BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1805013.2.2
(964 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BI130842.1|BI130842 G111P55Y Populus cambium cDNA librar... 127 8e-028
gb|BI131004.1|BI131004 G113P83Y Populus cambium cDNA librar... 127 8e-028
gb|CK103353.1|CK103353 G113P83.5pR Populus tension wood cDN... 127 8e-028
gb|CN523107.1|CN523107 GQ0121.B3_P07 GQ012 Populus trichoca... 127 8e-028
gb|CN550020.1|CN550020 GQ0244.B3_O09 GQ024 Populus trichoca... 127 8e-028
gb|CV239377.1|CV239377 WS0232.B21_D10 PT-MB-A-13 Populus tr... 127 8e-028
gb|CV257965.1|CV257965 WS0248.B21_C10 PTxD-ICC-N-A-14 Popul... 127 8e-028
gb|CV268022.1|CV268022 WS0204.B21_F12 PTxN-IB-N-A-11 Populu... 127 8e-028
gb|CV270274.1|CV270274 WS0151.B21_I22 PTxN-IB-A-6 Populus t... 127 8e-028
gb|CX658618.1|CX658618 PO01020C01 Poplar SC cDNA library Po... 127 8e-028
gb|CX660139.1|CX660139 PO01018E03 Poplar SC cDNA library Po... 127 8e-028
gb|DT488453.1|DT488453 WS02536.B21_H15 PT-MB-N-A-15 Populus... 127 8e-028
gb|DT490426.1|DT490426 WS02544.B21_O23 PT-MB-N-A-15 Populus... 127 8e-028
gb|DT492391.1|DT492391 WS02550.C21_J07 PT-MB-N-A-15 Populus... 127 8e-028
gb|DT505387.1|DT505387 WS01810.C21_M15 PTxD-IL-N-A-9 Populu... 127 8e-028
gb|BI131177.1|BI131177 G116P53Y Populus cambium cDNA librar... 119 2e-025
gb|CV268026.1|CV268026 WS0204.B21_F16 PTxN-IB-N-A-11 Populu... 119 2e-025
gb|CB240357.1|CB240357 PopSC00336 Poplar SC cDNA library Po... 115 3e-024
gb|CV269179.1|CV269179 WS0207.B21_I16 PTxN-IB-N-A-11 Populu... 115 3e-024
gb|DT490352.1|DT490352 WS02544.B21_L15 PT-MB-N-A-15 Populus... 115 3e-024
gb|CK093269.1|CK093269 G113P83.3pR Populus tension wood cDN... 113 1e-023
gb|BU873007.1|BU873007 Q050B05 Populus flower cDNA library ... 100 2e-019
gb|AI165103.1|AI165103 A075p26u Hybrid aspen plasmid librar... 66 3e-009
gb|AI164690.1|AI164690 A067P26U Hybrid aspen plasmid librar... 64 1e-008
gb|BI135651.1|BI135651 F056P40Y Populus flower cDNA library... 62 4e-008
gb|CA824755.1|CA824755 R47H01 two-month-old roots from clon... 62 4e-008
gb|CN520341.1|CN520341 GQ0107.B3_N20 GQ010 Populus trichoca... 62 4e-008
gb|CV275354.1|CV275354 WS0176.B21_D04 PTxD-NR-A-8 Populus t... 62 4e-008
gb|CX653837.1|CX653837 PO02007H08 Poplar SC cDNA library Po... 62 4e-008
gb|CX655835.1|CX655835 PO02040G06 Poplar SC cDNA library Po... 62 4e-008
gb|CX658163.1|CX658163 PO01010E03 Poplar SC cDNA library Po... 62 4e-008
gb|DT494631.1|DT494631 WS01118.BR.1_P22 PT-P-FL-A-2 Populus... 62 4e-008
gb|DT496161.1|DT496161 WS01122.BR_J12 PT-P-FL-A-2 Populus t... 62 4e-008
gb|DT496675.1|DT496675 WS01124.BR_B23 PT-P-FL-A-2 Populus t... 62 4e-008
gb|DT499091.1|DT499091 WS0117.BR_E09 PT-P-FL-A-2 Populus tr... 62 4e-008
gb|DT501302.1|DT501302 WS01312.BR_E07 PTxD-IL-FL-A-4 Populu... 62 4e-008
gb|DT501617.1|DT501617 WS01313.BR_H19 PTxD-IL-FL-A-4 Populu... 62 4e-008
gb|DT501677.1|DT501677 WS01313.BR_M02 PTxD-IL-FL-A-4 Populu... 62 4e-008
gb|DT504166.1|DT504166 WS01312.B21_E07 PTxD-IL-FL-A-4 Popul... 62 4e-008
gb|DT504467.1|DT504467 WS01313.B21_H19 PTxD-IL-FL-A-4 Popul... 62 4e-008
gb|DT504537.1|DT504537 WS01313.B21_M02 PTxD-IL-FL-A-4 Popul... 62 4e-008
gb|AI165025.1|AI165025 A073p46u Hybrid aspen plasmid librar... 58 7e-007
gb|BI136108.1|BI136108 F063P45Y Populus flower cDNA library... 58 7e-007
gb|CA822753.1|CA822753 R13C07 two-month-old roots from clon... 58 7e-007
gb|CX653937.1|CX653937 PO02010B08 Poplar SC cDNA library Po... 58 7e-007
gb|AI165639.1|AI165639 A087p56u Hybrid aspen plasmid librar... 56 3e-006
gb|CA930093.1|CA930093 MTU2CA.P7.A03 Aspen apex cDNA Librar... 56 3e-006
gb|CN522355.1|CN522355 GQ0124.B3_G19 GQ012 Populus trichoca... 56 3e-006
gb|CV281945.1|CV281945 WS0183.B21_E20 PTxD-IL-N-A-9 Populus... 56 3e-006
gb|BI135591.1|BI135591 F055P16Y Populus flower cDNA library... 54 1e-005
gb|BI136051.1|BI136051 F062P41Y Populus flower cDNA library... 54 1e-005
gb|BI137331.1|BI137331 F084P40Y Populus flower cDNA library... 54 1e-005
gb|BI137355.1|BI137355 F084P82Y Populus flower cDNA library... 54 1e-005
gb|BI137377.1|BI137377 F085P25Y Populus flower cDNA library... 54 1e-005
gb|BI137510.1|BI137510 F087P38Y Populus flower cDNA library... 54 1e-005
gb|BI137529.1|BI137529 F087P72Y Populus flower cDNA library... 54 1e-005
gb|BI137539.1|BI137539 F087P86Y Populus flower cDNA library... 54 1e-005
gb|BI137651.1|BI137651 F091P11Y Populus flower cDNA library... 54 1e-005
gb|BI137654.1|BI137654 F091P20Y Populus flower cDNA library... 54 1e-005
gb|BI137682.1|BI137682 F091P74Y Populus flower cDNA library... 54 1e-005
gb|BI137893.1|BI137893 F095P14Y Populus flower cDNA library... 54 1e-005
gb|BU837093.1|BU837093 T094E10 Populus apical shoot cDNA li... 54 1e-005
gb|BU868351.1|BU868351 M114G11 Populus flower cDNA library ... 54 1e-005
gb|DT482029.1|DT482029 WS02533.BR_K20 PT-MB-N-A-15 Populus ... 54 1e-005
gb|DT487430.1|DT487430 WS02533.B21_K20 PT-MB-N-A-15 Populus... 54 1e-005
gb|DT492926.1|DT492926 WS02552.C21_N23 PT-MB-N-A-15 Populus... 54 1e-005
gb|DT516467.1|DT516467 WS02431.B21_H20 PTxD-ICC-N-A-14 Popu... 54 1e-005
gb|BI135903.1|BI135903 F060P04Y Populus flower cDNA library... 50 2e-004
gb|BI136605.1|BI136605 F070P60Y Populus flower cDNA library... 50 2e-004
gb|BI137604.1|BI137604 F089P21Y Populus flower cDNA library... 50 2e-004
gb|CV257947.1|CV257947 WS0248.B21_B12 PTxD-ICC-N-A-14 Popul... 50 2e-004
gb|CV247685.1|CV247685 WS01118.B21_P22 PT-P-FL-A-2 Populus ... 48 6e-004
gb|CV263422.1|CV263422 WS02021.B21_I06 PTxN-IB-N-A-11 Popul... 48 6e-004
gb|BI131147.1|BI131147 G116P14Y Populus cambium cDNA librar... 46 0.002
gb|BI137548.1|BI137548 F088P02Y Populus flower cDNA library... 46 0.002
gb|CX653768.1|CX653768 PO02007A04 Poplar SC cDNA library Po... 46 0.002
gb|BI135916.1|BI135916 F060P38Y Populus flower cDNA library... 44 0.010
gb|BU810229.1|BU810229 UL67H05 Populus leaf cDNA library Po... 44 0.010
gb|CV232172.1|CV232172 WS0196.B21_M10 PT-DX-N-A-10 Populus ... 44 0.010
gb|DT490725.1|DT490725 WS02545.B21_M09 PT-MB-N-A-15 Populus... 44 0.010
gb|CV268211.1|CV268211 WS0204.B21_N19 PTxN-IB-N-A-11 Populu... 42 0.039
gb|BI135567.1|BI135567 F054P78Y Populus flower cDNA library... 40 0.15
gb|CA821397.1|CA821397 RSH02D05 two-month-old roots from cl... 40 0.15
gb|CA823565.1|CA823565 R28B11 two-month-old roots from clon... 40 0.15
gb|CV239001.1|CV239001 WS0231.B21_A11 PT-MB-A-13 Populus tr... 40 0.15
gb|CX169053.1|CX169053 H03_69-69_15.ab1 leaf inoculated wit... 40 0.15
gb|CX175683.1|CX175683 E04_69-66_10.ab1 leaf inoculated wit... 40 0.15
gb|CX181780.1|CX181780 E08_45-104_10.ab1 leaf inoculated wi... 40 0.15
>gb|BI130842.1|BI130842 G111P55Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 449
Score = 127 bits (64), Expect = 8e-028
Identities = 136/160 (85%)
Strand = Plus / Plus
Query: 89 agttctacctgcggtactacgtggggcacaagggcaagttcgggcacgagttcctcgagt 148
|||||||||| || |||||||| || |||| || || ||||| ||||| ||||| ||||
Sbjct: 28 agttctaccttcgttactacgtaggtcacagaggtaaattcggtcacgaattcctggagt 87
Query: 149 tcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgaca 208
|||||||||| || || ||||||||||| |||||||||||||| |||||||| |||||||
Sbjct: 88 tcgagttccgtccagatggcaagctccgatacgccaacaactctaactacaaaaacgaca 147
Query: 209 ccatgatccgcaaggaggtcttcgtctccccctccgtcct 248
||||||| ||||| || |||||| | ||||| |||||||
Sbjct: 148 ccatgattcgcaaagaagtcttccttacccccgccgtcct 187
Score = 40.1 bits (20), Expect = 0.15
Identities = 59/72 (81%)
Strand = Plus / Plus
Query: 439 atcttctactacctcgtccaggatctgaagtgcttcgtgttttcactcatcaacctccac 498
|||||||| || || |||||||| |||||||||| || || || |||||| ||||||
Sbjct: 378 atcttctattatcttgtccaggacttgaagtgctttgttttctctctcatctctctccac 437
Query: 499 ttcaagatcaag 510
||||| ||||||
Sbjct: 438 ttcaaaatcaag 449
>gb|BI131004.1|BI131004 G113P83Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 525
Score = 127 bits (64), Expect = 8e-028
Identities = 136/160 (85%)
Strand = Plus / Plus
Query: 89 agttctacctgcggtactacgtggggcacaagggcaagttcgggcacgagttcctcgagt 148
|||||||||| || |||||||| || |||| || || ||||| ||||| ||||| ||||
Sbjct: 27 agttctaccttcgttactacgtaggtcacagaggtaaattcggtcacgaattcctggagt 86
Query: 149 tcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgaca 208
|||||||||| || || ||||||||||| |||||||||||||| |||||||| |||||||
Sbjct: 87 tcgagttccgtccagatggcaagctccgatacgccaacaactctaactacaaaaacgaca 146
Query: 209 ccatgatccgcaaggaggtcttcgtctccccctccgtcct 248
||||||| ||||| || |||||| | ||||| |||||||
Sbjct: 147 ccatgattcgcaaagaagtcttccttacccccgccgtcct 186
Score = 44.1 bits (22), Expect = 0.010
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 439 atcttctactacctcgtccaggatctgaagtgcttcgtgttttcactcatcaacctccac 498
|||||||| || || |||||||| |||||||||| || || || |||||| ||||||
Sbjct: 377 atcttctattatcttgtccaggacttgaagtgctttgttttctctctcatctctctccac 436
Query: 499 ttcaagatcaagcc 512
||||| ||||||||
Sbjct: 437 ttcaaaatcaagcc 450
>gb|CK103353.1|CK103353 G113P83.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G113P83 5', mRNA sequence
Length = 535
Score = 127 bits (64), Expect = 8e-028
Identities = 136/160 (85%)
Strand = Plus / Plus
Query: 89 agttctacctgcggtactacgtggggcacaagggcaagttcgggcacgagttcctcgagt 148
|||||||||| || |||||||| || |||| || || ||||| ||||| ||||| ||||
Sbjct: 27 agttctaccttcgttactacgtaggtcacagaggtaaattcggtcacgaattcctggagt 86
Query: 149 tcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgaca 208
|||||||||| || || ||||||||||| |||||||||||||| |||||||| |||||||
Sbjct: 87 tcgagttccgtccagatggcaagctccgatacgccaacaactctaactacaaaaacgaca 146
Query: 209 ccatgatccgcaaggaggtcttcgtctccccctccgtcct 248
||||||| ||||| || |||||| | ||||| |||||||
Sbjct: 147 ccatgattcgcaaagaagtcttccttacccccgccgtcct 186
Score = 44.1 bits (22), Expect = 0.010
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 439 atcttctactacctcgtccaggatctgaagtgcttcgtgttttcactcatcaacctccac 498
|||||||| || || |||||||| |||||||||| || || || |||||| ||||||
Sbjct: 377 atcttctattatcttgtccaggacttgaagtgctttgttttctctctcatctctctccac 436
Query: 499 ttcaagatcaagcc 512
||||| ||||||||
Sbjct: 437 ttcaaaatcaagcc 450
>gb|CN523107.1|CN523107 GQ0121.B3_P07 GQ012 Populus trichocarpa x Populus deltoides cDNA
clone GQ0121_P07 5', mRNA sequence
Length = 291
Score = 127 bits (64), Expect = 8e-028
Identities = 136/160 (85%)
Strand = Plus / Plus
Query: 89 agttctacctgcggtactacgtggggcacaagggcaagttcgggcacgagttcctcgagt 148
|||||||||| || |||||||| || |||| || || ||||| ||||| ||||| ||||
Sbjct: 34 agttctaccttcgttactacgtaggtcacagaggtaaattcggtcacgaattcctggagt 93
Query: 149 tcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgaca 208
|||||||||| || || ||||||||||| |||||||||||||| |||||||| |||||||
Sbjct: 94 tcgagttccgtccagatggcaagctccgatacgccaacaactctaactacaaaaacgaca 153
Query: 209 ccatgatccgcaaggaggtcttcgtctccccctccgtcct 248
||||||| ||||| || |||||| | ||||| |||||||
Sbjct: 154 ccatgattcgcaaagaagtcttccttacccccgccgtcct 193
>gb|CN550020.1|CN550020 GQ0244.B3_O09 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0244_O09 5', mRNA sequence
Length = 699
Score = 127 bits (64), Expect = 8e-028
Identities = 136/160 (85%)
Strand = Plus / Plus
Query: 89 agttctacctgcggtactacgtggggcacaagggcaagttcgggcacgagttcctcgagt 148
|||||||||| || |||||||| || |||| || || ||||| ||||| ||||| ||||
Sbjct: 61 agttctaccttcgttactacgtaggtcacagaggtaaattcggtcacgaattcctggagt 120
Query: 149 tcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgaca 208
|||||||||| || || ||||||||||| |||||||||||||| |||||||| |||||||
Sbjct: 121 tcgagttccgtccagatggcaagctccgatacgccaacaactctaactacaaaaacgaca 180
Query: 209 ccatgatccgcaaggaggtcttcgtctccccctccgtcct 248
||||||| ||||| || |||||| | ||||| |||||||
Sbjct: 181 ccatgattcgcaaagaagtcttccttacccccgccgtcct 220
Score = 44.1 bits (22), Expect = 0.010
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 439 atcttctactacctcgtccaggatctgaagtgcttcgtgttttcactcatcaacctccac 498
|||||||| || || |||||||| |||||||||| || || || |||||| ||||||
Sbjct: 411 atcttctattatcttgtccaggacttgaagtgctttgttttctctctcatctctctccac 470
Query: 499 ttcaagatcaagcc 512
||||| ||||||||
Sbjct: 471 ttcaaaatcaagcc 484
>gb|CV239377.1|CV239377 WS0232.B21_D10 PT-MB-A-13 Populus trichocarpa cDNA clone WS0232_D10
3', mRNA sequence
Length = 764
Score = 127 bits (64), Expect = 8e-028
Identities = 136/160 (85%)
Strand = Plus / Minus
Query: 89 agttctacctgcggtactacgtggggcacaagggcaagttcgggcacgagttcctcgagt 148
|||||||||| || |||||||| || |||| || || ||||| ||||| ||||| ||||
Sbjct: 713 agttctaccttcgttactacgtaggtcacagaggtaaattcggtcacgaattcctggagt 654
Query: 149 tcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgaca 208
|||||||||| || || ||||||||||| |||||||||||||| |||||||| |||||||
Sbjct: 653 tcgagttccgtccagatggcaagctccgatacgccaacaactctaactacaaaaacgaca 594
Query: 209 ccatgatccgcaaggaggtcttcgtctccccctccgtcct 248
||||||| ||||| || |||||| | ||||| |||||||
Sbjct: 593 ccatgattcgcaaagaagtcttccttacccccgccgtcct 554
Score = 44.1 bits (22), Expect = 0.010
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 439 atcttctactacctcgtccaggatctgaagtgcttcgtgttttcactcatcaacctccac 498
|||||||| || || |||||||| |||||||||| || || || |||||| ||||||
Sbjct: 363 atcttctattatcttgtccaggacttgaagtgctttgttttctctctcatctctctccac 304
Query: 499 ttcaagatcaagcc 512
||||| ||||||||
Sbjct: 303 ttcaaaatcaagcc 290
>gb|CV257965.1|CV257965 WS0248.B21_C10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0248_C10 3', mRNA sequence
Length = 782
Score = 127 bits (64), Expect = 8e-028
Identities = 136/160 (85%)
Strand = Plus / Minus
Query: 89 agttctacctgcggtactacgtggggcacaagggcaagttcgggcacgagttcctcgagt 148
|||||||||| || |||||||| || |||| || || ||||| ||||| ||||| ||||
Sbjct: 745 agttctaccttcgttactacgtaggtcacagaggtaaattcggtcacgaattcctggagt 686
Query: 149 tcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgaca 208
|||||||||| || || ||||||||||| |||||||||||||| |||||||| |||||||
Sbjct: 685 tcgagttccgtccagatggcaagctccgatacgccaacaactctaactacaaaaacgaca 626
Query: 209 ccatgatccgcaaggaggtcttcgtctccccctccgtcct 248
||||||| ||||| || |||||| | ||||| |||||||
Sbjct: 625 ccatgattcgcaaagaagtcttccttacccccgccgtcct 586
Score = 44.1 bits (22), Expect = 0.010
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 439 atcttctactacctcgtccaggatctgaagtgcttcgtgttttcactcatcaacctccac 498
|||||||| || || |||||||| |||||||||| || || || |||||| ||||||
Sbjct: 395 atcttctattatcttgtccaggacttgaagtgctttgttttctctctcatctctctccac 336
Query: 499 ttcaagatcaagcc 512
||||| ||||||||
Sbjct: 335 ttcaaaatcaagcc 322
>gb|CV268022.1|CV268022 WS0204.B21_F12 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0204_F12 3', mRNA sequence
Length = 788
Score = 127 bits (64), Expect = 8e-028
Identities = 136/160 (85%)
Strand = Plus / Minus
Query: 89 agttctacctgcggtactacgtggggcacaagggcaagttcgggcacgagttcctcgagt 148
|||||||||| || |||||||| || |||| || || ||||| ||||| ||||| ||||
Sbjct: 779 agttctaccttcgttactacgtaggtcacagaggtaaattcggtcacgaattcctggagt 720
Query: 149 tcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgaca 208
|||||||||| || || ||||||||||| |||||||||||||| |||||||| |||||||
Sbjct: 719 tcgagttccgtccagatggcaagctccgatacgccaacaactctaactacaaaaacgaca 660
Query: 209 ccatgatccgcaaggaggtcttcgtctccccctccgtcct 248
||||||| ||||| || |||||| | ||||| |||||||
Sbjct: 659 ccatgattcgcaaagaagtcttccttacccccgccgtcct 620
>gb|CV270274.1|CV270274 WS0151.B21_I22 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0151_I22 3', mRNA sequence
Length = 774
Score = 127 bits (64), Expect = 8e-028
Identities = 136/160 (85%)
Strand = Plus / Minus
Query: 89 agttctacctgcggtactacgtggggcacaagggcaagttcgggcacgagttcctcgagt 148
|||||||||| || |||||||| || |||| || || ||||| ||||| ||||| ||||
Sbjct: 736 agttctaccttcgttactacgtaggtcacagaggtaaattcggtcacgaattcctggagt 677
Query: 149 tcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgaca 208
|||||||||| || || ||||||||||| |||||||||||||| |||||||| |||||||
Sbjct: 676 tcgagttccgtccagatggcaagctccgatacgccaacaactctaactacaaaaacgaca 617
Query: 209 ccatgatccgcaaggaggtcttcgtctccccctccgtcct 248
||||||| ||||| || |||||| | ||||| |||||||
Sbjct: 616 ccatgattcgcaaagaagtcttccttacccccgccgtcct 577
Score = 44.1 bits (22), Expect = 0.010
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 439 atcttctactacctcgtccaggatctgaagtgcttcgtgttttcactcatcaacctccac 498
|||||||| || || |||||||| |||||||||| || || || |||||| ||||||
Sbjct: 386 atcttctattatcttgtccaggacttgaagtgctttgttttctctctcatctctctccac 327
Query: 499 ttcaagatcaagcc 512
||||| ||||||||
Sbjct: 326 ttcaaaatcaagcc 313
>gb|CX658618.1|CX658618 PO01020C01 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01020C01 5', mRNA sequence
Length = 587
Score = 127 bits (64), Expect = 8e-028
Identities = 136/160 (85%)
Strand = Plus / Plus
Query: 89 agttctacctgcggtactacgtggggcacaagggcaagttcgggcacgagttcctcgagt 148
|||||||||| || |||||||| || |||| || || ||||| ||||| ||||| ||||
Sbjct: 45 agttctaccttcgttactacgtaggtcacagaggtaaattcggtcacgaattcctggagt 104
Query: 149 tcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgaca 208
|||||||||| || || ||||||||||| |||||||||||||| |||||||| |||||||
Sbjct: 105 tcgagttccgtccagatggcaagctccgatacgccaacaactctaactacaaaaacgaca 164
Query: 209 ccatgatccgcaaggaggtcttcgtctccccctccgtcct 248
||||||| ||||| || |||||| | ||||| |||||||
Sbjct: 165 ccatgattcgcaaagaagtcttccttacccccgccgtcct 204
Score = 44.1 bits (22), Expect = 0.010
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 439 atcttctactacctcgtccaggatctgaagtgcttcgtgttttcactcatcaacctccac 498
|||||||| || || |||||||| |||||||||| || || || |||||| ||||||
Sbjct: 395 atcttctattatcttgtccaggacttgaagtgctttgttttctctctcatctctctccac 454
Query: 499 ttcaagatcaagcc 512
||||| ||||||||
Sbjct: 455 ttcaaaatcaagcc 468
>gb|CX660139.1|CX660139 PO01018E03 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01018E03 5', mRNA sequence
Length = 727
Score = 127 bits (64), Expect = 8e-028
Identities = 136/160 (85%)
Strand = Plus / Plus
Query: 89 agttctacctgcggtactacgtggggcacaagggcaagttcgggcacgagttcctcgagt 148
|||||||||| || |||||||| || |||| || || ||||| ||||| ||||| ||||
Sbjct: 45 agttctaccttcgttactacgtaggtcacagaggtaaattcggtcacgaattcctggagt 104
Query: 149 tcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgaca 208
|||||||||| || || ||||||||||| |||||||||||||| |||||||| |||||||
Sbjct: 105 tcgagttccgtccagatggcaagctccgatacgccaacaactctaactacaaaaacgaca 164
Query: 209 ccatgatccgcaaggaggtcttcgtctccccctccgtcct 248
||||||| ||||| || |||||| | ||||| |||||||
Sbjct: 165 ccatgattcgcaaagaagtcttccttacccccgccgtcct 204
Score = 44.1 bits (22), Expect = 0.010
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 439 atcttctactacctcgtccaggatctgaagtgcttcgtgttttcactcatcaacctccac 498
|||||||| || || |||||||| |||||||||| || || || |||||| ||||||
Sbjct: 395 atcttctattatcttgtccaggacttgaagtgctttgttttctctctcatctctctccac 454
Query: 499 ttcaagatcaagcc 512
||||| ||||||||
Sbjct: 455 ttcaaaatcaagcc 468
>gb|DT488453.1|DT488453 WS02536.B21_H15 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02536_H15 3', mRNA sequence
Length = 799
Score = 127 bits (64), Expect = 8e-028
Identities = 136/160 (85%)
Strand = Plus / Minus
Query: 89 agttctacctgcggtactacgtggggcacaagggcaagttcgggcacgagttcctcgagt 148
|||||||||| || |||||||| || |||| || || ||||| ||||| ||||| ||||
Sbjct: 737 agttctaccttcgttactacgtaggtcacagaggtaaattcggtcacgaattcctggagt 678
Query: 149 tcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgaca 208
|||||||||| || || ||||||||||| |||||||||||||| |||||||| |||||||
Sbjct: 677 tcgagttccgtccagatggcaagctccgatacgccaacaactctaactacaaaaacgaca 618
Query: 209 ccatgatccgcaaggaggtcttcgtctccccctccgtcct 248
||||||| ||||| || |||||| | ||||| |||||||
Sbjct: 617 ccatgattcgcaaagaagtcttccttacccccgccgtcct 578
Score = 44.1 bits (22), Expect = 0.010
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 439 atcttctactacctcgtccaggatctgaagtgcttcgtgttttcactcatcaacctccac 498
|||||||| || || |||||||| |||||||||| || || || |||||| ||||||
Sbjct: 387 atcttctattatcttgtccaggacttgaagtgctttgttttctctctcatctctctccac 328
Query: 499 ttcaagatcaagcc 512
||||| ||||||||
Sbjct: 327 ttcaaaatcaagcc 314
>gb|DT490426.1|DT490426 WS02544.B21_O23 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02544_O23 3', mRNA sequence
Length = 730
Score = 127 bits (64), Expect = 8e-028
Identities = 136/160 (85%)
Strand = Plus / Minus
Query: 89 agttctacctgcggtactacgtggggcacaagggcaagttcgggcacgagttcctcgagt 148
|||||||||| || |||||||| || |||| || || ||||| ||||| ||||| ||||
Sbjct: 701 agttctaccttcgttactacgtaggtcacagaggtaaattcggtcacgaattcctggagt 642
Query: 149 tcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgaca 208
|||||||||| || || ||||||||||| |||||||||||||| |||||||| |||||||
Sbjct: 641 tcgagttccgtccagatggcaagctccgatacgccaacaactctaactacaaaaacgaca 582
Query: 209 ccatgatccgcaaggaggtcttcgtctccccctccgtcct 248
||||||| ||||| || |||||| | ||||| |||||||
Sbjct: 581 ccatgattcgcaaagaagtcttccttacccccgccgtcct 542
Score = 44.1 bits (22), Expect = 0.010
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 439 atcttctactacctcgtccaggatctgaagtgcttcgtgttttcactcatcaacctccac 498
|||||||| || || |||||||| |||||||||| || || || |||||| ||||||
Sbjct: 351 atcttctattatcttgtccaggacttgaagtgctttgttttctctctcatctctctccac 292
Query: 499 ttcaagatcaagcc 512
||||| ||||||||
Sbjct: 291 ttcaaaatcaagcc 278
>gb|DT492391.1|DT492391 WS02550.C21_J07 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02550_J07 3', mRNA sequence
Length = 683
Score = 127 bits (64), Expect = 8e-028
Identities = 136/160 (85%)
Strand = Plus / Minus
Query: 89 agttctacctgcggtactacgtggggcacaagggcaagttcgggcacgagttcctcgagt 148
|||||||||| || |||||||| || |||| || || ||||| ||||| ||||| ||||
Sbjct: 639 agttctaccttcgttactacgtaggtcacagaggtaaattcggtcacgaattcctggagt 580
Query: 149 tcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgaca 208
|||||||||| || || ||||||||||| |||||||||||||| |||||||| |||||||
Sbjct: 579 tcgagttccgtccagatggcaagctccgatacgccaacaactctaactacaaaaacgaca 520
Query: 209 ccatgatccgcaaggaggtcttcgtctccccctccgtcct 248
||||||| ||||| || |||||| | ||||| |||||||
Sbjct: 519 ccatgattcgcaaagaagtcttccttacccccgccgtcct 480
>gb|DT505387.1|DT505387 WS01810.C21_M15 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS01810_M15 3', mRNA sequence
Length = 760
Score = 127 bits (64), Expect = 8e-028
Identities = 136/160 (85%)
Strand = Plus / Minus
Query: 89 agttctacctgcggtactacgtggggcacaagggcaagttcgggcacgagttcctcgagt 148
|||||||||| || |||||||| || |||| || || ||||| ||||| ||||| ||||
Sbjct: 723 agttctaccttcgttactacgtaggtcacagaggtaaattcggtcacgaattcctggagt 664
Query: 149 tcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgaca 208
|||||||||| || || ||||||||||| |||||||||||||| |||||||| |||||||
Sbjct: 663 tcgagttccgtccagatggcaagctccgatacgccaacaactctaactacaaaaacgaca 604
Query: 209 ccatgatccgcaaggaggtcttcgtctccccctccgtcct 248
||||||| ||||| || |||||| | ||||| |||||||
Sbjct: 603 ccatgattcgcaaagaagtcttccttacccccgccgtcct 564
>gb|BI131177.1|BI131177 G116P53Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 445
Score = 119 bits (60), Expect = 2e-025
Identities = 135/160 (84%)
Strand = Plus / Plus
Query: 89 agttctacctgcggtactacgtggggcacaagggcaagttcgggcacgagttcctcgagt 148
||||| |||| || |||||||| || |||| || || ||||| ||||| ||||| ||||
Sbjct: 18 agttcgaccttcgttactacgtaggtcacagaggtaaattcggtcacgaattcctggagt 77
Query: 149 tcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgaca 208
|||||||||| || || ||||||||||| |||||||||||||| |||||||| |||||||
Sbjct: 78 tcgagttccgtccagatggcaagctccgatacgccaacaactctaactacaaaaacgaca 137
Query: 209 ccatgatccgcaaggaggtcttcgtctccccctccgtcct 248
||||||| ||||| || |||||| | ||||| |||||||
Sbjct: 138 ccatgattcgcaaagaagtcttccttacccccgccgtcct 177
Score = 44.1 bits (22), Expect = 0.010
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 439 atcttctactacctcgtccaggatctgaagtgcttcgtgttttcactcatcaacctccac 498
|||||||| || || |||||||| |||||||||| || || || |||||| ||||||
Sbjct: 370 atcttctattatcttgtccaggacttgaagtgctttgttttctctctcatctctctccac 429
Query: 499 ttcaagatcaagcc 512
||||| ||||||||
Sbjct: 430 ttcaaaatcaagcc 443
>gb|CV268026.1|CV268026 WS0204.B21_F16 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0204_F16 3', mRNA sequence
Length = 792
Score = 119 bits (60), Expect = 2e-025
Identities = 135/160 (84%)
Strand = Plus / Minus
Query: 89 agttctacctgcggtactacgtggggcacaagggcaagttcgggcacgagttcctcgagt 148
|||||||||| || |||||||| || |||| || || ||||| ||||| ||||| ||||
Sbjct: 779 agttctaccttcgttactacgtaggtcacagaggtaaattcggtcacgaattcctggagt 720
Query: 149 tcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgaca 208
|||||||||| || || ||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 719 tcgagttccgtccagatggcaagctccgatacgccaacaactctaactacaaaaacgacc 660
Query: 209 ccatgatccgcaaggaggtcttcgtctccccctccgtcct 248
||||||| ||||| || |||||| | ||||| |||||||
Sbjct: 659 ccatgattcgcaaagaagtcttccttacccccgccgtcct 620
>gb|CB240357.1|CB240357 PopSC00336 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PopSC00336, mRNA sequence
Length = 445
Score = 115 bits (58), Expect = 3e-024
Identities = 106/122 (86%)
Strand = Plus / Plus
Query: 127 ttcgggcacgagttcctcgagttcgagttccgccccgacggcaagctccgctacgccaac 186
||||| ||||| ||||| |||||||||||||| || || ||||||||||| |||||||||
Sbjct: 2 ttcggtcacgaattcctggagttcgagttccgtccagatggcaagctccgatacgccaac 61
Query: 187 aactccaactacaagaacgacaccatgatccgcaaggaggtcttcgtctccccctccgtc 246
||||| |||||||| |||||||||||||| ||||| || |||||| | ||||| |||||
Sbjct: 62 aactctaactacaaaaacgacaccatgattcgcaaagaagtcttccttacccccgccgtc 121
Query: 247 ct 248
||
Sbjct: 122 ct 123
>gb|CV269179.1|CV269179 WS0207.B21_I16 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0207_I16 3', mRNA sequence
Length = 719
Score = 115 bits (58), Expect = 3e-024
Identities = 106/122 (86%)
Strand = Plus / Minus
Query: 127 ttcgggcacgagttcctcgagttcgagttccgccccgacggcaagctccgctacgccaac 186
||||| ||||| ||||| |||||||||||||| || || ||||||||||| |||||||||
Sbjct: 698 ttcggtcacgaattcctggagttcgagttccgtccagatggcaagctccgatacgccaac 639
Query: 187 aactccaactacaagaacgacaccatgatccgcaaggaggtcttcgtctccccctccgtc 246
||||| |||||||| |||||||||||||| ||||| || |||||| | ||||| |||||
Sbjct: 638 aactctaactacaaaaacgacaccatgattcgcaaagaagtcttccttacccccgccgtc 579
Query: 247 ct 248
||
Sbjct: 578 ct 577
Score = 44.1 bits (22), Expect = 0.010
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 439 atcttctactacctcgtccaggatctgaagtgcttcgtgttttcactcatcaacctccac 498
|||||||| || || |||||||| |||||||||| || || || |||||| ||||||
Sbjct: 386 atcttctattatcttgtccaggacttgaagtgctttgttttctctctcatctctctccac 327
Query: 499 ttcaagatcaagcc 512
||||| ||||||||
Sbjct: 326 ttcaaaatcaagcc 313
>gb|DT490352.1|DT490352 WS02544.B21_L15 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02544_L15 3', mRNA sequence
Length = 731
Score = 115 bits (58), Expect = 3e-024
Identities = 106/122 (86%)
Strand = Plus / Minus
Query: 127 ttcgggcacgagttcctcgagttcgagttccgccccgacggcaagctccgctacgccaac 186
||||| ||||| ||||| |||||||||||||| || || ||||||||||| |||||||||
Sbjct: 704 ttcggtcacgaattcctggagttcgagttccgtccagatggcaagctccgatacgccaac 645
Query: 187 aactccaactacaagaacgacaccatgatccgcaaggaggtcttcgtctccccctccgtc 246
||||| |||||||| |||||||||||||| ||||| || |||||| | ||||| |||||
Sbjct: 644 aactctaactacaaaaacgacaccatgattcgcaaagaagtcttccttacccccgccgtc 585
Query: 247 ct 248
||
Sbjct: 584 ct 583
Score = 44.1 bits (22), Expect = 0.010
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 439 atcttctactacctcgtccaggatctgaagtgcttcgtgttttcactcatcaacctccac 498
|||||||| || || |||||||| |||||||||| || || || |||||| ||||||
Sbjct: 392 atcttctattatcttgtccaggacttgaagtgctttgttttctctctcatctctctccac 333
Query: 499 ttcaagatcaagcc 512
||||| ||||||||
Sbjct: 332 ttcaaaatcaagcc 319
>gb|CK093269.1|CK093269 G113P83.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G113P83 3', mRNA sequence
Length = 764
Score = 113 bits (57), Expect = 1e-023
Identities = 136/161 (84%), Gaps = 1/161 (0%)
Strand = Plus / Minus
Query: 89 agttctacctgcggtactacgtggggcacaagggcaagttcgggcacgagttcctcgagt 148
|||||||||| || |||||||| || |||| || || ||||| ||||| ||||| ||||
Sbjct: 738 agttctaccttcgttactacgtaggtcacagaggtaaattcggtcacgaattcctggagt 679
Query: 149 tcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacga-c 207
|||||||||| || || ||||||||||| |||||||||||||| |||||||| ||||| |
Sbjct: 678 tcgagttccgtccagatggcaagctccgatacgccaacaactctaactacaaaaacgacc 619
Query: 208 accatgatccgcaaggaggtcttcgtctccccctccgtcct 248
|||||||| ||||| || |||||| | ||||| |||||||
Sbjct: 618 accatgattcgcaaagaagtcttccttacccccgccgtcct 578
Score = 44.1 bits (22), Expect = 0.010
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 439 atcttctactacctcgtccaggatctgaagtgcttcgtgttttcactcatcaacctccac 498
|||||||| || || |||||||| |||||||||| || || || |||||| ||||||
Sbjct: 387 atcttctattatcttgtccaggacttgaagtgctttgttttctctctcatctctctccac 328
Query: 499 ttcaagatcaagcc 512
||||| ||||||||
Sbjct: 327 ttcaaaatcaagcc 314
>gb|BU873007.1|BU873007 Q050B05 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 446
Score = 99.6 bits (50), Expect = 2e-019
Identities = 77/86 (89%)
Strand = Plus / Plus
Query: 145 gagttcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaac 204
|||||||||||||| || || ||||||||||| |||||||||||||| |||||||| |||
Sbjct: 54 gagttcgagttccgtccagatggcaagctccgatacgccaacaactctaactacaaaaac 113
Query: 205 gacaccatgatccgcaaggaggtctt 230
||||||||||| ||||| || |||||
Sbjct: 114 gacaccatgattcgcaaagaagtctt 139
>gb|AI165103.1|AI165103 A075p26u Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 266
Score = 65.9 bits (33), Expect = 3e-009
Identities = 103/127 (81%)
Strand = Plus / Plus
Query: 89 agttctacctgcggtactacgtggggcacaagggcaagttcgggcacgagttcctcgagt 148
||||||| || || |||||||| || |||| || || ||||| ||||| ||| | || |
Sbjct: 13 agttctatcttcgttactacgttggtcacagaggnaaattcggncacgaattcttggaat 72
Query: 149 tcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgaca 208
|||||||||| || || || || ||||| ||||| |||||||| || ||||| |||||||
Sbjct: 73 tcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgaca 132
Query: 209 ccatgat 215
|||||||
Sbjct: 133 ccatgat 139
>gb|AI164690.1|AI164690 A067P26U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 412
Score = 63.9 bits (32), Expect = 1e-008
Identities = 103/127 (81%)
Strand = Plus / Plus
Query: 89 agttctacctgcggtactacgtggggcacaagggcaagttcgggcacgagttcctcgagt 148
||||||| || || |||||||| || |||| || || ||||| ||||| ||| | || |
Sbjct: 44 agttctatcttcgntactacgttggtcacagaggtaaattcggtcacgaattcttggaat 103
Query: 149 tcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgaca 208
|||||||||| || || || || ||||| ||||| |||||||| || ||||| |||||||
Sbjct: 104 tcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgaca 163
Query: 209 ccatgat 215
|||||||
Sbjct: 164 ccatgat 170
>gb|BI135651.1|BI135651 F056P40Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 570
Score = 61.9 bits (31), Expect = 4e-008
Identities = 103/127 (81%)
Strand = Plus / Plus
Query: 89 agttctacctgcggtactacgtggggcacaagggcaagttcgggcacgagttcctcgagt 148
||||||| || || |||||||| || |||| || || ||||| ||||| ||| | || |
Sbjct: 6 agttctatcttcgttactacgttggtcacagaggtaaattcggtcacgaattcttggaat 65
Query: 149 tcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgaca 208
|||||||||| || || || || ||||| ||||| |||||||| || ||||| |||||||
Sbjct: 66 tcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgaca 125
Query: 209 ccatgat 215
|||||||
Sbjct: 126 ccatgat 132
Score = 44.1 bits (22), Expect = 0.010
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 439 atcttctactacctcgtccaggatctgaagtgcttcgtgttttcactcatcaacctccac 498
|||||||| || || || ||||| |||||||||| || || || |||||| |||||||
Sbjct: 356 atcttctattatcttgttcaggacttgaagtgctttgttttctctctcatctccctccac 415
Query: 499 ttcaagatcaagcc 512
||||| ||||||||
Sbjct: 416 ttcaaaatcaagcc 429
>gb|CA824755.1|CA824755 R47H01 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 292
Score = 61.9 bits (31), Expect = 4e-008
Identities = 103/127 (81%)
Strand = Plus / Plus
Query: 89 agttctacctgcggtactacgtggggcacaagggcaagttcgggcacgagttcctcgagt 148
||||||| || || |||||||| || |||| || || ||||| ||||| ||| | || |
Sbjct: 42 agttctatcttcgttactacgttggtcacagaggtaaattcggtcacgaattcttggaat 101
Query: 149 tcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgaca 208
|||||||||| || || || || ||||| ||||| |||||||| || ||||| |||||||
Sbjct: 102 tcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgaca 161
Query: 209 ccatgat 215
|||||||
Sbjct: 162 ccatgat 168
>gb|CN520341.1|CN520341 GQ0107.B3_N20 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0107_N20 5', mRNA sequence
Length = 771
Score = 61.9 bits (31), Expect = 4e-008
Identities = 103/127 (81%)
Strand = Plus / Plus
Query: 89 agttctacctgcggtactacgtggggcacaagggcaagttcgggcacgagttcctcgagt 148
||||||| || || |||||||| || |||| || || ||||| ||||| ||| | || |
Sbjct: 61 agttctatcttcgttactacgttggtcacagaggtaaattcggtcacgaattcttggaat 120
Query: 149 tcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgaca 208
|||||||||| || || || || ||||| ||||| |||||||| || ||||| |||||||
Sbjct: 121 tcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgaca 180
Query: 209 ccatgat 215
|||||||
Sbjct: 181 ccatgat 187
>gb|CV275354.1|CV275354 WS0176.B21_D04 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0176_D04 3', mRNA sequence
Length = 757
Score = 61.9 bits (31), Expect = 4e-008
Identities = 103/127 (81%)
Strand = Plus / Minus
Query: 89 agttctacctgcggtactacgtggggcacaagggcaagttcgggcacgagttcctcgagt 148
||||||| || || |||||||| || |||| || || ||||| ||||| ||| | || |
Sbjct: 732 agttctatcttcgttactacgttggtcacagaggtaaattcggtcacgaattcttggaat 673
Query: 149 tcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgaca 208
|||||||||| || || || || ||||| ||||| |||||||| || ||||| |||||||
Sbjct: 672 tcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgaca 613
Query: 209 ccatgat 215
|||||||
Sbjct: 612 ccatgat 606
>gb|CX653837.1|CX653837 PO02007H08 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02007H08 5', mRNA sequence
Length = 385
Score = 61.9 bits (31), Expect = 4e-008
Identities = 103/127 (81%)
Strand = Plus / Plus
Query: 89 agttctacctgcggtactacgtggggcacaagggcaagttcgggcacgagttcctcgagt 148
||||||| || || |||||||| || |||| || || ||||| ||||| ||| | || |
Sbjct: 55 agttctatcttcgttactacgttggtcacagaggtaaattcggtcacgaattcttggaat 114
Query: 149 tcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgaca 208
|||||||||| || || || || ||||| ||||| |||||||| || ||||| |||||||
Sbjct: 115 tcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgaca 174
Query: 209 ccatgat 215
|||||||
Sbjct: 175 ccatgat 181
>gb|CX655835.1|CX655835 PO02040G06 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02040G06 5', mRNA sequence
Length = 230
Score = 61.9 bits (31), Expect = 4e-008
Identities = 103/127 (81%)
Strand = Plus / Plus
Query: 89 agttctacctgcggtactacgtggggcacaagggcaagttcgggcacgagttcctcgagt 148
||||||| || || |||||||| || |||| || || ||||| ||||| ||| | || |
Sbjct: 3 agttctatcttcgttactacgttggtcacagaggtaaattcggtcacgaattcttggaat 62
Query: 149 tcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgaca 208
|||||||||| || || || || ||||| ||||| |||||||| || ||||| |||||||
Sbjct: 63 tcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgaca 122
Query: 209 ccatgat 215
|||||||
Sbjct: 123 ccatgat 129
>gb|CX658163.1|CX658163 PO01010E03 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01010E03 5', mRNA sequence
Length = 307
Score = 61.9 bits (31), Expect = 4e-008
Identities = 103/127 (81%)
Strand = Plus / Plus
Query: 89 agttctacctgcggtactacgtggggcacaagggcaagttcgggcacgagttcctcgagt 148
||||||| || || |||||||| || |||| || || ||||| ||||| ||| | || |
Sbjct: 42 agttctatcttcgttactacgttggtcacagaggtaaattcggtcacgaattcttggaat 101
Query: 149 tcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgaca 208
|||||||||| || || || || ||||| ||||| |||||||| || ||||| |||||||
Sbjct: 102 tcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgaca 161
Query: 209 ccatgat 215
|||||||
Sbjct: 162 ccatgat 168
>gb|DT494631.1|DT494631 WS01118.BR.1_P22 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01118_P22 5', mRNA sequence
Length = 824
Score = 61.9 bits (31), Expect = 4e-008
Identities = 103/127 (81%)
Strand = Plus / Plus
Query: 89 agttctacctgcggtactacgtggggcacaagggcaagttcgggcacgagttcctcgagt 148
||||||| || || |||||||| || |||| || || ||||| ||||| ||| | || |
Sbjct: 80 agttctatcttcgttactacgttggtcacagaggtaaattcggtcacgaattcttggaat 139
Query: 149 tcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgaca 208
|||||||||| || || || || ||||| ||||| |||||||| || ||||| |||||||
Sbjct: 140 tcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgaca 199
Query: 209 ccatgat 215
|||||||
Sbjct: 200 ccatgat 206
Score = 44.1 bits (22), Expect = 0.010
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 439 atcttctactacctcgtccaggatctgaagtgcttcgtgttttcactcatcaacctccac 498
|||||||| || || || ||||| |||||||||| || || || |||||| |||||||
Sbjct: 430 atcttctattatcttgttcaggacttgaagtgctttgttttctctctcatctccctccac 489
Query: 499 ttcaagatcaagcc 512
||||| ||||||||
Sbjct: 490 ttcaaaatcaagcc 503
>gb|DT496161.1|DT496161 WS01122.BR_J12 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01122_J12 5', mRNA sequence
Length = 764
Score = 61.9 bits (31), Expect = 4e-008
Identities = 103/127 (81%)
Strand = Plus / Plus
Query: 89 agttctacctgcggtactacgtggggcacaagggcaagttcgggcacgagttcctcgagt 148
||||||| || || |||||||| || |||| || || ||||| ||||| ||| | || |
Sbjct: 33 agttctatcttcgttactacgttggtcacagaggtaaattcggtcacgaattcttggaat 92
Query: 149 tcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgaca 208
|||||||||| || || || || ||||| ||||| |||||||| || ||||| |||||||
Sbjct: 93 tcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgaca 152
Query: 209 ccatgat 215
|||||||
Sbjct: 153 ccatgat 159
Score = 44.1 bits (22), Expect = 0.010
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 439 atcttctactacctcgtccaggatctgaagtgcttcgtgttttcactcatcaacctccac 498
|||||||| || || || ||||| |||||||||| || || || |||||| |||||||
Sbjct: 383 atcttctattatcttgttcaggacttgaagtgctttgttttctctctcatctccctccac 442
Query: 499 ttcaagatcaagcc 512
||||| ||||||||
Sbjct: 443 ttcaaaatcaagcc 456
>gb|DT496675.1|DT496675 WS01124.BR_B23 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01124_B23 5', mRNA sequence
Length = 824
Score = 61.9 bits (31), Expect = 4e-008
Identities = 103/127 (81%)
Strand = Plus / Plus
Query: 89 agttctacctgcggtactacgtggggcacaagggcaagttcgggcacgagttcctcgagt 148
||||||| || || |||||||| || |||| || || ||||| ||||| ||| | || |
Sbjct: 80 agttctatcttcgttactacgttggtcacagaggtaaattcggtcacgaattcttggaat 139
Query: 149 tcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgaca 208
|||||||||| || || || || ||||| ||||| |||||||| || ||||| |||||||
Sbjct: 140 tcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgaca 199
Query: 209 ccatgat 215
|||||||
Sbjct: 200 ccatgat 206
Score = 44.1 bits (22), Expect = 0.010
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 439 atcttctactacctcgtccaggatctgaagtgcttcgtgttttcactcatcaacctccac 498
|||||||| || || || ||||| |||||||||| || || || |||||| |||||||
Sbjct: 430 atcttctattatcttgttcaggacttgaagtgctttgttttctctctcatctccctccac 489
Query: 499 ttcaagatcaagcc 512
||||| ||||||||
Sbjct: 490 ttcaaaatcaagcc 503
>gb|DT499091.1|DT499091 WS0117.BR_E09 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0117_E09
5', mRNA sequence
Length = 542
Score = 61.9 bits (31), Expect = 4e-008
Identities = 103/127 (81%)
Strand = Plus / Plus
Query: 89 agttctacctgcggtactacgtggggcacaagggcaagttcgggcacgagttcctcgagt 148
||||||| || || |||||||| || |||| || || ||||| ||||| ||| | || |
Sbjct: 39 agttctatcttcgttactacgttggtcacagaggtaaattcggtcacgaattcttggaat 98
Query: 149 tcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgaca 208
|||||||||| || || || || ||||| ||||| |||||||| || ||||| |||||||
Sbjct: 99 tcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgaca 158
Query: 209 ccatgat 215
|||||||
Sbjct: 159 ccatgat 165
Score = 44.1 bits (22), Expect = 0.010
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 439 atcttctactacctcgtccaggatctgaagtgcttcgtgttttcactcatcaacctccac 498
|||||||| || || || ||||| |||||||||| || || || |||||| |||||||
Sbjct: 388 atcttctattatcttgttcaggacttgaagtgctttgttttctctctcatctccctccac 447
Query: 499 ttcaagatcaagcc 512
||||| ||||||||
Sbjct: 448 ttcaaaatcaagcc 461
>gb|DT501302.1|DT501302 WS01312.BR_E07 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01312_E07 5', mRNA sequence
Length = 598
Score = 61.9 bits (31), Expect = 4e-008
Identities = 103/127 (81%)
Strand = Plus / Plus
Query: 89 agttctacctgcggtactacgtggggcacaagggcaagttcgggcacgagttcctcgagt 148
||||||| || || |||||||| || |||| || || ||||| ||||| ||| | || |
Sbjct: 80 agttctatcttcgttactacgttggtcacagaggtaaattcggtcacgaattcttggaat 139
Query: 149 tcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgaca 208
|||||||||| || || || || ||||| ||||| |||||||| || ||||| |||||||
Sbjct: 140 tcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgaca 199
Query: 209 ccatgat 215
|||||||
Sbjct: 200 ccatgat 206
>gb|DT501617.1|DT501617 WS01313.BR_H19 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01313_H19 5', mRNA sequence
Length = 809
Score = 61.9 bits (31), Expect = 4e-008
Identities = 103/127 (81%)
Strand = Plus / Plus
Query: 89 agttctacctgcggtactacgtggggcacaagggcaagttcgggcacgagttcctcgagt 148
||||||| || || |||||||| || |||| || || ||||| ||||| ||| | || |
Sbjct: 80 agttctatcttcgttactacgttggtcacagaggtaaattcggtcacgaattcttggaat 139
Query: 149 tcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgaca 208
|||||||||| || || || || ||||| ||||| |||||||| || ||||| |||||||
Sbjct: 140 tcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgaca 199
Query: 209 ccatgat 215
|||||||
Sbjct: 200 ccatgat 206
>gb|DT501677.1|DT501677 WS01313.BR_M02 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01313_M02 5', mRNA sequence
Length = 809
Score = 61.9 bits (31), Expect = 4e-008
Identities = 103/127 (81%)
Strand = Plus / Plus
Query: 89 agttctacctgcggtactacgtggggcacaagggcaagttcgggcacgagttcctcgagt 148
||||||| || || |||||||| || |||| || || ||||| ||||| ||| | || |
Sbjct: 80 agttctatcttcgttactacgttggtcacagaggtaaattcggtcacgaattcttggaat 139
Query: 149 tcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgaca 208
|||||||||| || || || || ||||| ||||| |||||||| || ||||| |||||||
Sbjct: 140 tcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgaca 199
Query: 209 ccatgat 215
|||||||
Sbjct: 200 ccatgat 206
>gb|DT504166.1|DT504166 WS01312.B21_E07 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01312_E07 3', mRNA sequence
Length = 809
Score = 61.9 bits (31), Expect = 4e-008
Identities = 103/127 (81%)
Strand = Plus / Minus
Query: 89 agttctacctgcggtactacgtggggcacaagggcaagttcgggcacgagttcctcgagt 148
||||||| || || |||||||| || |||| || || ||||| ||||| ||| | || |
Sbjct: 730 agttctatcttcgttactacgttggtcacagaggtaaattcggtcacgaattcttggaat 671
Query: 149 tcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgaca 208
|||||||||| || || || || ||||| ||||| |||||||| || ||||| |||||||
Sbjct: 670 tcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgaca 611
Query: 209 ccatgat 215
|||||||
Sbjct: 610 ccatgat 604
>gb|DT504467.1|DT504467 WS01313.B21_H19 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01313_H19 3', mRNA sequence
Length = 809
Score = 61.9 bits (31), Expect = 4e-008
Identities = 103/127 (81%)
Strand = Plus / Minus
Query: 89 agttctacctgcggtactacgtggggcacaagggcaagttcgggcacgagttcctcgagt 148
||||||| || || |||||||| || |||| || || ||||| ||||| ||| | || |
Sbjct: 730 agttctatcttcgttactacgttggtcacagaggtaaattcggtcacgaattcttggaat 671
Query: 149 tcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgaca 208
|||||||||| || || || || ||||| ||||| |||||||| || ||||| |||||||
Sbjct: 670 tcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgaca 611
Query: 209 ccatgat 215
|||||||
Sbjct: 610 ccatgat 604
>gb|DT504537.1|DT504537 WS01313.B21_M02 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01313_M02 3', mRNA sequence
Length = 809
Score = 61.9 bits (31), Expect = 4e-008
Identities = 103/127 (81%)
Strand = Plus / Minus
Query: 89 agttctacctgcggtactacgtggggcacaagggcaagttcgggcacgagttcctcgagt 148
||||||| || || |||||||| || |||| || || ||||| ||||| ||| | || |
Sbjct: 730 agttctatcttcgttactacgttggtcacagaggtaaattcggtcacgaattcttggaat 671
Query: 149 tcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgaca 208
|||||||||| || || || || ||||| ||||| |||||||| || ||||| |||||||
Sbjct: 670 tcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgaca 611
Query: 209 ccatgat 215
|||||||
Sbjct: 610 ccatgat 604
>gb|AI165025.1|AI165025 A073p46u Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 315
Score = 58.0 bits (29), Expect = 7e-007
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 127 ttcgggcacgagttcctcgagttcgagttccgccccgacggcaagctccgctacgccaac 186
||||| ||||| ||| | || ||||||||||| || || || || ||||| ||||| |||
Sbjct: 18 ttcggtcacgaattcttggaattcgagttccggcctgatggaaaactccgatacgcaaac 77
Query: 187 aactccaactacaagaacgacaccatgat 215
||||| || ||||| ||||||||||||||
Sbjct: 78 aactctaattacaaaaacgacaccatgat 106
>gb|BI136108.1|BI136108 F063P45Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 481
Score = 58.0 bits (29), Expect = 7e-007
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 127 ttcgggcacgagttcctcgagttcgagttccgccccgacggcaagctccgctacgccaac 186
||||| ||||| ||| | || ||||||||||| || || || || ||||| ||||| |||
Sbjct: 34 ttcggtcacgaattcttggaattcgagttccggcctgatggaaaactccgatacgcaaac 93
Query: 187 aactccaactacaagaacgacaccatgat 215
||||| || ||||| ||||||||||||||
Sbjct: 94 aactctaattacaaaaacgacaccatgat 122
Score = 44.1 bits (22), Expect = 0.010
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 439 atcttctactacctcgtccaggatctgaagtgcttcgtgttttcactcatcaacctccac 498
|||||||| || || || ||||| |||||||||| || || || |||||| |||||||
Sbjct: 346 atcttctattatcttgttcaggacttgaagtgctttgtattctctctcatctccctccac 405
Query: 499 ttcaagatcaagcc 512
||||| ||||||||
Sbjct: 406 ttcaaaatcaagcc 419
>gb|CA822753.1|CA822753 R13C07 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 269
Score = 58.0 bits (29), Expect = 7e-007
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 127 ttcgggcacgagttcctcgagttcgagttccgccccgacggcaagctccgctacgccaac 186
||||| ||||| ||| | || ||||||||||| || || || || ||||| ||||| |||
Sbjct: 45 ttcggtcacgaattcttggaattcgagttccggcctgatggaaaactccgatacgcaaac 104
Query: 187 aactccaactacaagaacgacaccatgat 215
||||| || ||||| ||||||||||||||
Sbjct: 105 aactctaattacaaaaacgacaccatgat 133
>gb|CX653937.1|CX653937 PO02010B08 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02010B08 5', mRNA sequence
Length = 630
Score = 58.0 bits (29), Expect = 7e-007
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 127 ttcgggcacgagttcctcgagttcgagttccgccccgacggcaagctccgctacgccaac 186
||||| ||||| ||| | || ||||||||||| || || || || ||||| ||||| |||
Sbjct: 73 ttcggtcacgaattcttggaattcgagttccggcctgatggaaaactccgatacgcaaac 132
Query: 187 aactccaactacaagaacgacaccatgat 215
||||| || ||||| ||||||||||||||
Sbjct: 133 aactctaattacaaaaacgacaccatgat 161
>gb|AI165639.1|AI165639 A087p56u Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 333
Score = 56.0 bits (28), Expect = 3e-006
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 148 ttcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgac 207
||||||||||| || || || || ||||| ||||| |||||||| || ||||| ||||||
Sbjct: 7 ttcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgac 66
Query: 208 accatgat 215
||||||||
Sbjct: 67 accatgat 74
>gb|CA930093.1|CA930093 MTU2CA.P7.A03 Aspen apex cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 664
Score = 56.0 bits (28), Expect = 3e-006
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 148 ttcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgac 207
||||||||||| || || || || ||||| ||||| |||||||| || ||||| ||||||
Sbjct: 652 ttcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgac 593
Query: 208 accatgat 215
||||||||
Sbjct: 592 accatgat 585
>gb|CN522355.1|CN522355 GQ0124.B3_G19 GQ012 Populus trichocarpa x Populus deltoides cDNA
clone GQ0124_G19 5', mRNA sequence
Length = 472
Score = 56.0 bits (28), Expect = 3e-006
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 148 ttcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgac 207
||||||||||| || || || || ||||| ||||| |||||||| || ||||| ||||||
Sbjct: 13 ttcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgac 72
Query: 208 accatgat 215
||||||||
Sbjct: 73 accatgat 80
>gb|CV281945.1|CV281945 WS0183.B21_E20 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0183_E20 3', mRNA sequence
Length = 884
Score = 56.0 bits (28), Expect = 3e-006
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 185 acaactccaactacaagaacgacaccatgatccgcaaggaggtcttcgtctccccctccg 244
||||||| |||||||| |||||||||||||| ||||| || |||||| | ||||| |||
Sbjct: 884 acaactctaactacaaaaacgacaccatgattcgcaaagaagtcttccttacccccgccg 825
Query: 245 tcct 248
||||
Sbjct: 824 tcct 821
Score = 44.1 bits (22), Expect = 0.010
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 439 atcttctactacctcgtccaggatctgaagtgcttcgtgttttcactcatcaacctccac 498
|||||||| || || |||||||| |||||||||| || || || |||||| ||||||
Sbjct: 630 atcttctattatcttgtccaggacttgaagtgctttgttttctctctcatctctctccac 571
Query: 499 ttcaagatcaagcc 512
||||| ||||||||
Sbjct: 570 ttcaaaatcaagcc 557
>gb|BI135591.1|BI135591 F055P16Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 391
Score = 54.0 bits (27), Expect = 1e-005
Identities = 102/127 (80%)
Strand = Plus / Plus
Query: 89 agttctacctgcggtactacgtggggcacaagggcaagttcgggcacgagttcctcgagt 148
||||||| || || |||||||| || |||| || || ||||| ||||| ||| | || |
Sbjct: 7 agttctatcttcgttactacgttggtcacagaggtaaattcggtcacgaattcttggaat 66
Query: 149 tcgagttccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgaca 208
|||||||||| || || || || ||||| || || |||||||| || ||||| |||||||
Sbjct: 67 tcgagttccggcctgatggaaaactccgatatgcaaacaactctaattacaaaaacgaca 126
Query: 209 ccatgat 215
|||||||
Sbjct: 127 ccatgat 133
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 99,680
Number of Sequences: 369679
Number of extensions: 99680
Number of successful extensions: 35479
Number of sequences better than 0.5: 88
Number of HSP's better than 0.5 without gapping: 87
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 35339
Number of HSP's gapped (non-prelim): 139
length of query: 964
length of database: 203,408,664
effective HSP length: 19
effective length of query: 945
effective length of database: 196,384,763
effective search space: 185583601035
effective search space used: 185583601035
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)