcata 408
Query: 452 tgggatatcaatcttgttgccaaggatgagaaatggaacattggccaaagaatcatcaga 511
|||||||||||||||||||| | | ||||| || |||||||| || | ||||||||
Sbjct: 409 agggatatcaatcttgttgcccaaaacaagaaaggggacattggctaatgcttcatcaga 468
Query: 512 caggagagcatcgagctccttctttgattcagcaaatcgctccttatcatatgcatctac 571
||||||||||| | || ||||| | || || |||| ||| || ||||| ||||||||
Sbjct: 469 gaggagagcatccaattctttcttggcctccgcgaatctctctttgtcataggcatctac 528
Query: 572 caggtatactacagcatcaacctttgcgtagtaatccttcca 613
|||||| | |||||||| ||||| || |||||||| |||||
Sbjct: 529 caggtaaataacagcatccaccttggcatagtaatctttcca 570
>gb|CX172129.1|CX172129 E01_69-71_09.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 596
Score = 129 bits (65), Expect = 2e-028
Identities = 272/341 (79%)
Strand = Plus / Minus
Query: 435 tcttcagaggcagcatatgggatatcaatcttgttgccaaggatgagaaatggaacattg 494
||||| |||||||||| ||||||||||||||||||||| | | ||||| || ||||||
Sbjct: 522 tcttctgaggcagcatctgggatatcaatcttgttgcccaaaacaagaaaggggacattg 463
Query: 495 gccaaagaatcatcagacaggagagcatcgagctccttctttgattcagcaaatcgctcc 554
|| || | |||||||| ||||||||||| | || ||||| || || ||||||| |||
Sbjct: 462 gctaatgcttcatcagagaggagagcatccaattctttcttggactccgcaaatctctct 403
Query: 555 ttatcatatgcatctaccaggtatactacagcatcaacctttgcgtagtaatccttccac 614
|| ||||| |||||||||||||| || |||||||| ||||| || |||||||| |||||
Sbjct: 402 ttgtcataagcatctaccaggtaaacaacagcatccaccttggcatagtaatctttccaa 343
Query: 615 acgcggcgcgcgatctggtggccgccgaggtcgaacgccttgaacttgatcttgccgatg 674
|| || || || ||||| ||||| || | || || |||||||||||||| ||||| ||
Sbjct: 342 actcgacgggcaatctgatggccacccaaatcaaaagccttgaacttgattttgcctata 283
Query: 675 ctgagctcctccgacgtcgggtgctgcgtcggctggtgctgcaccaaccgctcgtccttg 734
|| | ||||| || || || | |||||| ||||| || |||||||| | |||||| ||
Sbjct: 282 ctcaattcctctgatgttggatactgcgttggctgatgttgcaccaatctctcgtctttt 223
Query: 735 agcatgtggagcagcgtggtcttgccggcgttgtcgaggcc 775
| |||||| |||| ||||| ||||| || || ||||||||
Sbjct: 222 aacatgtgaagcaatgtggttttgccagcattatcgaggcc 182
>gb|CX173825.1|CX173825 C03_69-85_05.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 617
Score = 129 bits (65), Expect = 2e-028
Identities = 272/341 (79%)
Strand = Plus / Minus
Query: 435 tcttcagaggcagcatatgggatatcaatcttgttgccaaggatgagaaatggaacattg 494
||||| |||||||||| ||||||||||||||||||||| | | ||||| || ||||||
Sbjct: 538 tcttctgaggcagcatctgggatatcaatcttgttgcccaaaacaagaaaggggacattg 479
Query: 495 gccaaagaatcatcagacaggagagcatcgagctccttctttgattcagcaaatcgctcc 554
|| || | |||||||| ||||||||||| | || ||||| || || ||||||| |||
Sbjct: 478 gctaatgcttcatcagagaggagagcatccaattctttcttggactccgcaaatctctct 419
Query: 555 ttatcatatgcatctaccaggtatactacagcatcaacctttgcgtagtaatccttccac 614
|| ||||| |||||||||||||| || |||||||| ||||| || |||||||| |||||
Sbjct: 418 ttgtcataagcatctaccaggtaaacaacagcatccaccttggcatagtaatctttccaa 359
Query: 615 acgcggcgcgcgatctggtggccgccgaggtcgaacgccttgaacttgatcttgccgatg 674
|| || || || ||||| ||||| || | || || |||||||||||||| ||||| ||
Sbjct: 358 actcgacgggcaatctgatggccacccaaatcaaaagccttgaacttgattttgcctata 299
Query: 675 ctgagctcctccgacgtcgggtgctgcgtcggctggtgctgcaccaaccgctcgtccttg 734
|| | ||||| || || || | |||||| ||||| || |||||||| | |||||| ||
Sbjct: 298 ctcaattcctctgatgttggatactgcgttggctgatgttgcaccaatctctcgtctttt 239
Query: 735 agcatgtggagcagcgtggtcttgccggcgttgtcgaggcc 775
| |||||| |||| ||||| ||||| || || ||||||||
Sbjct: 238 aacatgtgaagcaatgtggttttgccagcattatcgaggcc 198
>gb|CA821848.1|CA821848 RSH08D07 two-month-old roots from clone 'Beaupre' grown for 19 days
under restricted irrigation Populus trichocarpa x
Populus deltoides cDNA 5', mRNA sequence
Length = 572
Score = 127 bits (64), Expect = 9e-028
Identities = 193/236 (81%)
Strand = Plus / Minus
Query: 429 agctcctcttcagaggcagcatatgggatatcaatcttgttgccaaggatgagaaatgga 488
||||| ||||| || |||||||| || || |||||||||||||| || || |||||||||
Sbjct: 488 agctcatcttctgaagcagcatagggaatgtcaatcttgttgcctagaatcagaaatgga 429
Query: 489 acattggccaaagaatcatcagacaggagagcatcgagctccttctttgattcagcaaat 548
||||| ||||| || ||||| || ||||| ||||| || ||||||||||| || |||||
Sbjct: 428 acattagccaaggattcatctgataggagggcatccagttccttctttgactcggcaaac 369
Query: 549 cgctccttatcatatgcatctaccaggtatactacagcatcaacctttgcgtagtaatcc 608
| |||||| ||| | ||||| || ||||| || || || || ||||| || ||||||||
Sbjct: 368 ctctccttgtcaaaggcatccactaggtaaaccacggcgtcgaccttagcatagtaatct 309
Query: 609 ttccacacgcggcgcgcgatctggtggccgccgaggtcgaacgccttgaacttgat 664
||||| || || || ||||||||||||||||| | || || ||||||||||||||
Sbjct: 308 ttccaaacacgacgagcgatctggtggccgcccaaatcaaaagccttgaacttgat 253
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 119,124
Number of Sequences: 369679
Number of extensions: 119124
Number of successful extensions: 34995
Number of sequences better than 0.5: 91
Number of HSP's better than 0.5 without gapping: 88
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 34770
Number of HSP's gapped (non-prelim): 160
length of query: 1019
length of database: 203,408,664
effective HSP length: 19
effective length of query: 1000
effective length of database: 196,384,763
effective search space: 196384763000
effective search space used: 196384763000
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)