BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1805022.2.2
(1462 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CX182641.1|CX182641 F06_45-65_12.ab1 leaf inoculated wit... 170 1e-040
gb|DT487463.1|DT487463 WS02533.B21_M05 PT-MB-N-A-15 Populus... 163 2e-038
gb|DT492483.1|DT492483 WS02550.C21_N17 PT-MB-N-A-15 Populus... 163 2e-038
gb|BU881633.1|BU881633 UM65TD12 Populus flower cDNA library... 155 6e-036
gb|CK087295.1|CK087295 A002P32.3pR Hybrid aspen plasmid lib... 147 1e-033
gb|AJ771405.1|AJ771405 AJ771405 Populus euphratica leaf 3-6... 147 1e-033
gb|AJ780516.1|AJ780516 AJ780516 Populus euphratica leaf 3-6... 147 1e-033
gb|AJ780612.1|AJ780612 AJ780612 Populus euphratica leaf 3-6... 147 1e-033
gb|DT496142.1|DT496142 WS01122.BR_I14 PT-P-FL-A-2 Populus t... 145 6e-033
gb|BU882225.1|BU882225 UM74TC07 Populus flower cDNA library... 143 2e-032
gb|CK095319.1|CK095319 I078P77.3pR Populus senescing leaves... 143 2e-032
gb|CN524563.1|CN524563 GQ015M13.T3_H06 GQ015 Populus tricho... 143 2e-032
gb|CV277967.1|CV277967 WS0145.B21_B02 PTxD-IL-A-5 Populus t... 143 2e-032
gb|BI126453.1|BI126453 I075P73P Populus leaf cDNA library P... 141 9e-032
gb|CK098040.1|CK098040 A002P32.5pR Hybrid aspen plasmid lib... 139 3e-031
gb|AJ771467.1|AJ771467 AJ771467 Populus euphratica root 3-6... 139 3e-031
gb|DT486568.1|DT486568 WS02531.B21_F14 PT-MB-N-A-15 Populus... 139 3e-031
gb|DT515101.1|DT515101 WS02426.B21_K11 PTxD-ICC-N-A-14 Popu... 139 3e-031
gb|CV248956.1|CV248956 WS01122.B21_I14 PT-P-FL-A-2 Populus ... 135 5e-030
gb|BU894569.1|BU894569 X011D10 Populus wood cDNA library Po... 133 2e-029
gb|BI126678.1|BI126678 I078P77P Populus leaf cDNA library P... 129 3e-028
gb|CN523692.1|CN523692 GQ015M12.T3_G04 GQ015 Populus tricho... 129 3e-028
gb|AJ771190.1|AJ771190 AJ771190 Populus euphratica leaf 3-6... 129 3e-028
gb|DT482057.1|DT482057 WS02533.BR_M05 PT-MB-N-A-15 Populus ... 123 2e-026
gb|DT510474.1|DT510474 WS02426.BR_K11 PTxD-ICC-N-A-14 Popul... 123 2e-026
gb|DV466136.1|DV466136 MTUNUL1.P47.G04 NUL Populus fremonti... 123 2e-026
gb|DV466348.1|DV466348 MTUNUL1.P5.D11 NUL Populus fremontii... 123 2e-026
gb|AJ771130.1|AJ771130 AJ771130 Populus euphratica leaf 3-6... 121 8e-026
gb|BU883697.1|BU883697 UM98TB11 Populus flower cDNA library... 109 3e-022
gb|CV264362.1|CV264362 WS02024.B21_F05 PTxN-IB-N-A-11 Popul... 109 3e-022
gb|CV271420.1|CV271420 WS0154.B21_K13 PTxN-IB-A-6 Populus t... 109 3e-022
gb|AI165363.1|AI165363 A082p26u Hybrid aspen plasmid librar... 84 2e-014
gb|BU890887.1|BU890887 P043A09 Populus petioles cDNA librar... 84 2e-014
gb|AJ771214.1|AJ771214 AJ771214 Populus euphratica leaf 3-6... 84 2e-014
gb|AJ780435.1|AJ780435 AJ780435 Populus euphratica leaf 3-6... 70 3e-010
gb|CV255534.1|CV255534 WS02414.B21_E16 PTxD-ICC-N-A-14 Popu... 66 4e-009
gb|BI124815.1|BI124815 I051P35P Populus leaf cDNA library P... 64 2e-008
gb|CX183126.1|CX183126 C01_45-57_05.ab1 leaf inoculated wit... 62 6e-008
gb|CK105244.1|CK105244 I078P77.5pR Populus senescing leaves... 60 3e-007
gb|BU811307.1|BU811307 UL82TE12 Populus leaf cDNA library P... 54 2e-005
gb|AI161542.1|AI161542 A002P32U Hybrid aspen plasmid librar... 48 0.001
gb|BU822623.1|BU822623 UB40BPB06 Populus tremula cambium cD... 46 0.004
gb|CV257166.1|CV257166 WS0245.B21_N20 PTxD-ICC-N-A-14 Popul... 44 0.015
gb|BI072427.1|BI072427 C075P61U Populus strain T89 leaves P... 40 0.23
gb|BI122421.1|BI122421 I006P50P Populus leaf cDNA library P... 40 0.23
gb|CF233474.1|CF233474 PtaJXO0024A6A0602 Poplar cDNA librar... 40 0.23
>gb|CX182641.1|CX182641 F06_45-65_12.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 601
Score = 170 bits (86), Expect = 1e-040
Identities = 284/350 (81%)
Strand = Plus / Plus
Query: 824 gttgtgaaagaagaactctttggtcctgtcctttatgttatgaaatttcagaccttgaag 883
||||| ||||||||| | |||| |||||| ||||||||||||||||||||||| || |
Sbjct: 81 gttgttaaagaagaattatttgctcctgttctttatgttatgaaatttcagactttacaa 140
Query: 884 gaagcaattgaaatcaataactctgttcctcaaggattgagcagttctatatttacaaag 943
|||||||||||||| || || || ||||| |||||||| || |||||||| || ||
Sbjct: 141 gaagcaattgaaataaacaattcagttccccaaggattaagtagttctatcttcacccgc 200
Query: 944 aggccagatattatttttaagtggctcgggccccatggtagtgattgtggtatagtgaat 1003
| ||| || ||||| || |||||| | ||||| | || ||||||||||| || ||||||
Sbjct: 201 aagcctgaaattatcttcaagtggattgggccactaggaagtgattgtggaattgtgaat 260
Query: 1004 gtgaacatacctactaatggtgctgaaattggtggagcatttggtggagaaaaagcaact 1063
|| || ||||| || |||||||||||||||||||| || |||||||| ||||| || ||
Sbjct: 261 gtaaatataccaaccaatggtgctgaaattggtggtgcttttggtggcgaaaaggctaca 320
Query: 1064 ggtggtggacgagaagcagggagtgattcctggaagcagtacatgaggagggcgacttgt 1123
|| ||||| || ||||||||||||||||| |||||||| || ||| | | | ||||||
Sbjct: 321 gggggtggccgtgaagcagggagtgattcttggaagcaatatatgcgacgctcaacttgt 380
Query: 1124 acaatcaactatgggagcgagctacctctagcccagggaatcaattttgg 1173
|||||||| || || | |||||||| || || || ||||||||||||||
Sbjct: 381 acaatcaattacggtaatgagctaccactggcacaaggaatcaattttgg 430
>gb|DT487463.1|DT487463 WS02533.B21_M05 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02533_M05 3', mRNA sequence
Length = 933
Score = 163 bits (82), Expect = 2e-038
Identities = 283/350 (80%)
Strand = Plus / Minus
Query: 824 gttgtgaaagaagaactctttggtcctgtcctttatgttatgaaatttcagaccttgaag 883
||||| ||||||||| | |||| |||||| ||||||||||||||||||||||| || |
Sbjct: 758 gttgttaaagaagaattatttgctcctgttctttatgttatgaaatttcagactttacaa 699
Query: 884 gaagcaattgaaatcaataactctgttcctcaaggattgagcagttctatatttacaaag 943
|||||||||||||| || || || ||||| |||||||| || |||||||| || ||
Sbjct: 698 gaagcaattgaaataaacaattcagttccccaaggattaagtagttctatcttcacccgc 639
Query: 944 aggccagatattatttttaagtggctcgggccccatggtagtgattgtggtatagtgaat 1003
| || || ||||| || |||||| | ||||| | || ||||||||||| || ||||||
Sbjct: 638 aaacctgaaattatcttcaagtggattgggccactaggaagtgattgtggaattgtgaat 579
Query: 1004 gtgaacatacctactaatggtgctgaaattggtggagcatttggtggagaaaaagcaact 1063
|| || ||||| || |||||||||||||||||||| || |||||||| ||||| || ||
Sbjct: 578 gtaaatataccaaccaatggtgctgaaattggtggtgcttttggtggcgaaaaggctaca 519
Query: 1064 ggtggtggacgagaagcagggagtgattcctggaagcagtacatgaggagggcgacttgt 1123
|| ||||| || ||||||||||||||||| |||||||| || ||| | | | ||||||
Sbjct: 518 gggggtggccgtgaagcagggagtgattcttggaagcaatatatgcgacgctcaacttgt 459
Query: 1124 acaatcaactatgggagcgagctacctctagcccagggaatcaattttgg 1173
|||||||| || || | |||||||| || || || ||||||||||||||
Sbjct: 458 acaatcaattacggtaatgagctaccactggcacaaggaatcaattttgg 409
>gb|DT492483.1|DT492483 WS02550.C21_N17 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02550_N17 3', mRNA sequence
Length = 854
Score = 163 bits (82), Expect = 2e-038
Identities = 283/350 (80%)
Strand = Plus / Minus
Query: 824 gttgtgaaagaagaactctttggtcctgtcctttatgttatgaaatttcagaccttgaag 883
||||| ||||||||| | |||| |||||| ||||||||||||||||||||||| || |
Sbjct: 585 gttgttaaagaagaattatttgctcctgttctttatgttatgaaatttcagactttacaa 526
Query: 884 gaagcaattgaaatcaataactctgttcctcaaggattgagcagttctatatttacaaag 943
|||||||||||||| || || || ||||| |||||||| || |||||||| || ||
Sbjct: 525 gaagcaattgaaataaacaattcagttccccaaggattaagtagttctatcttcacccgc 466
Query: 944 aggccagatattatttttaagtggctcgggccccatggtagtgattgtggtatagtgaat 1003
| || || ||||| || |||||| | ||||| | || ||||||||||| || ||||||
Sbjct: 465 aaacctgaaattatcttcaagtggattgggccactaggaagtgattgtggaattgtgaat 406
Query: 1004 gtgaacatacctactaatggtgctgaaattggtggagcatttggtggagaaaaagcaact 1063
|| || ||||| || |||||||||||||||||||| || |||||| ||||||| || ||
Sbjct: 405 gtaaatataccaaccaatggtgctgaaattggtggtgcttttggtagagaaaaggctaca 346
Query: 1064 ggtggtggacgagaagcagggagtgattcctggaagcagtacatgaggagggcgacttgt 1123
|| ||||| || ||||||||||||||||| |||||||| || ||| | | | ||||||
Sbjct: 345 gggggtggccgtgaagcagggagtgattcttggaagcaatatatgcgacgctcaacttgt 286
Query: 1124 acaatcaactatgggagcgagctacctctagcccagggaatcaattttgg 1173
|||||||| || || | |||||||| || || || ||||||||||||||
Sbjct: 285 acaatcaattacggtaatgagctaccactggcacaaggaatcaattttgg 236
>gb|BU881633.1|BU881633 UM65TD12 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 547
Score = 155 bits (78), Expect = 6e-036
Identities = 228/278 (82%)
Strand = Plus / Plus
Query: 824 gttgtgaaagaagaactctttggtcctgtcctttatgttatgaaatttcagaccttgaag 883
||||| ||||||||| | |||| |||||| ||||||||||||||||||||||| || |
Sbjct: 253 gttgttaaagaagaattatttgctcctgttctttatgttatgaaatttcagactttacaa 312
Query: 884 gaagcaattgaaatcaataactctgttcctcaaggattgagcagttctatatttacaaag 943
|||||||||||||| || || || ||||| |||||||| || |||||||| || ||
Sbjct: 313 gaagcaattgaaataaacaattcagttccccaaggattaagtagttctatcttcacccgc 372
Query: 944 aggccagatattatttttaagtggctcgggccccatggtagtgattgtggtatagtgaat 1003
| || || ||||| || |||||| | ||||| | || ||||||||||| || ||||||
Sbjct: 373 aaacctgaaattatcttcaagtggattgggccactaggaagtgattgtggaattgtgaat 432
Query: 1004 gtgaacatacctactaatggtgctgaaattggtggagcatttggtggagaaaaagcaact 1063
|| || ||||| || |||||||||||||||||||| || |||||||| ||||| || ||
Sbjct: 433 gtaaatataccaaccaatggtgctgaaattggtggtgcttttggtggcgaaaaggctaca 492
Query: 1064 ggtggtggacgagaagcagggagtgattcctggaagca 1101
|| ||||| || ||||||||||||||||| ||||||||
Sbjct: 493 gggggtggccgtgaagcagggagtgattcttggaagca 530
>gb|CK087295.1|CK087295 A002P32.3pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A002P32 3', mRNA sequence
Length = 863
Score = 147 bits (74), Expect = 1e-033
Identities = 282/350 (80%), Gaps = 1/350 (0%)
Strand = Plus / Minus
Query: 824 gttgtgaaagaagaactctttggtcctgtcctttatgttatgaaatttcagaccttgaag 883
||||| ||||||||| | |||| |||||| ||||||||||||||||||||||| || |
Sbjct: 636 gttgttaaagaagaattatttgctcctgttctttatgttatgaaatttcagactttacaa 577
Query: 884 gaagcaattgaaatcaataactctgttcctcaaggattgagcagttctatatttacaaag 943
|||||||||||||| || || || ||||| |||||| | || |||||||| || ||
Sbjct: 576 gaagcaattgaaat-aacaattcagttccccaaggactaagtagttctatcttcactcgc 518
Query: 944 aggccagatattatttttaagtggctcgggccccatggtagtgattgtggtatagtgaat 1003
| || || ||||| || |||||| | ||||| | || ||||||||||| || ||||||
Sbjct: 517 aaacctgaaattatcttcaagtggattgggccactaggaagtgattgtggaattgtgaat 458
Query: 1004 gtgaacatacctactaatggtgctgaaattggtggagcatttggtggagaaaaagcaact 1063
|| || ||||| || |||||||||||||||||||| || |||||||| ||||| || ||
Sbjct: 457 gtaaatataccaaccaatggtgctgaaattggtggtgcttttggtggcgaaaaggctaca 398
Query: 1064 ggtggtggacgagaagcagggagtgattcctggaagcagtacatgaggagggcgacttgt 1123
|| ||||| || ||||||||||||||||| |||||||| || ||| | | | ||||||
Sbjct: 397 gggggtggccgtgaagcagggagtgattcttggaagcaatatatgcgacgctcaacttgt 338
Query: 1124 acaatcaactatgggagcgagctacctctagcccagggaatcaattttgg 1173
|||||||| || || | |||||||| || || || ||||||||||||||
Sbjct: 337 acaatcaattacggtaatgagctaccactggcacaaggaatcaattttgg 288
>gb|AJ771405.1|AJ771405 AJ771405 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0001500006F04F1, mRNA sequence
Length = 526
Score = 147 bits (74), Expect = 1e-033
Identities = 227/278 (81%)
Strand = Plus / Minus
Query: 824 gttgtgaaagaagaactctttggtcctgtcctttatgttatgaaatttcagaccttgaag 883
||||| ||||||||| | |||| |||||| ||||| ||||||||||||||||| || |
Sbjct: 300 gttgttaaagaagaattatttgctcctgttctttacgttatgaaatttcagactttacaa 241
Query: 884 gaagcaattgaaatcaataactctgttcctcaaggattgagcagttctatatttacaaag 943
|||||||||||||| || || || ||||| |||||||| || |||||||| || ||
Sbjct: 240 gaagcaattgaaataaacaattcagttccccaaggattaagtagttctatcttcacccgc 181
Query: 944 aggccagatattatttttaagtggctcgggccccatggtagtgattgtggtatagtgaat 1003
| || || ||||| || |||||| | ||||| | || ||||||||||| || ||||||
Sbjct: 180 aaacctgaaattatcttcaagtggattgggccactaggaagtgattgtggaattgtgaat 121
Query: 1004 gtgaacatacctactaatggtgctgaaattggtggagcatttggtggagaaaaagcaact 1063
|| || ||||| || |||||||||||||||||||| || |||||||| ||||| || ||
Sbjct: 120 gtaaatataccaaccaatggtgctgaaattggtggtgcttttggtggtgaaaaggctaca 61
Query: 1064 ggtggtggacgagaagcagggagtgattcctggaagca 1101
|| ||||| || ||||||||||||||||| ||||||||
Sbjct: 60 gggggtggccgggaagcagggagtgattcttggaagca 23
>gb|AJ780516.1|AJ780516 AJ780516 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0000900009B05F1, mRNA sequence
Length = 517
Score = 147 bits (74), Expect = 1e-033
Identities = 227/278 (81%)
Strand = Plus / Minus
Query: 824 gttgtgaaagaagaactctttggtcctgtcctttatgttatgaaatttcagaccttgaag 883
||||| ||||||||| | |||| |||||| ||||| ||||||||||||||||| || |
Sbjct: 300 gttgttaaagaagaattatttgctcctgttctttacgttatgaaatttcagactttacaa 241
Query: 884 gaagcaattgaaatcaataactctgttcctcaaggattgagcagttctatatttacaaag 943
|||||||||||||| || || || ||||| |||||||| || |||||||| || ||
Sbjct: 240 gaagcaattgaaataaacaattcagttccccaaggattaagtagttctatcttcacccgc 181
Query: 944 aggccagatattatttttaagtggctcgggccccatggtagtgattgtggtatagtgaat 1003
| || || ||||| || |||||| | ||||| | || ||||||||||| || ||||||
Sbjct: 180 aaacctgaaattatcttcaagtggattgggccactaggaagtgattgtggaattgtgaat 121
Query: 1004 gtgaacatacctactaatggtgctgaaattggtggagcatttggtggagaaaaagcaact 1063
|| || ||||| || |||||||||||||||||||| || |||||||| ||||| || ||
Sbjct: 120 gtaaatataccaaccaatggtgctgaaattggtggtgcttttggtggtgaaaaggctaca 61
Query: 1064 ggtggtggacgagaagcagggagtgattcctggaagca 1101
|| ||||| || ||||||||||||||||| ||||||||
Sbjct: 60 gggggtggccgggaagcagggagtgattcttggaagca 23
>gb|AJ780612.1|AJ780612 AJ780612 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0000900010C10F1, mRNA sequence
Length = 461
Score = 147 bits (74), Expect = 1e-033
Identities = 227/278 (81%)
Strand = Plus / Minus
Query: 824 gttgtgaaagaagaactctttggtcctgtcctttatgttatgaaatttcagaccttgaag 883
||||| ||||||||| | |||| |||||| ||||| ||||||||||||||||| || |
Sbjct: 300 gttgttaaagaagaattatttgctcctgttctttacgttatgaaatttcagactttacaa 241
Query: 884 gaagcaattgaaatcaataactctgttcctcaaggattgagcagttctatatttacaaag 943
|||||||||||||| || || || ||||| |||||||| || |||||||| || ||
Sbjct: 240 gaagcaattgaaataaacaattcagttccccaaggattaagtagttctatcttcacccgc 181
Query: 944 aggccagatattatttttaagtggctcgggccccatggtagtgattgtggtatagtgaat 1003
| || || ||||| || |||||| | ||||| | || ||||||||||| || ||||||
Sbjct: 180 aaacctgaaattatcttcaagtggattgggccactaggaagtgattgtggaattgtgaat 121
Query: 1004 gtgaacatacctactaatggtgctgaaattggtggagcatttggtggagaaaaagcaact 1063
|| || ||||| || |||||||||||||||||||| || |||||||| ||||| || ||
Sbjct: 120 gtaaatataccaaccaatggtgctgaaattggtggtgcttttggtggtgaaaaggctaca 61
Query: 1064 ggtggtggacgagaagcagggagtgattcctggaagca 1101
|| ||||| || ||||||||||||||||| ||||||||
Sbjct: 60 gggggtggccgggaagcagggagtgattcttggaagca 23
>gb|DT496142.1|DT496142 WS01122.BR_I14 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01122_I14 5', mRNA sequence
Length = 844
Score = 145 bits (73), Expect = 6e-033
Identities = 202/245 (82%)
Strand = Plus / Plus
Query: 96 tggaggtgtggaatccccttggagttgtgggtgttataacggcatttaatttcccttgtg 155
||||| |||||||||| |||||| | || ||||| || || || || || ||||| || |
Sbjct: 549 tggagatgtggaatcctcttggaatcgttggtgtgattacagctttcaacttcccatgcg 608
Query: 156 ctgtgcttggttggaatgcttgcattgctttggtctgtggaaattgtgtcgtctggaaag 215
|||| ||||| ||||||||||||||||| | |||||||| |||||||| ||||||||||
Sbjct: 609 ctgttcttggatggaatgcttgcattgcactagtctgtggcaattgtgttgtctggaaag 668
Query: 216 gtgctccaacaactccactgatcactattgcaatgacaaaaatagtggctagtgtattgg 275
|||| || |||||||| |||| || ||||||||||||| |||| ||| | || || |
Sbjct: 669 gtgcaccgacaactcctttgattaccattgcaatgacaaggctagtagctggggtgttag 728
Query: 276 agaagaacaacttgccaggcgcaatttttacatctttttgtgggggcactgaaattggtc 335
||||||| |||||||| ||||||||||||||||||||||| || |||| |||||||
Sbjct: 729 agaagaataacttgcctcctgcaatttttacatctttttgtggtggtgctgatattggtc 788
Query: 336 aagca 340
|||||
Sbjct: 789 aagca 793
>gb|BU882225.1|BU882225 UM74TC07 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 583
Score = 143 bits (72), Expect = 2e-032
Identities = 177/212 (83%)
Strand = Plus / Plus
Query: 962 aagtggctcgggccccatggtagtgattgtggtatagtgaatgtgaacatacctactaat 1021
|||||| | ||||| || || |||||||||||||| |||||||| || ||||| || |||
Sbjct: 247 aagtggattgggcctcaaggaagtgattgtggtattgtgaatgtaaatataccaacgaat 306
Query: 1022 ggtgctgaaattggtggagcatttggtggagaaaaagcaactggtggtggacgagaagca 1081
||||||||||||||||| || |||||||||||||| || || || ||||| || ||||||
Sbjct: 307 ggtgctgaaattggtggtgcttttggtggagaaaaggctacagggggtggccgtgaagca 366
Query: 1082 gggagtgattcctggaagcagtacatgaggagggcgacttgtacaatcaactatgggagc 1141
|| |||||||| |||||||| |||||||| | | |||||||| ||||| |||||||
Sbjct: 367 ggaagtgattcttggaagcaatacatgagacgctcaacttgtacgatcaattatgggaat 426
Query: 1142 gagctacctctagcccagggaatcaattttgg 1173
||| |||| || || || ||||||||||||||
Sbjct: 427 gagttaccactggcacaaggaatcaattttgg 458
Score = 83.8 bits (42), Expect = 2e-014
Identities = 93/110 (84%)
Strand = Plus / Plus
Query: 824 gttgtgaaagaagaactctttggtcctgtcctttatgttatgaaatttcagaccttgaag 883
||||| |||||||| | |||| |||||| ||||| ||||||||||||||||| || |
Sbjct: 109 gttgttaaagaagagttatttgctcctgttctttacgttatgaaatttcagactttacaa 168
Query: 884 gaagcaattgaaatcaataactctgttcctcaaggattgagcagttctat 933
|||||||||||||| || || || |||||||||||||| || ||||||||
Sbjct: 169 gaagcaattgaaataaacaattcagttcctcaaggattaagtagttctat 218
>gb|CK095319.1|CK095319 I078P77.3pR Populus senescing leaves cDNA library Populus tremula
cDNA clone I078P77 3', mRNA sequence
Length = 689
Score = 143 bits (72), Expect = 2e-032
Identities = 177/212 (83%)
Strand = Plus / Minus
Query: 962 aagtggctcgggccccatggtagtgattgtggtatagtgaatgtgaacatacctactaat 1021
|||||| | ||||| || || |||||||||||||| |||||||| || ||||| || |||
Sbjct: 527 aagtggattgggcctcaaggaagtgattgtggtattgtgaatgtaaatataccaacaaat 468
Query: 1022 ggtgctgaaattggtggagcatttggtggagaaaaagcaactggtggtggacgagaagca 1081
||||||||||||||||| || |||||||||||||| || || || ||||| || ||||||
Sbjct: 467 ggtgctgaaattggtggtgcttttggtggagaaaaggctacagggggtggccgtgaagca 408
Query: 1082 gggagtgattcctggaagcagtacatgaggagggcgacttgtacaatcaactatgggagc 1141
|| |||||||| |||||||| |||||||| | | |||||||| ||||| |||||||
Sbjct: 407 ggaagtgattcttggaagcaatacatgagacgctcaacttgtacgatcaattatgggaat 348
Query: 1142 gagctacctctagcccagggaatcaattttgg 1173
||| |||| || || || ||||||||||||||
Sbjct: 347 gagttaccactggcacaaggaatcaattttgg 316
Score = 67.9 bits (34), Expect = 1e-009
Identities = 81/94 (86%), Gaps = 2/94 (2%)
Strand = Plus / Minus
Query: 842 tttggtcctgtcctttatgttatgaaatttcagaccttga-aggaagcaattga-aatca 899
|||| |||||| ||||| |||||||||||||||||||| | | ||||||||||| ||| |
Sbjct: 649 tttgctcctgttctttacgttatgaaatttcagacctttacaagaagcaattgagaataa 590
Query: 900 ataactctgttcctcaaggattgagcagttctat 933
| || || |||||||||||||| || ||||||||
Sbjct: 589 acaattcagttcctcaaggattaagtagttctat 556
>gb|CN524563.1|CN524563 GQ015M13.T3_H06 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M13_H06 5', mRNA sequence
Length = 846
Score = 143 bits (72), Expect = 2e-032
Identities = 177/212 (83%)
Strand = Plus / Plus
Query: 962 aagtggctcgggccccatggtagtgattgtggtatagtgaatgtgaacatacctactaat 1021
|||||| | ||||| || || |||||||||||||| |||||||| || ||||| || |||
Sbjct: 360 aagtggattgggcctcaaggaagtgattgtggtattgtgaatgtaaatataccaacaaat 419
Query: 1022 ggtgctgaaattggtggagcatttggtggagaaaaagcaactggtggtggacgagaagca 1081
||||||||||||||||| || |||||||||||||| || || || ||||| || ||||||
Sbjct: 420 ggtgctgaaattggtggtgcttttggtggagaaaaggctacagggggtggccgtgaagca 479
Query: 1082 gggagtgattcctggaagcagtacatgaggagggcgacttgtacaatcaactatgggagc 1141
|| |||||||| |||||||| |||||||| | | |||||||| ||||| |||||||
Sbjct: 480 ggaagtgattcttggaagcaatacatgagacgctcaacttgtacgatcaattatgggaat 539
Query: 1142 gagctacctctagcccagggaatcaattttgg 1173
||| |||| || || || ||||||||||||||
Sbjct: 540 gagttaccactggcacaaggaatcaattttgg 571
Score = 91.7 bits (46), Expect = 7e-017
Identities = 94/110 (85%)
Strand = Plus / Plus
Query: 824 gttgtgaaagaagaactctttggtcctgtcctttatgttatgaaatttcagaccttgaag 883
||||| |||||||| | |||| |||||| ||||||||||||||||||||||| || |
Sbjct: 222 gttgttaaagaagagttatttgctcctgttctttatgttatgaaatttcagactttacaa 281
Query: 884 gaagcaattgaaatcaataactctgttcctcaaggattgagcagttctat 933
|||||||||||||| || || || |||||||||||||| || ||||||||
Sbjct: 282 gaagcaattgaaataaacaattcagttcctcaaggattaagtagttctat 331
Score = 50.1 bits (25), Expect = 2e-004
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 634 aattggggatccgttggagaaaggcaccttactgggaccactgca 678
|||||||||||| ||||| ||||||||||| || || ||||||||
Sbjct: 32 aattggggatccattggaaaaaggcaccttgctcgggccactgca 76
>gb|CV277967.1|CV277967 WS0145.B21_B02 PTxD-IL-A-5 Populus trichocarpa x Populus deltoides
cDNA clone WS0145_B02 3', mRNA sequence
Length = 856
Score = 143 bits (72), Expect = 2e-032
Identities = 177/212 (83%)
Strand = Plus / Minus
Query: 962 aagtggctcgggccccatggtagtgattgtggtatagtgaatgtgaacatacctactaat 1021
|||||| | ||||| || || |||||||||||||| |||||||| || ||||| || |||
Sbjct: 667 aagtggattgggcctcaaggaagtgattgtggtattgtgaatgtaaatataccaacgaat 608
Query: 1022 ggtgctgaaattggtggagcatttggtggagaaaaagcaactggtggtggacgagaagca 1081
||||||||||||||||| || |||||||||||||| || || || ||||| || ||||||
Sbjct: 607 ggtgctgaaattggtggtgcttttggtggagaaaaggctacagggggtggccgtgaagca 548
Query: 1082 gggagtgattcctggaagcagtacatgaggagggcgacttgtacaatcaactatgggagc 1141
|| |||||||| |||||||| |||||||| | | |||||||| ||||| |||||||
Sbjct: 547 ggaagtgattcttggaagcaatacatgagacgctcaacttgtacgatcaattatgggaat 488
Query: 1142 gagctacctctagcccagggaatcaattttgg 1173
||| |||| || || || ||||||||||||||
Sbjct: 487 gagttaccactggcacaaggaatcaattttgg 456
Score = 83.8 bits (42), Expect = 2e-014
Identities = 93/110 (84%)
Strand = Plus / Minus
Query: 824 gttgtgaaagaagaactctttggtcctgtcctttatgttatgaaatttcagaccttgaag 883
||||| |||||||| | |||| |||||| ||||| ||||||||||||||||| || |
Sbjct: 805 gttgttaaagaagagttatttgctcctgttctttacgttatgaaatttcagactttacaa 746
Query: 884 gaagcaattgaaatcaataactctgttcctcaaggattgagcagttctat 933
|||||||||||||| || || || |||||||||||||| || ||||||||
Sbjct: 745 gaagcaattgaaataaacaattcagttcctcaaggattaagtagttctat 696
>gb|BI126453.1|BI126453 I075P73P Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 560
Score = 141 bits (71), Expect = 9e-032
Identities = 161/191 (84%)
Strand = Plus / Plus
Query: 983 agtgattgtggtatagtgaatgtgaacatacctactaatggtgctgaaattggtggagca 1042
|||||||||||||| |||||||| || ||||| || |||||||||||||||||||| ||
Sbjct: 43 agtgattgtggtattgtgaatgtaaatataccaacaaatggtgctgaaattggtggtgct 102
Query: 1043 tttggtggagaaaaagcaactggtggtggacgagaagcagggagtgattcctggaagcag 1102
|||||||||||||| || || || ||||| || |||||||| |||||||| ||||||||
Sbjct: 103 tttggtggagaaaaggctacagggggtggccgtgaagcaggaagtgattcttggaagcaa 162
Query: 1103 tacatgaggagggcgacttgtacaatcaactatgggagcgagctacctctagcccaggga 1162
|||||||| | | |||||||| ||||| ||||||| ||| |||| || || || |||
Sbjct: 163 tacatgagacgctcaacttgtacgatcaattatgggaatgagttaccactggcacaagga 222
Query: 1163 atcaattttgg 1173
|||||||||||
Sbjct: 223 atcaattttgg 233
>gb|CK098040.1|CK098040 A002P32.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A002P32 5', mRNA sequence
Length = 766
Score = 139 bits (70), Expect = 3e-031
Identities = 226/278 (81%)
Strand = Plus / Plus
Query: 824 gttgtgaaagaagaactctttggtcctgtcctttatgttatgaaatttcagaccttgaag 883
||||| ||||||||| | |||| |||||| ||||||||||||||||||||||| || |
Sbjct: 221 gttgttaaagaagaattatttgctcctgttctttatgttatgaaatttcagactttacaa 280
Query: 884 gaagcaattgaaatcaataactctgttcctcaaggattgagcagttctatatttacaaag 943
|||||||||||||| || || || ||||| |||||| | || |||||||| || ||
Sbjct: 281 gaagcaattgaaataaacaattcagttccccaaggactaagtagttctatcttcactcgc 340
Query: 944 aggccagatattatttttaagtggctcgggccccatggtagtgattgtggtatagtgaat 1003
| || || ||||| || |||||| | ||||| | || ||||||||||| || ||||||
Sbjct: 341 aaacctgaaattatcttcaagtggattgggccactaggaagtgattgtggaattgtgaat 400
Query: 1004 gtgaacatacctactaatggtgctgaaattggtggagcatttggtggagaaaaagcaact 1063
|| || ||||| || |||||||||||||||||||| | |||||||| ||||| || ||
Sbjct: 401 gtaaatataccaaccaatggtgctgaaattggtggtgtttttggtggcgaaaaggctaca 460
Query: 1064 ggtggtggacgagaagcagggagtgattcctggaagca 1101
|| ||||| || ||||||||||||||||| ||||||||
Sbjct: 461 gggggtggccgtgaagcagggagtgattcttggaagca 498
>gb|AJ771467.1|AJ771467 AJ771467 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0001600001F03F1, mRNA sequence
Length = 385
Score = 139 bits (70), Expect = 3e-031
Identities = 226/278 (81%)
Strand = Plus / Plus
Query: 824 gttgtgaaagaagaactctttggtcctgtcctttatgttatgaaatttcagaccttgaag 883
||||| ||||||||| | ||| |||||| ||||| ||||||||||||||||| || |
Sbjct: 86 gttgttaaagaagaattatttactcctgttctttacgttatgaaatttcagactttacaa 145
Query: 884 gaagcaattgaaatcaataactctgttcctcaaggattgagcagttctatatttacaaag 943
|||||||||||||| || || || ||||| |||||||| || |||||||| || ||
Sbjct: 146 gaagcaattgaaataaacaattcagttccccaaggattaagtagttctatcttcacccgc 205
Query: 944 aggccagatattatttttaagtggctcgggccccatggtagtgattgtggtatagtgaat 1003
| || || ||||| || |||||| | ||||| | || ||||||||||| || ||||||
Sbjct: 206 aaacctgaaattatcttcaagtggattgggccactaggaagtgattgtggaattgtgaat 265
Query: 1004 gtgaacatacctactaatggtgctgaaattggtggagcatttggtggagaaaaagcaact 1063
|| || ||||| || |||||||||||||||||||| || |||||||| ||||| || ||
Sbjct: 266 gtaaatataccaaccaatggtgctgaaattggtggtgcttttggtggtgaaaaggctaca 325
Query: 1064 ggtggtggacgagaagcagggagtgattcctggaagca 1101
|| ||||| || ||||||||||||||||| ||||||||
Sbjct: 326 gggggtggccgggaagcagggagtgattcttggaagca 363
>gb|DT486568.1|DT486568 WS02531.B21_F14 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02531_F14 3', mRNA sequence
Length = 535
Score = 139 bits (70), Expect = 3e-031
Identities = 160/190 (84%)
Strand = Plus / Minus
Query: 984 gtgattgtggtatagtgaatgtgaacatacctactaatggtgctgaaattggtggagcat 1043
||||||||||||| |||||||| || ||||| || |||||||||||||||||||| || |
Sbjct: 534 gtgattgtggtattgtgaatgtaaatataccaacgaatggtgctgaaattggtggtgctt 475
Query: 1044 ttggtggagaaaaagcaactggtggtggacgagaagcagggagtgattcctggaagcagt 1103
||||||||||||| || || || ||||| || |||||||| |||||||| |||||||| |
Sbjct: 474 ttggtggagaaaaggctacagggggtggccgtgaagcaggaagtgattcttggaagcaat 415
Query: 1104 acatgaggagggcgacttgtacaatcaactatgggagcgagctacctctagcccagggaa 1163
||||||| | | |||||||| ||||| ||||||| ||| |||| || || || ||||
Sbjct: 414 acatgagacgctcaacttgtacgatcaattatgggaatgagttaccactggcacaaggaa 355
Query: 1164 tcaattttgg 1173
||||||||||
Sbjct: 354 tcaattttgg 345
>gb|DT515101.1|DT515101 WS02426.B21_K11 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02426_K11 3', mRNA sequence
Length = 786
Score = 139 bits (70), Expect = 3e-031
Identities = 226/278 (81%)
Strand = Plus / Minus
Query: 824 gttgtgaaagaagaactctttggtcctgtcctttatgttatgaaatttcagaccttgaag 883
||||| ||||||||| | |||| |||||| ||||||||||||||||||||||| || |
Sbjct: 727 gttgttaaagaagaattatttgctcctgttctttatgttatgaaatttcagactttacaa 668
Query: 884 gaagcaattgaaatcaataactctgttcctcaaggattgagcagttctatatttacaaag 943
|||||||||||||| || || || ||||| |||||||| || |||||||| || ||
Sbjct: 667 gaagcaattgaaataaacaattcagttccccaaggattaagtagttctatcttcacccgc 608
Query: 944 aggccagatattatttttaagtggctcgggccccatggtagtgattgtggtatagtgaat 1003
| || || ||||| || |||||| | ||||| | || ||||||||||| || ||||||
Sbjct: 607 aaacctgaaattatcttcaagtggattgggccactaggaagtgattgtggaattgtgaat 548
Query: 1004 gtgaacatacctactaatggtgctgaaattggtggagcatttggtggagaaaaagcaact 1063
|| || ||||| || || ||||| ||||||||||| || |||||||| ||||| || ||
Sbjct: 547 gtaaatataccaaccaacggtgccgaaattggtggtgcttttggtggcgaaaaggctaca 488
Query: 1064 ggtggtggacgagaagcagggagtgattcctggaagca 1101
|| ||||| || ||||||||||||||||| ||||||||
Sbjct: 487 gggggtggccgtgaagcagggagtgattcttggaagca 450
>gb|CV248956.1|CV248956 WS01122.B21_I14 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01122_I14 3', mRNA sequence
Length = 691
Score = 135 bits (68), Expect = 5e-030
Identities = 176/212 (83%)
Strand = Plus / Minus
Query: 962 aagtggctcgggccccatggtagtgattgtggtatagtgaatgtgaacatacctactaat 1021
|||||| | ||||| || || |||||||||||||| |||||||| || ||||| || |||
Sbjct: 515 aagtggattgggcctcaaggaagtgattgtggtattgtgaatgtaaatataccaacgaat 456
Query: 1022 ggtgctgaaattggtggagcatttggtggagaaaaagcaactggtggtggacgagaagca 1081
||||||||||||||||| || |||||||||||||| || || || ||||| || ||||||
Sbjct: 455 ggtgctgaaattggtggtgcttttggtggagaaaaggctacagggggtggccgtgaagca 396
Query: 1082 gggagtgattcctggaagcagtacatgaggagggcgacttgtacaatcaactatgggagc 1141
|| |||||||| |||| ||| |||||||| | | |||||||| ||||| |||||||
Sbjct: 395 ggaagtgattcttggaggcaatacatgagacgctcaacttgtacgatcaattatgggaat 336
Query: 1142 gagctacctctagcccagggaatcaattttgg 1173
||| |||| || || || ||||||||||||||
Sbjct: 335 gagttaccactggcacaaggaatcaattttgg 304
Score = 83.8 bits (42), Expect = 2e-014
Identities = 93/110 (84%)
Strand = Plus / Minus
Query: 824 gttgtgaaagaagaactctttggtcctgtcctttatgttatgaaatttcagaccttgaag 883
||||| |||||||| | |||| |||||| ||||| ||||||||||||||||| || |
Sbjct: 653 gttgttaaagaagagttatttgctcctgttctttacgttatgaaatttcagactttacaa 594
Query: 884 gaagcaattgaaatcaataactctgttcctcaaggattgagcagttctat 933
|||||||||||||| || || || |||||||||||||| || ||||||||
Sbjct: 593 gaagcaattgaaataaacaattcagttcctcaaggattaagtagttctat 544
>gb|BU894569.1|BU894569 X011D10 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 581
Score = 133 bits (67), Expect = 2e-029
Identities = 262/327 (80%)
Strand = Plus / Plus
Query: 847 tcctgtcctttatgttatgaaatttcagaccttgaaggaagcaattgaaatcaataactc 906
|||||| ||||||||||||||||||||||| || | ||||| |||||||| || || ||
Sbjct: 9 tcctgttctttatgttatgaaatttcagactttacaagaagccattgaaataaacaattc 68
Query: 907 tgttcctcaaggattgagcagttctatatttacaaagaggccagatattatttttaagtg 966
||||| |||||| | || |||||||| || || | || || ||||| || |||||
Sbjct: 69 agttccccaaggactaagtagttctatcttcactcgcaaacctgaaattatcttcaagtg 128
Query: 967 gctcgggccccatggtagtgattgtggtatagtgaatgtgaacatacctactaatggtgc 1026
| | ||||| | || ||||||||||| || |||||||| || ||||| || ||||||||
Sbjct: 129 gattgggccactaggaagtgattgtggaattgtgaatgtaaatataccaaccaatggtgc 188
Query: 1027 tgaaattggtggagcatttggtggagaaaaagcaactggtggtggacgagaagcagggag 1086
|||||||||||| || |||||||| ||||| || || || ||||| || |||||||||||
Sbjct: 189 tgaaattggtggtgcttttggtggcgaaaaggctacagggggtggccgtgaagcagggag 248
Query: 1087 tgattcctggaagcagtacatgaggagggcgacttgtacaatcaactatgggagcgagct 1146
|||||| |||||||| || ||| | | | |||||||||||||| || || | |||||
Sbjct: 249 tgattcttggaagcaatatatgcgacgctcaacttgtacaatcaattacggtaatgagct 308
Query: 1147 acctctagcccagggaatcaattttgg 1173
||| || || || ||||||||||||||
Sbjct: 309 accactggcacaaggaatcaattttgg 335
>gb|BI126678.1|BI126678 I078P77P Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 604
Score = 129 bits (65), Expect = 3e-028
Identities = 128/149 (85%)
Strand = Plus / Plus
Query: 962 aagtggctcgggccccatggtagtgattgtggtatagtgaatgtgaacatacctactaat 1021
|||||| | ||||| || || |||||||||||||| |||||||| || ||||| || |||
Sbjct: 440 aagtggattgggcctcaaggaagtgattgtggtattgtgaatgtaaatataccaacaaat 499
Query: 1022 ggtgctgaaattggtggagcatttggtggagaaaaagcaactggtggtggacgagaagca 1081
||||||||||||||||| || |||||||||||||| || || || ||||| || ||||||
Sbjct: 500 ggtgctgaaattggtggtgcttttggtggagaaaaggctacagggggtggccgtgaagca 559
Query: 1082 gggagtgattcctggaagcagtacatgag 1110
|| |||||||| |||||||| ||||||||
Sbjct: 560 ggaagtgattcttggaagcaatacatgag 588
Score = 83.8 bits (42), Expect = 2e-014
Identities = 93/110 (84%)
Strand = Plus / Plus
Query: 824 gttgtgaaagaagaactctttggtcctgtcctttatgttatgaaatttcagaccttgaag 883
||||| |||||||| | |||| |||||| ||||| ||||||||||||||||| || |
Sbjct: 302 gttgttaaagaagagttatttgctcctgttctttacgttatgaaatttcagactttacaa 361
Query: 884 gaagcaattgaaatcaataactctgttcctcaaggattgagcagttctat 933
|||||||||||||| || || || |||||||||||||| || ||||||||
Sbjct: 362 gaagcaattgaaataaacaattcagttcctcaaggattaagtagttctat 411
Score = 63.9 bits (32), Expect = 2e-008
Identities = 125/156 (80%)
Strand = Plus / Plus
Query: 523 tgctgttggtacagcaggacaacgctgcactacatgtcgtaggctgattcttcatgagaa 582
||||||||| ||||| || || || ||||| ||||| || |||||| |||| |||||||
Sbjct: 1 tgctgttgggacagctggtcagcgttgcacaacatgccgcaggctgcttctacatgagag 60
Query: 583 catatatcaaaccttccttgatcagcttgttgaggtatacaaacaagtccgaattgggga 642
||||||||| | | |||||||| || |||| || ||||| ||||| ||| |||||
Sbjct: 61 catatatcagagagtacttgatcaactacttgatgtgtacaagcaagttaaaatcgggga 120
Query: 643 tccgttggagaaaggcaccttactgggaccactgca 678
||| ||||| ||||||||||| || || ||||||||
Sbjct: 121 tccattggaaaaaggcaccttgctcgggccactgca 156
>gb|CN523692.1|CN523692 GQ015M12.T3_G04 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M12_G04 5', mRNA sequence
Length = 777
Score = 129 bits (65), Expect = 3e-028
Identities = 227/281 (80%)
Strand = Plus / Plus
Query: 65 ataccatctgaacgaccaaaccatatgatgatggaggtgtggaatccccttggagttgtg 124
||||| |||||||| ||||| ||| ||| ||||| |||||||||| |||||| ||||
Sbjct: 72 ataccttctgaacgtccaaatcatgcaatgctggagatgtggaatcctcttggaattgtt 131
Query: 125 ggtgttataacggcatttaatttcccttgtgctgtgcttggttggaatgcttgcattgct 184
||||| || || || || || || || |||||||| || || |||||||||||||||||
Sbjct: 132 ggtgtgattacagctttcaactttccatgtgctgttctaggatggaatgcttgcattgca 191
Query: 185 ttggtctgtggaaattgtgtcgtctggaaaggtgctccaacaactccactgatcactatt 244
| || ||||| |||||||| |||||||||||||| ||||||||||| |||| || |||
Sbjct: 192 ctagtatgtggcaattgtgttgtctggaaaggtgcaccaacaactcctttgattaccatt 251
Query: 245 gcaatgacaaaaatagtggctagtgtattggagaagaacaacttgccaggcgcaattttt 304
|||||||||| | || ||| | || || |||||||| ||||| || |||||||||
Sbjct: 252 gcaatgacaaggctggtagctggggtgttagagaagaataacttacctcctgcaattttt 311
Query: 305 acatctttttgtgggggcactgaaattggtcaagcaattgc 345
||||| |||||||| || |||| ||||| |||||||||||
Sbjct: 312 acatccttttgtggtggtgctgatattggccaagcaattgc 352
Score = 85.7 bits (43), Expect = 4e-015
Identities = 163/203 (80%)
Strand = Plus / Plus
Query: 476 atggatgatgcagatatccagctagctgtgcgatctgtcttgttcgctgctgttggtaca 535
||||||||||| || |||||||||||||| | ||||| |||| ||||||||||| |||
Sbjct: 483 atggatgatgctgacatccagctagctgttcattctgttctgtttgctgctgttgggaca 542
Query: 536 gcaggacaacgctgcactacatgtcgtaggctgattcttcatgagaacatatatcaaacc 595
|| || || |||||||| ||||| || |||||| |||| ||||| | ||||||||| |
Sbjct: 543 gctggtcagcgctgcacaacatgccgcaggctgcttctacatgaaagcatatatcagaga 602
Query: 596 ttccttgatcagcttgttgaggtatacaaacaagtccgaattggggatccgttggagaaa 655
| |||||||| || |||| |||||||| ||||| ||||||| |||| ||||| ||
Sbjct: 603 gtacttgatcaactacttgatgtatacaagcaagttaaaattgggaatccattggaaaag 662
Query: 656 ggcaccttactgggaccactgca 678
|||| ||| || |||||| ||||
Sbjct: 663 ggcaacttgcttggaccattgca 685
>gb|AJ771190.1|AJ771190 AJ771190 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0001500002H11F1, mRNA sequence
Length = 502
Score = 129 bits (65), Expect = 3e-028
Identities = 128/149 (85%)
Strand = Plus / Plus
Query: 962 aagtggctcgggccccatggtagtgattgtggtatagtgaatgtgaacatacctactaat 1021
|||||| | ||||| || || |||||||||||||| |||||||| || ||||| || |||
Sbjct: 341 aagtggattgggcctcaaggaagtgattgtggtattgtgaatgtaaatataccaacaaat 400
Query: 1022 ggtgctgaaattggtggagcatttggtggagaaaaagcaactggtggtggacgagaagca 1081
||||||||||||||||| || |||||||||||||| || || || ||||| || ||||||
Sbjct: 401 ggtgctgaaattggtggtgcttttggtggagaaaaggctacagggggtggccgtgaagca 460
Query: 1082 gggagtgattcctggaagcagtacatgag 1110
|| |||||||| |||||||| ||||||||
Sbjct: 461 ggaagtgattcttggaagcaatacatgag 489
Score = 83.8 bits (42), Expect = 2e-014
Identities = 93/110 (84%)
Strand = Plus / Plus
Query: 824 gttgtgaaagaagaactctttggtcctgtcctttatgttatgaaatttcagaccttgaag 883
||||| |||||||| | |||| |||||| ||||| ||||||||||||||||| || |
Sbjct: 203 gttgttaaagaagagttatttgctcctgttctttacgttatgaaatttcagactttacaa 262
Query: 884 gaagcaattgaaatcaataactctgttcctcaaggattgagcagttctat 933
|||||||||||||| || || || |||||||||||||| || ||||||||
Sbjct: 263 gaagcaattgaaataaacaattcagttcctcaaggattaagtagttctat 312
Score = 52.0 bits (26), Expect = 6e-005
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 634 aattggggatccgttggagaaaggcaccttactgggaccactgcacactcctgcttcaaa 693
|||||||||||| ||||| ||||||||||| || || |||||||| ||| ||| ||||
Sbjct: 13 aattggggatccattggaaaaaggcaccttgcttgggccactgcatacttctgaatcaag 72
Query: 694 agagaacttt 703
| ||||||||
Sbjct: 73 aaagaacttt 82
>gb|DT482057.1|DT482057 WS02533.BR_M05 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02533_M05 5', mRNA sequence
Length = 762
Score = 123 bits (62), Expect = 2e-026
Identities = 158/190 (83%)
Strand = Plus / Plus
Query: 65 ataccatctgaacgaccaaaccatatgatgatggaggtgtggaatccccttggagttgtg 124
||||| |||||||| ||||| ||| ||| ||||| |||||||||| |||||| ||||
Sbjct: 566 ataccttctgaacgtccaaatcatgcaatgctggagatgtggaatcctcttggaattgtt 625
Query: 125 ggtgttataacggcatttaatttcccttgtgctgtgcttggttggaatgcttgcattgct 184
||||| || || || || || || || |||||||| ||||| |||||||||||||||||
Sbjct: 626 ggtgtgattacagctttcaactttccatgtgctgttcttggatggaatgcttgcattgca 685
Query: 185 ttggtctgtggaaattgtgtcgtctggaaaggtgctccaacaactccactgatcactatt 244
| || ||||| |||||||| |||||||||||||| ||||||||||| |||| || |||
Sbjct: 686 ctagtatgtggcaattgtgttgtctggaaaggtgcaccaacaactcctttgattaccatt 745
Query: 245 gcaatgacaa 254
||||||||||
Sbjct: 746 gcaatgacaa 755
>gb|DT510474.1|DT510474 WS02426.BR_K11 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02426_K11 5', mRNA sequence
Length = 726
Score = 123 bits (62), Expect = 2e-026
Identities = 224/278 (80%)
Strand = Plus / Plus
Query: 824 gttgtgaaagaagaactctttggtcctgtcctttatgttatgaaatttcagaccttgaag 883
||||| ||||||||| | |||| |||||| ||||||||||||||||||||||| || |
Sbjct: 61 gttgttaaagaagaattatttgctcctgttctttatgttatgaaatttcagactttacaa 120
Query: 884 gaagcaattgaaatcaataactctgttcctcaaggattgagcagttctatatttacaaag 943
|||||||||||||| || || || ||||| |||||||| || |||||||| || ||
Sbjct: 121 gaagcaattgaaataaacaattcagttccccaaggattaagtagttctatcttcacccgc 180
Query: 944 aggccagatattatttttaagtggctcgggccccatggtagtgattgtggtatagtgaat 1003
| || || ||||| || |||||| | ||||| | || ||||||||||| || ||||||
Sbjct: 181 aaacctgaaattatcttcaagtggattgggccactaggaagtgattgtggaattgtgaat 240
Query: 1004 gtgaacatacctactaatggtgctgaaattggtggagcatttggtggagaaaaagcaact 1063
|| || ||||| || || ||||| ||||||||||| || |||||||| ||||| || ||
Sbjct: 241 gtaaatataccaaccaacggtgccgaaattggtggtgcttttggtggcgaaaaggctaca 300
Query: 1064 ggtggtggacgagaagcagggagtgattcctggaagca 1101
|| ||| || ||||||||||||||||| ||||||||
Sbjct: 301 gggtttggccgtgaagcagggagtgattcttggaagca 338
>gb|DV466136.1|DV466136 MTUNUL1.P47.G04 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 839
Score = 123 bits (62), Expect = 2e-026
Identities = 158/190 (83%)
Strand = Plus / Plus
Query: 65 ataccatctgaacgaccaaaccatatgatgatggaggtgtggaatccccttggagttgtg 124
||||| |||||||| ||||| ||| ||| ||||| |||||||||| |||||| ||||
Sbjct: 592 ataccttctgaacgtccaaatcatgcaatgctggagatgtggaatcctcttggaattgtt 651
Query: 125 ggtgttataacggcatttaatttcccttgtgctgtgcttggttggaatgcttgcattgct 184
||||| || || || || || || || |||||||| ||||| |||||||||||||||||
Sbjct: 652 ggtgtgattacagctttcaactttccatgtgctgttcttggatggaatgcttgcattgca 711
Query: 185 ttggtctgtggaaattgtgtcgtctggaaaggtgctccaacaactccactgatcactatt 244
| || ||||| |||||||| |||||||||||||| ||||||||||| |||| || |||
Sbjct: 712 ctagtatgtggcaattgtgttgtctggaaaggtgcaccaacaactcctttgattaccatt 771
Query: 245 gcaatgacaa 254
||||||||||
Sbjct: 772 gcaatgacaa 781
>gb|DV466348.1|DV466348 MTUNUL1.P5.D11 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 762
Score = 123 bits (62), Expect = 2e-026
Identities = 158/190 (83%)
Strand = Plus / Plus
Query: 65 ataccatctgaacgaccaaaccatatgatgatggaggtgtggaatccccttggagttgtg 124
||||| |||||||| ||||| ||| ||| ||||| |||||||||| |||||| ||||
Sbjct: 555 ataccttctgaacgtccaaatcatgcaatgctggagatgtggaatcctcttggaattgtt 614
Query: 125 ggtgttataacggcatttaatttcccttgtgctgtgcttggttggaatgcttgcattgct 184
||||| || || || || || || || |||||||| ||||| |||||||||||||||||
Sbjct: 615 ggtgtgattacagctttcaactttccatgtgctgttcttggatggaatgcttgcattgca 674
Query: 185 ttggtctgtggaaattgtgtcgtctggaaaggtgctccaacaactccactgatcactatt 244
| || ||||| |||||||| |||||||||||||| ||||||||||| |||| || |||
Sbjct: 675 ctagtatgtggcaattgtgttgtctggaaaggtgcaccaacaactcctttgattaccatt 734
Query: 245 gcaatgacaa 254
||||||||||
Sbjct: 735 gcaatgacaa 744
>gb|AJ771130.1|AJ771130 AJ771130 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0001500002B09F1, mRNA sequence
Length = 503
Score = 121 bits (61), Expect = 8e-026
Identities = 127/149 (85%)
Strand = Plus / Plus
Query: 962 aagtggctcgggccccatggtagtgattgtggtatagtgaatgtgaacatacctactaat 1021
|||||| | ||||| || || |||||||||||||| |||||||| || ||||| || |||
Sbjct: 342 aagtggattgggcctcaaggaagtgattgtggtattgtgaatgtaaatataccaacaaat 401
Query: 1022 ggtgctgaaattggtggagcatttggtggagaaaaagcaactggtggtggacgagaagca 1081
||||||||||||||||| || |||||||||||||| || || || |||| || ||||||
Sbjct: 402 ggtgctgaaattggtggtgcttttggtggagaaaaggctacagggggtgaccgtgaagca 461
Query: 1082 gggagtgattcctggaagcagtacatgag 1110
|| |||||||| |||||||| ||||||||
Sbjct: 462 ggaagtgattcttggaagcaatacatgag 490
Score = 75.8 bits (38), Expect = 4e-012
Identities = 92/110 (83%)
Strand = Plus / Plus
Query: 824 gttgtgaaagaagaactctttggtcctgtcctttatgttatgaaatttcagaccttgaag 883
||||| |||||||| | |||| |||||| ||||| ||||||||||||||||| || |
Sbjct: 204 gttgttaaagaagagttatttgctcctgttctttacgttatgaaatttcagactttacaa 263
Query: 884 gaagcaattgaaatcaataactctgttcctcaaggattgagcagttctat 933
|||||||||||||| || || || | |||||||||||| || ||||||||
Sbjct: 264 gaagcaattgaaataaacaattcagctcctcaaggattaagtagttctat 313
Score = 52.0 bits (26), Expect = 6e-005
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 634 aattggggatccgttggagaaaggcaccttactgggaccactgcacactcctgcttcaaa 693
|||||||||||| ||||| ||||||||||| || || |||||||| ||| ||| ||||
Sbjct: 14 aattggggatccattggaaaaaggcaccttgctcgggccactgcatacttctgaatcaag 73
Query: 694 agagaacttt 703
| ||||||||
Sbjct: 74 aaagaacttt 83
>gb|BU883697.1|BU883697 UM98TB11 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 502
Score = 109 bits (55), Expect = 3e-022
Identities = 157/191 (82%)
Strand = Plus / Plus
Query: 983 agtgattgtggtatagtgaatgtgaacatacctactaatggtgctgaaattggtggagca 1042
||||||||||| || |||||||| || ||||| || |||||||| ||||||||||| ||
Sbjct: 61 agtgattgtggaattgtgaatgtaaatataccaaccaatggtgccgaaattggtggtgct 120
Query: 1043 tttggtggagaaaaagcaactggtggtggacgagaagcagggagtgattcctggaagcag 1102
|||||||| ||||| || || || ||||| || ||||||||||||||||| ||||||||
Sbjct: 121 tttggtggcgaaaaggctacagggggtggccgtgaagcagggagtgattcttggaagcaa 180
Query: 1103 tacatgaggagggcgacttgtacaatcaactatgggagcgagctacctctagcccaggga 1162
|| ||| | | | |||||||||||||| || || | |||||||| || || || |||
Sbjct: 181 tatatgcgacgctcaacttgtacaatcaattacggtaatgagctaccactggcacaagga 240
Query: 1163 atcaattttgg 1173
|||||||||||
Sbjct: 241 atcaattttgg 251
>gb|CV264362.1|CV264362 WS02024.B21_F05 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02024_F05 3', mRNA sequence
Length = 658
Score = 109 bits (55), Expect = 3e-022
Identities = 157/191 (82%)
Strand = Plus / Minus
Query: 983 agtgattgtggtatagtgaatgtgaacatacctactaatggtgctgaaattggtggagca 1042
||||||||||| || |||||||| || ||||| || |||||||| ||||||||||| ||
Sbjct: 546 agtgattgtggaattgtgaatgtaaatataccaaccaatggtgccgaaattggtggtgct 487
Query: 1043 tttggtggagaaaaagcaactggtggtggacgagaagcagggagtgattcctggaagcag 1102
|||||||| ||||| || || || ||||| || ||||||||||||||||| ||||||||
Sbjct: 486 tttggtggcgaaaaggctacagggggtggccgtgaagcagggagtgattcttggaagcaa 427
Query: 1103 tacatgaggagggcgacttgtacaatcaactatgggagcgagctacctctagcccaggga 1162
|| ||| | | | |||||||||||||| || || | |||||||| || || || |||
Sbjct: 426 tatatgcgacgctcaacttgtacaatcaattacggtaatgagctaccactggcacaagga 367
Query: 1163 atcaattttgg 1173
|||||||||||
Sbjct: 366 atcaattttgg 356
>gb|CV271420.1|CV271420 WS0154.B21_K13 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0154_K13 3', mRNA sequence
Length = 658
Score = 109 bits (55), Expect = 3e-022
Identities = 157/191 (82%)
Strand = Plus / Minus
Query: 983 agtgattgtggtatagtgaatgtgaacatacctactaatggtgctgaaattggtggagca 1042
||||||||||| || |||||||| || ||||| || |||||||| ||||||||||| ||
Sbjct: 546 agtgattgtggaattgtgaatgtaaatataccaaccaatggtgccgaaattggtggtgct 487
Query: 1043 tttggtggagaaaaagcaactggtggtggacgagaagcagggagtgattcctggaagcag 1102
|||||||| ||||| || || || ||||| || ||||||||||||||||| ||||||||
Sbjct: 486 tttggtggcgaaaaggctacagggggtggccgtgaagcagggagtgattcttggaagcaa 427
Query: 1103 tacatgaggagggcgacttgtacaatcaactatgggagcgagctacctctagcccaggga 1162
|| ||| | | | |||||||||||||| || || | |||||||| || || || |||
Sbjct: 426 tatatgcgacgctcaacttgtacaatcaattacggtaatgagctaccactggcacaagga 367
Query: 1163 atcaattttgg 1173
|||||||||||
Sbjct: 366 atcaattttgg 356
>gb|AI165363.1|AI165363 A082p26u Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 389
Score = 83.8 bits (42), Expect = 2e-014
Identities = 93/110 (84%)
Strand = Plus / Plus
Query: 824 gttgtgaaagaagaactctttggtcctgtcctttatgttatgaaatttcagaccttgaag 883
||||| ||||||||| | |||| |||||| ||||||||||||||||||||||| || |
Sbjct: 179 gttgttaaagaagaattatttgctcctgttctttatgttatgaaatttcagactttacaa 238
Query: 884 gaagcaattgaaatcaataactctgttcctcaaggattgagcagttctat 933
|||||||||||||| || || || ||||| |||||| | || ||||||||
Sbjct: 239 gaagcaattgaaataaacaattcagttccccaaggactaagtagttctat 288
Score = 58.0 bits (29), Expect = 1e-006
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 983 agtgattgtggtatagtgaatgtgaacatacctactaatggtgctgaaattgg 1035
||||||||||| || |||||||| || ||||| || |||||||||||||||||
Sbjct: 337 agtgattgtggaattgtgaatgtaaatataccaaccaatggtgctgaaattgg 389
>gb|BU890887.1|BU890887 P043A09 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 340
Score = 83.8 bits (42), Expect = 2e-014
Identities = 93/110 (84%)
Strand = Plus / Plus
Query: 824 gttgtgaaagaagaactctttggtcctgtcctttatgttatgaaatttcagaccttgaag 883
||||| |||||||| | |||| |||||| ||||| ||||||||||||||||| || |
Sbjct: 133 gttgttaaagaagagttatttgctcctgttctttacgttatgaaatttcagactttacaa 192
Query: 884 gaagcaattgaaatcaataactctgttcctcaaggattgagcagttctat 933
|||||||||||||| || || || |||||||||||||| || ||||||||
Sbjct: 193 gaagcaattgaaataaacaattcagttcctcaaggattaagtagttctat 242
Score = 60.0 bits (30), Expect = 3e-007
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 962 aagtggctcgggccccatggtagtgattgtggtatagtgaatgtgaacatacctactaat 1021
|||||| | ||||| || || |||||||||||||| |||||||| || ||||| || |||
Sbjct: 271 aagtggattgggcctcaaggaagtgattgtggtattgtgaatgtaaatataccaacaaat 330
Query: 1022 ggtgctgaaa 1031
||||||||||
Sbjct: 331 ggtgctgaaa 340
>gb|AJ771214.1|AJ771214 AJ771214 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0001500003D07F1, mRNA sequence
Length = 347
Score = 83.8 bits (42), Expect = 2e-014
Identities = 93/110 (84%)
Strand = Plus / Plus
Query: 824 gttgtgaaagaagaactctttggtcctgtcctttatgttatgaaatttcagaccttgaag 883
||||| ||||||||| | |||| |||||| ||||| ||||||||||||||||| || |
Sbjct: 214 gttgttaaagaagaattatttgctcctgttctttacgttatgaaatttcagactttacaa 273
Query: 884 gaagcaattgaaatcaataactctgttcctcaaggattgagcagttctat 933
|||||||||||||| || || || ||||| |||||||| || ||||||||
Sbjct: 274 gaagcaattgaaataaacaattcagttccccaaggattaagtagttctat 323
>gb|AJ780435.1|AJ780435 AJ780435 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0000900008A12F1, mRNA sequence
Length = 668
Score = 69.9 bits (35), Expect = 3e-010
Identities = 98/119 (82%)
Strand = Plus / Plus
Query: 65 ataccatctgaacgaccaaaccatatgatgatggaggtgtggaatccccttggagttgtg 124
||||| |||||||| ||||| ||| ||| ||||| |||||||||| |||||| ||||
Sbjct: 540 ataccttctgaacgtccaaatcatgcaatgctggagatgtggaatcctcttggaattgtt 599
Query: 125 ggtgttataacggcatttaatttcccttgtgctgtgcttggttggaatgcttgcattgc 183
||||| || || || || || || ||||||||||| ||||| |||||||| ||||||||
Sbjct: 600 ggtgtgattacagcgttcaactttccttgtgctgttcttggatggaatgcctgcattgc 658
>gb|CV255534.1|CV255534 WS02414.B21_E16 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02414_E16 3', mRNA sequence
Length = 727
Score = 65.9 bits (33), Expect = 4e-009
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 824 gttgtgaaagaagaactctttggtcctgtcctttatgttatgaaatttcagac 876
||||| ||||||||| | |||| |||||| |||||||||||||||||||||||
Sbjct: 517 gttgttaaagaagaattatttgctcctgttctttatgttatgaaatttcagac 465
>gb|BI124815.1|BI124815 I051P35P Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 296
Score = 63.9 bits (32), Expect = 2e-008
Identities = 75/88 (85%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 847 tcctgtcctttatgtta-tgaaatttcagaccttgaaggaagcaattgaaatcaataact 905
|||||| ||||| |||| ||||||||||||| || | |||||||||||||| || || |
Sbjct: 97 tcctgttctttacgttagtgaaatttcagactttacaagaagcaattgaaataaacaatt 156
Query: 906 ctgttcctcaaggattgagcagttctat 933
| |||||||||||||| || ||||||||
Sbjct: 157 cagttcctcaaggattaagtagttctat 184
Score = 60.0 bits (30), Expect = 3e-007
Identities = 67/78 (85%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 962 aagtggctcgggccccatggtagtgattgtggtatagt-gaatgtgaacatacctactaa 1020
|||||| | ||||| || || |||||||||||||| || |||||| || ||||| || ||
Sbjct: 214 aagtggattgggcctcaaggaagtgattgtggtattgtcgaatgtaaatataccaacaaa 273
Query: 1021 tggtgctgaaattggtgg 1038
||||||||||||||||||
Sbjct: 274 tggtgctgaaattggtgg 291
>gb|CX183126.1|CX183126 C01_45-57_05.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 691
Score = 61.9 bits (31), Expect = 6e-008
Identities = 97/119 (81%)
Strand = Plus / Plus
Query: 65 ataccatctgaacgaccaaaccatatgatgatggaggtgtggaatccccttggagttgtg 124
||||| |||||||| ||||| ||| ||| ||||| |||||||||| |||||| ||||
Sbjct: 565 ataccttctgaacgtccaaatcatgcaatgctggagatgtggaatcctcttggaattgtt 624
Query: 125 ggtgttataacggcatttaatttcccttgtgctgtgcttggttggaatgcttgcattgc 183
||||| || || || ||| | || || |||||||| || || |||||||||||||||||
Sbjct: 625 ggtgtgattacagcttttcactttccatgtgctgttctaggatggaatgcttgcattgc 683
>gb|CK105244.1|CK105244 I078P77.5pR Populus senescing leaves cDNA library Populus tremula
cDNA clone I078P77 5', mRNA sequence
Length = 417
Score = 60.0 bits (30), Expect = 3e-007
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 824 gttgtgaaagaagaactctttggtcctgtcctttatgttatgaaatttcagaccttgaag 883
||||| |||||||| | |||| |||||| ||||| ||||||||||||||||| || |
Sbjct: 328 gttgttaaagaagagttatttgctcctgttctttacgttatgaaatttcagactttacaa 387
Query: 884 gaagcaattgaaat 897
||||||||||||||
Sbjct: 388 gaagcaattgaaat 401
Score = 58.0 bits (29), Expect = 1e-006
Identities = 122/153 (79%)
Strand = Plus / Plus
Query: 526 tgttggtacagcaggacaacgctgcactacatgtcgtaggctgattcttcatgagaacat 585
|||||| ||||| || || || ||||| ||||| || |||||| |||| ||||||| |||
Sbjct: 30 tgttgggacagctggtcagcgttgcacaacatgccgcaggctgcttctacatgagagcat 89
Query: 586 atatcaaaccttccttgatcagcttgttgaggtatacaaacaagtccgaattggggatcc 645
|||||| | | |||||||| || |||| || ||||| ||||| ||| ||||||||
Sbjct: 90 atatcagagagtacttgatcaactacttgatgtgtacaagcaagttaaaatcggggatcc 149
Query: 646 gttggagaaaggcaccttactgggaccactgca 678
||||| ||||||||||| || || ||||||||
Sbjct: 150 attggaaaaaggcaccttgctcgggccactgca 182
>gb|BU811307.1|BU811307 UL82TE12 Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 373
Score = 54.0 bits (27), Expect = 2e-005
Identities = 87/107 (81%)
Strand = Plus / Plus
Query: 1067 ggtggacgagaagcagggagtgattcctggaagcagtacatgaggagggcgacttgtaca 1126
||||| || ||||||||||||||||| |||||||| || ||| | | | |||||||||
Sbjct: 3 ggtggccgtgaagcagggagtgattcttggaagcaatatatgcgacgctcaacttgtaca 62
Query: 1127 atcaactatgggagcgagctacctctagcccagggaatcaattttgg 1173
||||| || || | |||||||| || || || ||||||||||||||
Sbjct: 63 atcaattacggtaatgagctaccactggcacaaggaatcaattttgg 109
>gb|AI161542.1|AI161542 A002P32U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 269
Score = 48.1 bits (24), Expect = 0.001
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 824 gttgtgaaagaagaactctttggtcctgtcctttatgttatgaaatttcagac 876
||||| ||||||||| | | || |||||| | ||||||||||| |||||||||
Sbjct: 163 gttgttaaagaagaattatntgctcctgttcnttatgttatganatttcagac 215
>gb|BU822623.1|BU822623 UB40BPB06 Populus tremula cambium cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 288
Score = 46.1 bits (23), Expect = 0.004
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1067 ggtggacgagaagcagggagtgattcctggaagca 1101
||||| || ||||||||||||||||| ||||||||
Sbjct: 57 ggtggccgtgaagcagggagtgattcttggaagca 91
>gb|CV257166.1|CV257166 WS0245.B21_N20 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0245_N20 3', mRNA sequence
Length = 484
Score = 44.1 bits (22), Expect = 0.015
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1076 gaagcagggagtgattcctggaagca 1101
||||||||||||||||| ||||||||
Sbjct: 481 gaagcagggagtgattcttggaagca 456
>gb|BI072427.1|BI072427 C075P61U Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 309
Score = 40.1 bits (20), Expect = 0.23
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 1118 acttgtacaatcaactatgggagcgagctacctctagcccagggaatcaattttgg 1173
|||||||| ||||| ||||||| ||| |||| || || || ||||||||||||||
Sbjct: 11 acttgtacgatcaattatgggaatgagttaccactggcacaaggaatcaattttgg 66
>gb|BI122421.1|BI122421 I006P50P Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 349
Score = 40.1 bits (20), Expect = 0.23
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 1118 acttgtacaatcaactatgggagcgagctacctctagcccagggaatcaattttgg 1173
|||||||| ||||| ||||||| ||| |||| || || || ||||||||||||||
Sbjct: 20 acttgtacgatcaattatgggaatgagttaccactggcacaaggaatcaattttgg 75
>gb|CF233474.1|CF233474 PtaJXO0024A6A0602 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 763
Score = 40.1 bits (20), Expect = 0.23
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1027 tgaaattggtggagcatttg 1046
||||||||||||||||||||
Sbjct: 512 tgaaattggtggagcatttg 493
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 200,998
Number of Sequences: 369679
Number of extensions: 200998
Number of successful extensions: 60762
Number of sequences better than 0.5: 46
Number of HSP's better than 0.5 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60642
Number of HSP's gapped (non-prelim): 105
length of query: 1462
length of database: 203,408,664
effective HSP length: 19
effective length of query: 1443
effective length of database: 196,384,763
effective search space: 283383213009
effective search space used: 283383213009
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)